MD11G1248200.v1.1

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
36026311 .. 36028611
2301 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1248200.v1.1.491

Sequence Viewer

Length: 2301 bp
ATGGCTCATGACTTCCTCTTTGTCTTCTTATTCTCTTTCATTATATCTACAACAAATATTCATGCAAGCAAAGACATAGAATGCACCACTCTCATGGCCTTCGCCCGCACGCTATCTTCCCCTCCTGTAAATTGGAATACTTCTGTTGATTACTGTCGTTGGAATGGCATCATTTGTAATCAGGAGGGTTGGGTCACTCATTTGCTCTTACCCTCCAAAGGGCTCATAGGAGGTATGTTTGTCTCATCACTTGCAAATCTCACATATCTCACTCACTTGAACCTTTCCCACAATTCACTTTATGGCACACTTGAAATCAAATTCTTCTCGTCCTTGAATCACCTCAAGATCATTGATTTGAGCTACAACCTTCTTTCTGGAGAGATACTCTTTTCTCTACCACCCAAAAATATTCAGACAATAGATTTGTCAAGCAATCACTTCTATGGTGCAATTCCCTCTTCTTTTCTCCAACAAGCTTGGAATTTGACTAGTTTCAATGTCAGCAACAACACCTTCTCTAGGTATATCCCTACATCTATTTGTCTCCAATCATCTCCTTCCATAAGAGTATTGGATTTTTCCTCCAATGAATTTAGTGGCAAATTTTCTCATGGGCTCGGGGGGTGTTCCAAATTGCAGATTCTTCGTGCTGGTCACAATAATTTGTCAGGATCACTTCCGGAAGACATCTATAATGCTACCAAACTTGAGGAACTTGTATTACCTCTCAATTCACTAAATGGAGCCATTAGTGAAAGAATTGCCAACCTCACCTACCTCACAATCCTTGACCTCTATTTTAATTATTTGAGTGGTGTGATCCCTCTCAATTTCGGGAAGCTCTCCAAGTTGAAATTCATGAATTTTGATTCCAACAACTTAGAAGGTAAGTTGCCCTCATCTTTGATGAATTGCACAAACCTCGTAGAACTACATTTGGGATTCAACTACTTGGAAGGAGACCTCACCACGCCTAATTTCTCCAAACTCAGCCACCTTAGTAAACTTGACCTAATTCGGAATAACTTCACTGGTGTCTTGCCGATAAGCCTTTACTCATGCAAGTCCCTTAAAGCAATTCGGTTGAGTGTTAATCCTGATGTAGAAGGACAAATACAACCTGAGATTCTTTCATTGAAATCCTTGTCCTTCCTCTCGCTTGGTAATTTACGGTTGACCAATCTCACAGGGGCAATTAAGATATTAATGGGTTGCAAAAGTCTTCGCACACTCATCCTTGGTGGTTCGTTTTCCCACGAAGCAATGCCAACTGATGATGACATGATTGATTTTCACGGATTCCAAAATCTTCATTTATTGAGTTTGACTTCATGTAGGCTCACTGGTCAAATACCTGGTTGGTTATCAAACCTAAAGAATCTAGAGTTGTTATTTCTAGCTAATAATCAAATCACAGGGTCAATTCCAAGTTGGTTGGGGAATCTTCCAAAACTCTTTTATGTGGATTTGGCATACAATAAGATTTCAGGTGATTTTCCCAAACAACTTTGTAGATTACCAAGGTTGGAGGTGAATGCACCCCCAATAGGCAATTATGAATTTGAACTTCCCATCTCTAGCTCCGTATATAAAAAGGTATATGTTTGGGCTCGTCGAACGTATATTGTTCGAGGTTTAATTGACCTATCAACAAATAACATTAATGGTAGTATACCTACTGAGATCGGCCAATTGCAGTCTCTTGGATATTTGTTTCTTGATCACAACAACTTCTCCGGCAACATTCCAAACCAAATATCTAACTTACAGTATTTAGAGACTTTGGACCTTTCCATGAATCATTTGTCCGGAAAAATCCCTTGGTCCATGACGAGCCTTAATTTCTTGAGCATTTTTAATGTCTCGACGAATCATTTGTCCGGAAAAATCCCTTGGTCCATGACGAGCCTTAATTTCTTGAATGAATTTGATGTCTCATACAATAATCTAGAAGGAAAAATACCAACGAGCACGCAGCTCCAGAACTTCAATGCTTCTGCATTTGAGGGGAACCCTAAACTCTGTGGTGCTCCACTTCCAAATGAGTGCAGAGAAATTGATGCATATAACAAGAATATCGTCGACCAAGATGCCAACAACAAAGGTGATGAGCTTCCCTGGTTTTATATTTTTGCCACCCTAGGTTTCATTGTCGGATTTTGGGGAGTTTGCGGCTCTTTATTTCTTAAGAAGACATGGAGGTATTCGTATTTTCAGTTTCTGGATAATGTACAAGATTCGCTCTATGTGAAGATGGCAGTATGCATGGGCAAGATGAAGAGAAGGATTAGGGACTAG

