Rorug04G0029400

Transmembrane protein 230-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
4141511 .. 4144974
3464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0029400.1

Sequence Viewer

Length: 690 bp
ATGTTTGGTATTTCGTACGGCGAGCTCTTCCTCTTGATCGGAGCCACCGCTGCTTTAGTCGGACCAAAAGATTTGCCTAGGATTGCAAGAACGGCGGGGCGGTTAGCGGGTCGGTCAATCGGGTATGTCCAGTTAGCTCGGGGCCAATTCGACAATGTAATGCAGCAATCGCAGGCTCGCCAGGTTCAAAAGGAACTTCAAGATGCGCTTGCACAGTTAGATTCGATTCGTTATGAAGTACGAAGTCTGTCGCTTATAAACCCCGGTCCTATGACTCGAAAGCTGATGGCAAATGCTGAGGAACTAGCCGCTCCACGTAATGGGGCCGACAGTTCAATCGAGAATACTAAGGAGGAAGTGAAGTTGACGACTAGTGTGACCAAGGATAATATTAACTTCAGAACATCAGAATCACTTAATTTGCATACACAAGCCACTGCATATGCTAAATTGGCTGAATCTGCTGCTGTGAAAACTGGCTCTTTGAAAAGTAATGAAGAGAAAGAGAGCCTTATTGATGAAAATGGCCTTTTCACTGTTCTCCCAATTTCAGCTGAAAGCACCGGAATGCTACCAAAACGCAAGGAAAACGTTGAAGGATCAGACATTGTGTTGGAAGCAGTGCTTGAAGCAGAGGTAGCACGTAACGCCAAAGATTTCTTTTCACAGCCTGAAAATCAAATACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

229

Amino Acids

24.95

Weight (kDa)

