Rorug01G0043700

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
7294946 .. 7418630
123685 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0043700.1

Sequence Viewer

Length: 3543 bp
ATGGCGTCAACCTCTTCTCGTCGTCAATGGAAATACGATGTGTTTCTAAGTTTCAGGGGGGGAGATACCCGCTATACTTTTACCGGTCATCTGTATAATGCACTAAAACAGAAAGGAATTCTCACCTTCATGGATGACCCAGAACTTGAGAAAGGAGAATCCATTAGACCTGAACTTTTAGGTGCAATTGAGGAGTCTAGATCTGCGATTGTCATTCTCTCATGGAACTATGCTCGTTCGTCATGGTGTTTGGATGAACTCGTCAAGATTATTCAATGCATGAAAGAGATGGGCCAACAAGTCCTCCCCGTCTTCTACTACGGCGTGGATCCTTCTGATGTGCGGCACCAAAGCGGATGGTTTGAGCTCAAAAGCAAATCCCGAGTAGATGTGGAAGTAAAGGAACATGAAGAAGTTTATGGAAAGAGTGAGGACAGACTAAATGCGTGGAGAGCTGCTTTGACACAGGTGGCCAATCTTTCTGGCTGGCATTTCAAGGTGGATTCATATGAAGCAAGAATAATTGAGGAAATTGTTAATCATATACTAAAGAAGTCCGTGTATACATCTTCAAGTGTTGACAAGGGCTTCATAGGAATGGATTCCCGCATTCATGATTTATTAAGAAATTACATAAGTCCACAGCTTGGTGGGGTCCGTTTTATAGGGATCCATGGCATGCGGGGCATAGGTAAGACAACACTTGCCCGAGCTATCTATGATGAAATTTGTCAGGATTTTGACCAAAGCTGCTTTCTTTCCAATGTTCGAGAAATGTCTAAAACCAATGGCCTAGTTTCTCTACAAGAAAAACTTCTTTCCAGAATCCTGATGGCAAAAATTGAAAATATAGAGGATGAATACACAGGAGCTGCTATGATACAAAGGCGGTTATGTAGAATAAAGATGCTGGTTGTAATTGATGATGTGGATCAGTTGACACAATTAGAGAAATTGGCTGGAAGTCTCAACTGGTTTGGTCCAGGGAGCAGAATTATCATAACCACCACAGATAATCAGTTGTTAAAGACACATGAAGTTGATGCTACATACAAGGCTAACGGCTTAAACTGTGATGAAGCACTTCAACTTTTGAGTTTGAAGGCTTTTAAGAAATGTCCCCCACCAGAAGATTATTTGCATCTGTGCTACCATATTTTAGGGTATGCTCAGGGGCTTCCGTTGGCTCTCGTGGTTTTAGGTTCTTTTCTATTTGGTAGAAGCACTGATGAATGGGCAAGTGCAATAGATAGGCTAAAGAATACACCACATAAACGCATTATTGAGGTGCTTCGGATTAGTTTTGATGGACTGGATAAAAAAGACAAAGAAATATTCCTACATATTGCTTGCTTTTACAAGGGGAATGATAAGAGTCGTGTGACACAAATACTAGACTATTGCCACCTAAACCCTGTCATTGGTTTAAGTGTTCTTGCTGATAGATCTCTCATAACTATCTTCAACAACAAACTGTCGATGCATGATTTGCTACAAGAAATGGGCTGGGAAATTGTTCGTGAAGAGTCTCCTAAAGAGCCAGGCAAACGTAGTAGATTATGGTCTCATGAAGACATCAACGATGTGCTGAAGAGAAATAAGGGAACAGATTCAATCCAAGGCATGGTAATGGAGTCGACTAAATTACAAGTGGCTCATTGGAAGCCAGAAGCCTTTTCAAATATGTCTCAACTTAGTCTTCTTCATATTCGTAATGTGGACCTTCCCAAAGGCCTCACTTGTCTTTCTAATTCCTTGAGACTCCTCGAATGGACTGGGTATCCCTTGAGATCTCTCCCACAAAATTTTGAAGCAGATGAACTTATTGAACTTAACTTGTGCCACAGCAACATTGAACAGCTTTGGAAGGGAACACATAATTTTGACAAGTTGAAGTTCATCAAACTCTGCCATTCTCAAAACATTGTGGAGACCCCAGACCTCGAAGGTGTTCAGAATCTTGAGACTTTAGATCTTGAAGGATGTTCTCATTTGGTAAGAATCCATCAATCCCTTGGATTTCTCAAAAAGCTTATTGTCCTGAATCTTAAAGACTGCAAAAGTCTCGAGAGTCTGCCAAGTAGAATTGAAATGGAATCTCTTGAAACATTAATTTTTTCTAACTGCTCAAAAGTTAAGAAGATTCCCGAGTTTGTTGGAAATATGGAACGTTTGTCGGTGCTTTATCTTGATGAGACTGCCATTGAGGAACTGCCAGTGTCAATTGAACGGCTGAGTAGCCTTGTGTCATTAAATCTGAGCAACTGCAGAAATCTTATCTGTCTTCCGAGTACCATCAATAAATTGAAGTCTATTAAAGATCTTAATCTTTCTGGATGCTCGAAACTCGGCAAACATCAGGTAAATGTGAGGGTGATGGACTGTTTTCAGGAAACTGATGTGAATAGTGGGTCTGCAATAGAAATGTCGTCTACCCATGATCGCAGGAAAAAAGGGAGAGGTCCAATCGTTCAAGGATGCAAAGTAGTTTGGCGATCTTTAAAAAAGTTCTTGCCTTCTGGATTGGTGCAAAAAGTGAATACGGAGCCAAACAGTTTCCTCTTGCCTATATCACAAAAAGTGAATACAGAGCCAATGAGTTTCCGCTTGCCTATTTCTGGTCTGTGTAATTTAACATATTTGAACTTGAGTAATTGCAATCTTGGTGAAGGAGCATTTGCCAACGAATTTGGTCACTTTCCCTCTTTGGTGATCTTGAATCTAAGTGGAAACAATTTTGTTCGTCTTCCTTCCGGCATTGGATTGCTTTCTAAGCTTGAGAACTTTAACTTGGAGAATTGCAAGAGACTTCAAGAGTTGTCAGACCTTCCATCAAATAGTAGACTAGATTTAAGGGCAGATGGTTGTACTTCGCTGAAATACTTGTTTGATGCATCAAATTTGAACAGATTAAACAAATCATATTTCAATTTCATCAATTGCTTCAATTTAAATGGCAATCAAGGATGCAATAACATAGCATTTGAATTGCTGAAGACATTCATGTATCAGGGAATCTGTAATAAGAGGGAAACTTTTCAAATTGTAATTCCTGGAAGTAATATTCATGAGTGGTTCAGCCATCAGAGTGTTGGGTGTTCATTAAGTGTATCTCTACCTGCACATTGGAATAAGAGTCGGTTTTTGGGATTTGCTTTGTGTGTTGTTTTTGTACTCCATGAGCACCATCCGGTGGATGAGCTTTATATAGATGAATTCAAGACTTTTAATGCAACGCATCATCTTGTATGTTGCCTGAAGCTCGATGGAAGAGAATTGGAAGTATATGGCAGACAGCCTGCTTTTCGCTTTAGTGAAGAATTTTGCAAAGTTGAATCAGATCACTTAGGGCCGGGTCTGAAGGTGAAGGAGTGTGGAGTTCGTCTGATATATGAGCAAGATGTGCAAGAGTTGAACCAAACAACCACTCAATCAAGCAGTAGGATGTCTTCTTATGAGGATATATTGATTGGTTTTGACATTCCAATTGCAGGGGAAACCAGCGACGCTGGTAGCAGAACTTGCAGGCTTGAAGAATTGTAG

Protein Analysis

1180

Amino Acids

133.93

Weight (kDa)

6.59

Isoelectric Point (pI)

46.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 11 - 192 2.7e-49 TIR domain
TIR_2 PF13676 14 - 124 1.2e-13 TIR domain
NB-ARC PF00931 218 - 372 5.3e-20 NB-ARC domain
NACHT PF05729 222 - 344 6.7e-07 NACHT domain
WHD_ROQ1 PF23282 440 - 510 1.2e-21 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 699 - 784 7.6e-10 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 710 - 780 4.4e-09 Leucine-rich repeat region
C-JID PF20160 1017 - 1136 3.8e-17 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3127
AccB1I GGYRCC 1 cut(s) 345
AccB7I CCANNNNNTGG 3 cut(s) 647, 1624, 3193
AccI GTMKAC 4 cut(s) 563, 1637, 2432, 2842
AciI CCGC 7 cut(s) 70, 343, 354, 607, 682, 889, 2605
AclI AACGTT 1 cut(s) 2170
AclWI GGATC 5 cut(s) 323, 336, 664, 677, 939
AcoI YGGCCR 1 cut(s) 471