Protein Analysis

767

Amino Acids

85.86

Weight (kDa)

7.55

Isoelectric Point (pI)

33.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 260 - 319 1e-05 Leucine rich repeat
LRR_14 PF23598 329 - 511 7.8e-06 Leucine-rich repeat region
LRR_8 PF13855 437 - 496 1.2e-10 Leucine rich repeat
LRR_14 PF23598 558 - 647 9.6e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 1675, 2085
AccIII TCCGGA 3 cut(s) 682, 1811, 1883
AciI CCGC 2 cut(s) 106, 2175
AclWI GGATC 2 cut(s) 682, 817
AcoI YGGCCR 1 cut(s) 1690
AcsI RAATTY 8 cut(s) 320, 484, 593, 605, 857, 865, 1562, 1928
AfaI GTAC 1 cut(s) 2235
AfiI CCNNNNNNNGG 4 cut(s) 218, 219, 522, 1550
AflII CTTAAG 1 cut(s) 2189
AhlI ACTAGT 1 cut(s) 491
AjnI CCWGG 2 cut(s) 1357, 2120
AjuI GAANNNNNNNTTGG 6 cut(s) 842, 874, 1807, 1839, 1879, 1911
AluBI AGCT 7 cut(s) 363, 479, 844, 1403, 1584, 1981, 2116
AluI AGCT 7 cut(s) 363, 479, 844, 1403, 1584, 1981, 2116
Alw21I GWGCWC 2 cut(s) 1976, 2035
Alw26I GTCTC 7 cut(s) 247, 551, 957, 1707, 1775, 1870, 1942
AlwI GGATC 2 cut(s) 682, 817
AlwNI CAGNNNCTG 1 cut(s) 2224
Ama87I CYCGRG 1 cut(s) 620
Aor13HI TCCGGA 3 cut(s) 682, 1811, 1883
AoxI GGCC 2 cut(s) 96, 1690
ApeKI GCWGC 1 cut(s) 1978
ApoI RAATTY 8 cut(s) 320, 484, 593, 605, 857, 865, 1562, 1928
ArsI GACNNNNNNTTYG 7 cut(s) 34, 409, 441, 1861, 1865, 1893, 1897
AseI ATTAAT 2 cut(s) 1208, 1665
Asp700I GAANNNNTTC 1 cut(s) 1028
AspA2I CCTAGG 1 cut(s) 2143
AspS9I GGNCC 3 cut(s) 1789, 1827, 1899
AsuHPI GGTGA 6 cut(s) 332, 766, 961, 1505, 1546, 2120
AvaI CYCGRG 1 cut(s) 620
AvaII GGWCC 3 cut(s) 1789, 1827, 1899
AvrII CCTAGG 1 cut(s) 2143
BanII GRGCYC 3 cut(s) 225, 621, 1615
BarI GAAGNNNNNNTAC 4 cut(s) 1101, 1133, 1947, 1979
BbsI GAAGAC 4 cut(s) 16, 693, 1217, 2201
Bbv12I GWGCWC 2 cut(s) 1976, 2035
BbvI GCAGC 1 cut(s) 1990
BccI CCATC 2 cut(s) 1583, 2251
BcgI CGANNNNNNTGC 6 cut(s) 629, 663, 907, 941, 2075, 2109
BciT130I CCWGG 2 cut(s) 1359, 2122
BclI TGATCA 1 cut(s) 1723
BcoDI GTCTC 7 cut(s) 247, 551, 957, 1707, 1775, 1870, 1942
