F-box kelch-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_8 | PF13855 | 224 - 283 | 2.1e-07 | Leucine rich repeat |
| LRR_14 | PF23598 | 416 - 499 | 4.9e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 425 - 484 | 8.8e-11 | Leucine rich repeat |
| LRR_4 | PF12799 | 448 - 485 | 2.7e-06 | Leucine Rich repeats (2 copies) |
| LRR_14 | PF23598 | 547 - 613 | 8.2e-08 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 595 |
| AccB1I | GGYRCC | 1 cut(s) | 1928 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1684 |
| AccII | CGCG | 1 cut(s) | 2205 |
| AciI | CCGC | 7 cut(s) | 96, 982, 1907, 2171, 2203, 2264, 2319 |
| AcoI | YGGCCR | 1 cut(s) | 1660 |
| AcuI | CTGAAG | 1 cut(s) | 2598 |
| AfaI | GTAC | 5 cut(s) | 1586, 1841, 2243, 2333, 2986 |
| AfeI | AGCGCT | 1 cut(s) | 2292 |
| AflIII | ACRYGT | 3 cut(s) | 125, 901, 3035 |
| AgeI | ACCGGT | 1 cut(s) | 2451 |
| AjnI | CCWGG | 3 cut(s) | 2026, 2272, 2853 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2203, 2235 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2397, 2429 |
| Alw21I | GWGCWC | 5 cut(s) | 789, 1481, 1988, 2480, 3001 |
| Alw26I | GTCTC | 4 cut(s) | 1193, 1840, 2365, 2932 |
| Alw44I | GTGCAC | 1 cut(s) | 1477 |
| Aor51HI | AGCGCT | 1 cut(s) | 2292 |
| AoxI | GGCC | 4 cut(s) | 1562, 1660, 1856, 2953 |
| ApaLI | GTGCAC | 1 cut(s) | 1477 |
| ApeKI | GCWGC | 5 cut(s) | 1511, 2254, 2288, 2774, 2777 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2924, 2956 |
| AsiGI | ACCGGT | 1 cut(s) | 2451 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2396 |
| AspA2I | CCTAGG | 1 cut(s) | 1559 |
| AspLEI | GCGC | 2 cut(s) | 2293, 2628 |
| AspS9I | GGNCC | 4 cut(s) | 488, 1556, 1856, 2002 |
| AsuC2I | CCSGG | 1 cut(s) | 648 |
| AsuHPI | GGTGA | 6 cut(s) | 139, 223, 730, 938, 1235, 2288 |
| AvaII | GGWCC | 3 cut(s) | 488, 1556, 2002 |
| AvrII | CCTAGG | 1 cut(s) | 1559 |
| BaeGI | GKGCMC | 2 cut(s) | 1481, 1933 |
| BalI | TGGCCA | 1 cut(s) | 1662 |
| BanI | GGYRCC | 1 cut(s) | 1928 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 559, 591, 1306, 1338, 1845, 1877 |
| BauI | CACGAG | 2 cut(s) | 1024, 2760 |
| BbsI | GAAGAC | 3 cut(s) | 19, 63, 1802 |
| Bbv12I | GWGCWC | 5 cut(s) | 789, 1481, 1988, 2480, 3001 |
| BbvI | GCAGC | 5 cut(s) | 1523, 2266, 2300, 2761, 2764 |
| BceAI | ACGGC | 2 cut(s) | 2390, 2658 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1880, 1914, 2940, 2974 |
| BciT130I | CCWGG | 3 cut(s) | 2028, 2274, 2855 |
| BclI | TGATCA | 1 cut(s) | 2190 |
| BcnI | CCSGG | 1 cut(s) | 648 |
| BcoDI | GTCTC | 4 cut(s) | 1193, 1840, 2365, 2932 |
| BfaI | CTAG | 9 cut(s) | 272, 317, 396, 618, 1212, 1560, 2099, 2880, 2924 |