AcsI RAATTY 7 cut(s) 117, 726, 1804, 2687, 2899, 3215, 3320
AcuI CTGAAG 4 cut(s) 1610, 3014, 3278, 3380
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 3 cut(s) 2293, 2869, 3174
AfiI CCNNNNNNNGG 6 cut(s) 647, 1421, 1624, 2618, 3193, 3491
AgeI ACCGGT 1 cut(s) 83
AjnI CCWGG 3 cut(s) 982, 1540, 3052
AjuI GAANNNNNNNTTGG 4 cut(s) 738, 770, 2774, 2806
Alw21I GWGCWC 2 cut(s) 369, 3186
AlwI GGATC 5 cut(s) 323, 336, 664, 677, 939
AlwNI CAGNNNCTG 1 cut(s) 872
Ama87I CYCGRG 4 cut(s) 381, 708, 2066, 2147
AoxI GGCC 5 cut(s) 292, 471, 790, 1732, 3350
ApeKI GCWGC 3 cut(s) 455, 750, 872
ApoI RAATTY 7 cut(s) 117, 726, 1804, 2687, 2899, 3215, 3320
AseI ATTAAT 1 cut(s) 2111
AsiGI ACCGGT 1 cut(s) 83
Asp700I GAANNNNTTC 8 cut(s) 601, 813, 1083, 1515, 1609, 1950, 2999, 3036
AspS9I GGNCC 6 cut(s) 292, 655, 980, 1720, 2462, 3350
AsuC2I CCSGG 1 cut(s) 3354
AsuHPI GGTGA 5 cut(s) 115, 2386, 2678, 2722, 3376
AvaI CYCGRG 4 cut(s) 381, 708, 2066, 2147
AvaII GGWCC 4 cut(s) 655, 980, 1720, 2462
BalI TGGCCA 1 cut(s) 473
BamHI GGATCC 2 cut(s) 328, 669
BanI GGYRCC 1 cut(s) 345
BanII GRGCYC 1 cut(s) 369
BarI GAAGNNNNNNTAC 2 cut(s) 3433, 3465
BauI CACGAG 1 cut(s) 1190
BbsI GAAGAC 7 cut(s) 304, 1578, 1691, 2276, 2738, 3002, 3441
Bbv12I GWGCWC 2 cut(s) 369, 3186
BbvI GCAGC 3 cut(s) 442, 737, 859
BceAI ACGGC 3 cut(s) 337, 1078, 2246
BcgI CGANNNNNNTGC 2 cut(s) 2047, 2081
BciT130I CCWGG 3 cut(s) 984, 1542, 3054
BciVI GTATCC 1 cut(s) 1791
BcnI CCSGG 1 cut(s) 3354
BfaI CTAG 4 cut(s) 198, 794, 1394, 2846
BfmI CTRYAG 1 cut(s) 2266
BfuAI ACCTGC 1 cut(s) 3127
BfuI GTATCC 1 cut(s) 1791
BglII AGATCT 5 cut(s) 200, 1445, 1790, 1972, 2320
BisI GCNGC 4 cut(s) 344, 456, 751, 873
BlsI GCNGC 4 cut(s) 345, 457, 752, 874
Bme1390I CCNGG 4 cut(s) 984, 1542, 3054, 3354
Bme18I GGWCC 4 cut(s) 655, 980, 1720, 2462
BmeT110I CYCGRG 4 cut(s) 381, 708, 2066, 2147
BmgT120I GGNCC 6 cut(s) 292, 655, 980, 1720, 2462, 3350
BmiI GGNNCC 5 cut(s) 330, 347, 656, 671, 2547
BmrFI CCNGG 4 cut(s) 984, 1542, 3054, 3354
BmrI ACTGGG 1 cut(s) 1785
BmuI ACTGGG 1 cut(s) 1785
BpiI GAAGAC 7 cut(s) 304, 1578, 1691, 2276, 2738, 3002, 3441
Bpu10I CCTNAGC 1 cut(s) 1170
BpuEI CTTGAG 6 cut(s) 167, 1777, 1807, 1982, 2668, 2798
BpuMI CCSGG 1 cut(s) 3354
BsaBI GATNNNNATC 2 cut(s) 930, 2325
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1569, 1925
