MD03G1017800.v1.1

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
1385681 .. 1387945
2265 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1017800.v1.1.491

Sequence Viewer

Length: 2265 bp
ATGAGTGTATATATACACCCGAAACGACGTGAGCAATATAACCCCGGTACAGCCATAGCGAAAAACGCCATGCCGGAACCTAGTCATATAATGCCTTGTGGAGTCCTCTTCCTGTTTTTTGTGTTCTCTACTTTCATTTCTACAAACGATGCTTGCAACAAGGCAGATCACAACTCTCTTTTGTCATCTTTCAATATGTCTTCTTCTCATTTAAATTGGTCTTCCAGTGATTGTTGTCACTGGGAAGGCATCGCTTGTGATGCCAATGGTAGGGTAACACATGTTTTGTTGCCCTCTAAACGGCTCCAAGGAGGCATTTCTTGCTCTCTTGGAAACCTCACACATCTTTCGCACCTCAATCTCTCCCACAATCTGCTTTCCGGTCCTTTTGAAGCTGGACTTCTGTTGTCCTTGAGTCGCCTTGAAATCCTTGATTTGAGCTATAACCTTCTCTCCGGAGAAGTCCCATTGTTTCTATCATCTAGTTACATTCAAATAGTGGATTTGTCGAACAATCAATTCAATGGAACAATTCCATCTTCATTCCTCCAGCATGCCTGGAGTTTGAGCAGCTTGAATGTCAGTAAAAATCATTTTACTGGCAAATTACCTTCCTCTATTTGTCTTCGTTCCTCTTCGGTCAGAGTCTTGGATTTCTCCCACAACGATTTCAATGGCTCAATTCCTCTCGGACTAGGAAACTGTTTGAAATTGGAAATCTTTCGTGCGGGCTTTAATACTCTCTCTGGGACTCTTCCTAGTGATCTCTTCAAAGCTCAAGCGCTTCACGAAATTTCGTTACCTTCCAATCAGCTTTTTGGTCACATTAGTGACAACATTGTCAATCTCACCAGCCTCACAATCCTAGAGATTTACTTCAATCATTTGAGTGGCGCACTTCCTCTCCATATCGAGAAGCTCTCCAAATTAAAACTCATGCTCCTTCATTTCAACAATCTTGAAGGTCCGCTGCCCCCATCTTTGATGAATTGCACAAACCTTATCGAACTCAATCTTGGATTCAACCATTTGGATGGAAATATCTCGGAGCTGAATTTTTCGAAACTTGATCAACTTATCAAGCTTGATCTCGGGAGTAATTACTTCTCCGGTGTCATGCCAAAAAGCCTTTACTCATGCAAGTTTCTGAAAGCAGTTCGCCTGAGCGGTAATAATCTAGAGGGACAGATACAGCCTGAGATTGTTTCGTTGAAATACCTATCCTTCCTCTCGCTTGGTAGCAACAGACTTACCAATGTCACCGGCGCTCTGCATTTATTGATGCGTTTCGAAAGTCTCAGGGTGGTCATGCTTCCACATAATTTTATAGGTGAAGAACTGCCGGATGGTGATGCTATGATTGGTTCTGGGTTTCAAAATCTCCGCCTTTTTGGCATATCGAACTGCCAACTTAAAGGTCATATTCCGGTGTGGATGTCAAAGCTCAAGAAACTCGAAGCCCTTGATTTGTCTACCAACAGACTCACAGGCTCAATACCTCGTTGGTTGGGAAGTCTTCCCAGTCTTTTCTTCATAAGCTTGAACAACAACTCGCTTTCGGGGGGACTTCCAAAGGAGCTTTTCTCACTACAAGCTCTTGTATCCGAGAAGCCTGCCGCTCAAACAGATAGTGGTGATGTCGAACTACCTATCTACACGCAGCGAACGAATGCATCTATCACAAATCTGCAGTACAACTATGTGTCCAACTTGCCGCGAGCAATTTACATCCGGAATAACAGTCTAAGTGGCAATATTCCCATTGAGATAGGCCGGTTGCAAAACCTTCACGAGCTGGATCTCAGCGTCAACAACATCGTTGGCAGCATTCCGGACCAGGTATCTAACCTCACAAACTTGGAGAGATTAGACCTCTCAAGAAACCATCTGTCAGGCGGAATCCCAGCTTCACTATCAAGTCTTCATTTCTTGGGTTCACTCAGTGTTGCATACAATAACCTCCAAGGACAAGTACCGTTAGGCACTCAGATCCAAGGCTTCAATGCCACTGCCTTTGAGGGCAACCCGGGACTTTGCGGTTTCCCGCTTCCAAACAAATGCCAGCAGAACACAAGTGATAATGCAACTAAGAACATGGAAGATGTGCATGGCAATGGGAATGATATTCCATGGTTTTATATTTCAGTTGCTCTTGGTTTCATTGTAGGATTTTGGGGAGTTTGTGGCTCTTTGGCTTTGATCACGTCATGGCGATATGCGTATTTCCAGTTCCTCTCCGATGTTAAAGATCGCTTCATATGTTGA

Protein Analysis

755

Amino Acids

82.87

Weight (kDa)

6.68

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 460 - 519 7.2e-08 Leucine rich repeat
LRR_14 PF23598 562 - 649 1.8e-06 Leucine-rich repeat region
LRR_8 PF13855 595 - 654 3.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 839
AccBSI CCGCTC 2 cut(s) 1167, 1619
AccI GTMKAC 1 cut(s) 1472
AccII CGCG 1 cut(s) 1717
AccIII TCCGGA 3 cut(s) 455, 1731, 1831
AciI CCGC 9 cut(s) 728, 968, 1167, 1384, 1617, 1715, 1896, 2037, 2045
AclWI GGATC 2 cut(s) 1806, 1984
AcsI RAATTY 2 cut(s) 792, 1054
AdeI CACNNNGTG 1 cut(s) 1943
AfaI GTAC 3 cut(s) 49, 1694, 1974
AfeI AGCGCT 1 cut(s) 783
AfiI CCNNNNNNNGG 2 cut(s) 270, 300
AflIII ACRYGT 1 cut(s) 280
AjiI CACGTC 2 cut(s) 29, 2205
AjnI CCWGG 2 cut(s) 557, 1836
AjuI GAANNNNNNNTTGG 2 cut(s) 999, 1031
AleI CACNNNNGTG 1 cut(s) 828
Alw26I GTCTC 1 cut(s) 1301
AlwI GGATC 2 cut(s) 1806, 1984
Ama87I CYCGRG 2 cut(s) 1091, 2026
Aor13HI TCCGGA 3 cut(s) 455, 1731, 1831
Aor51HI AGCGCT 1 cut(s) 783
AoxI GGCC 1 cut(s) 1771
ApeKI GCWGC 4 cut(s) 570, 970, 1660, 1824
ApoI RAATTY 2 cut(s) 792, 1054
Asp700I GAANNNNTTC 1 cut(s) 720
AspLEI GCGC 3 cut(s) 784, 896, 1268
AspS9I GGNCC 3 cut(s) 383, 965, 1834
AsuC2I CCSGG 3 cut(s) 45, 2027, 2028
AsuHPI GGTGA 5 cut(s) 841, 1252, 1343, 1361, 1646
AsuII TTCGAA 2 cut(s) 1061, 1290
AvaI CYCGRG 2 cut(s) 1091, 2026
AvaII GGWCC 3 cut(s) 383, 965, 1834
BauI CACGAG 1 cut(s) 1790
BbsI GAAGAC 5 cut(s) 192, 213, 617, 1508, 1913
BbvI GCAGC 4 cut(s) 582, 957, 1672, 1836
BccI CCATC 5 cut(s) 544, 985, 1028, 1340, 1893
BceAI ACGGC 1 cut(s) 317
BcgI CGANNNNNNTGC 2 cut(s) 1595, 1629
BciT130I CCWGG 2 cut(s) 559, 1838
BciVI GTATCC 1 cut(s) 1612
BclI TGATCA 2 cut(s) 1069, 2199
BcnI CCSGG 3 cut(s) 45, 2027, 2028
BcoDI GTCTC 1 cut(s) 1301
BfaI CTAG 6 cut(s) 81, 483, 695, 759, 866, 1178