BcuI ACTAGT 1 cut(s) 491
BfaI CTAG 8 cut(s) 492, 522, 1385, 1400, 1581, 1952, 2144, 2299
BfrI CTTAAG 1 cut(s) 2189
BisI GCNGC 2 cut(s) 1979, 2176
BlnI CCTAGG 1 cut(s) 2143
BlsI GCNGC 2 cut(s) 1980, 2177
Bme1390I CCNGG 2 cut(s) 1359, 2122
Bme18I GGWCC 3 cut(s) 1789, 1827, 1899
BmeT110I CYCGRG 1 cut(s) 620
BmgT120I GGNCC 3 cut(s) 1789, 1827, 1899
BmiI GGNNCC 2 cut(s) 748, 2015
BmrFI CCNGG 2 cut(s) 1359, 2122
BmsI GCATC 3 cut(s) 177, 2053, 2083
BpiI GAAGAC 4 cut(s) 16, 693, 1217, 2201
BplI GAGNNNNNCTC 2 cut(s) 372, 404
BpmI CTGGAG 2 cut(s) 399, 1967
BpuEI CTTGAG 3 cut(s) 329, 731, 1870
BsaI GGTCTC 1 cut(s) 957
BsaJI CCNNGG 6 cut(s) 1240, 1523, 1823, 1895, 2120, 2143
BsaWI WCCGGW 3 cut(s) 682, 1811, 1883
BsaXI ACNNNNNCTCC 2 cut(s) 1721, 1751
Bsc4I CCNNNNNNNGG 4 cut(s) 218, 219, 522, 1550
Bse1I ACTGG 2 cut(s) 1039, 1351
Bse3DI GCAATG 1 cut(s) 1272
BseAI TCCGGA 3 cut(s) 682, 1811, 1883
BseBI CCWGG 2 cut(s) 1359, 2122
BseDI CCNNGG 6 cut(s) 1240, 1523, 1823, 1895, 2120, 2143
BseGI GGATG 1 cut(s) 1236
BseLI CCNNNNNNNGG 4 cut(s) 218, 219, 522, 1550
BseMI GCAATG 1 cut(s) 1272
BseMII CTCAG 3 cut(s) 1006, 1116, 1674
BseNI ACTGG 2 cut(s) 1039, 1351
BseXI GCAGC 1 cut(s) 1990
BsgI GTGCAG 1 cut(s) 2071
BshFI GGCC 2 cut(s) 98, 1692
BsiHKAI GWGCWC 2 cut(s) 1976, 2035
BsiHKCI CYCGRG 1 cut(s) 620
BsiSI CCGG 4 cut(s) 683, 1740, 1812, 1884
BslFI GGGAC 1 cut(s) 1054
BslI CCNNNNNNNGG 4 cut(s) 218, 219, 522, 1550
BsmAI GTCTC 7 cut(s) 247, 551, 957, 1707, 1775, 1870, 1942
BsmFI GGGAC 1 cut(s) 1054
BsmI GAATGC 2 cut(s) 86, 1543
BsnI GGCC 2 cut(s) 98, 1692
Bso31I GGTCTC 1 cut(s) 957
BsoBI CYCGRG 1 cut(s) 620
Bsp1286I GDGCHC 5 cut(s) 225, 621, 1615, 1976, 2035
Bsp13I TCCGGA 3 cut(s) 682, 1811, 1883
Bsp1407I TGTACA 1 cut(s) 2233
Bsp143I GATC 5 cut(s) 348, 674, 822, 1686, 1723
BspACI CCGC 2 cut(s) 106, 2175
BspANI GGCC 2 cut(s) 98, 1692
BspCNI CTCAG 3 cut(s) 1005, 1117, 1675
BspEI TCCGGA 3 cut(s) 682, 1811, 1883
BspHI TCATGA 2 cut(s) 7, 861
BspLI GGNNCC 2 cut(s) 748, 2015
