MD03G1022100.v1.1

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
1772293 .. 1774350
2058 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1022100.v1.1.491

Sequence Viewer

Length: 2058 bp
ATGGGTCATCCAATTTCTCATGGCTTCCTTCTCATCCTCTTATTTTCTTCCATTATATTTACAAAGCATGCATGCGATCTAGCCGAACGTAACGCTCTCTCTTCCTTGTTAATCACTCAGTCTTCCCCTCCATTAAACTGGACTGCTTCAGTTGATTGTTGCCAATGGGAAGGCATCACTTGTGATCAGGGAGGTCGGATCATCCGATTGCAGTTGCCATCCAAAGGCCTCAAAGGAGGTATGTTTCTCTCATCGCTAAAAAACCTGACGCATCTTTCGCACCTCAACCTCTCCCACAATCTGCTTTCCGGTCCTGTGGATGCTGGGCTCTTTTTGGCCTTGATTCATCTTGAGATCCTTGATTTGAGTTTTAACCTTCTCTCAGGCCAAATATCTTCCTCAATCTGTTTTAATTCTTCTTTGGTTCGAGTCTTGGATTTCTCCGACAATGATTTCAAGGGTTCGATTCCTCTCGGACTAGGAAATTGTTCCAAATTGGAAGTCTTTCGTGCAGGCTTTAATACTCTCTCCGGGTTCCTTCCTAGTGATATCTACAATGCTCAAACACTTCAAGAAATTTCATTACCTTACAATAAGATTTCCGGCCCCATTGGTGAAAACATTCTAAACCTTACCAATCTCAGAATCATGGACCTCTCCTTTAATCAGGTGAGGGGCATACTTCCCCTCCATATTGGGAAGCTCTCCAAATTAGAGCTCATGCTGCTTCACTACAACAATCTAGAAGGTCCGCTGCCCCTATCATTGTTGAATTGCACAAACCTTATTGAACTAAATCTGGGCTTCAACCGTTTTAGTGGGAATATCTCTGCACTTGATTTCTCGAAACTTACTGAACTTAGTAAACTCGATTTTGTATATAATACGTTCACTGGTATCTTTCCGATAAGCCTTTACTCATGCAAATCCCTCAAAGCACTTCGACTGGCTACAAATGATCTTGAAGGGCAAATACAACCTGAGATTCTTTCATTGAAATCCTTGTCCTTCCTCTCGCTTTCTGAAAACAGATTCACCAACGTTAAGGGGGCAATGAAAATACTGAAGCATTTCAAAGGTCTAAGGGTACTCCTCCTTTCTAAAACTTTTCAAGGTGAAGAAATGCCGGACGGGAATATCATTGTTGATTATGGGTTACATAATCTCTGTGTTTTCAGTTTATATAGCTGTCACTTGACAGGTCAAGTACCTGCATGGATCTCGAAGCTCAAGAAACTGGAAGTCCTGGATTTGTCTTTTAACAGACTCACTGGTTCAATACCTGGTTGGTTGGGGAATCTTCCAAGTCTTTTCTTTGTATGGTTGAATAATAACTTGATTTCAGGTGAATTTCCGAAGGAGCTTTGCAGACTACAAGCATTGGTATCGCAATATGCTCCAAATCAAACAGCCCAGGGTTATCATTTTGAGTTTCCCATCTACTTCCTACGCGATGATAATTCATCTTTACATTCTTCACAGTACAAGTATCCATCCAGCATGCCAAGAGCAATCTCCCTCAAGAACAACAGTCTAAGTGGCAATATACCCTTTGAGATTGGCCAATTGCAATATCTTCAAAAATTGGATCTTAGCGTCAACAACTTCTCCGGCAATATTCCAAACCAAATATCAAACCTCAAAAACTTGGAGACATTAGACCTCTCAAGAAATCATCTATCTGGCGGAATCCCAGCATCACTGTCAAGTCTTAATTTCTTGGCTTCATTTAGTGTTGCGTACAATAATCTAGAAGGATCGATACCAACCGGCACGCAGCTCCAAGGCTTCGGTGCCACCGCCTTTGAGAGTAACCCTGGACTTTGTGGCTCCCCGCTTCCAAACGAGTGCGGACAGATGAATACAAGTAATAATACAACTGAGAACATGGAAGATGTAAAAGGAAATGGGAATGAAATTCCATGGTTTCGTATTTCTGTGGCTCTTGGTTTCATTGTAGGATTTTTAGGAGTTTGTGGCCCTTTAGCTTTGAGCCGGTCATGGCGATATGCATATTTTCAGTTTCTCTCCAATGTTAAAGATCACTTTGTGTGCTAA