BfmI CTRYAG 1 cut(s) 1688
BfoI RGCGCY 2 cut(s) 785, 1269
BfuI GTATCC 1 cut(s) 1612
BglI GCCNNNNNGGC 1 cut(s) 1392
BisI GCNGC 6 cut(s) 571, 971, 1617, 1661, 1715, 1825
BlsI GCNGC 6 cut(s) 572, 972, 1618, 1662, 1716, 1826
Bme1390I CCNGG 5 cut(s) 45, 559, 1838, 2027, 2028
Bme18I GGWCC 3 cut(s) 383, 965, 1834
BmeT110I CYCGRG 2 cut(s) 1091, 2026
BmgBI CACGTC 2 cut(s) 29, 2205
BmgT120I GGNCC 3 cut(s) 383, 965, 1834
BmiI GGNNCC 2 cut(s) 78, 305
BmrFI CCNGG 5 cut(s) 45, 559, 1838, 2027, 2028
BmrI ACTGGG 2 cut(s) 250, 1515
BmsI GCATC 6 cut(s) 139, 250, 258, 1272, 1342, 1682
BmuI ACTGGG 2 cut(s) 250, 1515
BpiI GAAGAC 5 cut(s) 192, 213, 617, 1508, 1913
BplI GAGNNNNNCTC 4 cut(s) 905, 937, 1568, 1600
BpmI CTGGAG 2 cut(s) 533, 580
Bpu10I CCTNAGC 1 cut(s) 1163
Bpu14I TTCGAA 2 cut(s) 1061, 1290
BpuEI CTTGAG 4 cut(s) 433, 762, 1430, 1861
BpuMI CCSGG 3 cut(s) 45, 2027, 2028
BsaJI CCNNGG 6 cut(s) 43, 307, 1963, 1993, 2026, 2129
BsaWI WCCGGW 6 cut(s) 380, 455, 1109, 1426, 1731, 1831
BsaXI ACNNNNNCTCC 6 cut(s) 437, 467, 888, 918, 924, 954
Bsc4I CCNNNNNNNGG 2 cut(s) 270, 300
Bse118I RCCGGY 2 cut(s) 1262, 1773
Bse1I ACTGG 5 cut(s) 225, 245, 604, 1521, 2227
Bse3DI GCAATG 1 cut(s) 2119
BseAI TCCGGA 3 cut(s) 455, 1731, 1831
BseBI CCWGG 2 cut(s) 559, 1838
BseDI CCNNGG 6 cut(s) 43, 307, 1963, 1993, 2026, 2129
BseGI GGATG 4 cut(s) 1039, 1351, 1440, 1728
BseLI CCNNNNNNNGG 2 cut(s) 270, 300
BseMI GCAATG 1 cut(s) 2119
BseMII CTCAG 6 cut(s) 1154, 1188, 1312, 1816, 1954, 2000
BseNI ACTGG 5 cut(s) 225, 245, 604, 1521, 2227
BseXI GCAGC 4 cut(s) 582, 957, 1672, 1836
BseYI CCCAGC 1 cut(s) 1903
Bsh1236I CGCG 1 cut(s) 1717
BshFI GGCC 1 cut(s) 1773
BsiHKCI CYCGRG 2 cut(s) 1091, 2026
BslFI GGGAC 5 cut(s) 449, 763, 1197, 1578, 2043
BslI CCNNNNNNNGG 2 cut(s) 270, 300
BsmAI GTCTC 1 cut(s) 1301
BsmFI GGGAC 5 cut(s) 449, 763, 1197, 1578, 2043
BsmI GAATGC 2 cut(s) 1675, 1827
BsnI GGCC 1 cut(s) 1773
BsoBI CYCGRG 2 cut(s) 1091, 2026
Bsp119I TTCGAA 2 cut(s) 1061, 1290
Bsp13I TCCGGA 3 cut(s) 455, 1731, 1831
Bsp143I GATC 8 cut(s) 166, 763, 1069, 1087, 1798, 1989, 2199, 2248
Bsp19I CCATGG 1 cut(s) 2129
BspACI CCGC 9 cut(s) 728, 968, 1167, 1384, 1617, 1715, 1896, 2037, 2045
