Rroxscaffold_1G00001940

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
2342316 .. 2344298
1983 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00001940.1

Sequence Viewer

Length: 1983 bp
ATGTCTCAGAAACAAAGAAATATGCTAGCAGTTCTGCCTTATTACCCAATAGCTCACTTCTTCCTTCTTACTCTACTTGGCTCCATTTTATCTACACATATTCATGCATGCACCTCAAGTGAAAGTACCTCTCTCATGTCATTCGCCCTCACTCTGTCTTCTCCTTCCTTAAATTGGACTACCATGGATTGTTGCCGATGGGAAGGCATTACTTGTGATGTGGCTGGTCGAGTAACCCATTTGCACTTATCCTCCAAAGGCCTCAAACTCAAAGGAGGCATTTTTTCCTCATCATCACTCCAAAATCTCACACATCTCACCCACCTCAATCTCTCTCGCAATTCACTTTATGGTTCTTTAGATCAAGCCGGATTCTTCTTGTCCTTGGGTCATCTTGAGGTACTTGATTTGAGTTTTAACCTTCTTTCTGGAGAGCTCCCAGGTTCTCTATCATCATCCAATAATATTCGAATGGTGGATTTGTCTAGCAATCGCTTCCATGGTGCAATTCCATCCTCCTTCTTCCAACAAGCAAAGAATTTGACTCATTTCAATGTCATGAACAACACTTTCTCAGGTTATATCCCGTCCCCTATTTGTGTCCAGTCTTTTTCATTGATTAGGCTATTGGATTTTTCCTACAATAAATTTGGAGGCAATCTCTCTCGCGGAATAGGAAATTGTTCCAAACTGGAAGTCTTCCGCGCTGGTTACAATAACCTCTCAGGATCACTTCCAGAAGATATATATGATGCTACCACACTGGAAGAAATTGCAATCCCTGCTAATTTGTTCTATGGAGGCATTAGTAACAGAATTGTTAACCTCACTAACCTCACAATCCTTGACCTCTACTTTAATAATTTCAGTGGCATGCTTCCAGTAGATGTTGGGAAGCTCTCCAAATTGAAAGTCTTGCTCCTTCATTCCAATAATCTAGAAGGTTCCTTGCCACCATCTTTGCTGAATTGCACAAACCTTATGGAACTGAATTTAGGATTCAACCTTTTGAAAGGAAATATCTCAGCTTTTAATTTCTCCAGACTAGGTCAACTTCGTAAACTTGACTTTATGAGTAATCATTTTACTGGTATCTTGCCAATAAGCCTTTACTCATGCAAGTTCCTTAGAGCAATTCGACTAAGCTTAAACAATCTAGAGGGACAAATACAAGCCGAGATTGTCTCATTAAAATACTTATCCTTCCTCTCACTTTCTGGGAACAGACTGACCAATATCACAAGCGCTATGAATATATTGAAGGGCTGTAGAAATCTCACGGTACTTATCCTTTCAACCACTTTTATAGGTGAAAAAATGCCAGATGGTGATCACATGGCTGACTTTGATGGATTCCAAAATCTTAGGATTTTGGCTTTGCGTGGTTGTGAGCTCACGGGTCAAATACCTATATGGTTTTCTAAGCTCAAGAAGCTAGAGATCTTGGATGTGTCTCTTAATAGAATCACAGGCCCAATTCCTACTTGGTTGGGGACTTTTCCAATGCTCTTTTCTATAAACTTGGGGTCCAACCTACTCTCAGATGAAATTCCAAAAGAACTTTGCACACTACCAATGCTGGTATCTGAACAAACTGCAGCTCAAGTAGATCACGGTTATCTTGAATTGCCTTTCTTCGCTTCCCAAGCCACGCCAGATGCAAGCATTTTACAGTTCAATTCTTTGTCTTACTATCCACCATCGATATTCCTAGGCAACAATAACATAAGTGGCAATATACCTACTGAGCTCGGAAAGTTGCAACTTCTCCGTACATTGGATCTCAGCGCCAACCAGGTGTCGGGCAAGATTCCGGACCAAATATCTAATCTCAAAAACTTGGAGACATTGGATCTTTCAGTGAATCATTTGTCTGGAGAAATCCCACCTTCAATGGCGAGTCTTAGTTTCTTGTCATCTTTTAATGTCTCATATAATAATTTGGAAGGAGAAATACCAAAAGCACTCAGCTCCAAGGCTTGA