5.29

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 257
AccB7I CCANNNNNTGG 1 cut(s) 320
AccBSI CCGCTC 1 cut(s) 311
AciI CCGC 5 cut(s) 48, 95, 100, 107, 309
AclI AACGTT 1 cut(s) 591
AclWI GGATC 1 cut(s) 607
AcuI CTGAAG 1 cut(s) 382
AfaI GTAC 2 cut(s) 17, 240
AfiI CCNNNNNNNGG 1 cut(s) 320
AgsI TTSAA 6 cut(s) 188, 200, 336, 487, 596, 629
AhlI ACTAGT 1 cut(s) 371
AjnI CCWGG 1 cut(s) 180
AluBI AGCT 4 cut(s) 25, 137, 283, 554
AluI AGCT 4 cut(s) 25, 137, 283, 554
Alw21I GWGCWC 1 cut(s) 27
AlwI GGATC 1 cut(s) 607
Ama87I CYCGRG 1 cut(s) 138
AoxI GGCC 3 cut(s) 142, 324, 526
ApeKI GCWGC 3 cut(s) 50, 163, 464
AspA2I CCTAGG 1 cut(s) 77
AspLEI GCGC 1 cut(s) 208
AspS9I GGNCC 4 cut(s) 62, 142, 266, 324
AsuC2I CCSGG 1 cut(s) 264
AvaI CYCGRG 1 cut(s) 138
AvaII GGWCC 2 cut(s) 62, 266
AvrII CCTAGG 1 cut(s) 77
BanII GRGCYC 1 cut(s) 27
Bbv12I GWGCWC 1 cut(s) 27
BbvCI CCTCAGC 1 cut(s) 297
BbvI GCAGC 3 cut(s) 37, 175, 451
BccI CCATC 1 cut(s) 280
BceAI ACGGC 2 cut(s) 34, 108
BciT130I CCWGG 1 cut(s) 182
BcnI CCSGG 1 cut(s) 264
BcuI ACTAGT 1 cut(s) 371
BfaI CTAG 3 cut(s) 78, 305, 372
BisI GCNGC 4 cut(s) 51, 164, 309, 465
BlnI CCTAGG 1 cut(s) 77
BlsI GCNGC 4 cut(s) 52, 165, 310, 466
Bme1390I CCNGG 2 cut(s) 182, 264
Bme18I GGWCC 2 cut(s) 62, 266
BmeT110I CYCGRG 1 cut(s) 138
BmgT120I GGNCC 4 cut(s) 62, 142, 266, 324
BmiI GGNNCC 3 cut(s) 43, 143, 325
BmrFI CCNGG 2 cut(s) 182, 264
BmsI GCATC 1 cut(s) 193
Bpu10I CCTNAGC 1 cut(s) 297
BpuMI CCSGG 1 cut(s) 264
BsaAI YACGTR 2 cut(s) 317, 644
BsaJI CCNNGG 3 cut(s) 77, 262, 381
BsaWI WCCGGW 1 cut(s) 563
Bsc4I CCNNNNNNNGG 1 cut(s) 320
Bse1I ACTGG 2 cut(s) 130, 481
BseBI CCWGG 1 cut(s) 182
BseDI CCNNGG 3 cut(s) 77, 262, 381
BseLI CCNNNNNNNGG 1 cut(s) 320
BseMII CTCAG 1 cut(s) 288
BseNI ACTGG 2 cut(s) 130, 481
BseXI GCAGC 3 cut(s) 37, 175, 451
BshFI GGCC 3 cut(s) 144, 326, 528
BsiHKAI GWGCWC 1 cut(s) 27
BsiHKCI CYCGRG 1 cut(s) 138
BsiSI CCGG 2 cut(s) 264, 564
BsiWI CGTACG 1 cut(s) 15
BslI CCNNNNNNNGG 1 cut(s) 320
BsmI GAATGC 1 cut(s) 573
BsnI GGCC 3 cut(s) 144, 326, 528
BsoBI CYCGRG 1 cut(s) 138
Bsp1286I GDGCHC 1 cut(s) 27
Bsp143I GATC 2 cut(s) 36, 599
BspACI CCGC 5 cut(s) 48, 95, 100, 107, 309
BspANI GGCC 3 cut(s) 144, 326, 528
BspCNI CTCAG 1 cut(s) 289
BspLI GGNNCC 3 cut(s) 43, 143, 325
BspPI GGATC 1 cut(s) 607
BspQI GCTCTTC 1 cut(s) 32
BsrBI CCGCTC 1 cut(s) 311
BsrI ACTGG 2 cut(s) 130, 481
BssECI CCNNGG 3 cut(s) 77, 262, 381
BssMI GATC 2 cut(s) 36, 599
BssT1I CCWWGG 2 cut(s) 77, 381
Bst2UI CCWGG 1 cut(s) 182
Bst4CI ACNGT 3 cut(s) 216, 332, 538
Bst6I CTCTTC 2 cut(s) 32, 492