BspPI GGATC 2 cut(s) 682, 817
BspTI CTTAAG 1 cut(s) 2189
BspTNI GGTCTC 1 cut(s) 957
BsrDI GCAATG 1 cut(s) 1272
BsrGI TGTACA 1 cut(s) 2233
BsrI ACTGG 2 cut(s) 1039, 1351
BssECI CCNNGG 6 cut(s) 1240, 1523, 1823, 1895, 2120, 2143
BssMI GATC 5 cut(s) 348, 674, 822, 1686, 1723
BssNAI GTATAC 1 cut(s) 1676
BssT1I CCWWGG 5 cut(s) 1240, 1523, 1823, 1895, 2143
Bst1107I GTATAC 1 cut(s) 1676
Bst2UI CCWGG 2 cut(s) 1359, 2122
Bst4CI ACNGT 3 cut(s) 155, 1176, 1773
Bst6I CTCTTC 2 cut(s) 466, 2276
BstAFI CTTAAG 1 cut(s) 2189
BstAUI TGTACA 1 cut(s) 2233
BstC8I GCNNGC 4 cut(s) 67, 106, 110, 1976
BstDEI CTNAG 5 cut(s) 883, 992, 1001, 1125, 1683
BstENI CCTNNNNNAGG 1 cut(s) 520
BstF5I GGATG 1 cut(s) 1236
BstKTI GATC 5 cut(s) 351, 677, 825, 1689, 1726
BstMAI GTCTC 7 cut(s) 247, 551, 957, 1707, 1775, 1870, 1942
BstMBI GATC 5 cut(s) 348, 674, 822, 1686, 1723
BstNI CCWGG 2 cut(s) 1359, 2122
BstSCI CCNGG 2 cut(s) 1357, 2120
BstV1I GCAGC 1 cut(s) 1990
BstV2I GAAGAC 4 cut(s) 16, 693, 1217, 2201
BstXI CCANNNNNNTGG 1 cut(s) 94
BstZ17I GTATAC 1 cut(s) 1676
BsuRI GGCC 2 cut(s) 98, 1692
BtsCI GGATG 1 cut(s) 1236
BtsIMutI CAGTG 2 cut(s) 1032, 1344
Cac8I GCNNGC 4 cut(s) 67, 106, 110, 1976
CaiI CAGNNNCTG 1 cut(s) 2224
CciI TCATGA 2 cut(s) 7, 861
Cfr13I GGNCC 3 cut(s) 1789, 1827, 1899
CsiI ACCWGGT 1 cut(s) 1357
Csp6I GTAC 1 cut(s) 2234
CviQI GTAC 1 cut(s) 2234
DdeI CTNAG 5 cut(s) 883, 992, 1001, 1125, 1683
DpnI GATC 5 cut(s) 350, 676, 824, 1688, 1725
DpnII GATC 5 cut(s) 348, 674, 822, 1686, 1723
EaeI YGGCCR 1 cut(s) 1690
Eam1104I CTCTTC 2 cut(s) 466, 2276
EarI CTCTTC 2 cut(s) 466, 2276
Eco130I CCWWGG 5 cut(s) 1240, 1523, 1823, 1895, 2143
Eco24I GRGCYC 3 cut(s) 225, 621, 1615
Eco31I GGTCTC 1 cut(s) 957
Eco47I GGWCC 3 cut(s) 1789, 1827, 1899
Eco88I CYCGRG 1 cut(s) 620
EcoNI CCTNNNNNAGG 1 cut(s) 520
EcoRII CCWGG 2 cut(s) 1357, 2120
EcoT14I CCWWGG 5 cut(s) 1240, 1523, 1823, 1895, 2143
EcoT22I ATGCAT 2 cut(s) 2068, 2270
EcoT38I GRGCYC 3 cut(s) 225, 621, 1615
ErhI CCWWGG 5 cut(s) 1240, 1523, 1823, 1895, 2143