BspANI GGCC 1 cut(s) 1773
BspCNI CTCAG 6 cut(s) 1155, 1189, 1311, 1815, 1953, 1999
BspEI TCCGGA 3 cut(s) 455, 1731, 1831
BspFNI CGCG 1 cut(s) 1717
BspLI GGNNCC 2 cut(s) 78, 305
BspMAI CTGCAG 1 cut(s) 1692
BspPI GGATC 2 cut(s) 1806, 1984
BspT104I TTCGAA 2 cut(s) 1061, 1290
BsrBI CCGCTC 2 cut(s) 1167, 1619
BsrDI GCAATG 1 cut(s) 2119
BsrFI RCCGGY 2 cut(s) 1262, 1773
BsrI ACTGG 5 cut(s) 225, 245, 604, 1521, 2227
BssAI RCCGGY 2 cut(s) 1262, 1773
BssECI CCNNGG 6 cut(s) 43, 307, 1963, 1993, 2026, 2129
BssMI GATC 8 cut(s) 166, 763, 1069, 1087, 1798, 1989, 2199, 2248
BssSI CACGAG 1 cut(s) 1790
BssT1I CCWWGG 4 cut(s) 307, 1963, 1993, 2129
Bst2BI CACGAG 1 cut(s) 1790
Bst2UI CCWGG 2 cut(s) 559, 1838
Bst4CI ACNGT 3 cut(s) 704, 1742, 1977
Bst6I CTCTTC 4 cut(s) 113, 640, 759, 773
BstAPI GCANNNNNTGC 1 cut(s) 321
BstBI TTCGAA 2 cut(s) 1061, 1290
BstC8I GCNNGC 6 cut(s) 154, 555, 730, 1614, 1719, 2063
BstDEI CTNAG 8 cut(s) 1163, 1197, 1298, 1745, 1802, 1940, 1986, 2088
BstDSI CCRYGG 1 cut(s) 2129
BstF5I GGATG 4 cut(s) 1039, 1351, 1440, 1728
BstFNI CGCG 1 cut(s) 1717
BstH2I RGCGCY 2 cut(s) 785, 1269
BstHHI GCGC 3 cut(s) 784, 896, 1268
BstKTI GATC 8 cut(s) 169, 766, 1072, 1090, 1801, 1992, 2202, 2251
BstMAI GTCTC 1 cut(s) 1301
BstMBI GATC 8 cut(s) 166, 763, 1069, 1087, 1798, 1989, 2199, 2248
BstMWI GCNNNNNNNGC 4 cut(s) 65, 260, 321, 1392
BstNI CCWGG 2 cut(s) 559, 1838
BstNSI RCATGY 2 cut(s) 284, 557
BstSCI CCNGG 5 cut(s) 43, 557, 1836, 2025, 2026
BstSFI CTRYAG 1 cut(s) 1688
BstUI CGCG 1 cut(s) 1717
BstV1I GCAGC 4 cut(s) 582, 957, 1672, 1836
BstV2I GAAGAC 5 cut(s) 192, 213, 617, 1508, 1913
BstX2I RGATCY 2 cut(s) 1798, 1989
BstXI CCANNNNNNTGG 1 cut(s) 1034
BstYI RGATCY 2 cut(s) 1798, 1989
BsuI GTATCC 1 cut(s) 1612
BsuRI GGCC 1 cut(s) 1773
BtgI CCRYGG 1 cut(s) 2129
BtgZI GCGATG 1 cut(s) 235
BtrI CACGTC 2 cut(s) 29, 2205
BtsCI GGATG 4 cut(s) 1039, 1351, 1440, 1728
BtsI GCAGTG 1 cut(s) 2007
BtsIMutI CAGTG 4 cut(s) 232, 238, 1948, 2007
Cac8I GCNNGC 6 cut(s) 154, 555, 730, 1614, 1719, 2063
CfoI GCGC 3 cut(s) 784, 896, 1268
Cfr10I RCCGGY 2 cut(s) 1262, 1773
Cfr13I GGNCC 3 cut(s) 383, 965, 1834