BstBAI YACGTR 2 cut(s) 317, 644
BstC8I GCNNGC 4 cut(s) 23, 174, 178, 210
BstDEI CTNAG 2 cut(s) 297, 348
BstHHI GCGC 1 cut(s) 208
BstKTI GATC 2 cut(s) 39, 602
BstMBI GATC 2 cut(s) 36, 599
BstMWI GCNNNNNNNGC 7 cut(s) 50, 92, 169, 452, 461, 638, 647
BstNI CCWGG 1 cut(s) 182
BstSCI CCNGG 2 cut(s) 180, 262
BstV1I GCAGC 3 cut(s) 37, 175, 451
BsuRI GGCC 3 cut(s) 144, 326, 528
BtsI GCAGTG 2 cut(s) 435, 627
BtsIMutI CAGTG 3 cut(s) 435, 534, 627
Cac8I GCNNGC 4 cut(s) 23, 174, 178, 210
CfoI GCGC 1 cut(s) 208
Cfr13I GGNCC 4 cut(s) 62, 142, 266, 324
Csp6I GTAC 2 cut(s) 16, 239
CviQI GTAC 2 cut(s) 16, 239
DdeI CTNAG 2 cut(s) 297, 348
DpnI GATC 2 cut(s) 38, 601
DpnII GATC 2 cut(s) 36, 599
Eam1104I CTCTTC 2 cut(s) 32, 492
EarI CTCTTC 2 cut(s) 32, 492
Ecl136II GAGCTC 1 cut(s) 25
Eco130I CCWWGG 2 cut(s) 77, 381
Eco24I GRGCYC 1 cut(s) 27
Eco47I GGWCC 2 cut(s) 62, 266
Eco53kI GAGCTC 1 cut(s) 25
Eco57I CTGAAG 1 cut(s) 382
Eco88I CYCGRG 1 cut(s) 138
EcoICRI GAGCTC 1 cut(s) 25
EcoRII CCWGG 1 cut(s) 180
EcoT14I CCWWGG 2 cut(s) 77, 381
EcoT38I GRGCYC 1 cut(s) 27
ErhI CCWWGG 2 cut(s) 77, 381
FaiI YATR 7 cut(s) 126, 234, 257, 272, 426, 442, 444
FalI AAGNNNNNCTT 6 cut(s) 192, 224, 495, 527, 609, 641
FauI CCCGC 2 cut(s) 88, 100
FauNDI CATATG 1 cut(s) 442
Fnu4HI GCNGC 4 cut(s) 51, 164, 309, 465
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 4 cut(s) 51, 164, 309, 465
FspBI CTAG 3 cut(s) 78, 305, 372
GlaI GCGC 1 cut(s) 207
GluI GCNGC 4 cut(s) 51, 164, 309, 465
HaeIII GGCC 3 cut(s) 144, 326, 528
HapII CCGG 2 cut(s) 264, 564
HhaI GCGC 1 cut(s) 208
Hin6I GCGC 1 cut(s) 206
HinP1I GCGC 1 cut(s) 206
HincII GTYRAC 1 cut(s) 366
HindII GTYRAC 1 cut(s) 366
HinfI GANTC 5 cut(s) 221, 226, 274, 410, 458
HpaII CCGG 2 cut(s) 264, 564
Hpy166II GTNNAC 1 cut(s) 366
Hpy188I TCNGA 5 cut(s) 41, 62, 401, 409, 604
Hpy188III TCNNGA 3 cut(s) 34, 200, 340
Hpy8I GTNNAC 1 cut(s) 366
HpyAV CCTTC 1 cut(s) 590
HpyCH4III ACNGT 3 cut(s) 216, 332, 538
HpyCH4IV ACGT 3 cut(s) 316, 591, 643
HpyCH4V TGCA 5 cut(s) 86, 163, 212, 424, 440
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 92, 169, 452, 461, 638, 647
HpyF3I CTNAG 2 cut(s) 297, 348
HpySE526I ACGT 3 cut(s) 316, 591, 643
HspAI GCGC 1 cut(s) 206
Kzo9I GATC 2 cut(s) 36, 599
LguI GCTCTTC 1 cut(s) 32
LmnI GCTCC 2 cut(s) 41, 316
LpnPI CCDG 8 cut(s) 143, 158, 167, 194, 277, 462, 577, 684
Lsp1109I GCAGC 3 cut(s) 37, 175, 451
LweI GCATC 1 cut(s) 193
MaeI CTAG 3 cut(s) 78, 305, 372
MaeII ACGT 3 cut(s) 316, 591, 643
MaeIII GTNAC 2 cut(s) 376, 644
MalI GATC 2 cut(s) 38, 601
MbiI CCGCTC 1 cut(s) 311