| BfmI | CTRYAG | 3 cut(s) | 602, 1509, 2286 |
| BfoI | RGCGCY | 1 cut(s) | 2294 |
| BfuAI | ACCTGC | 1 cut(s) | 595 |
| BglII | AGATCT | 1 cut(s) | 1353 |
| BisI | GCNGC | 5 cut(s) | 1512, 2255, 2289, 2775, 2778 |
| BlnI | CCTAGG | 1 cut(s) | 1559 |
| BlsI | GCNGC | 5 cut(s) | 1513, 2256, 2290, 2776, 2779 |
| Bme1390I | CCNGG | 4 cut(s) | 648, 2028, 2274, 2855 |
| Bme18I | GGWCC | 3 cut(s) | 488, 1556, 2002 |
| BmgT120I | GGNCC | 4 cut(s) | 488, 1556, 1856, 2002 |
| BmiI | GGNNCC | 4 cut(s) | 910, 1930, 2490, 2594 |
| BmrFI | CCNGG | 4 cut(s) | 648, 2028, 2274, 2855 |
| BmsI | GCATC | 9 cut(s) | 129, 1026, 1164, 1217, 1425, 1558, 1882, 1960, 2838 |
| BpiI | GAAGAC | 3 cut(s) | 19, 63, 1802 |
| BpmI | CTGGAG | 1 cut(s) | 1476 |
| BpuEI | CTTGAG | 1 cut(s) | 1500 |
| BpuMI | CCSGG | 1 cut(s) | 648 |
| BsaAI | YACGTR | 2 cut(s) | 902, 3036 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1365 |
| BsaJI | CCNNGG | 4 cut(s) | 1203, 1559, 2027, 2314 |
| BsaWI | WCCGGW | 3 cut(s) | 1709, 2074, 2451 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1691, 1721 |
| Bse118I | RCCGGY | 1 cut(s) | 2451 |
| Bse1I | ACTGG | 5 cut(s) | 369, 669, 1387, 2969, 3019 |
| Bse3DI | GCAATG | 2 cut(s) | 720, 3049 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1365 |
| BseBI | CCWGG | 3 cut(s) | 2028, 2274, 2855 |
| BseDI | CCNNGG | 4 cut(s) | 1203, 1559, 2027, 2314 |
| BseGI | GGATG | 4 cut(s) | 365, 387, 497, 2616 |
| BseJI | GATNNNNATC | 1 cut(s) | 1365 |
| BseMI | GCAATG | 2 cut(s) | 720, 3049 |
| BseMII | CTCAG | 4 cut(s) | 69, 1610, 1644, 1889 |
| BseNI | ACTGG | 5 cut(s) | 369, 669, 1387, 2969, 3019 |
| BseSI | GKGCMC | 2 cut(s) | 1481, 1933 |
| BseXI | GCAGC | 5 cut(s) | 1523, 2266, 2300, 2761, 2764 |
| BseYI | CCCAGC | 1 cut(s) | 1402 |
| BsgI | GTGCAG | 2 cut(s) | 435, 2763 |
| Bsh1236I | CGCG | 1 cut(s) | 2205 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2960 |
| BshFI | GGCC | 4 cut(s) | 1564, 1662, 1858, 2955 |
| BshNI | GGYRCC | 1 cut(s) | 1928 |
| BshTI | ACCGGT | 1 cut(s) | 2451 |
| BsiEI | CGRYCG | 1 cut(s) | 2960 |
| BsiHKAI | GWGCWC | 5 cut(s) | 789, 1481, 1988, 2480, 3001 |
| BsiSI | CCGG | 4 cut(s) | 647, 1710, 2075, 2452 |
| BslFI | GGGAC | 4 cut(s) | 232, 1420, 2054, 2903 |
| BsmAI | GTCTC | 4 cut(s) | 1193, 1840, 2365, 2932 |
| BsmBI | CGTCTC | 3 cut(s) | 1193, 1840, 2365 |
| BsmFI | GGGAC | 4 cut(s) | 232, 1420, 2054, 2903 |
| BsnI | GGCC | 4 cut(s) | 1564, 1662, 1858, 2955 |
| Bsp1286I | GDGCHC | 6 cut(s) | 789, 1481, 1933, 1988, 2480, 3001 |
| Bsp1407I | TGTACA | 1 cut(s) | 2984 |
| BspACI | CCGC | 7 cut(s) | 96, 982, 1907, 2171, 2203, 2264, 2319 |
