Rorug05G0477500

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
65712857 .. 65717581
4725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0477500.1

Sequence Viewer

Length: 1158 bp
ATGGCGACGACGAGCGCTGTCTACATCAGTGTCATCGAGGACGTCATCAACAAGGTCAAAGAAGAGTTCGTCAATGGCGCCGGAGAAGAAGTTCTCAAGGAGCTTCAAGGAACTTGGGAGGCGAAGATGATGCAAGCTGGTGTTGTAAATGCTCCGATTGAGAGGTCTGCGGCTGCAAAGCCCACACCTGGAGTTACTCCAGTTCATGATCTCAACGTACCGTATGAGGGGACTGAGGAGTATGAAACTCCTACTGCTGATTTACTCTTCCCTCCAACCCCGTTACAAACTCCAATGCCGCAAACTCCTATTCCAACTCCCATCCCACAAACTCCAAGTCAAACACCAGGAACTGCGGAGAATTATAATATTCCTACTGGAGCTAGTGACGATTCTGGTGGCGGCAACGCAGGTGGAAATACAGAGTTGAAACCGGGAAGACCTAGCCCATACATGCAACCTCCTTCTCCTTGGATGACTCAGCGGCCCCCACTTGATGTTAATATTGCTTACGTGGAAGGGCGGGATGAGGTGGACAGAGGAACCTCTCATCAACCCCCGACACAGGACTTTTTCACAATGTCTGCTGGAAAGCGAAAACGTGAAGAAATCCCCCCACAATATCAAGCTGGTGGGTTTATACCCCAGCAAGATGGAGCCGGAGATGCTATACCTGAACTTTTTGAGATTGAGATTTGTGGAGGGAGCACTTCTATTGGTGGTGGTGGACGTGGGTATGGTAAGATGTCTGCTTGTGCAACCAAGATTCCTCAACTCGATGGGCCCATCCCTGATCCCTATGAAGAGCTTTCTACTCCCAATATATACAATTATCAAGGAGTTTTCAATGAAGACTACAACATTGCCAACACACCAGCTCCCAATGATGTACCAGTCAGCACTCCAGCTCCTGTTGTTCAGAATGATGTTGGAGATGATGATGAGGACGATGAGCCCCCATTGAATGAAAATGACGATGATGATCTGGATGATGTGGACCAAGGAGAGGAACTGAACACACAGCATTTGGTATTGGCTCAGTTTGACAAGGTGACACGCACCAAGAGCAGGTGGAAGTGCACACTGAAGGATGGCATTATGCACATAAACAACAAGGATGTCCTTTTTAATAAGGCGACGGGAGAATTCGACTTCTGA

Protein Analysis

385

Amino Acids

41.69

Weight (kDa)

4.22

Isoelectric Point (pI)

