Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_L18p | PF00861 | 5 - 74 | 4.9e-08 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 297 |
| AccBSI | CCGCTC | 1 cut(s) | 147 |
| AciI | CCGC | 3 cut(s) | 16, 28, 145 |
| AcoI | YGGCCR | 2 cut(s) | 82, 142 |
| AfaI | GTAC | 2 cut(s) | 50, 289 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 226, 292, 297 |
| AflII | CTTAAG | 1 cut(s) | 200 |
| AgsI | TTSAA | 2 cut(s) | 46, 113 |
| AjnI | CCWGG | 1 cut(s) | 219 |
| Alw21I | GWGCWC | 1 cut(s) | 189 |
| AoxI | GGCC | 2 cut(s) | 82, 142 |
| ApeKI | GCWGC | 3 cut(s) | 25, 164, 167 |
| BanII | GRGCYC | 1 cut(s) | 131 |
| Bbv12I | GWGCWC | 1 cut(s) | 189 |
| BbvI | GCAGC | 3 cut(s) | 12, 176, 179 |
| BciT130I | CCWGG | 1 cut(s) | 221 |
| BfrI | CTTAAG | 1 cut(s) | 200 |
| BisI | GCNGC | 4 cut(s) | 26, 145, 165, 168 |
| BlsI | GCNGC | 4 cut(s) | 27, 146, 166, 169 |
| Bme1390I | CCNGG | 1 cut(s) | 221 |
| BmrFI | CCNGG | 1 cut(s) | 221 |
| BmsI | GCATC | 1 cut(s) | 110 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 171, 203, 321, 353 |
| BpuEI | CTTGAG | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 2 cut(s) | 220, 291 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 226, 292, 297 |
| BseBI | CCWGG | 1 cut(s) | 221 |
| BseDI | CCNNGG | 2 cut(s) | 220, 291 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 226, 292, 297 |
| BseXI | GCAGC | 3 cut(s) | 12, 176, 179 |
| BshFI | GGCC | 2 cut(s) | 84, 144 |
| BsiHKAI | GWGCWC | 1 cut(s) | 189 |
| BsiSI | CCGG | 1 cut(s) | 85 |
| BslFI | GGGAC | 2 cut(s) | 237, 243 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 226, 292, 297 |
| BsmFI | GGGAC | 2 cut(s) | 237, 243 |
| BsnI | GGCC | 2 cut(s) | 84, 144 |
| Bsp1286I | GDGCHC | 2 cut(s) | 131, 189 |
| BspACI | CCGC | 3 cut(s) | 16, 28, 145 |
| BspANI | GGCC | 2 cut(s) | 84, 144 |
| BspTI | CTTAAG | 1 cut(s) | 200 |
| BsrBI | CCGCTC | 1 cut(s) | 147 |
| BssECI | CCNNGG | 2 cut(s) | 220, 291 |
| BssT1I | CCWWGG | 1 cut(s) | 291 |
| Bst2UI | CCWGG | 1 cut(s) | 221 |
| Bst4CI | ACNGT | 1 cut(s) | 287 |
| BstAFI | CTTAAG | 1 cut(s) | 200 |
| BstC8I | GCNNGC | 2 cut(s) | 131, 189 |
| BstDEI | CTNAG | 1 cut(s) | 369 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 22, 150, 164, 193 |
| BstNI | CCWGG | 1 cut(s) | 221 |
| BstSCI | CCNGG | 1 cut(s) | 219 |
| BstV1I | GCAGC | 3 cut(s) | 12, 176, 179 |
| BsuRI | GGCC | 2 cut(s) | 84, 144 |
| Cac8I | GCNNGC | 2 cut(s) | 131, 189 |
| Csp6I | GTAC | 2 cut(s) | 49, 288 |
| CviAII | CATG | 1 cut(s) | 242 |
| CviJI | RGCY | 5 cut(s) | 84, 129, 144, 302, 373 |
| CviKI_1 | RGCY | 5 cut(s) | 84, 129, 144, 302, 373 |
| CviQI | GTAC | 2 cut(s) | 49, 288 |
| DdeI | CTNAG | 1 cut(s) | 369 |
| EaeI | YGGCCR | 2 cut(s) | 82, 142 |
| Eco130I | CCWWGG | 1 cut(s) | 291 |
| Eco24I | GRGCYC | 1 cut(s) | 131 |
| EcoRII | CCWGG | 1 cut(s) | 219 |
| EcoT14I | CCWWGG | 1 cut(s) | 291 |
| EcoT38I | GRGCYC | 1 cut(s) | 131 |
| ErhI | CCWWGG | 1 cut(s) | 291 |
| FaeI | CATG | 1 cut(s) | 245 |
| FaiI | YATR | 6 cut(s) | 11, 21, 38, 194, 243, 298 |
| FaqI | GGGAC | 2 cut(s) | 237, 243 |
| FatI | CATG | 1 cut(s) | 241 |
| Fnu4HI | GCNGC | 4 cut(s) | 26, 145, 165, 168 |
| FriOI | GRGCYC | 1 cut(s) | 131 |