| BspANI | GGCC | 4 cut(s) | 1564, 1662, 1858, 2955 |
| BspCNI | CTCAG | 4 cut(s) | 70, 1611, 1645, 1888 |
| BspFNI | CGCG | 1 cut(s) | 2205 |
| BspLI | GGNNCC | 4 cut(s) | 910, 1930, 2490, 2594 |
| BspMAI | CTGCAG | 3 cut(s) | 606, 1513, 2290 |
| BspMI | ACCTGC | 1 cut(s) | 595 |
| BspT107I | GGYRCC | 1 cut(s) | 1928 |
| BsrDI | GCAATG | 2 cut(s) | 720, 3049 |
| BsrFI | RCCGGY | 1 cut(s) | 2451 |
| BsrGI | TGTACA | 1 cut(s) | 2984 |
| BsrI | ACTGG | 5 cut(s) | 369, 669, 1387, 2969, 3019 |
| BssAI | RCCGGY | 1 cut(s) | 2451 |
| BssECI | CCNNGG | 4 cut(s) | 1203, 1559, 2027, 2314 |
| BssSI | CACGAG | 2 cut(s) | 1024, 2760 |
| BssT1I | CCWWGG | 3 cut(s) | 1203, 1559, 2314 |
| Bst2BI | CACGAG | 2 cut(s) | 1024, 2760 |
| Bst2UI | CCWGG | 3 cut(s) | 2028, 2274, 2855 |
| Bst4CI | ACNGT | 2 cut(s) | 1584, 2991 |
| Bst6I | CTCTTC | 5 cut(s) | 293, 672, 1416, 2169, 2967 |
| BstAUI | TGTACA | 1 cut(s) | 2984 |
| BstBAI | YACGTR | 2 cut(s) | 902, 3036 |
| BstC8I | GCNNGC | 3 cut(s) | 2226, 2741, 2953 |
| BstDEI | CTNAG | 9 cut(s) | 78, 965, 1307, 1619, 1634, 1653, 1691, 1875, 2150 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 168 |
| BstF5I | GGATG | 4 cut(s) | 365, 387, 497, 2616 |
| BstFNI | CGCG | 1 cut(s) | 2205 |
| BstH2I | RGCGCY | 1 cut(s) | 2294 |
| BstHHI | GCGC | 2 cut(s) | 2293, 2628 |
| BstMAI | GTCTC | 4 cut(s) | 1193, 1840, 2365, 2932 |
| BstMCI | CGRYCG | 1 cut(s) | 2960 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1336, 2254, 2263, 2542, 2771, 2880 |
| BstNI | CCWGG | 3 cut(s) | 2028, 2274, 2855 |
| BstNSI | RCATGY | 2 cut(s) | 129, 2228 |
| BstSCI | CCNGG | 4 cut(s) | 646, 2026, 2272, 2853 |
| BstSFI | CTRYAG | 3 cut(s) | 602, 1509, 2286 |
| BstSLI | GKGCMC | 2 cut(s) | 1481, 1933 |
| BstUI | CGCG | 1 cut(s) | 2205 |
| BstV1I | GCAGC | 5 cut(s) | 1523, 2266, 2300, 2761, 2764 |
| BstV2I | GAAGAC | 3 cut(s) | 19, 63, 1802 |
| BstX2I | RGATCY | 7 cut(s) | 388, 1353, 1360, 1687, 1759, 2350, 2363 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 779, 919, 1454, 1781 |
| BstYI | RGATCY | 7 cut(s) | 388, 1353, 1360, 1687, 1759, 2350, 2363 |
| BsuRI | GGCC | 4 cut(s) | 1564, 1662, 1858, 2955 |
| BtgZI | GCGATG | 1 cut(s) | 2220 |
| BtsCI | GGATG | 4 cut(s) | 365, 387, 497, 2616 |
| BtsIMutI | CAGTG | 3 cut(s) | 1380, 2987, 3012 |
| BveI | ACCTGC | 1 cut(s) | 595 |
| Cac8I | GCNNGC | 3 cut(s) | 2226, 2741, 2953 |
| CfoI | GCGC | 2 cut(s) | 2293, 2628 |
| Cfr10I | RCCGGY | 1 cut(s) | 2451 |
| Cfr13I | GGNCC | 4 cut(s) | 488, 1556, 1856, 2002 |
| Csp6I | GTAC | 5 cut(s) | 1585, 1840, 2242, 2332, 2985 |
| CspAI | ACCGGT | 1 cut(s) | 2451 |
| CviQI | GTAC | 5 cut(s) | 1585, 1840, 2242, 2332, 2985 |