57.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TFIIA PF03153 7 - 139 1.1e-15 Transcription factor IIA, alpha/beta subunit
TFIIA PF03153 252 - 384 1e-30 Transcription factor IIA, alpha/beta subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 366
AarI CACCTGC 2 cut(s) 401, 1059
AatII GACGTC 1 cut(s) 45
Acc36I ACCTGC 2 cut(s) 401, 1059
AccB1I GGYRCC 1 cut(s) 77
AccI GTMKAC 1 cut(s) 21
AciI CCGC 6 cut(s) 170, 299, 356, 402, 484, 523
AclWI GGATC 1 cut(s) 788
AcsI RAATTY 1 cut(s) 1145
AcuI CTGAAG 1 cut(s) 1106
AcyI GRCGYC 2 cut(s) 42, 78
AfaI GTAC 2 cut(s) 219, 891
AfeI AGCGCT 1 cut(s) 16
AfiI CCNNNNNNNGG 5 cut(s) 188, 227, 565, 1006, 1068
AgsI TTSAA 4 cut(s) 107, 430, 847, 964
AjiI CACGTC 1 cut(s) 731
AjnI CCWGG 2 cut(s) 187, 346
AloI GAACNNNNNNTCC 2 cut(s) 75, 107
AluBI AGCT 7 cut(s) 103, 137, 383, 629, 808, 878, 908
AluI AGCT 7 cut(s) 103, 137, 383, 629, 808, 878, 908
Alw21I GWGCWC 2 cut(s) 710, 1082
Alw44I GTGCAC 1 cut(s) 1078
AlwI GGATC 1 cut(s) 788
AlwNI CAGNNNCTG 2 cut(s) 353, 911
Aor51HI AGCGCT 1 cut(s) 16
AoxI GGCC 2 cut(s) 485, 782
ApaI GGGCCC 1 cut(s) 786
ApaLI GTGCAC 1 cut(s) 1078
ApeKI GCWGC 1 cut(s) 173
ApoI RAATTY 1 cut(s) 1145
ArsI GACNNNNNNTTYG 2 cut(s) 322, 354
Asp700I GAANNNNTTC 1 cut(s) 90
AspLEI GCGC 2 cut(s) 17, 80
AspS9I GGNCC 4 cut(s) 486, 782, 783, 997
AsuC2I CCSGG 1 cut(s) 435
AsuHPI GGTGA 1 cut(s) 1063
AvaII GGWCC 1 cut(s) 997
BaeGI GKGCMC 2 cut(s) 786, 1082
BanI GGYRCC 1 cut(s) 77
BanII GRGCYC 2 cut(s) 786, 957
BbsI GAAGAC 2 cut(s) 445, 858
Bbv12I GWGCWC 2 cut(s) 710, 1082
BbvI GCAGC 1 cut(s) 160
BccI CCATC 5 cut(s) 329, 647, 773, 794, 1085
BcgI CGANNNNNNTGC 2 cut(s) 112, 146
BciT130I CCWGG 2 cut(s) 189, 348
BcnI CCSGG 1 cut(s) 435
BfaI CTAG 2 cut(s) 384, 444
BfoI RGCGCY 2 cut(s) 18, 81
BfuAI ACCTGC 2 cut(s) 401, 1059
BisI GCNGC 5 cut(s) 171, 174, 299, 403, 485
BlsI GCNGC 5 cut(s) 172, 175, 300, 404, 486
Bme1390I CCNGG 3 cut(s) 189, 348, 435
Bme18I GGWCC 1 cut(s) 997
BmgBI CACGTC 1 cut(s) 731
BmgT120I GGNCC 4 cut(s) 486, 782, 783, 997
BmiI GGNNCC 5 cut(s) 79, 488, 544, 658, 784
BmrFI CCNGG 3 cut(s) 189, 348, 435
BmsI GCATC 2 cut(s) 120, 655
BpiI GAAGAC 2 cut(s) 445, 858
BpmI CTGGAG 4 cut(s) 183, 210, 399, 888
BpuEI CTTGAG 1 cut(s) 80
BpuMI CCSGG 1 cut(s) 435
BsaAI YACGTR 1 cut(s) 514
BsaBI GATNNNNATC 1 cut(s) 981
BsaHI GRCGYC 2 cut(s) 42, 78
BsaJI CCNNGG 2 cut(s) 470, 1000
BsaXI ACNNNNNCTCC 6 cut(s) 75, 105, 862, 892, 892, 922
Bsc4I CCNNNNNNNGG 5 cut(s) 188, 227, 565, 1006, 1068