Protein Analysis

660

Amino Acids

72.52

Weight (kDa)

6.94

Isoelectric Point (pI)

36.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 105 - 166 2.4e-06 Leucine rich repeat
LRR_14 PF23598 272 - 514 1.2e-06 Leucine-rich repeat region
LRR_8 PF13855 454 - 513 9.4e-08 Leucine rich repeat
LRR_14 PF23598 582 - 644 2.6e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 669, 705
AccIII TCCGGA 1 cut(s) 1813
AciI CCGC 2 cut(s) 669, 703
AclWI GGATC 3 cut(s) 736, 1788, 1860
AcsI RAATTY 4 cut(s) 538, 647, 991, 1548
AfaI GTAC 4 cut(s) 127, 402, 1284, 1774
AfeI AGCGCT 1 cut(s) 1246
AfiI CCNNNNNNNGG 3 cut(s) 174, 1777, 1801
AgsI TTSAA 9 cut(s) 553, 910, 1003, 1012, 1261, 1296, 1625, 1678, 1893
AjnI CCWGG 2 cut(s) 439, 1794
AjuI GAANNNNNNNTTGG 2 cut(s) 1495, 1527
Alw21I GWGCWC 3 cut(s) 438, 1395, 1752
Alw26I GTCTC 5 cut(s) 9, 1189, 1458, 1838, 1933
AlwI GGATC 3 cut(s) 736, 1788, 1860
Aor13HI TCCGGA 1 cut(s) 1813
Aor51HI AGCGCT 1 cut(s) 1246
AoxI GGCC 2 cut(s) 259, 1471
ApeKI GCWGC 1 cut(s) 1598
ApoI RAATTY 4 cut(s) 538, 647, 991, 1548
ArsI GACNNNNNNTTYG 4 cut(s) 681, 713, 897, 929
Asp700I GAANNNNTTC 1 cut(s) 682
AspA2I CCTAGG 1 cut(s) 1711
AspLEI GCGC 3 cut(s) 707, 1247, 1790
AspS9I GGNCC 3 cut(s) 1472, 1527, 1816
AsuHPI GGTGA 3 cut(s) 310, 1322, 1340
AsuII TTCGAA 1 cut(s) 469
AsuNHI GCTAGC 1 cut(s) 25
AvaII GGWCC 2 cut(s) 1527, 1816
AvrII CCTAGG 1 cut(s) 1711
BanII GRGCYC 3 cut(s) 438, 1395, 1752
BarI GAAGNNNNNNTAC 2 cut(s) 1938, 1970
BbsI GAAGAC 2 cut(s) 150, 691
Bbv12I GWGCWC 3 cut(s) 438, 1395, 1752
BbvI GCAGC 1 cut(s) 1610
BccI CCATC 6 cut(s) 192, 520, 964, 1319, 1343, 1708
BciT130I CCWGG 2 cut(s) 441, 1796
BclI TGATCA 1 cut(s) 1330
BcoDI GTCTC 5 cut(s) 9, 1189, 1458, 1838, 1933
BfaI CTAG 7 cut(s) 26, 486, 938, 1046, 1157, 1436, 1712
BfmI CTRYAG 2 cut(s) 1267, 1596
BfoI RGCGCY 2 cut(s) 1248, 1791
BglII AGATCT 1 cut(s) 1440
BisI GCNGC 1 cut(s) 1599
BlnI CCTAGG 1 cut(s) 1711
BlsI GCNGC 1 cut(s) 1600
Bme1390I CCNGG 2 cut(s) 441, 1796
Bme18I GGWCC 2 cut(s) 1527, 1816
BmgT120I GGNCC 3 cut(s) 1472, 1527, 1816
BmiI GGNNCC 3 cut(s) 82, 946, 1528
BmrFI CCNGG 2 cut(s) 441, 1796
BmsI GCATC 2 cut(s) 742, 1648
BmtI GCTAGC 1 cut(s) 29
BpiI GAAGAC 2 cut(s) 150, 691
BplI GAGNNNNNCTC 4 cut(s) 645, 677, 1169, 1201