| DdeI | CTNAG | 9 cut(s) | 78, 965, 1307, 1619, 1634, 1653, 1691, 1875, 2150 |
| DraI | TTTAAA | 1 cut(s) | 2646 |
| EaeI | YGGCCR | 1 cut(s) | 1660 |
| Eam1104I | CTCTTC | 5 cut(s) | 293, 672, 1416, 2169, 2967 |
| EarI | CTCTTC | 5 cut(s) | 293, 672, 1416, 2169, 2967 |
| EciI | GGCGGA | 1 cut(s) | 2253 |
| Eco130I | CCWWGG | 3 cut(s) | 1203, 1559, 2314 |
| Eco147I | AGGCCT | 1 cut(s) | 1564 |
| Eco32I | GATATC | 2 cut(s) | 931, 1731 |
| Eco47I | GGWCC | 3 cut(s) | 488, 1556, 2002 |
| Eco47III | AGCGCT | 1 cut(s) | 2292 |
| Eco57I | CTGAAG | 1 cut(s) | 2598 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 168 |
| EcoO109I | RGGNCCY | 1 cut(s) | 488 |
| EcoRI | GAATTC | 2 cut(s) | 697, 2396 |
| EcoRII | CCWGG | 3 cut(s) | 2026, 2272, 2853 |
| EcoRV | GATATC | 2 cut(s) | 931, 1731 |
| EcoT14I | CCWWGG | 3 cut(s) | 1203, 1559, 2314 |
| ErhI | CCWWGG | 3 cut(s) | 1203, 1559, 2314 |
| Esp3I | CGTCTC | 3 cut(s) | 1193, 1840, 2365 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2203, 2235, 2626, 2658 |
| FaqI | GGGAC | 4 cut(s) | 232, 1420, 2054, 2903 |
| FauI | CCCGC | 1 cut(s) | 1900 |
| FauNDI | CATATG | 1 cut(s) | 26 |
| FbaI | TGATCA | 1 cut(s) | 2190 |
| Fnu4HI | GCNGC | 5 cut(s) | 1512, 2255, 2289, 2775, 2778 |
| FokI | GGATG | 4 cut(s) | 352, 394, 484, 2623 |
| Fsp4HI | GCNGC | 5 cut(s) | 1512, 2255, 2289, 2775, 2778 |
| FspBI | CTAG | 9 cut(s) | 272, 317, 396, 618, 1212, 1560, 2099, 2880, 2924 |
| GlaI | GCGC | 2 cut(s) | 2292, 2627 |
| GluI | GCNGC | 5 cut(s) | 1512, 2255, 2289, 2775, 2778 |
| GsaI | CCCAGC | 1 cut(s) | 1406 |
| GsuI | CTGGAG | 1 cut(s) | 1476 |
| HaeII | RGCGCY | 1 cut(s) | 2294 |
| HaeIII | GGCC | 4 cut(s) | 1564, 1662, 1858, 2955 |
| HapII | CCGG | 4 cut(s) | 647, 1710, 2075, 2452 |
| HhaI | GCGC | 2 cut(s) | 2293, 2628 |
| Hin6I | GCGC | 2 cut(s) | 2291, 2626 |
| HinP1I | GCGC | 2 cut(s) | 2291, 2626 |
| HindIII | AAGCTT | 3 cut(s) | 441, 2741, 2801 |
| HpaII | CCGG | 4 cut(s) | 647, 1710, 2075, 2452 |
| HphI | GGTGA | 6 cut(s) | 139, 223, 730, 938, 1235, 2288 |
| Hpy166II | GTNNAC | 4 cut(s) | 971, 1479, 2509, 2987 |
| Hpy188I | TCNGA | 9 cut(s) | 381, 696, 873, 1365, 1917, 1953, 2066, 2470, 2918 |
| Hpy8I | GTNNAC | 4 cut(s) | 971, 1479, 2509, 2987 |
| HpyCH4III | ACNGT | 2 cut(s) | 1584, 2991 |
| HpyCH4IV | ACGT | 4 cut(s) | 901, 1186, 1833, 3035 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1336, 2254, 2263, 2542, 2771, 2880 |
| HpyF3I | CTNAG | 9 cut(s) | 78, 965, 1307, 1619, 1634, 1653, 1691, 1875, 2150 |
| HpySE526I | ACGT | 4 cut(s) | 901, 1186, 1833, 3035 |
| HspAI | GCGC | 2 cut(s) | 2291, 2626 |