Cfr9I CCCGGG 1 cut(s) 2026
CseI GACGC 1 cut(s) 1795
CsiI ACCWGGT 1 cut(s) 1836
Csp6I GTAC 3 cut(s) 48, 1693, 1973
CspCI CAANNNNNGTGG 2 cut(s) 1996, 2031
CviQI GTAC 3 cut(s) 48, 1693, 1973
DdeI CTNAG 8 cut(s) 1163, 1197, 1298, 1745, 1802, 1940, 1986, 2088
DpnI GATC 8 cut(s) 168, 765, 1071, 1089, 1800, 1991, 2201, 2250
DpnII GATC 8 cut(s) 166, 763, 1069, 1087, 1798, 1989, 2199, 2248
DraI TTTAAA 1 cut(s) 213
DraIII CACNNNGTG 1 cut(s) 1943
DrdI GACNNNNNNGTC 1 cut(s) 839
DseDI GACNNNNNNGTC 1 cut(s) 839
Eam1104I CTCTTC 4 cut(s) 113, 640, 759, 773
EarI CTCTTC 4 cut(s) 113, 640, 759, 773
EciI GGCGGA 2 cut(s) 1373, 1911
Eco130I CCWWGG 4 cut(s) 307, 1963, 1993, 2129
Eco47I GGWCC 3 cut(s) 383, 965, 1834
Eco47III AGCGCT 1 cut(s) 783
Eco88I CYCGRG 2 cut(s) 1091, 2026
EcoRII CCWGG 2 cut(s) 557, 1836
EcoT14I CCWWGG 4 cut(s) 307, 1963, 1993, 2129
EcoT22I ATGCAT 1 cut(s) 1675
ErhI CCWWGG 4 cut(s) 307, 1963, 1993, 2129
FalI AAGNNNNNCTT 2 cut(s) 384, 416
FaqI GGGAC 5 cut(s) 449, 763, 1197, 1578, 2043
FauI CCCGC 2 cut(s) 721, 2052
FauNDI CATATG 1 cut(s) 2258
FbaI TGATCA 2 cut(s) 1069, 2199
FblI GTMKAC 1 cut(s) 1472
Fnu4HI GCNGC 6 cut(s) 571, 971, 1617, 1661, 1715, 1825
FokI GGATG 4 cut(s) 1046, 1358, 1447, 1715
Fsp4HI GCNGC 6 cut(s) 571, 971, 1617, 1661, 1715, 1825
FspBI CTAG 6 cut(s) 81, 483, 695, 759, 866, 1178
GlaI GCGC 3 cut(s) 783, 895, 1267
GluI GCNGC 6 cut(s) 571, 971, 1617, 1661, 1715, 1825
GsaI CCCAGC 1 cut(s) 1907
GsuI CTGGAG 2 cut(s) 533, 580
HaeII RGCGCY 2 cut(s) 785, 1269
HaeIII GGCC 1 cut(s) 1773
HgaI GACGC 1 cut(s) 1795
HhaI GCGC 3 cut(s) 784, 896, 1268
Hin6I GCGC 3 cut(s) 782, 894, 1266
HinP1I GCGC 3 cut(s) 782, 894, 1266
HincII GTYRAC 1 cut(s) 1810
HindII GTYRAC 1 cut(s) 1810
HindIII AAGCTT 2 cut(s) 1082, 1537
HinfI GANTC 7 cut(s) 102, 415, 645, 751, 1020, 1482, 1899
HphI GGTGA 5 cut(s) 841, 1252, 1343, 1361, 1646
Hpy166II GTNNAC 3 cut(s) 1473, 1810, 1937
Hpy188I TCNGA 7 cut(s) 644, 692, 1048, 1149, 1606, 1989, 2239
Hpy8I GTNNAC 3 cut(s) 1473, 1810, 1937
Hpy99I CGWCG 1 cut(s) 30
HpyAV CCTTC 8 cut(s) 239, 458, 621, 813, 953, 956, 1234, 1796
HpyCH4III ACNGT 3 cut(s) 704, 1742, 1977
HpyCH4IV ACGT 2 cut(s) 28, 2204