BpmI CTGGAG 3 cut(s) 450, 1024, 1896
Bpu14I TTCGAA 1 cut(s) 469
BpuEI CTTGAG 4 cut(s) 100, 416, 1412, 1587
Bsa29I ATCGAT 1 cut(s) 1703
BsaBI GATNNNNATC 1 cut(s) 1329
BsaJI CCNNGG 6 cut(s) 183, 384, 439, 499, 1711, 1974
BsaWI WCCGGW 1 cut(s) 1813
BsaXI ACNNNNNCTCC 2 cut(s) 236, 266
Bsc4I CCNNNNNNNGG 3 cut(s) 174, 1777, 1801
Bse1I ACTGG 5 cut(s) 604, 696, 768, 881, 1093
Bse8I GATNNNNATC 1 cut(s) 1329
BseAI TCCGGA 1 cut(s) 1813
BseBI CCWGG 2 cut(s) 441, 1796
BseCI ATCGAT 1 cut(s) 1703
BseDI CCNNGG 6 cut(s) 183, 384, 439, 499, 1711, 1974
BseGI GGATG 3 cut(s) 455, 512, 1453
BseJI GATNNNNATC 1 cut(s) 1329
BseLI CCNNNNNNNGG 3 cut(s) 174, 1777, 1801
BseMII CTCAG 8 cut(s) 20, 588, 738, 1038, 1554, 1737, 1798, 1981
BseNI ACTGG 5 cut(s) 604, 696, 768, 881, 1093
BseXI GCAGC 1 cut(s) 1610
Bsh1236I CGCG 2 cut(s) 669, 705
BshFI GGCC 2 cut(s) 261, 1473
BshVI ATCGAT 1 cut(s) 1703
BsiHKAI GWGCWC 3 cut(s) 438, 1395, 1752
BsiSI CCGG 2 cut(s) 369, 1814
BslFI GGGAC 3 cut(s) 574, 1176, 1507
BslI CCNNNNNNNGG 3 cut(s) 174, 1777, 1801
BsmAI GTCTC 5 cut(s) 9, 1189, 1458, 1838, 1933
BsmFI GGGAC 3 cut(s) 574, 1176, 1507
BsnI GGCC 2 cut(s) 261, 1473
Bsp119I TTCGAA 1 cut(s) 469
Bsp1286I GDGCHC 3 cut(s) 438, 1395, 1752
Bsp13I TCCGGA 1 cut(s) 1813
Bsp143I GATC 7 cut(s) 361, 728, 1330, 1440, 1609, 1780, 1852
Bsp19I CCATGG 2 cut(s) 183, 499
BspACI CCGC 2 cut(s) 669, 703
BspANI GGCC 2 cut(s) 261, 1473
BspCNI CTCAG 8 cut(s) 19, 587, 737, 1037, 1553, 1738, 1797, 1980
BspDI ATCGAT 1 cut(s) 1703
BspEI TCCGGA 1 cut(s) 1813
BspFNI CGCG 2 cut(s) 669, 705
BspHI TCATGA 1 cut(s) 558
BspLI GGNNCC 3 cut(s) 82, 946, 1528
BspMAI CTGCAG 1 cut(s) 1600
BspOI GCTAGC 1 cut(s) 29
BspPI GGATC 3 cut(s) 736, 1788, 1860
BspT104I TTCGAA 1 cut(s) 469
BsrI ACTGG 5 cut(s) 604, 696, 768, 881, 1093
BssECI CCNNGG 6 cut(s) 183, 384, 439, 499, 1711, 1974
BssMI GATC 7 cut(s) 361, 728, 1330, 1440, 1609, 1780, 1852
BssT1I CCWWGG 5 cut(s) 183, 384, 499, 1711, 1974
Bst2UI CCWGG 2 cut(s) 441, 1796
Bst4CI ACNGT 3 cut(s) 1282, 1616, 1674
BstAPI GCANNNNNTGC 1 cut(s) 782
BstBI TTCGAA 1 cut(s) 469
BstC8I GCNNGC 4 cut(s) 27, 109, 875, 1663
BstDSI CCRYGG 2 cut(s) 183, 499
BstF5I GGATG 3 cut(s) 455, 512, 1453
BstFNI CGCG 2 cut(s) 669, 705
BstH2I RGCGCY 2 cut(s) 1248, 1791
BstHHI GCGC 3 cut(s) 707, 1247, 1790