| Ksp22I | TGATCA | 1 cut(s) | 2190 |
| LmnI | GCTCC | 6 cut(s) | 710, 792, 1884, 2080, 2457, 3004 |
| Lsp1109I | GCAGC | 5 cut(s) | 1523, 2266, 2300, 2761, 2764 |
| LweI | GCATC | 9 cut(s) | 129, 1026, 1164, 1217, 1425, 1558, 1882, 1960, 2838 |
| MaeI | CTAG | 9 cut(s) | 272, 317, 396, 618, 1212, 1560, 2099, 2880, 2924 |
| MaeII | ACGT | 4 cut(s) | 901, 1186, 1833, 3035 |
| MfeI | CAATTG | 4 cut(s) | 109, 773, 1664, 2049 |
| MflI | RGATCY | 7 cut(s) | 388, 1353, 1360, 1687, 1759, 2350, 2363 |
| MhlI | GDGCHC | 6 cut(s) | 789, 1481, 1933, 1988, 2480, 3001 |
| MlsI | TGGCCA | 1 cut(s) | 1662 |
| MluNI | TGGCCA | 1 cut(s) | 1662 |
| MlyI | GAGTC | 4 cut(s) | 1402, 1630, 2076, 2984 |
| MmeI | TCCRAC | 4 cut(s) | 122, 460, 1109, 1737 |
| Mox20I | TGGCCA | 1 cut(s) | 1662 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2396 |
| MscI | TGGCCA | 1 cut(s) | 1662 |
| MseI | TTAA | 7 cut(s) | 177, 660, 1260, 1430, 2060, 2336, 2645 |
| MslI | CAYNNNNRTG | 3 cut(s) | 408, 1751, 2483 |
| Msp20I | TGGCCA | 1 cut(s) | 1662 |
| MspA1I | CMGCKG | 1 cut(s) | 98 |
| MspI | CCGG | 4 cut(s) | 647, 1710, 2075, 2452 |
| MspR9I | CCNGG | 4 cut(s) | 648, 2028, 2274, 2855 |
| MunI | CAATTG | 4 cut(s) | 109, 773, 1664, 2049 |
| MvaI | CCWGG | 3 cut(s) | 2028, 2274, 2855 |
| MvnI | CGCG | 1 cut(s) | 2205 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1336, 2254, 2263, 2542, 2771, 2880 |
| NciI | CCSGG | 1 cut(s) | 648 |
| NdeI | CATATG | 1 cut(s) | 26 |
| NlaIV | GGNNCC | 4 cut(s) | 910, 1930, 2490, 2594 |
| NmeAIII | GCCGAG | 1 cut(s) | 1035 |
| NmuCI | GTSAC | 5 cut(s) | 620, 1150, 2198, 2707, 2976 |
| NspI | RCATGY | 2 cut(s) | 129, 2228 |
| PaeI | GCATGC | 1 cut(s) | 2228 |
| PceI | AGGCCT | 1 cut(s) | 1564 |
| PciI | ACATGT | 1 cut(s) | 125 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2396 |
| PfeI | GAWTC | 8 cut(s) | 241, 1366, 1377, 1912, 2008, 2214, 2406, 2714 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1684 |
| PfoI | TCCNGGA | 1 cut(s) | 646 |
| PinAI | ACCGGT | 1 cut(s) | 2451 |
| PkrI | GCNGC | 5 cut(s) | 1513, 2256, 2290, 2776, 2779 |
| Ple19I | CGATCG | 1 cut(s) | 2960 |
| PleI | GAGTC | 4 cut(s) | 1402, 1629, 2075, 2983 |
| PpsI | GAGTC | 4 cut(s) | 1402, 1629, 2075, 2983 |
| Ppu21I | YACGTR | 2 cut(s) | 902, 3036 |
| PpuMI | RGGWCCY | 1 cut(s) | 488 |
| PscI | ACATGT | 1 cut(s) | 125 |
| Psp5II | RGGWCCY | 1 cut(s) | 488 |
| Psp6I | CCWGG | 3 cut(s) | 2026, 2272, 2853 |
| PspFI | CCCAGC | 1 cut(s) | 1402 |
| PspGI | CCWGG | 3 cut(s) | 2026, 2272, 2853 |
| PspN4I | GGNNCC | 4 cut(s) | 910, 1930, 2490, 2594 |
| PspPI | GGNCC | 4 cut(s) | 488, 1556, 1856, 2002 |
| PspPPI | RGGWCCY | 1 cut(s) | 488 |