HpyF10VI GCNNNNNNNGC 4 cut(s) 65, 260, 321, 1392
HpyF3I CTNAG 8 cut(s) 1163, 1197, 1298, 1745, 1802, 1940, 1986, 2088
HpySE526I ACGT 2 cut(s) 28, 2204
HspAI GCGC 3 cut(s) 782, 894, 1266
Kpn2I TCCGGA 3 cut(s) 455, 1731, 1831
Ksp22I TGATCA 2 cut(s) 1069, 2199
Kzo9I GATC 8 cut(s) 166, 763, 1069, 1087, 1798, 1989, 2199, 2248
LmnI GCTCC 4 cut(s) 309, 945, 1048, 1576
Lsp1109I GCAGC 4 cut(s) 582, 957, 1672, 1836
LweI GCATC 6 cut(s) 139, 250, 258, 1272, 1342, 1682
MabI ACCWGGT 1 cut(s) 1836
MaeI CTAG 6 cut(s) 81, 483, 695, 759, 866, 1178
MaeII ACGT 2 cut(s) 28, 2204
MaeIII GTNAC 7 cut(s) 236, 274, 485, 798, 821, 830, 1258
MalI GATC 8 cut(s) 168, 765, 1071, 1089, 1800, 1991, 2201, 2250
MbiI CCGCTC 2 cut(s) 1167, 1619
MboI GATC 8 cut(s) 166, 763, 1069, 1087, 1798, 1989, 2199, 2248
MflI RGATCY 2 cut(s) 1798, 1989
MlyI GAGTC 5 cut(s) 111, 424, 654, 745, 1476
MmeI TCCRAC 1 cut(s) 1731
Mph1103I ATGCAT 1 cut(s) 1675
MroI TCCGGA 3 cut(s) 455, 1731, 1831
MroXI GAANNNNTTC 1 cut(s) 720
MseI TTAA 5 cut(s) 212, 735, 929, 1413, 2244
MslI CAYNNNNRTG 4 cut(s) 828, 888, 1032, 2112
MspA1I CMGCKG 1 cut(s) 970
MspR9I CCNGG 5 cut(s) 45, 559, 1838, 2027, 2028
Mva1269I GAATGC 2 cut(s) 1675, 1827
MvaI CCWGG 2 cut(s) 559, 1838
MvnI CGCG 1 cut(s) 1717
MwoI GCNNNNNNNGC 4 cut(s) 65, 260, 321, 1392
NciI CCSGG 3 cut(s) 45, 2027, 2028
NcoI CCATGG 1 cut(s) 2129
NdeI CATATG 1 cut(s) 2258
NdeII GATC 8 cut(s) 166, 763, 1069, 1087, 1798, 1989, 2199, 2248
NlaIV GGNNCC 2 cut(s) 78, 305
NmuCI GTSAC 4 cut(s) 236, 821, 830, 1258
NsiI ATGCAT 1 cut(s) 1675
NspI RCATGY 2 cut(s) 284, 557
NspV TTCGAA 2 cut(s) 1061, 1290
OliI CACNNNNGTG 1 cut(s) 828
PaeI GCATGC 1 cut(s) 557
PciI ACATGT 1 cut(s) 280
PcsI WCGNNNNNNNCGW 1 cut(s) 1664
PctI GAATGC 2 cut(s) 1675, 1827
PdmI GAANNNNTTC 1 cut(s) 720
PfeI GAWTC 2 cut(s) 1020, 1899
PkrI GCNGC 6 cut(s) 572, 972, 1618, 1662, 1716, 1826
PleI GAGTC 5 cut(s) 110, 423, 653, 745, 1476
PpsI GAGTC 5 cut(s) 110, 423, 653, 745, 1476
PscI ACATGT 1 cut(s) 280
Psp6I CCWGG 2 cut(s) 557, 1836
PspFI CCCAGC 1 cut(s) 1903
PspGI CCWGG 2 cut(s) 557, 1836
PspN4I GGNNCC 2 cut(s) 78, 305
PspPI GGNCC 3 cut(s) 383, 965, 1834