BstKTI GATC 7 cut(s) 364, 731, 1333, 1443, 1612, 1783, 1855
BstMAI GTCTC 5 cut(s) 9, 1189, 1458, 1838, 1933
BstMBI GATC 7 cut(s) 361, 728, 1330, 1440, 1609, 1780, 1852
BstMWI GCNNNNNNNGC 3 cut(s) 782, 1432, 1646
BstNI CCWGG 2 cut(s) 441, 1796
BstNSI RCATGY 2 cut(s) 111, 877
BstSCI CCNGG 2 cut(s) 439, 1794
BstSFI CTRYAG 2 cut(s) 1267, 1596
BstUI CGCG 2 cut(s) 669, 705
BstV1I GCAGC 1 cut(s) 1610
BstV2I GAAGAC 2 cut(s) 150, 691
BstX2I RGATCY 3 cut(s) 1440, 1780, 1852
BstYI RGATCY 3 cut(s) 1440, 1780, 1852
Bsu15I ATCGAT 1 cut(s) 1703
BsuRI GGCC 2 cut(s) 261, 1473
BsuTUI ATCGAT 1 cut(s) 1703
BtgI CCRYGG 2 cut(s) 183, 499
BtsCI GGATG 3 cut(s) 455, 512, 1453
BtsIMutI CAGTG 3 cut(s) 761, 874, 1866
Cac8I GCNNGC 4 cut(s) 27, 109, 875, 1663
CciI TCATGA 1 cut(s) 558
CfoI GCGC 3 cut(s) 707, 1247, 1790
Cfr13I GGNCC 3 cut(s) 1472, 1527, 1816
ClaI ATCGAT 1 cut(s) 1703
CsiI ACCWGGT 1 cut(s) 1794
Csp6I GTAC 4 cut(s) 126, 401, 1283, 1773
CspCI CAANNNNNGTGG 2 cut(s) 942, 977
CviAII CATG 9 cut(s) 104, 108, 136, 184, 500, 559, 874, 1116, 1336
CviQI GTAC 4 cut(s) 126, 401, 1283, 1773
DpnI GATC 7 cut(s) 363, 730, 1332, 1442, 1611, 1782, 1854
DpnII GATC 7 cut(s) 361, 728, 1330, 1440, 1609, 1780, 1852
Ecl136II GAGCTC 3 cut(s) 436, 1393, 1750
Eco130I CCWWGG 5 cut(s) 183, 384, 499, 1711, 1974
Eco147I AGGCCT 1 cut(s) 261
Eco24I GRGCYC 3 cut(s) 438, 1395, 1752
Eco47I GGWCC 2 cut(s) 1527, 1816
Eco47III AGCGCT 1 cut(s) 1246
Eco53kI GAGCTC 3 cut(s) 436, 1393, 1750
EcoICRI GAGCTC 3 cut(s) 436, 1393, 1750
EcoRII CCWGG 2 cut(s) 439, 1794
EcoT14I CCWWGG 5 cut(s) 183, 384, 499, 1711, 1974
EcoT22I ATGCAT 1 cut(s) 109
EcoT38I GRGCYC 3 cut(s) 438, 1395, 1752
ErhI CCWWGG 5 cut(s) 183, 384, 499, 1711, 1974
FaeI CATG 9 cut(s) 107, 111, 139, 187, 503, 562, 877, 1119, 1339
FaqI GGGAC 3 cut(s) 574, 1176, 1507
FatI CATG 9 cut(s) 103, 107, 135, 183, 499, 558, 873, 1115, 1335
FbaI TGATCA 1 cut(s) 1330
Fnu4HI GCNGC 1 cut(s) 1599
FokI GGATG 3 cut(s) 442, 499, 1460
FriOI GRGCYC 3 cut(s) 438, 1395, 1752
Fsp4HI GCNGC 1 cut(s) 1599
FspBI CTAG 7 cut(s) 26, 486, 938, 1046, 1157, 1436, 1712
GlaI GCGC 3 cut(s) 706, 1246, 1789
GluI GCNGC 1 cut(s) 1599
GsuI CTGGAG 3 cut(s) 450, 1024, 1896
HaeII RGCGCY 2 cut(s) 1248, 1791
HaeIII GGCC 2 cut(s) 261, 1473
