Rorug05G0479500

Protein of unknown function, DUF538

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
66023224 .. 66089619
66396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0479500.1

Sequence Viewer

Length: 1311 bp
ATGGATTCCCGGCACGCATCTCTAGGCCGCCGAACGTTGGAAGAAATTCGTCAAAAGCGAGCTGCAGAAAGATTGAGCAAAACTTCTTCGGGGCCCGATCTCAGCCAGATCCCACCTATCGATAATGGAGGAATGAGAAAATCGGAGAGCGCAAATCGACTCTCTGAGAGCGATGTTAGTACTTTAGTTTCTCAGATAAGAGACTTGGATAGGAAGAATGCAGAACTGGAAGAACAGAACAAAAATTTGGCTTCCATGCTTGAAACAAAGGAATCCAGGAGTACTGTGCTGCAGAAACGTTTGAATGATCTGGAGCAAAATACTGTGCCGTCTTTGAGGAAAGCTCTCAAGGATGTCGCAATGGAGAAAGATGCAGCAGTTGTTGCACGGGAGGATCTCTCTGCCCAGCTGCGTATGCTCAAGAAACGTCTAAAGGACGCAGAAGAAGAACAGTATCGAGCTGAGGAAGATGCAGCATCCCTGAGAGCAGAACTCAATATGATACAGCAACAAACAATGAGTGGCTCACATGGTGCACTAAACTCAATTGCTAATCCACCTGATCAGATAAAAACATTAGATATTGAGTTGGCTAACATAAAGTCTGAGTTACAGCGAGAGTCAATGTTTAGACAGCAAGAACGACAGCAATTAGCAGAGGAGCAGGCTCGAGCATCCATCCTTACATCTGAGAAGCAAGAATTGGAAGAAAAACTTGCAGCTTTGTCTAGAAAGTCTTCAGAAGTGTCAGACAAAGTGGCCAGCAAGGGATTTTCAATAGAAGACAAGGAGATACTCGAGAAGCAGATGCATGACATGGCTGTAGTGATTGAAAAATTGGAAAGCAGTAGACAAAAGCTTTTAATGGAGATTGATTCCCAATCTTCGGAGATAGAAAGGCTTTTTGAGGAAAACTCTAATTTATCTAGTTCTCATCAGGAGGCTATGAGCATAGCTTTGCACTGGGAAAATCAGGTGAAAGACTGTCTTAAGCAAAATGAAGAGCTCCGAGGAATCTTAGATAAGTTAAGAACTGACCAGGCCAAGGGGTTGCTCGACTCCCATAGCAATGGCTCTAACAAGACTGGTTTAGCTGAATATACACCTGAAGTTCTCTCTATCAAGGATCAACTTGCAAAAGAACAGAGCAAAGCAGAGGCATTATCAGCTGAGGTATTACAGCTCTCAGCAAGACTCCAACAAACCACTCAAGCATACAATGGGCTTGCACGCCTCTATAAACCGGTGTTGCGAAACATAGAAAGCAGTCTCATTAAGATGAAACAAGATGGCCCTGTGACAGTGCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

436

Amino Acids

49.12

Weight (kDa)

5.61

Isoelectric Point (pI)