| PstI | CTGCAG | 3 cut(s) | 606, 1513, 2290 |
| PsuI | RGATCY | 7 cut(s) | 388, 1353, 1360, 1687, 1759, 2350, 2363 |
| PvuI | CGATCG | 1 cut(s) | 2960 |
| RsaI | GTAC | 5 cut(s) | 1586, 1841, 2243, 2333, 2986 |
| RsaNI | GTAC | 5 cut(s) | 1585, 1840, 2242, 2332, 2985 |
| RseI | CAYNNNNRTG | 3 cut(s) | 408, 1751, 2483 |
| SaqAI | TTAA | 7 cut(s) | 177, 660, 1260, 1430, 2060, 2336, 2645 |
| SatI | GCNGC | 5 cut(s) | 1512, 2255, 2289, 2775, 2778 |
| Sau96I | GGNCC | 4 cut(s) | 488, 1556, 1856, 2002 |
| SchI | GAGTC | 4 cut(s) | 1402, 1630, 2076, 2984 |
| ScrFI | CCNGG | 4 cut(s) | 648, 2028, 2274, 2855 |
| SduI | GDGCHC | 6 cut(s) | 789, 1481, 1933, 1988, 2480, 3001 |
| SfaNI | GCATC | 9 cut(s) | 129, 1026, 1164, 1217, 1425, 1558, 1882, 1960, 2838 |
| SfcI | CTRYAG | 3 cut(s) | 602, 1509, 2286 |
| SinI | GGWCC | 3 cut(s) | 488, 1556, 2002 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 408, 1751, 2483 |
| SmlI | CTYRAG | 1 cut(s) | 1515 |
| SmoI | CTYRAG | 1 cut(s) | 1515 |
| SphI | GCATGC | 1 cut(s) | 2228 |
| SseBI | AGGCCT | 1 cut(s) | 1564 |
| SsiI | CCGC | 7 cut(s) | 96, 982, 1907, 2171, 2203, 2264, 2319 |
| SspI | AATATT | 2 cut(s) | 2282, 2896 |
| SspMI | CTAG | 9 cut(s) | 272, 317, 396, 618, 1212, 1560, 2099, 2880, 2924 |
| StuI | AGGCCT | 1 cut(s) | 1564 |
| StyD4I | CCNGG | 4 cut(s) | 646, 2026, 2272, 2853 |
| StyI | CCWWGG | 3 cut(s) | 1203, 1559, 2314 |
| TaaI | ACNGT | 2 cut(s) | 1584, 2991 |
| TaiI | ACGT | 4 cut(s) | 904, 1189, 1836, 3038 |
| TaqI | TCGA | 8 cut(s) | 309, 1048, 1279, 1334, 1766, 1890, 2930, 2960 |
| TaqII | GACCGA | 1 cut(s) | 1544 |
| TatI | WGTACW | 3 cut(s) | 1584, 2331, 2984 |
| TfiI | GAWTC | 8 cut(s) | 241, 1366, 1377, 1912, 2008, 2214, 2406, 2714 |
| Tru1I | TTAA | 7 cut(s) | 177, 660, 1260, 1430, 2060, 2336, 2645 |
| Tru9I | TTAA | 7 cut(s) | 177, 660, 1260, 1430, 2060, 2336, 2645 |
| TscAI | CASTG | 3 cut(s) | 1387, 2994, 3019 |
| TseFI | GTSAC | 5 cut(s) | 620, 1150, 2198, 2707, 2976 |
| TseI | GCWGC | 5 cut(s) | 1511, 2254, 2288, 2774, 2777 |
| Tsp45I | GTSAC | 5 cut(s) | 620, 1150, 2198, 2707, 2976 |
| TspGWI | ACGGA | 2 cut(s) | 602, 2401 |
| TspRI | CASTG | 3 cut(s) | 1387, 2994, 3019 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1684 |
| VneI | GTGCAC | 1 cut(s) | 1477 |
| VpaK11BI | GGWCC | 3 cut(s) | 488, 1556, 2002 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 168 |
| XbaI | TCTAGA | 1 cut(s) | 271 |
| XceI | RCATGY | 2 cut(s) | 129, 2228 |
| XmaJI | CCTAGG | 1 cut(s) | 1559 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2396 |
| XspI | CTAG | 9 cut(s) | 272, 317, 396, 618, 1212, 1560, 2099, 2880, 2924 |