BsaJI CCNNGG 4 cut(s) 673, 983, 1618, 2014
BsaWI WCCGGW 2 cut(s) 83, 3190
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 6 cut(s) 647, 1421, 1624, 2618, 3193, 3491
Bse118I RCCGGY 1 cut(s) 83
Bse1I ACTGG 4 cut(s) 977, 1317, 1780, 2216
Bse8I GATNNNNATC 2 cut(s) 930, 2325
BseBI CCWGG 3 cut(s) 984, 1542, 3054
BseDI CCNNGG 4 cut(s) 673, 983, 1618, 2014
BseJI GATNNNNATC 2 cut(s) 930, 2325
BseLI CCNNNNNNNGG 6 cut(s) 647, 1421, 1624, 2618, 3193, 3491
BseMII CTCAG 3 cut(s) 1184, 2225, 2249
BseNI ACTGG 4 cut(s) 977, 1317, 1780, 2216
BseRI GAGGAG 2 cut(s) 206, 1754
BseXI GCAGC 3 cut(s) 442, 737, 859
BseYI CCCAGC 1 cut(s) 1506
BsgI GTGCAG 1 cut(s) 3105
BshFI GGCC 5 cut(s) 294, 473, 792, 1734, 3352
BshNI GGYRCC 1 cut(s) 345
BshTI ACCGGT 1 cut(s) 83
BsiHKAI GWGCWC 2 cut(s) 369, 3186
BsiHKCI CYCGRG 4 cut(s) 381, 708, 2066, 2147
BsiSI CCGG 4 cut(s) 84, 2754, 3191, 3353
BslFI GGGAC 1 cut(s) 1104
BslI CCNNNNNNNGG 6 cut(s) 647, 1421, 1624, 2618, 3193, 3491
BsmFI GGGAC 1 cut(s) 1104
BsmI GAATGC 1 cut(s) 609
BsnI GGCC 5 cut(s) 294, 473, 792, 1734, 3352
Bso31I GGTCTC 2 cut(s) 1569, 1925
BsoBI CYCGRG 4 cut(s) 381, 708, 2066, 2147
Bsp1286I GDGCHC 2 cut(s) 369, 3186
Bsp19I CCATGG 1 cut(s) 673
BspACI CCGC 7 cut(s) 70, 343, 354, 607, 682, 889, 2605
BspANI GGCC 5 cut(s) 294, 473, 792, 1734, 3352
BspCNI CTCAG 3 cut(s) 1183, 2226, 2250
BspHI TCATGA 3 cut(s) 613, 1567, 3067
BspLI GGNNCC 5 cut(s) 330, 347, 656, 671, 2547
BspMAI CTGCAG 1 cut(s) 2270
BspMI ACCTGC 1 cut(s) 3127
BspPI GGATC 5 cut(s) 323, 336, 664, 677, 939
BspT107I GGYRCC 1 cut(s) 345
BspTNI GGTCTC 2 cut(s) 1569, 1925
BsrFI RCCGGY 1 cut(s) 83
BsrI ACTGG 4 cut(s) 977, 1317, 1780, 2216
BssAI RCCGGY 1 cut(s) 83
BssECI CCNNGG 4 cut(s) 673, 983, 1618, 2014
BssNAI GTATAC 1 cut(s) 564
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1190
BssT1I CCWWGG 3 cut(s) 673, 1618, 2014
Bst1107I GTATAC 1 cut(s) 564
Bst2BI CACGAG 1 cut(s) 1190
Bst2UI CCWGG 3 cut(s) 984, 1542, 3054
Bst4CI ACNGT 4 cut(s) 1073, 1476, 2384, 2555
Bst6I CTCTTC 4 cut(s) 19, 1518, 1586, 3265
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 3 cut(s) 1489, 3403, 3522
BstC8I GCNNGC 6 cut(s) 488, 680, 1351, 2609, 3300, 3527
BstDEI CTNAG 8 cut(s) 47, 1170, 1694, 2234, 2258, 2723, 2772, 3346
BstDSI CCRYGG 1 cut(s) 673
BstMWI GCNNNNNNNGC 6 cut(s) 452, 684, 1489, 2773, 3403, 3522