64.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 850
AciI CCGC 2 cut(s) 28, 1306
AclI AACGTT 2 cut(s) 35, 298
AclWI GGATC 3 cut(s) 103, 402, 1134
AcoI YGGCCR 1 cut(s) 759
AcsI RAATTY 2 cut(s) 45, 244
AcuI CTGAAG 2 cut(s) 723, 1128
AdeI CACNNNGTG 1 cut(s) 533
AfaI GTAC 2 cut(s) 181, 283
AfiI CCNNNNNNNGG 3 cut(s) 37, 886, 1045
AflII CTTAAG 1 cut(s) 989
AgeI ACCGGT 1 cut(s) 1243
AgsI TTSAA 4 cut(s) 263, 304, 777, 833
AjnI CCWGG 2 cut(s) 275, 1038
AjuI GAANNNNNNNTTGG 4 cut(s) 230, 262, 686, 718
Alw21I GWGCWC 2 cut(s) 538, 1008
Alw26I GTCTC 2 cut(s) 195, 1274
Alw44I GTGCAC 1 cut(s) 534
AlwI GGATC 3 cut(s) 103, 402, 1134
Ama87I CYCGRG 2 cut(s) 669, 797
AoxI GGCC 5 cut(s) 25, 92, 759, 1041, 1291
ApaI GGGCCC 1 cut(s) 96
ApaLI GTGCAC 1 cut(s) 534
ApeKI GCWGC 6 cut(s) 62, 289, 374, 409, 473, 719
ApoI RAATTY 2 cut(s) 45, 244
AsiGI ACCGGT 1 cut(s) 1243
Asp700I GAANNNNTTC 2 cut(s) 45, 736
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 3 cut(s) 92, 93, 1292
AsuC2I CCSGG 1 cut(s) 10
AsuHPI GGTGA 1 cut(s) 988
AvaI CYCGRG 2 cut(s) 669, 797
BaeGI GKGCMC 2 cut(s) 96, 538
BalI TGGCCA 1 cut(s) 761
BanII GRGCYC 2 cut(s) 96, 1008
BbsI GAAGAC 2 cut(s) 729, 789
Bbv12I GWGCWC 2 cut(s) 538, 1008
BbvCI CCTCAGC 2 cut(s) 462, 1170
BbvI GCAGC 6 cut(s) 49, 276, 386, 396, 485, 731
BccI CCATC 2 cut(s) 686, 1283
BceAI ACGGC 1 cut(s) 313
BciT130I CCWGG 2 cut(s) 277, 1040
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 1 cut(s) 10
BcoDI GTCTC 2 cut(s) 195, 1274
BfaI CTAG 3 cut(s) 23, 729, 927
BfmI CTRYAG 3 cut(s) 63, 290, 822
BfrI CTTAAG 1 cut(s) 989
BisI GCNGC 7 cut(s) 28, 63, 290, 375, 410, 474, 720
BlsI GCNGC 7 cut(s) 29, 64, 291, 376, 411, 475, 721
BmcAI AGTACT 2 cut(s) 181, 283
Bme1390I CCNGG 3 cut(s) 10, 277, 1040
BmeT110I CYCGRG 2 cut(s) 669, 797
BmgT120I GGNCC 3 cut(s) 92, 93, 1292
BmiI GGNNCC 2 cut(s) 93, 94
BmrFI CCNGG 3 cut(s) 10, 277, 1040
BmrI ACTGGG 1 cut(s) 973
BmsI GCATC 6 cut(s) 26, 361, 460, 485, 683, 798
BmuI ACTGGG 1 cut(s) 973
BpiI GAAGAC 2 cut(s) 729, 789
BplI GAGNNNNNCTC 8 cut(s) 328, 360, 383, 415, 477, 509, 899, 931
BpmI CTGGAG 1 cut(s) 332
Bpu10I CCTNAGC 2 cut(s) 462, 1170
BpuEI CTTGAG 3 cut(s) 332, 404, 1194
BpuMI CCSGG 1 cut(s) 10
Bsa29I ATCGAT 1 cut(s) 120
BsaJI CCNNGG 2 cut(s) 1009, 1044
BsaWI WCCGGW 1 cut(s) 1243
Bsc4I CCNNNNNNNGG 3 cut(s) 37, 886, 1045
Bse118I RCCGGY 1 cut(s) 1243
Bse1I ACTGG 3 cut(s) 231, 968, 1090
Bse3DI GCAATG 2 cut(s) 366, 1075
BseBI CCWGG 2 cut(s) 277, 1040
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 2 cut(s) 1009, 1044