| Fsp4HI | GCNGC | 4 cut(s) | 26, 145, 165, 168 |
| GluI | GCNGC | 4 cut(s) | 26, 145, 165, 168 |
| HaeIII | GGCC | 2 cut(s) | 84, 144 |
| HapII | CCGG | 1 cut(s) | 85 |
| Hin1II | CATG | 1 cut(s) | 245 |
| HincII | GTYRAC | 1 cut(s) | 70 |
| HindII | GTYRAC | 1 cut(s) | 70 |
| HinfI | GANTC | 2 cut(s) | 4, 238 |
| HpaII | CCGG | 1 cut(s) | 85 |
| Hpy166II | GTNNAC | 1 cut(s) | 70 |
| Hpy188III | TCNNGA | 2 cut(s) | 215, 344 |
| Hpy8I | GTNNAC | 1 cut(s) | 70 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 2 cut(s) | 203, 265 |
| HpyCH4III | ACNGT | 1 cut(s) | 287 |
| HpyCH4IV | ACGT | 1 cut(s) | 63 |
| HpyCH4V | TGCA | 1 cut(s) | 153 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 22, 150, 164, 193 |
| HpyF3I | CTNAG | 1 cut(s) | 369 |
| HpySE526I | ACGT | 1 cut(s) | 63 |
| Hsp92II | CATG | 1 cut(s) | 245 |
| LpnPI | CCDG | 4 cut(s) | 98, 206, 212, 233 |
| Lsp1109I | GCAGC | 3 cut(s) | 12, 176, 179 |
| LweI | GCATC | 1 cut(s) | 110 |
| MaeII | ACGT | 1 cut(s) | 63 |
| MaeIII | GTNAC | 1 cut(s) | 94 |
| MbiI | CCGCTC | 1 cut(s) | 147 |
| MboII | GAAGA | 1 cut(s) | 280 |
| MfeI | CAATTG | 1 cut(s) | 108 |
| MhlI | GDGCHC | 2 cut(s) | 131, 189 |
| MluCI | AATT | 1 cut(s) | 108 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MmeI | TCCRAC | 1 cut(s) | 157 |
| MnlI | CCTC | 2 cut(s) | 175, 227 |
| MseI | TTAA | 6 cut(s) | 123, 201, 279, 318, 333, 379 |
| MslI | CAYNNNNRTG | 1 cut(s) | 246 |
| MspCI | CTTAAG | 1 cut(s) | 200 |
| MspI | CCGG | 1 cut(s) | 85 |
| MspR9I | CCNGG | 1 cut(s) | 221 |
| MunI | CAATTG | 1 cut(s) | 108 |
| MvaI | CCWGG | 1 cut(s) | 221 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 22, 150, 164, 193 |
| NlaIII | CATG | 1 cut(s) | 245 |
| PfeI | GAWTC | 1 cut(s) | 238 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 297 |
| PkrI | GCNGC | 4 cut(s) | 27, 146, 166, 169 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| Psp6I | CCWGG | 1 cut(s) | 219 |
| PspGI | CCWGG | 1 cut(s) | 219 |
| RsaI | GTAC | 2 cut(s) | 50, 289 |
| RsaNI | GTAC | 2 cut(s) | 49, 288 |
| RseI | CAYNNNNRTG | 1 cut(s) | 246 |
| SaqAI | TTAA | 6 cut(s) | 123, 201, 279, 318, 333, 379 |
| SatI | GCNGC | 4 cut(s) | 26, 145, 165, 168 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 221 |
| SduI | GDGCHC | 2 cut(s) | 131, 189 |
| SetI | ASST | 5 cut(s) | 66, 186, 207, 214, 297 |
| SfaNI | GCATC | 1 cut(s) | 110 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 246 |
| SmlI | CTYRAG | 2 cut(s) | 134, 200 |
| SmoI | CTYRAG | 2 cut(s) | 134, 200 |
| Sse9I | AATT | 1 cut(s) | 108 |
| SsiI | CCGC | 3 cut(s) | 16, 28, 145 |
| StyD4I | CCNGG | 1 cut(s) | 219 |
| StyI | CCWWGG | 1 cut(s) | 291 |
| TaaI | ACNGT | 1 cut(s) | 287 |
| TaiI | ACGT | 1 cut(s) | 66 |
| TasI | AATT | 1 cut(s) | 108 |
| TatI | WGTACW | 1 cut(s) | 48 |
| TauI | GCSGC | 1 cut(s) | 147 |
| TfiI | GAWTC | 1 cut(s) | 238 |
| Tru1I | TTAA | 6 cut(s) | 123, 201, 279, 318, 333, 379 |
| Tru9I | TTAA | 6 cut(s) | 123, 201, 279, 318, 333, 379 |
| TseI | GCWGC | 3 cut(s) | 25, 164, 167 |
| TspDTI | ATGAA | 5 cut(s) | 25, 26, 230, 273, 372 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 297 |
| Vha464I | CTTAAG | 1 cut(s) | 200 |