PsrI GAACNNNNNNTAC 2 cut(s) 2213, 2245
PstI CTGCAG 1 cut(s) 1692
PsuI RGATCY 2 cut(s) 1798, 1989
RsaI GTAC 3 cut(s) 49, 1694, 1974
RsaNI GTAC 3 cut(s) 48, 1693, 1973
RseI CAYNNNNRTG 4 cut(s) 828, 888, 1032, 2112
SaqAI TTAA 5 cut(s) 212, 735, 929, 1413, 2244
SatI GCNGC 6 cut(s) 571, 971, 1617, 1661, 1715, 1825
Sau3AI GATC 8 cut(s) 166, 763, 1069, 1087, 1798, 1989, 2199, 2248
Sau96I GGNCC 3 cut(s) 383, 965, 1834
SchI GAGTC 5 cut(s) 111, 424, 654, 745, 1476
ScrFI CCNGG 5 cut(s) 45, 559, 1838, 2027, 2028
SexAI ACCWGGT 1 cut(s) 1836
SfaNI GCATC 6 cut(s) 139, 250, 258, 1272, 1342, 1682
SfcI CTRYAG 1 cut(s) 1688
SfuI TTCGAA 2 cut(s) 1061, 1290
SgrAI CRCCGGYG 1 cut(s) 1262
SinI GGWCC 3 cut(s) 383, 965, 1834
SmaI CCCGGG 1 cut(s) 2028
SmiI ATTTAAAT 1 cut(s) 213
SmiMI CAYNNNNRTG 4 cut(s) 828, 888, 1032, 2112
SmlI CTYRAG 4 cut(s) 412, 777, 1445, 1876
SmoI CTYRAG 4 cut(s) 412, 777, 1445, 1876
SphI GCATGC 1 cut(s) 557
SsiI CCGC 9 cut(s) 728, 968, 1167, 1384, 1617, 1715, 1896, 2037, 2045
SspI AATATT 1 cut(s) 1756
SspMI CTAG 6 cut(s) 81, 483, 695, 759, 866, 1178
StyD4I CCNGG 5 cut(s) 43, 557, 1836, 2025, 2026
StyI CCWWGG 4 cut(s) 307, 1963, 1993, 2129
SwaI ATTTAAAT 1 cut(s) 213
TaaI ACNGT 3 cut(s) 704, 1742, 1977
TaiI ACGT 2 cut(s) 31, 2207
TaqI TCGA 8 cut(s) 509, 912, 1005, 1061, 1290, 1400, 1455, 1641
TaqII GACCGA 1 cut(s) 628
TatI WGTACW 1 cut(s) 1692
TauI GCSGC 2 cut(s) 1619, 1717
TfiI GAWTC 2 cut(s) 1020, 1899
Tru1I TTAA 5 cut(s) 212, 735, 929, 1413, 2244
Tru9I TTAA 5 cut(s) 212, 735, 929, 1413, 2244
TscAI CASTG 4 cut(s) 232, 245, 1948, 2014
TseFI GTSAC 4 cut(s) 236, 821, 830, 1258
TseI GCWGC 4 cut(s) 570, 970, 1660, 1824
Tsp45I GTSAC 4 cut(s) 236, 821, 830, 1258
TspDTI ATGAA 8 cut(s) 124, 531, 935, 1001, 1522, 1913, 2149, 2245
TspMI CCCGGG 1 cut(s) 2026
TspRI CASTG 4 cut(s) 232, 245, 1948, 2014
VpaK11BI GGWCC 3 cut(s) 383, 965, 1834
XapI RAATTY 2 cut(s) 792, 1054
XbaI TCTAGA 1 cut(s) 1177
XceI RCATGY 2 cut(s) 284, 557
XmaI CCCGGG 1 cut(s) 2026
XmiI GTMKAC 1 cut(s) 1472
XmnI GAANNNNTTC 1 cut(s) 720
XspI CTAG 6 cut(s) 81, 483, 695, 759, 866, 1178
Zsp2I ATGCAT 1 cut(s) 1675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.