Protein Analysis

686

Amino Acids

75.58

Weight (kDa)

6.95

Isoelectric Point (pI)

33.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 207 - 448 2.6e-08 Leucine-rich repeat region
LRR_8 PF13855 391 - 447 3e-07 Leucine rich repeat
LRR_14 PF23598 506 - 579 3.7e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1219
AccB1I GGYRCC 1 cut(s) 1793
AccII CGCG 1 cut(s) 1452
AciI CCGC 5 cut(s) 752, 1686, 1800, 1835, 1851
AclI AACGTT 1 cut(s) 1041
AclWI GGATC 5 cut(s) 206, 349, 1226, 1596, 1765
AcoI YGGCCR 1 cut(s) 1561
AcsI RAATTY 3 cut(s) 576, 1349, 1917
AcuI CTGAAG 2 cut(s) 132, 1085
AdeI CACNNNGTG 1 cut(s) 2050
AfaI GTAC 4 cut(s) 1089, 1209, 1484, 1742
AfiI CCNNNNNNNGG 1 cut(s) 224
AjnI CCWGG 4 cut(s) 1245, 1282, 1413, 1816
AluBI AGCT 7 cut(s) 703, 718, 1188, 1228, 1363, 1780, 1988
AluI AGCT 7 cut(s) 703, 718, 1188, 1228, 1363, 1780, 1988
Alw21I GWGCWC 1 cut(s) 720
Alw26I GTCTC 1 cut(s) 1646
AlwI GGATC 5 cut(s) 206, 349, 1226, 1596, 1765
AoxI GGCC 6 cut(s) 226, 336, 385, 604, 1561, 1978
ApeKI GCWGC 3 cut(s) 724, 754, 1777
ApoI RAATTY 3 cut(s) 576, 1349, 1917
ArsI GACNNNNNNTTYG 4 cut(s) 259, 291, 486, 518
Asp700I GAANNNNTTC 4 cut(s) 487, 504, 621, 1070
AspS9I GGNCC 5 cut(s) 311, 605, 652, 749, 1979
AsuC2I CCSGG 1 cut(s) 532
AsuHPI GGTGA 5 cut(s) 626, 682, 1027, 1127, 1358
AvaII GGWCC 3 cut(s) 311, 652, 749
BalI TGGCCA 1 cut(s) 1563
BanI GGYRCC 1 cut(s) 1793
BanII GRGCYC 2 cut(s) 330, 720
BarI GAAGNNNNNNTAC 4 cut(s) 957, 989, 1746, 1778
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 720
BbvI GCAGC 3 cut(s) 711, 741, 1789
BccI CCATC 3 cut(s) 226, 1445, 1501
BcgI CGANNNNNNTGC 4 cut(s) 1203, 1237, 1368, 1402
BciT130I CCWGG 4 cut(s) 1247, 1284, 1415, 1818
BciVI GTATCC 1 cut(s) 1500
BclI TGATCA 1 cut(s) 184
BcnI CCSGG 1 cut(s) 532
BcoDI GTCTC 1 cut(s) 1646
BfaI CTAG 5 cut(s) 80, 479, 543, 743, 1751
BfuAI ACCTGC 1 cut(s) 1219
BfuI GTATCC 1 cut(s) 1500
BisI GCNGC 3 cut(s) 725, 755, 1778
BlsI GCNGC 3 cut(s) 726, 756, 1779
Bme1390I CCNGG 5 cut(s) 532, 1247, 1284, 1415, 1818
Bme18I GGWCC 3 cut(s) 311, 652, 749
BmgT120I GGNCC 5 cut(s) 311, 605, 652, 749, 1979
BmiI GGNNCC 4 cut(s) 536, 607, 1795, 1831
BmrFI CCNGG 5 cut(s) 532, 1247, 1284, 1415, 1818
BmsI GCATC 4 cut(s) 183, 280, 310, 1706
BpiI GAAGAC 1 cut(s) 114