BstNI CCWGG 3 cut(s) 984, 1542, 3054
BstNSI RCATGY 1 cut(s) 682
BstSCI CCNGG 4 cut(s) 982, 1540, 3052, 3352
BstSFI CTRYAG 1 cut(s) 2266
BstV1I GCAGC 3 cut(s) 442, 737, 859
BstV2I GAAGAC 7 cut(s) 304, 1578, 1691, 2276, 2738, 3002, 3441
BstX2I RGATCY 7 cut(s) 200, 328, 669, 1445, 1790, 1972, 2320
BstYI RGATCY 7 cut(s) 200, 328, 669, 1445, 1790, 1972, 2320
BstZ17I GTATAC 1 cut(s) 564
BsuI GTATCC 1 cut(s) 1791
BsuRI GGCC 5 cut(s) 294, 473, 792, 1734, 3352
BtgI CCRYGG 1 cut(s) 673
BtsIMutI CAGTG 2 cut(s) 1224, 2223
BveI ACCTGC 1 cut(s) 3127
Cac8I GCNNGC 6 cut(s) 488, 680, 1351, 2609, 3300, 3527
CaiI CAGNNNCTG 1 cut(s) 872
CciI TCATGA 3 cut(s) 613, 1567, 3067
Cfr10I RCCGGY 1 cut(s) 83
Cfr13I GGNCC 6 cut(s) 292, 655, 980, 1720, 2462, 3350
CseI GACGC 1 cut(s) 3515
Csp6I GTAC 3 cut(s) 2292, 2868, 3173
CspAI ACCGGT 1 cut(s) 83
CviQI GTAC 3 cut(s) 2292, 2868, 3173
DdeI CTNAG 8 cut(s) 47, 1170, 1694, 2234, 2258, 2723, 2772, 3346
DraI TTTAAA 2 cut(s) 2502, 2952
EaeI YGGCCR 1 cut(s) 471
Eam1104I CTCTTC 4 cut(s) 19, 1518, 1586, 3265
EarI CTCTTC 4 cut(s) 19, 1518, 1586, 3265
Ecl136II GAGCTC 1 cut(s) 367
Eco130I CCWWGG 3 cut(s) 673, 1618, 2014
Eco147I AGGCCT 1 cut(s) 1734
Eco24I GRGCYC 1 cut(s) 369
Eco31I GGTCTC 2 cut(s) 1569, 1925
Eco47I GGWCC 4 cut(s) 655, 980, 1720, 2462
Eco53kI GAGCTC 1 cut(s) 367
Eco57I CTGAAG 4 cut(s) 1610, 3014, 3278, 3380
Eco88I CYCGRG 4 cut(s) 381, 708, 2066, 2147
EcoICRI GAGCTC 1 cut(s) 367
EcoRI GAATTC 2 cut(s) 117, 3215
EcoRII CCWGG 3 cut(s) 982, 1540, 3052
EcoT14I CCWWGG 3 cut(s) 673, 1618, 2014
EcoT22I ATGCAT 3 cut(s) 281, 1485, 2896
EcoT38I GRGCYC 1 cut(s) 369
ErhI CCWWGG 3 cut(s) 673, 1618, 2014
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FaqI GGGAC 1 cut(s) 1104
FauI CCCGC 3 cut(s) 77, 614, 675
FauNDI CATATG 1 cut(s) 508
FblI GTMKAC 4 cut(s) 563, 1637, 2432, 2842
Fnu4HI GCNGC 4 cut(s) 344, 456, 751, 873
FriOI GRGCYC 1 cut(s) 369
Fsp4HI GCNGC 4 cut(s) 344, 456, 751, 873
FspBI CTAG 4 cut(s) 198, 794, 1394, 2846
GluI GCNGC 4 cut(s) 344, 456, 751, 873
GsaI CCCAGC 1 cut(s) 1510
HaeIII GGCC 5 cut(s) 294, 473, 792, 1734, 3352
HapII CCGG 4 cut(s) 84, 2754, 3191, 3353
HgaI GACGC 1 cut(s) 3515
Hin1I GRCGYC 1 cut(s) 5
HincII GTYRAC 4 cut(s) 9, 580, 939, 1638
HindII GTYRAC 4 cut(s) 9, 580, 939, 1638
HindIII AAGCTT 2 cut(s) 2030, 2774