FaqI GGGAC 1 cut(s) 1054
FauI CCCGC 1 cut(s) 113
FbaI TGATCA 1 cut(s) 1723
FblI GTMKAC 2 cut(s) 1675, 2085
Fnu4HI GCNGC 2 cut(s) 1979, 2176
FokI GGATG 1 cut(s) 1223
FriOI GRGCYC 3 cut(s) 225, 621, 1615
Fsp4HI GCNGC 2 cut(s) 1979, 2176
FspBI CTAG 8 cut(s) 492, 522, 1385, 1400, 1581, 1952, 2144, 2299
GluI GCNGC 2 cut(s) 1979, 2176
GsuI CTGGAG 2 cut(s) 399, 1967
HaeIII GGCC 2 cut(s) 98, 1692
HapII CCGG 4 cut(s) 683, 1740, 1812, 1884
HincII GTYRAC 2 cut(s) 1179, 2086
HindII GTYRAC 2 cut(s) 1179, 2086
HindIII AAGCTT 1 cut(s) 477
HpaII CCGG 4 cut(s) 683, 1740, 1812, 1884
HphI GGTGA 6 cut(s) 332, 766, 961, 1505, 1546, 2120
Hpy166II GTNNAC 4 cut(s) 1007, 1179, 1676, 2086
Hpy188I TCNGA 3 cut(s) 417, 1023, 2159
Hpy8I GTNNAC 4 cut(s) 1007, 1179, 1676, 2086
Hpy99I CGWCG 3 cut(s) 1620, 1873, 2087
HpyCH4III ACNGT 3 cut(s) 155, 1176, 1773
HpyCH4IV ACGT 1 cut(s) 1622
HpyF3I CTNAG 5 cut(s) 883, 992, 1001, 1125, 1683
HpySE526I ACGT 1 cut(s) 1622
Kpn2I TCCGGA 3 cut(s) 682, 1811, 1883
Ksp22I TGATCA 1 cut(s) 1723
Kzo9I GATC 5 cut(s) 348, 674, 822, 1686, 1723
LmnI GCTCC 4 cut(s) 746, 1589, 1986, 2038
Lsp1109I GCAGC 1 cut(s) 1990
LweI GCATC 3 cut(s) 177, 2053, 2083
MabI ACCWGGT 1 cut(s) 1357
MaeI CTAG 8 cut(s) 492, 522, 1385, 1400, 1581, 1952, 2144, 2299
MaeII ACGT 1 cut(s) 1622
MaeIII GTNAC 2 cut(s) 193, 656
MalI GATC 5 cut(s) 350, 676, 824, 1688, 1725
MboI GATC 5 cut(s) 348, 674, 822, 1686, 1723
MfeI CAATTG 1 cut(s) 1694
MhlI GDGCHC 5 cut(s) 225, 621, 1615, 1976, 2035
MmeI TCCRAC 5 cut(s) 140, 496, 900, 1509, 2137
Mph1103I ATGCAT 2 cut(s) 2068, 2270
MroI TCCGGA 3 cut(s) 682, 1811, 1883
MroXI GAANNNNTTC 1 cut(s) 1028
MslI CAYNNNNRTG 2 cut(s) 92, 444
MspCI CTTAAG 1 cut(s) 2189
MspI CCGG 4 cut(s) 683, 1740, 1812, 1884
MspR9I CCNGG 2 cut(s) 1359, 2122
MunI CAATTG 1 cut(s) 1694
Mva1269I GAATGC 2 cut(s) 86, 1543
MvaI CCWGG 2 cut(s) 1359, 2122
NdeII GATC 5 cut(s) 348, 674, 822, 1686, 1723
NlaIV GGNNCC 2 cut(s) 748, 2015
NmuCI GTSAC 2 cut(s) 193, 656