BpuEI CTTGAG 4 cut(s) 371, 1214, 1505, 1651
BpuMI CCSGG 1 cut(s) 532
Bsa29I ATCGAT 1 cut(s) 1760
BsaJI CCNNGG 5 cut(s) 1413, 1414, 1783, 1816, 1922
BsaWI WCCGGW 1 cut(s) 308
BsaXI ACNNNNNCTCC 4 cut(s) 672, 702, 1592, 1622
Bsc4I CCNNNNNNNGG 1 cut(s) 224
Bse118I RCCGGY 2 cut(s) 1769, 1995
Bse1I ACTGG 5 cut(s) 143, 898, 951, 1242, 1276
Bse3DI GCAATG 1 cut(s) 1059
BseBI CCWGG 4 cut(s) 1247, 1284, 1415, 1818
BseCI ATCGAT 1 cut(s) 1760
BseDI CCNNGG 5 cut(s) 1413, 1414, 1783, 1816, 1922
BseGI GGATG 6 cut(s) 7, 33, 201, 218, 325, 1493
BseLI CCNNNNNNNGG 1 cut(s) 224
BseMI GCAATG 1 cut(s) 1059
BseMII CTCAG 5 cut(s) 131, 396, 655, 972, 1872
BseNI ACTGG 5 cut(s) 143, 898, 951, 1242, 1276
BseRI GAGGAG 1 cut(s) 1082
BseXI GCAGC 3 cut(s) 711, 741, 1789
BseYI CCCAGC 2 cut(s) 323, 1693
BsgI GTGCAG 2 cut(s) 531, 816
Bsh1236I CGCG 1 cut(s) 1452
BshFI GGCC 6 cut(s) 228, 338, 387, 606, 1563, 1980
BshNI GGYRCC 1 cut(s) 1793
BshVI ATCGAT 1 cut(s) 1760
BsiHKAI GWGCWC 1 cut(s) 720
BsiSI CCGG 7 cut(s) 309, 531, 603, 1127, 1611, 1770, 1996
BslI CCNNNNNNNGG 1 cut(s) 224
BsmAI GTCTC 1 cut(s) 1646
BsnI GGCC 6 cut(s) 228, 338, 387, 606, 1563, 1980
Bsp1286I GDGCHC 2 cut(s) 330, 720
Bsp143I GATC 9 cut(s) 76, 184, 198, 354, 958, 1218, 1588, 1757, 2041
Bsp19I CCATGG 1 cut(s) 1922
BspACI CCGC 5 cut(s) 752, 1686, 1800, 1835, 1851
BspANI GGCC 6 cut(s) 228, 338, 387, 606, 1563, 1980
BspCNI CTCAG 5 cut(s) 130, 395, 654, 973, 1873
BspDI ATCGAT 1 cut(s) 1760
BspFNI CGCG 1 cut(s) 1452
BspLI GGNNCC 4 cut(s) 536, 607, 1795, 1831
BspMI ACCTGC 1 cut(s) 1219
BspPI GGATC 5 cut(s) 206, 349, 1226, 1596, 1765
BspT107I GGYRCC 1 cut(s) 1793
BsrDI GCAATG 1 cut(s) 1059
BsrFI RCCGGY 2 cut(s) 1769, 1995
BsrI ACTGG 5 cut(s) 143, 898, 951, 1242, 1276
BssAI RCCGGY 2 cut(s) 1769, 1995
BssECI CCNNGG 5 cut(s) 1413, 1414, 1783, 1816, 1922
BssMI GATC 9 cut(s) 76, 184, 198, 354, 958, 1218, 1588, 1757, 2041
BssT1I CCWWGG 2 cut(s) 1783, 1922
Bst2UI CCWGG 4 cut(s) 1247, 1284, 1415, 1818
Bst4CI ACNGT 4 cut(s) 812, 1482, 1532, 1704
Bst6I CTCTTC 1 cut(s) 106
BstC8I GCNNGC 5 cut(s) 69, 73, 514, 1502, 1775
BstDEI CTNAG 9 cut(s) 117, 382, 641, 860, 981, 1082, 1535, 1592, 1881
BstDSI CCRYGG 1 cut(s) 1922
BstF5I GGATG 6 cut(s) 7, 33, 201, 218, 325, 1493
BstFNI CGCG 1 cut(s) 1452