HpaII CCGG 4 cut(s) 84, 2754, 3191, 3353
HphI GGTGA 5 cut(s) 115, 2386, 2678, 2722, 3376
Hpy166II GTNNAC 9 cut(s) 9, 564, 580, 641, 939, 1638, 1720, 2433, 2843
Hpy8I GTNNAC 9 cut(s) 9, 564, 580, 641, 939, 1638, 1720, 2433, 2843
Hpy99I CGWCG 2 cut(s) 24, 3509
HpyCH4III ACNGT 4 cut(s) 1073, 1476, 2384, 2555
HpyCH4IV ACGT 2 cut(s) 1549, 2170
HpyF10VI GCNNNNNNNGC 6 cut(s) 452, 684, 1489, 2773, 3403, 3522
HpyF3I CTNAG 8 cut(s) 47, 1170, 1694, 2234, 2258, 2723, 2772, 3346
HpySE526I ACGT 2 cut(s) 1549, 2170
Hsp92I GRCGYC 1 cut(s) 5
LmnI GCTCC 4 cut(s) 869, 987, 2545, 2672
Lsp1109I GCAGC 3 cut(s) 442, 737, 859
MaeI CTAG 4 cut(s) 198, 794, 1394, 2846
MaeII ACGT 2 cut(s) 1549, 2170
MaeIII GTNAC 2 cut(s) 1381, 2693
MfeI CAATTG 4 cut(s) 186, 2223, 2938, 3486
MflI RGATCY 7 cut(s) 200, 328, 669, 1445, 1790, 1972, 2320
MhlI GDGCHC 2 cut(s) 369, 3186
MlsI TGGCCA 1 cut(s) 473
MluNI TGGCCA 1 cut(s) 473
MlyI GAGTC 7 cut(s) 203, 1384, 1535, 1643, 1755, 2080, 3145
MmeI TCCRAC 1 cut(s) 2137
Mox20I TGGCCA 1 cut(s) 473
Mph1103I ATGCAT 3 cut(s) 281, 1485, 2896
MroXI GAANNNNTTC 8 cut(s) 601, 813, 1083, 1515, 1609, 1950, 2999, 3036
MscI TGGCCA 1 cut(s) 473
MslI CAYNNNNRTG 4 cut(s) 128, 596, 1628, 3087
Msp20I TGGCCA 1 cut(s) 473
MspI CCGG 4 cut(s) 84, 2754, 3191, 3353
MspR9I CCNGG 4 cut(s) 984, 1542, 3054, 3354
MunI CAATTG 4 cut(s) 186, 2223, 2938, 3486
Mva1269I GAATGC 1 cut(s) 609
MvaI CCWGG 3 cut(s) 984, 1542, 3054
MwoI GCNNNNNNNGC 6 cut(s) 452, 684, 1489, 2773, 3403, 3522
NciI CCSGG 1 cut(s) 3354
NcoI CCATGG 1 cut(s) 673
NdeI CATATG 1 cut(s) 508
NlaIV GGNNCC 5 cut(s) 330, 347, 656, 671, 2547
NmeAIII GCCGAG 1 cut(s) 2328
NmuCI GTSAC 2 cut(s) 1381, 2693
NsiI ATGCAT 3 cut(s) 281, 1485, 2896
NspI RCATGY 1 cut(s) 682
PaeI GCATGC 1 cut(s) 682
PaeR7I CTCGAG 1 cut(s) 2066
PagI TCATGA 3 cut(s) 613, 1567, 3067
PceI AGGCCT 1 cut(s) 1734
PctI GAATGC 1 cut(s) 609
PdmI GAANNNNTTC 8 cut(s) 601, 813, 1083, 1515, 1609, 1950, 2999, 3036
PflMI CCANNNNNTGG 3 cut(s) 647, 1624, 3193
PfoI TCCNGGA 1 cut(s) 3052
PinAI ACCGGT 1 cut(s) 83
PkrI GCNGC 4 cut(s) 345, 457, 752, 874
PleI GAGTC 7 cut(s) 202, 1383, 1534, 1642, 1755, 2079, 3144
PpsI GAGTC 7 cut(s) 202, 1383, 1534, 1642, 1755, 2079, 3144
PshBI ATTAAT 1 cut(s) 2111
Psp124BI GAGCTC 1 cut(s) 369
Psp1406I AACGTT 1 cut(s) 2170
Psp6I CCWGG 3 cut(s) 982, 1540, 3052