HapII CCGG 2 cut(s) 369, 1814
HhaI GCGC 3 cut(s) 707, 1247, 1790
Hin1II CATG 9 cut(s) 107, 111, 139, 187, 503, 562, 877, 1119, 1339
Hin6I GCGC 3 cut(s) 705, 1245, 1788
HinP1I GCGC 3 cut(s) 705, 1245, 1788
HincII GTYRAC 2 cut(s) 823, 1052
HindII GTYRAC 2 cut(s) 823, 1052
HindIII AAGCTT 1 cut(s) 1144
HinfI GANTC 8 cut(s) 372, 544, 999, 1353, 1464, 1810, 1864, 1900
HpaI GTTAAC 1 cut(s) 823
HpaII CCGG 2 cut(s) 369, 1814
HphI GGTGA 3 cut(s) 310, 1322, 1340
Hpy166II GTNNAC 3 cut(s) 823, 1052, 1061
Hpy188I TCNGA 4 cut(s) 9, 1543, 1588, 1754
Hpy8I GTNNAC 3 cut(s) 823, 1052, 1061
HpyCH4III ACNGT 3 cut(s) 1282, 1616, 1674
HpyF10VI GCNNNNNNNGC 3 cut(s) 782, 1432, 1646
Hsp92II CATG 9 cut(s) 107, 111, 139, 187, 503, 562, 877, 1119, 1339
HspAI GCGC 3 cut(s) 705, 1245, 1788
Kpn2I TCCGGA 1 cut(s) 1813
Ksp22I TGATCA 1 cut(s) 1330
KspAI GTTAAC 1 cut(s) 823
Kzo9I GATC 7 cut(s) 361, 728, 1330, 1440, 1609, 1780, 1852
LmnI GCTCC 4 cut(s) 86, 441, 924, 1976
Lsp1109I GCAGC 1 cut(s) 1610
LweI GCATC 2 cut(s) 742, 1648
MabI ACCWGGT 1 cut(s) 1794
MaeI CTAG 7 cut(s) 26, 486, 938, 1046, 1157, 1436, 1712
MaeIII GTNAC 3 cut(s) 232, 710, 809
MalI GATC 7 cut(s) 363, 730, 1332, 1442, 1611, 1782, 1854
MboI GATC 7 cut(s) 361, 728, 1330, 1440, 1609, 1780, 1852
MboII GAAGA 8 cut(s) 52, 150, 367, 514, 691, 752, 779, 1627
MflI RGATCY 3 cut(s) 1440, 1780, 1852
MhlI GDGCHC 3 cut(s) 438, 1395, 1752
MlyI GAGTC 2 cut(s) 538, 1909
MmeI TCCRAC 2 cut(s) 550, 1554
Mph1103I ATGCAT 1 cut(s) 109
MroI TCCGGA 1 cut(s) 1813
MroXI GAANNNNTTC 1 cut(s) 682
MseI TTAA 9 cut(s) 170, 417, 822, 858, 1032, 1148, 1190, 1458, 1923
MslI CAYNNNNRTG 2 cut(s) 102, 552
MspI CCGG 2 cut(s) 369, 1814
MspR9I CCNGG 2 cut(s) 441, 1796
MvaI CCWGG 2 cut(s) 441, 1796
MvnI CGCG 2 cut(s) 669, 705
MwoI GCNNNNNNNGC 3 cut(s) 782, 1432, 1646
NcoI CCATGG 2 cut(s) 183, 499
NdeII GATC 7 cut(s) 361, 728, 1330, 1440, 1609, 1780, 1852
NheI GCTAGC 1 cut(s) 25
NlaIII CATG 9 cut(s) 107, 111, 139, 187, 503, 562, 877, 1119, 1339
NlaIV GGNNCC 3 cut(s) 82, 946, 1528
NmeAIII GCCGAG 1 cut(s) 1201
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 2 cut(s) 111, 877
NspV TTCGAA 1 cut(s) 469
PaeI GCATGC 2 cut(s) 111, 877
PagI TCATGA 1 cut(s) 558
PceI AGGCCT 1 cut(s) 261
PdmI GAANNNNTTC 1 cut(s) 682