BstKTI GATC 9 cut(s) 79, 187, 201, 357, 961, 1221, 1591, 1760, 2044
BstMAI GTCTC 1 cut(s) 1646
BstMBI GATC 9 cut(s) 76, 184, 198, 354, 958, 1218, 1588, 1757, 2041
BstMWI GCNNNNNNNGC 2 cut(s) 277, 724
BstNI CCWGG 4 cut(s) 1247, 1284, 1415, 1818
BstNSI RCATGY 3 cut(s) 71, 75, 1504
BstSCI CCNGG 5 cut(s) 530, 1245, 1282, 1413, 1816
BstUI CGCG 1 cut(s) 1452
BstV1I GCAGC 3 cut(s) 711, 741, 1789
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 3 cut(s) 354, 1218, 1588
BstXI CCANNNNNNTGG 1 cut(s) 138
BstYI RGATCY 3 cut(s) 354, 1218, 1588
Bsu15I ATCGAT 1 cut(s) 1760
BsuI GTATCC 1 cut(s) 1500
BsuRI GGCC 6 cut(s) 228, 338, 387, 606, 1563, 1980
BsuTUI ATCGAT 1 cut(s) 1760
BtgI CCRYGG 1 cut(s) 1922
BtgZI GCGATG 2 cut(s) 237, 1467
BtsCI GGATG 6 cut(s) 7, 33, 201, 218, 325, 1493
BtsIMutI CAGTG 3 cut(s) 891, 1269, 1700
BveI ACCTGC 1 cut(s) 1219
Cac8I GCNNGC 5 cut(s) 69, 73, 514, 1502, 1775
Cfr10I RCCGGY 2 cut(s) 1769, 1995
Cfr13I GGNCC 5 cut(s) 311, 605, 652, 749, 1979
ClaI ATCGAT 1 cut(s) 1760
CseI GACGC 2 cut(s) 277, 1585
CsiI ACCWGGT 1 cut(s) 1282
Csp6I GTAC 4 cut(s) 1088, 1208, 1483, 1741
CspCI CAANNNNNGTGG 2 cut(s) 1786, 1821
CviQI GTAC 4 cut(s) 1088, 1208, 1483, 1741
DdeI CTNAG 9 cut(s) 117, 382, 641, 860, 981, 1082, 1535, 1592, 1881
DpnI GATC 9 cut(s) 78, 186, 200, 356, 960, 1220, 1590, 1759, 2043
DpnII GATC 9 cut(s) 76, 184, 198, 354, 958, 1218, 1588, 1757, 2041
DraIII CACNNNGTG 1 cut(s) 2050
EaeI YGGCCR 1 cut(s) 1561
Eam1104I CTCTTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 106
EciI GGCGGA 1 cut(s) 1701
Ecl136II GAGCTC 1 cut(s) 718
Eco130I CCWWGG 2 cut(s) 1783, 1922
Eco147I AGGCCT 1 cut(s) 228
Eco24I GRGCYC 2 cut(s) 330, 720
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 3 cut(s) 311, 652, 749
Eco53kI GAGCTC 1 cut(s) 718
Eco57I CTGAAG 2 cut(s) 132, 1085
EcoICRI GAGCTC 1 cut(s) 718
EcoRII CCWGG 4 cut(s) 1245, 1282, 1413, 1816
EcoRV GATATC 1 cut(s) 550
EcoT14I CCWWGG 2 cut(s) 1783, 1922
EcoT22I ATGCAT 2 cut(s) 73, 2014
EcoT38I GRGCYC 2 cut(s) 330, 720
ErhI CCWWGG 2 cut(s) 1783, 1922
FauI CCCGC 1 cut(s) 1842
FbaI TGATCA 1 cut(s) 184
Fnu4HI GCNGC 3 cut(s) 725, 755, 1778
FokI GGATG 5 cut(s) 20, 188, 205, 332, 1480
FriOI GRGCYC 2 cut(s) 330, 720
Fsp4HI GCNGC 3 cut(s) 725, 755, 1778
FspBI CTAG 5 cut(s) 80, 479, 543, 743, 1751