MboI GATC 2 cut(s) 36, 599
MboII GAAGA 2 cut(s) 19, 509
MhlI GDGCHC 1 cut(s) 27
MluCI AATT 4 cut(s) 146, 418, 449, 546
MlyI GAGTC 1 cut(s) 268
MmeI TCCRAC 2 cut(s) 40, 594
MnlI CCTC 4 cut(s) 41, 292, 346, 628
MseI TTAA 2 cut(s) 393, 417
MslI CAYNNNNRTG 1 cut(s) 566
MspA1I CMGCKG 2 cut(s) 50, 554
MspI CCGG 2 cut(s) 264, 564
MspR9I CCNGG 2 cut(s) 182, 264
Mva1269I GAATGC 1 cut(s) 573
MvaI CCWGG 1 cut(s) 182
MwoI GCNNNNNNNGC 7 cut(s) 50, 92, 169, 452, 461, 638, 647
NciI CCSGG 1 cut(s) 264
NdeI CATATG 1 cut(s) 442
NdeII GATC 2 cut(s) 36, 599
NlaIV GGNNCC 3 cut(s) 43, 143, 325
NmuCI GTSAC 1 cut(s) 376
PciSI GCTCTTC 1 cut(s) 32
PctI GAATGC 1 cut(s) 573
PfeI GAWTC 4 cut(s) 221, 226, 410, 458
Pfl23II CGTACG 1 cut(s) 15
PflMI CCANNNNNTGG 1 cut(s) 320
PkrI GCNGC 4 cut(s) 52, 165, 310, 466
PleI GAGTC 1 cut(s) 268
PpsI GAGTC 1 cut(s) 268
Ppu21I YACGTR 2 cut(s) 317, 644
PsiI TTATAA 1 cut(s) 257
Psp124BI GAGCTC 1 cut(s) 27
Psp1406I AACGTT 1 cut(s) 591
Psp6I CCWGG 1 cut(s) 180
PspGI CCWGG 1 cut(s) 180
PspLI CGTACG 1 cut(s) 15
PspN4I GGNNCC 3 cut(s) 43, 143, 325
PspPI GGNCC 4 cut(s) 62, 142, 266, 324
PvuII CAGCTG 1 cut(s) 554
RsaI GTAC 2 cut(s) 17, 240
RsaNI GTAC 2 cut(s) 16, 239
RseI CAYNNNNRTG 1 cut(s) 566
SacI GAGCTC 1 cut(s) 27
SapI GCTCTTC 1 cut(s) 32
SaqAI TTAA 2 cut(s) 393, 417
SatI GCNGC 4 cut(s) 51, 164, 309, 465
Sau3AI GATC 2 cut(s) 36, 599
Sau96I GGNCC 4 cut(s) 62, 142, 266, 324
SchI GAGTC 1 cut(s) 268
ScrFI CCNGG 2 cut(s) 182, 264
SduI GDGCHC 1 cut(s) 27
SetI ASST 9 cut(s) 27, 139, 186, 285, 319, 556, 594, 639, 646
SfaNI GCATC 1 cut(s) 193
SinI GGWCC 2 cut(s) 62, 266
SmiMI CAYNNNNRTG 1 cut(s) 566
SpeI ACTAGT 1 cut(s) 371
Sse9I AATT 4 cut(s) 146, 418, 449, 546
SsiI CCGC 5 cut(s) 48, 95, 100, 107, 309
SspI AATATT 1 cut(s) 391
SspMI CTAG 3 cut(s) 78, 305, 372
SstI GAGCTC 1 cut(s) 27
StyD4I CCNGG 2 cut(s) 180, 262
StyI CCWWGG 2 cut(s) 77, 381
TaaI ACNGT 3 cut(s) 216, 332, 538
TaiI ACGT 3 cut(s) 319, 594, 646
TaqI TCGA 4 cut(s) 150, 224, 277, 339
TaqII GACCGA 1 cut(s) 102
TasI AATT 4 cut(s) 146, 418, 449, 546
TauI GCSGC 1 cut(s) 311
TfiI GAWTC 4 cut(s) 221, 226, 410, 458
Tru1I TTAA 2 cut(s) 393, 417
Tru9I TTAA 2 cut(s) 393, 417
TscAI CASTG 3 cut(s) 442, 541, 627
TseFI GTSAC 1 cut(s) 376
TseI GCWGC 3 cut(s) 50, 163, 464
Tsp45I GTSAC 1 cut(s) 376
TspDTI ATGAA 3 cut(s) 249, 510, 534
TspRI CASTG 3 cut(s) 442, 541, 627
Van91I CCANNNNNTGG 1 cut(s) 320
VpaK11BI GGWCC 2 cut(s) 62, 266
XmaJI CCTAGG 1 cut(s) 77
XspI CTAG 3 cut(s) 78, 305, 372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.