PfeI GAWTC 6 cut(s) 372, 999, 1353, 1464, 1810, 1864
PflFI GACNNNGTC 1 cut(s) 1047
PkrI GCNGC 1 cut(s) 1600
PleI GAGTC 2 cut(s) 538, 1908
PpsI GAGTC 2 cut(s) 538, 1908
Psp124BI GAGCTC 3 cut(s) 438, 1395, 1752
Psp6I CCWGG 2 cut(s) 439, 1794
PspGI CCWGG 2 cut(s) 439, 1794
PspN4I GGNNCC 3 cut(s) 82, 946, 1528
PspPI GGNCC 3 cut(s) 1472, 1527, 1816
PstI CTGCAG 1 cut(s) 1600
PsuI RGATCY 3 cut(s) 1440, 1780, 1852
PsyI GACNNNGTC 1 cut(s) 1047
RsaI GTAC 4 cut(s) 127, 402, 1284, 1774
RsaNI GTAC 4 cut(s) 126, 401, 1283, 1773
RseI CAYNNNNRTG 2 cut(s) 102, 552
SacI GAGCTC 3 cut(s) 438, 1395, 1752
SaqAI TTAA 9 cut(s) 170, 417, 822, 858, 1032, 1148, 1190, 1458, 1923
SatI GCNGC 1 cut(s) 1599
Sau3AI GATC 7 cut(s) 361, 728, 1330, 1440, 1609, 1780, 1852
Sau96I GGNCC 3 cut(s) 1472, 1527, 1816
SchI GAGTC 2 cut(s) 538, 1909
ScrFI CCNGG 2 cut(s) 441, 1796
SduI GDGCHC 3 cut(s) 438, 1395, 1752
SexAI ACCWGGT 1 cut(s) 1794
SfaNI GCATC 2 cut(s) 742, 1648
SfcI CTRYAG 2 cut(s) 1267, 1596
SfuI TTCGAA 1 cut(s) 469
SinI GGWCC 2 cut(s) 1527, 1816
SmiMI CAYNNNNRTG 2 cut(s) 102, 552
SmlI CTYRAG 4 cut(s) 115, 395, 1427, 1602
SmoI CTYRAG 4 cut(s) 115, 395, 1427, 1602
SphI GCATGC 2 cut(s) 111, 877
SseBI AGGCCT 1 cut(s) 261
SsiI CCGC 2 cut(s) 669, 703
SspI AATATT 1 cut(s) 466
SspMI CTAG 7 cut(s) 26, 486, 938, 1046, 1157, 1436, 1712
SstI GAGCTC 3 cut(s) 438, 1395, 1752
StuI AGGCCT 1 cut(s) 261
StyD4I CCNGG 2 cut(s) 439, 1794
StyI CCWWGG 5 cut(s) 183, 384, 499, 1711, 1974
TaaI ACNGT 3 cut(s) 1282, 1616, 1674
TaqI TCGA 4 cut(s) 229, 469, 1138, 1703
TfiI GAWTC 6 cut(s) 372, 999, 1353, 1464, 1810, 1864
Tru1I TTAA 9 cut(s) 170, 417, 822, 858, 1032, 1148, 1190, 1458, 1923
Tru9I TTAA 9 cut(s) 170, 417, 822, 858, 1032, 1148, 1190, 1458, 1923
TscAI CASTG 3 cut(s) 768, 874, 1866
TseI GCWGC 1 cut(s) 1598
TspDTI ATGAA 6 cut(s) 92, 575, 603, 914, 1265, 1560
TspGWI ACGGA 1 cut(s) 1760
TspRI CASTG 3 cut(s) 768, 874, 1866
Tth111I GACNNNGTC 1 cut(s) 1047
VpaK11BI GGWCC 2 cut(s) 1527, 1816
XapI RAATTY 4 cut(s) 538, 647, 991, 1548
XbaI TCTAGA 2 cut(s) 937, 1156
XceI RCATGY 2 cut(s) 111, 877
XcmI CCANNNNNNNNNTGG 1 cut(s) 1482
XmaJI CCTAGG 1 cut(s) 1711
XmnI GAANNNNTTC 1 cut(s) 682
XspI CTAG 7 cut(s) 26, 486, 938, 1046, 1157, 1436, 1712
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.