GluI GCNGC 3 cut(s) 725, 755, 1778
GsaI CCCAGC 2 cut(s) 327, 1697
HaeIII GGCC 6 cut(s) 228, 338, 387, 606, 1563, 1980
HapII CCGG 7 cut(s) 309, 531, 603, 1127, 1611, 1770, 1996
HgaI GACGC 2 cut(s) 277, 1585
HincII GTYRAC 1 cut(s) 1600
HindII GTYRAC 1 cut(s) 1600
HinfI GANTC 9 cut(s) 343, 429, 466, 645, 985, 1032, 1266, 1297, 1689
HpaII CCGG 7 cut(s) 309, 531, 603, 1127, 1611, 1770, 1996
HphI GGTGA 5 cut(s) 626, 682, 1027, 1127, 1358
Hpy166II GTNNAC 3 cut(s) 866, 891, 1600
Hpy188I TCNGA 8 cut(s) 198, 206, 445, 476, 644, 906, 1024, 1356
Hpy8I GTNNAC 3 cut(s) 866, 891, 1600
HpyAV CCTTC 9 cut(s) 38, 164, 386, 548, 740, 959, 1018, 1351, 1748
HpyCH4III ACNGT 4 cut(s) 812, 1482, 1532, 1704
HpyCH4IV ACGT 3 cut(s) 88, 887, 1041
HpyF10VI GCNNNNNNNGC 2 cut(s) 277, 724
HpyF3I CTNAG 9 cut(s) 117, 382, 641, 860, 981, 1082, 1535, 1592, 1881
HpySE526I ACGT 3 cut(s) 88, 887, 1041
Ksp22I TGATCA 1 cut(s) 184
Kzo9I GATC 9 cut(s) 76, 184, 198, 354, 958, 1218, 1588, 1757, 2041
LmnI GCTCC 4 cut(s) 1360, 1402, 1785, 1835
Lsp1109I GCAGC 3 cut(s) 711, 741, 1789
LweI GCATC 4 cut(s) 183, 280, 310, 1706
MabI ACCWGGT 1 cut(s) 1282
MaeI CTAG 5 cut(s) 80, 479, 543, 743, 1751
MaeII ACGT 3 cut(s) 88, 887, 1041
MaeIII GTNAC 4 cut(s) 89, 1155, 1190, 1811
MalI GATC 9 cut(s) 78, 186, 200, 356, 960, 1220, 1590, 1759, 2043
MboI GATC 9 cut(s) 76, 184, 198, 354, 958, 1218, 1588, 1757, 2041
MfeI CAATTG 1 cut(s) 1565
MflI RGATCY 3 cut(s) 354, 1218, 1588
MhlI GDGCHC 2 cut(s) 330, 720
MlsI TGGCCA 1 cut(s) 1563
MluNI TGGCCA 1 cut(s) 1563
MlyI GAGTC 2 cut(s) 438, 1260
MmeI TCCRAC 2 cut(s) 176, 468
Mox20I TGGCCA 1 cut(s) 1563
Mph1103I ATGCAT 2 cut(s) 73, 2014
MroXI GAANNNNTTC 4 cut(s) 487, 504, 621, 1070
MscI TGGCCA 1 cut(s) 1563
Msp20I TGGCCA 1 cut(s) 1563
MspA1I CMGCKG 1 cut(s) 754
MspI CCGG 7 cut(s) 309, 531, 603, 1127, 1611, 1770, 1996
MspR9I CCNGG 5 cut(s) 532, 1247, 1284, 1415, 1818
MunI CAATTG 1 cut(s) 1565
MvaI CCWGG 4 cut(s) 1247, 1284, 1415, 1818
MvnI CGCG 1 cut(s) 1452
MwoI GCNNNNNNNGC 2 cut(s) 277, 724
NciI CCSGG 1 cut(s) 532
NcoI CCATGG 1 cut(s) 1922
NdeII GATC 9 cut(s) 76, 184, 198, 354, 958, 1218, 1588, 1757, 2041
NlaIV GGNNCC 4 cut(s) 536, 607, 1795, 1831
NmuCI GTSAC 1 cut(s) 1190
NsiI ATGCAT 2 cut(s) 73, 2014
NspI RCATGY 3 cut(s) 71, 75, 1504