BseGI GGATG 4 cut(s) 358, 476, 674, 678
BseLI CCNNNNNNNGG 3 cut(s) 37, 886, 1045
BseMI GCAATG 2 cut(s) 366, 1075
BseMII CTCAG 9 cut(s) 115, 156, 206, 453, 473, 597, 681, 1161, 1200
BseNI ACTGG 3 cut(s) 231, 968, 1090
BseRI GAGGAG 1 cut(s) 674
BseSI GKGCMC 2 cut(s) 96, 538
BseXI GCAGC 6 cut(s) 49, 276, 386, 396, 485, 731
BseYI CCCAGC 1 cut(s) 405
BshFI GGCC 5 cut(s) 27, 94, 761, 1043, 1293
BshTI ACCGGT 1 cut(s) 1243
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 2 cut(s) 538, 1008
BsiHKCI CYCGRG 2 cut(s) 669, 797
BsiSI CCGG 2 cut(s) 10, 1244
BslI CCNNNNNNNGG 3 cut(s) 37, 886, 1045
BsmAI GTCTC 2 cut(s) 195, 1274
BsmI GAATGC 1 cut(s) 223
BsnI GGCC 5 cut(s) 27, 94, 761, 1043, 1293
BsoBI CYCGRG 2 cut(s) 669, 797
Bsp120I GGGCCC 1 cut(s) 92
Bsp1286I GDGCHC 3 cut(s) 96, 538, 1008
Bsp143I GATC 6 cut(s) 97, 108, 307, 394, 562, 1126
BspACI CCGC 2 cut(s) 28, 1306
BspANI GGCC 5 cut(s) 27, 94, 761, 1043, 1293
BspCNI CTCAG 9 cut(s) 114, 157, 205, 454, 474, 598, 682, 1162, 1199
BspDI ATCGAT 1 cut(s) 120
BspLI GGNNCC 2 cut(s) 93, 94
BspMAI CTGCAG 2 cut(s) 67, 294
BspPI GGATC 3 cut(s) 103, 402, 1134
BspQI GCTCTTC 1 cut(s) 996
BspTI CTTAAG 1 cut(s) 989
BsrDI GCAATG 2 cut(s) 366, 1075
BsrFI RCCGGY 1 cut(s) 1243
BsrI ACTGG 3 cut(s) 231, 968, 1090
BssAI RCCGGY 1 cut(s) 1243
BssECI CCNNGG 2 cut(s) 1009, 1044
BssMI GATC 6 cut(s) 97, 108, 307, 394, 562, 1126
BssT1I CCWWGG 1 cut(s) 1044
Bst2UI CCWGG 2 cut(s) 277, 1040
Bst4CI ACNGT 5 cut(s) 286, 325, 453, 986, 1303
Bst6I CTCTTC 1 cut(s) 996
BstAFI CTTAAG 1 cut(s) 989
BstAPI GCANNNNNTGC 1 cut(s) 383
BstC8I GCNNGC 6 cut(s) 15, 60, 666, 763, 1227, 1231
BstF5I GGATG 4 cut(s) 358, 476, 674, 678
BstHHI GCGC 1 cut(s) 152
BstKTI GATC 6 cut(s) 100, 111, 310, 397, 565, 1129
BstMAI GTCTC 2 cut(s) 195, 1274
BstMBI GATC 6 cut(s) 97, 108, 307, 394, 562, 1126
BstMWI GCNNNNNNNGC 3 cut(s) 383, 415, 1166
BstNI CCWGG 2 cut(s) 277, 1040
BstSCI CCNGG 3 cut(s) 8, 275, 1038
BstSFI CTRYAG 3 cut(s) 63, 290, 822
BstSLI GKGCMC 2 cut(s) 96, 538
BstV1I GCAGC 6 cut(s) 49, 276, 386, 396, 485, 731
BstV2I GAAGAC 2 cut(s) 729, 789
BstX2I RGATCY 2 cut(s) 108, 394
BstXI CCANNNNNNTGG 1 cut(s) 1070
BstYI RGATCY 2 cut(s) 108, 394
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 5 cut(s) 27, 94, 761, 1043, 1293
BsuTUI ATCGAT 1 cut(s) 120
BtgZI GCGATG 1 cut(s) 186
BtsCI GGATG 4 cut(s) 358, 476, 674, 678
BtsIMutI CAGTG 2 cut(s) 961, 1308
Cac8I GCNNGC 6 cut(s) 15, 60, 666, 763, 1227, 1231
CfoI GCGC 1 cut(s) 152
Cfr10I RCCGGY 1 cut(s) 1243
Cfr13I GGNCC 3 cut(s) 92, 93, 1292