PspFI CCCAGC 1 cut(s) 1506
PspGI CCWGG 3 cut(s) 982, 1540, 3052
PspN4I GGNNCC 5 cut(s) 330, 347, 656, 671, 2547
PspPI GGNCC 6 cut(s) 292, 655, 980, 1720, 2462, 3350
PstI CTGCAG 1 cut(s) 2270
PstNI CAGNNNCTG 1 cut(s) 872
PsuI RGATCY 7 cut(s) 200, 328, 669, 1445, 1790, 1972, 2320
RsaI GTAC 3 cut(s) 2293, 2869, 3174
RsaNI GTAC 3 cut(s) 2292, 2868, 3173
RseI CAYNNNNRTG 4 cut(s) 128, 596, 1628, 3087
SacI GAGCTC 1 cut(s) 369
SalI GTCGAC 1 cut(s) 1636
SatI GCNGC 4 cut(s) 344, 456, 751, 873
Sau96I GGNCC 6 cut(s) 292, 655, 980, 1720, 2462, 3350
SchI GAGTC 7 cut(s) 203, 1384, 1535, 1643, 1755, 2080, 3145
ScrFI CCNGG 4 cut(s) 984, 1542, 3054, 3354
SduI GDGCHC 2 cut(s) 369, 3186
SfcI CTRYAG 1 cut(s) 2266
Sfr274I CTCGAG 1 cut(s) 2066
SinI GGWCC 4 cut(s) 655, 980, 1720, 2462
SlaI CTCGAG 1 cut(s) 2066
SmiI ATTTAAAT 1 cut(s) 2952
SmiMI CAYNNNNRTG 4 cut(s) 128, 596, 1628, 3087
SmlI CTYRAG 7 cut(s) 146, 1756, 1786, 1961, 2066, 2647, 2777
SmoI CTYRAG 7 cut(s) 146, 1756, 1786, 1961, 2066, 2647, 2777
SphI GCATGC 1 cut(s) 682
SseBI AGGCCT 1 cut(s) 1734
SsiI CCGC 7 cut(s) 70, 343, 354, 607, 682, 889, 2605
SspI AATATT 2 cut(s) 1335, 3064
SspMI CTAG 4 cut(s) 198, 794, 1394, 2846
SstI GAGCTC 1 cut(s) 369
StuI AGGCCT 1 cut(s) 1734
StyD4I CCNGG 4 cut(s) 982, 1540, 3052, 3352
StyI CCWWGG 3 cut(s) 673, 1618, 2014
SwaI ATTTAAAT 1 cut(s) 2952
TaaI ACNGT 4 cut(s) 1073, 1476, 2384, 2555
TaiI ACGT 2 cut(s) 1552, 2173
TaqI TCGA 8 cut(s) 769, 1478, 1637, 1767, 1944, 2067, 2342, 3264
TatI WGTACW 2 cut(s) 2867, 3172
TauI GCSGC 1 cut(s) 346
TscAI CASTG 2 cut(s) 1231, 2223
TseFI GTSAC 2 cut(s) 1381, 2693
TseI GCWGC 3 cut(s) 455, 750, 872
Tsp45I GTSAC 2 cut(s) 1381, 2693
TspGWI ACGGA 4 cut(s) 547, 647, 1170, 2558
TspRI CASTG 2 cut(s) 1231, 2223
Van91I CCANNNNNTGG 3 cut(s) 647, 1624, 3193
VpaK11BI GGWCC 4 cut(s) 655, 980, 1720, 2462
VspI ATTAAT 1 cut(s) 2111
XapI RAATTY 7 cut(s) 117, 726, 1804, 2687, 2899, 3215, 3320
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 1 cut(s) 682
XcmI CCANNNNNNNNNTGG 3 cut(s) 829, 2012, 3089
XhoI CTCGAG 1 cut(s) 2066
XmiI GTMKAC 4 cut(s) 563, 1637, 2432, 2842
XmnI GAANNNNTTC 8 cut(s) 601, 813, 1083, 1515, 1609, 1950, 2999, 3036
XspI CTAG 4 cut(s) 198, 794, 1394, 2846
Zsp2I ATGCAT 3 cut(s) 281, 1485, 2896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.