PaeI GCATGC 3 cut(s) 71, 75, 1504
PasI CCCWGGG 1 cut(s) 1414
PceI AGGCCT 1 cut(s) 228
PcsI WCGNNNNNNNCGW 1 cut(s) 202
PdmI GAANNNNTTC 4 cut(s) 487, 504, 621, 1070
PfeI GAWTC 7 cut(s) 343, 466, 645, 985, 1032, 1297, 1689
PfoI TCCNGGA 1 cut(s) 1245
PkrI GCNGC 3 cut(s) 726, 756, 1779
PleI GAGTC 2 cut(s) 437, 1260
PpsI GAGTC 2 cut(s) 437, 1260
Psp124BI GAGCTC 1 cut(s) 720
Psp1406I AACGTT 1 cut(s) 1041
Psp6I CCWGG 4 cut(s) 1245, 1282, 1413, 1816
PspFI CCCAGC 2 cut(s) 323, 1693
PspGI CCWGG 4 cut(s) 1245, 1282, 1413, 1816
PspN4I GGNNCC 4 cut(s) 536, 607, 1795, 1831
PspPI GGNCC 5 cut(s) 311, 605, 652, 749, 1979
PsuI RGATCY 3 cut(s) 354, 1218, 1588
RsaI GTAC 4 cut(s) 1089, 1209, 1484, 1742
RsaNI GTAC 4 cut(s) 1088, 1208, 1483, 1741
SacI GAGCTC 1 cut(s) 720
SatI GCNGC 3 cut(s) 725, 755, 1778
Sau3AI GATC 9 cut(s) 76, 184, 198, 354, 958, 1218, 1588, 1757, 2041
Sau96I GGNCC 5 cut(s) 311, 605, 652, 749, 1979
SchI GAGTC 2 cut(s) 438, 1260
ScrFI CCNGG 5 cut(s) 532, 1247, 1284, 1415, 1818
SduI GDGCHC 2 cut(s) 330, 720
SexAI ACCWGGT 1 cut(s) 1282
SfaNI GCATC 4 cut(s) 183, 280, 310, 1706
SinI GGWCC 3 cut(s) 311, 652, 749
SmlI CTYRAG 4 cut(s) 350, 1229, 1520, 1666
SmoI CTYRAG 4 cut(s) 350, 1229, 1520, 1666
SphI GCATGC 3 cut(s) 71, 75, 1504
SseBI AGGCCT 1 cut(s) 228
SsiI CCGC 5 cut(s) 752, 1686, 1800, 1835, 1851
SspI AATATT 1 cut(s) 1618
SspMI CTAG 5 cut(s) 80, 479, 543, 743, 1751
SstI GAGCTC 1 cut(s) 720
StuI AGGCCT 1 cut(s) 228
StyD4I CCNGG 5 cut(s) 530, 1245, 1282, 1413, 1816
StyI CCWWGG 2 cut(s) 1783, 1922
TaaI ACNGT 4 cut(s) 812, 1482, 1532, 1704
TaiI ACGT 3 cut(s) 91, 890, 1044
TaqI TCGA 7 cut(s) 427, 464, 845, 870, 943, 1223, 1760
TatI WGTACW 1 cut(s) 1482
TfiI GAWTC 7 cut(s) 343, 466, 645, 985, 1032, 1297, 1689
TscAI CASTG 3 cut(s) 898, 1276, 1707
TseFI GTSAC 1 cut(s) 1190
TseI GCWGC 3 cut(s) 724, 754, 1777
Tsp45I GTSAC 1 cut(s) 1190
TspDTI ATGAA 9 cut(s) 335, 570, 981, 1070, 1452, 1716, 1874, 1929, 1942
TspRI CASTG 3 cut(s) 898, 1276, 1707
VpaK11BI GGWCC 3 cut(s) 311, 652, 749
XapI RAATTY 3 cut(s) 576, 1349, 1917
XbaI TCTAGA 2 cut(s) 742, 1750
XceI RCATGY 3 cut(s) 71, 75, 1504
XmnI GAANNNNTTC 4 cut(s) 487, 504, 621, 1070
XspI CTAG 5 cut(s) 80, 479, 543, 743, 1751
Zsp2I ATGCAT 2 cut(s) 73, 2014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.