Bse1I ACTGG 3 cut(s) 200, 382, 893
Bse3DI GCAATG 1 cut(s) 861
Bse8I GATNNNNATC 1 cut(s) 981
BseBI CCWGG 2 cut(s) 189, 348
BseDI CCNNGG 2 cut(s) 470, 1000
BseGI GGATG 7 cut(s) 321, 480, 532, 786, 994, 1096, 1123
BseJI GATNNNNATC 1 cut(s) 981
BseLI CCNNNNNNNGG 5 cut(s) 188, 227, 565, 1006, 1068
BseMI GCAATG 1 cut(s) 861
BseMII CTCAG 3 cut(s) 225, 494, 1052
BseNI ACTGG 3 cut(s) 200, 382, 893
BseRI GAGGAG 1 cut(s) 251
BseSI GKGCMC 2 cut(s) 786, 1082
BseXI GCAGC 1 cut(s) 160
BseYI CCCAGC 1 cut(s) 645
BshFI GGCC 2 cut(s) 487, 784
BshNI GGYRCC 1 cut(s) 77
BsiHKAI GWGCWC 2 cut(s) 710, 1082
BsiSI CCGG 3 cut(s) 81, 434, 660
BslFI GGGAC 1 cut(s) 244
BslI CCNNNNNNNGG 5 cut(s) 188, 227, 565, 1006, 1068
BsmFI GGGAC 1 cut(s) 244
BsnI GGCC 2 cut(s) 487, 784
Bsp120I GGGCCC 1 cut(s) 782
Bsp1286I GDGCHC 4 cut(s) 710, 786, 957, 1082
Bsp143I GATC 3 cut(s) 208, 793, 982
BspACI CCGC 6 cut(s) 170, 299, 356, 402, 484, 523
BspANI GGCC 2 cut(s) 487, 784
BspCNI CTCAG 3 cut(s) 226, 493, 1051
BspHI TCATGA 1 cut(s) 205
BspLI GGNNCC 5 cut(s) 79, 488, 544, 658, 784
BspMI ACCTGC 2 cut(s) 401, 1059
BspPI GGATC 1 cut(s) 788
BspQI GCTCTTC 1 cut(s) 798
BspT107I GGYRCC 1 cut(s) 77
BsrDI GCAATG 1 cut(s) 861
BsrI ACTGG 3 cut(s) 200, 382, 893
BssECI CCNNGG 2 cut(s) 470, 1000
BssMI GATC 3 cut(s) 208, 793, 982
BssNI GRCGYC 2 cut(s) 42, 78
BssT1I CCWWGG 2 cut(s) 470, 1000
Bst2UI CCWGG 2 cut(s) 189, 348
Bst4CI ACNGT 1 cut(s) 222
Bst6I CTCTTC 3 cut(s) 57, 272, 798
BstACI GRCGYC 2 cut(s) 42, 78
BstBAI YACGTR 1 cut(s) 514
BstC8I GCNNGC 1 cut(s) 135
BstDEI CTNAG 3 cut(s) 234, 480, 1038
BstF5I GGATG 7 cut(s) 321, 480, 532, 786, 994, 1096, 1123
BstH2I RGCGCY 2 cut(s) 18, 81
BstHHI GCGC 2 cut(s) 17, 80
BstKTI GATC 3 cut(s) 211, 796, 985
BstMBI GATC 3 cut(s) 208, 793, 982
BstMWI GCNNNNNNNGC 2 cut(s) 665, 1065
BstNI CCWGG 2 cut(s) 189, 348
BstNSI RCATGY 1 cut(s) 457
BstSCI CCNGG 3 cut(s) 187, 346, 433
BstSLI GKGCMC 2 cut(s) 786, 1082
BstV1I GCAGC 1 cut(s) 160
BstV2I GAAGAC 2 cut(s) 445, 858
BstXI CCANNNNNNTGG 1 cut(s) 653
BsuRI GGCC 2 cut(s) 487, 784
BtrI CACGTC 1 cut(s) 731
BtsCI GGATG 7 cut(s) 321, 480, 532, 786, 994, 1096, 1123
BtsIMutI CAGTG 2 cut(s) 34, 1082
BveI ACCTGC 2 cut(s) 401, 1059
Cac8I GCNNGC 1 cut(s) 135
CaiI CAGNNNCTG 2 cut(s) 353, 911
CciI TCATGA 1 cut(s) 205
CfoI GCGC 2 cut(s) 17, 80
Cfr13I GGNCC 4 cut(s) 486, 782, 783, 997
Csp6I GTAC 2 cut(s) 218, 890
CspCI CAANNNNNGTGG 2 cut(s) 394, 429
CviAII CATG 2 cut(s) 206, 454
CviQI GTAC 2 cut(s) 218, 890