NsiI ATGCAT 2 cut(s) 2068, 2270
PagI TCATGA 2 cut(s) 7, 861
PctI GAATGC 2 cut(s) 86, 1543
PdmI GAANNNNTTC 1 cut(s) 1028
PkrI GCNGC 2 cut(s) 1980, 2177
PshBI ATTAAT 2 cut(s) 1208, 1665
Psp6I CCWGG 2 cut(s) 1357, 2120
PspGI CCWGG 2 cut(s) 1357, 2120
PspN4I GGNNCC 2 cut(s) 748, 2015
PspPI GGNCC 3 cut(s) 1789, 1827, 1899
PsrI GAACNNNNNNTAC 2 cut(s) 708, 740
PstNI CAGNNNCTG 1 cut(s) 2224
RsaI GTAC 1 cut(s) 2235
RsaNI GTAC 1 cut(s) 2234
RseI CAYNNNNRTG 2 cut(s) 92, 444
SalI GTCGAC 1 cut(s) 2084
SatI GCNGC 2 cut(s) 1979, 2176
Sau3AI GATC 5 cut(s) 348, 674, 822, 1686, 1723
Sau96I GGNCC 3 cut(s) 1789, 1827, 1899
ScrFI CCNGG 2 cut(s) 1359, 2122
SduI GDGCHC 5 cut(s) 225, 621, 1615, 1976, 2035
SexAI ACCWGGT 1 cut(s) 1357
SfaNI GCATC 3 cut(s) 177, 2053, 2083
SinI GGWCC 3 cut(s) 1789, 1827, 1899
SmiMI CAYNNNNRTG 2 cut(s) 92, 444
SmlI CTYRAG 4 cut(s) 344, 710, 1849, 2189
SmoI CTYRAG 4 cut(s) 344, 710, 1849, 2189
SpeI ACTAGT 1 cut(s) 491
SsiI CCGC 2 cut(s) 106, 2175
SspI AATATT 2 cut(s) 58, 412
SspMI CTAG 8 cut(s) 492, 522, 1385, 1400, 1581, 1952, 2144, 2299
StyD4I CCNGG 2 cut(s) 1357, 2120
StyI CCWWGG 5 cut(s) 1240, 1523, 1823, 1895, 2143
TaaI ACNGT 3 cut(s) 155, 1176, 1773
TaiI ACGT 1 cut(s) 1625
TaqI TCGA 4 cut(s) 1618, 1633, 1868, 2085
TatI WGTACW 1 cut(s) 2233
TauI GCSGC 1 cut(s) 2178
TscAI CASTG 2 cut(s) 1039, 1351
TseFI GTSAC 2 cut(s) 193, 656
TseI GCWGC 1 cut(s) 1978
Tsp45I GTSAC 2 cut(s) 193, 656
TspGWI ACGGA 2 cut(s) 1314, 1576
TspRI CASTG 2 cut(s) 1039, 1351
Vha464I CTTAAG 1 cut(s) 2189
VpaK11BI GGWCC 3 cut(s) 1789, 1827, 1899
VspI ATTAAT 2 cut(s) 1208, 1665
XagI CCTNNNNNAGG 1 cut(s) 520
XapI RAATTY 8 cut(s) 320, 484, 593, 605, 857, 865, 1562, 1928
XbaI TCTAGA 2 cut(s) 1384, 1951
XcmI CCANNNNNNNNNTGG 1 cut(s) 571
XmaJI CCTAGG 1 cut(s) 2143
XmiI GTMKAC 2 cut(s) 1675, 2085
XmnI GAANNNNTTC 1 cut(s) 1028
XspI CTAG 8 cut(s) 492, 522, 1385, 1400, 1581, 1952, 2144, 2299
Zsp2I ATGCAT 2 cut(s) 2068, 2270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.