DdeI CTNAG 3 cut(s) 234, 480, 1038
DinI GGCGCC 1 cut(s) 79
DpnI GATC 3 cut(s) 210, 795, 984
DpnII GATC 3 cut(s) 208, 793, 982
Eam1104I CTCTTC 3 cut(s) 57, 272, 798
EarI CTCTTC 3 cut(s) 57, 272, 798
Eco130I CCWWGG 2 cut(s) 470, 1000
Eco24I GRGCYC 2 cut(s) 786, 957
Eco47I GGWCC 1 cut(s) 997
Eco47III AGCGCT 1 cut(s) 16
Eco57I CTGAAG 1 cut(s) 1106
EcoRI GAATTC 1 cut(s) 1145
EcoRII CCWGG 2 cut(s) 187, 346
EcoT14I CCWWGG 2 cut(s) 470, 1000
EcoT38I GRGCYC 2 cut(s) 786, 957
EgeI GGCGCC 1 cut(s) 79
EheI GGCGCC 1 cut(s) 79
ErhI CCWWGG 2 cut(s) 470, 1000
FaeI CATG 2 cut(s) 209, 457
FaqI GGGAC 1 cut(s) 244
FatI CATG 2 cut(s) 205, 453
FauI CCCGC 1 cut(s) 516
FblI GTMKAC 1 cut(s) 21
Fnu4HI GCNGC 5 cut(s) 171, 174, 299, 403, 485
FokI GGATG 7 cut(s) 308, 487, 539, 773, 1001, 1103, 1130
FriOI GRGCYC 2 cut(s) 786, 957
Fsp4HI GCNGC 5 cut(s) 171, 174, 299, 403, 485
FspBI CTAG 2 cut(s) 384, 444
GlaI GCGC 2 cut(s) 16, 79
GluI GCNGC 5 cut(s) 171, 174, 299, 403, 485
GsaI CCCAGC 1 cut(s) 649
GsuI CTGGAG 4 cut(s) 183, 210, 399, 888
HaeII RGCGCY 2 cut(s) 18, 81
HaeIII GGCC 2 cut(s) 487, 784
HapII CCGG 3 cut(s) 81, 434, 660
HhaI GCGC 2 cut(s) 17, 80
Hin1I GRCGYC 2 cut(s) 42, 78
Hin1II CATG 2 cut(s) 209, 457
Hin6I GCGC 2 cut(s) 15, 78
HinP1I GCGC 2 cut(s) 15, 78
HinfI GANTC 3 cut(s) 392, 478, 766
HpaII CCGG 3 cut(s) 81, 434, 660
HphI GGTGA 1 cut(s) 1063
Hpy166II GTNNAC 5 cut(s) 22, 535, 728, 997, 1080
Hpy188I TCNGA 3 cut(s) 156, 921, 1157
Hpy188III TCNNGA 2 cut(s) 206, 986
Hpy8I GTNNAC 5 cut(s) 22, 535, 728, 997, 1080
Hpy99I CGWCG 3 cut(s) 10, 13, 1141
HpyAV CCTTC 3 cut(s) 474, 512, 1081
HpyCH4III ACNGT 1 cut(s) 222
HpyCH4IV ACGT 5 cut(s) 42, 216, 513, 601, 730
HpyCH4V TGCA 6 cut(s) 133, 176, 457, 758, 1080, 1102
HpyF10VI GCNNNNNNNGC 2 cut(s) 665, 1065
HpyF3I CTNAG 3 cut(s) 234, 480, 1038
HpySE526I ACGT 5 cut(s) 42, 216, 513, 601, 730
Hsp92I GRCGYC 2 cut(s) 42, 78
Hsp92II CATG 2 cut(s) 209, 457
HspAI GCGC 2 cut(s) 15, 78
KasI GGCGCC 1 cut(s) 77
Kzo9I GATC 3 cut(s) 208, 793, 982
LguI GCTCTTC 1 cut(s) 798
LmnI GCTCC 7 cut(s) 100, 157, 380, 656, 705, 883, 913
Lsp1109I GCAGC 1 cut(s) 160
LweI GCATC 2 cut(s) 120, 655
MaeI CTAG 2 cut(s) 384, 444
MaeII ACGT 5 cut(s) 42, 216, 513, 601, 730
MaeIII GTNAC 4 cut(s) 193, 282, 386, 1051
MalI GATC 3 cut(s) 210, 795, 984
MboI GATC 3 cut(s) 208, 793, 982
MboII GAAGA 8 cut(s) 74, 98, 136, 259, 450, 617, 815, 863
MhlI GDGCHC 4 cut(s) 710, 786, 957, 1082
MluCI AATT 3 cut(s) 361, 829, 1145
Mly113I GGCGCC 1 cut(s) 78
MlyI GAGTC 1 cut(s) 472
MmeI TCCRAC 3 cut(s) 299, 338, 910
MroXI GAANNNNTTC 1 cut(s) 90
MseI TTAA 2 cut(s) 501, 1128
MspA1I CMGCKG 1 cut(s) 484
MspI CCGG 3 cut(s) 81, 434, 660
MspR9I CCNGG 3 cut(s) 189, 348, 435
MvaI CCWGG 2 cut(s) 189, 348
MwoI GCNNNNNNNGC 2 cut(s) 665, 1065
NarI GGCGCC 1 cut(s) 78
NciI CCSGG 1 cut(s) 435
NdeII GATC 3 cut(s) 208, 793, 982
NlaIII CATG 2 cut(s) 209, 457
NlaIV GGNNCC 5 cut(s) 79, 488, 544, 658, 784
NmuCI GTSAC 2 cut(s) 386, 1051
NspI RCATGY 1 cut(s) 457
PagI TCATGA 1 cut(s) 205
PaqCI CACCTGC 2 cut(s) 401, 1059
PciSI GCTCTTC 1 cut(s) 798
PdmI GAANNNNTTC 1 cut(s) 90
PfeI GAWTC 2 cut(s) 392, 766
PkrI GCNGC 5 cut(s) 172, 175, 300, 404, 486
PleI GAGTC 1 cut(s) 472
PluTI GGCGCC 1 cut(s) 81
PpsI GAGTC 1 cut(s) 472
Ppu21I YACGTR 1 cut(s) 514
PsiI TTATAA 1 cut(s) 366
Psp6I CCWGG 2 cut(s) 187, 346
PspFI CCCAGC 1 cut(s) 645
PspGI CCWGG 2 cut(s) 187, 346
PspN4I GGNNCC 5 cut(s) 79, 488, 544, 658, 784
PspOMI GGGCCC 1 cut(s) 782
PspPI GGNCC 4 cut(s) 486, 782, 783, 997
PstNI CAGNNNCTG 2 cut(s) 353, 911
RsaI GTAC 2 cut(s) 219, 891
RsaNI GTAC 2 cut(s) 218, 890
SapI GCTCTTC 1 cut(s) 798
SaqAI TTAA 2 cut(s) 501, 1128
SatI GCNGC 5 cut(s) 171, 174, 299, 403, 485
Sau3AI GATC 3 cut(s) 208, 793, 982
Sau96I GGNCC 4 cut(s) 486, 782, 783, 997
SchI GAGTC 1 cut(s) 472
ScrFI CCNGG 3 cut(s) 189, 348, 435
SduI GDGCHC 4 cut(s) 710, 786, 957, 1082
SfaNI GCATC 2 cut(s) 120, 655
SfoI GGCGCC 1 cut(s) 79
SinI GGWCC 1 cut(s) 997
SmlI CTYRAG 1 cut(s) 95
SmoI CTYRAG 1 cut(s) 95
Sse9I AATT 3 cut(s) 361, 829, 1145
SsiI CCGC 6 cut(s) 170, 299, 356, 402, 484, 523
SspDI GGCGCC 1 cut(s) 77
SspI AATATT 2 cut(s) 370, 505
SspMI CTAG 2 cut(s) 384, 444
StyD4I CCNGG 3 cut(s) 187, 346, 433
StyI CCWWGG 2 cut(s) 470, 1000
TaaI ACNGT 1 cut(s) 222
TaiI ACGT 5 cut(s) 45, 219, 516, 604, 733
TaqI TCGA 3 cut(s) 36, 777, 1149
TasI AATT 3 cut(s) 361, 829, 1145
TauI GCSGC 4 cut(s) 173, 301, 405, 487
TfiI GAWTC 2 cut(s) 392, 766
Tru1I TTAA 2 cut(s) 501, 1128
Tru9I TTAA 2 cut(s) 501, 1128
TscAI CASTG 2 cut(s) 34, 1089
TseFI GTSAC 2 cut(s) 386, 1051
TseI GCWGC 1 cut(s) 173
Tsp45I GTSAC 2 cut(s) 386, 1051
TspDTI ATGAA 5 cut(s) 194, 258, 816, 864, 981
TspRI CASTG 2 cut(s) 34, 1089
VneI GTGCAC 1 cut(s) 1078
VpaK11BI GGWCC 1 cut(s) 997
XapI RAATTY 1 cut(s) 1145
XceI RCATGY 1 cut(s) 457
XmiI GTMKAC 1 cut(s) 21
XmnI GAANNNNTTC 1 cut(s) 90
XspI CTAG 2 cut(s) 384, 444
ZraI GACGTC 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.