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 1 cut(s) 446
Csp6I GTAC 2 cut(s) 180, 282
CspAI ACCGGT 1 cut(s) 1243
CviAII CATG 4 cut(s) 256, 530, 812, 817
CviQI GTAC 2 cut(s) 180, 282
DpnI GATC 6 cut(s) 99, 110, 309, 396, 564, 1128
DpnII GATC 6 cut(s) 97, 108, 307, 394, 562, 1126
DraIII CACNNNGTG 1 cut(s) 533
EaeI YGGCCR 1 cut(s) 759
Eam1104I CTCTTC 1 cut(s) 996
EarI CTCTTC 1 cut(s) 996
Ecl136II GAGCTC 1 cut(s) 1006
Eco130I CCWWGG 1 cut(s) 1044
Eco24I GRGCYC 2 cut(s) 96, 1008
Eco53kI GAGCTC 1 cut(s) 1006
Eco57I CTGAAG 2 cut(s) 723, 1128
Eco88I CYCGRG 2 cut(s) 669, 797
EcoICRI GAGCTC 1 cut(s) 1006
EcoO109I RGGNCCY 1 cut(s) 92
EcoRII CCWGG 2 cut(s) 275, 1038
EcoT14I CCWWGG 1 cut(s) 1044
EcoT22I ATGCAT 1 cut(s) 813
EcoT38I GRGCYC 2 cut(s) 96, 1008
ErhI CCWWGG 1 cut(s) 1044
FaeI CATG 4 cut(s) 259, 533, 815, 820
FalI AAGNNNNNCTT 4 cut(s) 699, 731, 972, 1004
FatI CATG 4 cut(s) 255, 529, 811, 816
FbaI TGATCA 1 cut(s) 562
FblI GTMKAC 1 cut(s) 850
Fnu4HI GCNGC 7 cut(s) 28, 63, 290, 375, 410, 474, 720
FokI GGATG 4 cut(s) 365, 463, 661, 665
FriOI GRGCYC 2 cut(s) 96, 1008
Fsp4HI GCNGC 7 cut(s) 28, 63, 290, 375, 410, 474, 720
FspBI CTAG 3 cut(s) 23, 729, 927
GlaI GCGC 1 cut(s) 151
GluI GCNGC 7 cut(s) 28, 63, 290, 375, 410, 474, 720
GsaI CCCAGC 1 cut(s) 409
GsuI CTGGAG 1 cut(s) 332
HaeIII GGCC 5 cut(s) 27, 94, 761, 1043, 1293
HapII CCGG 2 cut(s) 10, 1244
HgaI GACGC 1 cut(s) 446
HhaI GCGC 1 cut(s) 152
Hin1II CATG 4 cut(s) 259, 533, 815, 820
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HindIII AAGCTT 1 cut(s) 857
HinfI GANTC 8 cut(s) 5, 159, 272, 620, 875, 1014, 1058, 1194
HpaII CCGG 2 cut(s) 10, 1244
HphI GGTGA 1 cut(s) 988
Hpy166II GTNNAC 2 cut(s) 536, 851
Hpy188III TCNNGA 5 cut(s) 311, 421, 729, 799, 938
Hpy8I GTNNAC 2 cut(s) 536, 851
HpyCH4III ACNGT 5 cut(s) 286, 325, 453, 986, 1303
HpyCH4IV ACGT 3 cut(s) 35, 298, 427
HpyF10VI GCNNNNNNNGC 3 cut(s) 383, 415, 1166
HpySE526I ACGT 3 cut(s) 35, 298, 427
Hsp92II CATG 4 cut(s) 259, 533, 815, 820
HspAI GCGC 1 cut(s) 150
Ksp22I TGATCA 1 cut(s) 562
Kzo9I GATC 6 cut(s) 97, 108, 307, 394, 562, 1126
LguI GCTCTTC 1 cut(s) 996
LmnI GCTCC 3 cut(s) 313, 661, 1011
Lsp1109I GCAGC 6 cut(s) 49, 276, 386, 396, 485, 731
LweI GCATC 6 cut(s) 26, 361, 460, 485, 683, 798
MaeI CTAG 3 cut(s) 23, 729, 927
MaeII ACGT 3 cut(s) 35, 298, 427
MaeIII GTNAC 2 cut(s) 609, 1297
MalI GATC 6 cut(s) 99, 110, 309, 396, 564, 1128
MboI GATC 6 cut(s) 97, 108, 307, 394, 562, 1126
MfeI CAATTG 1 cut(s) 546
MflI RGATCY 2 cut(s) 108, 394
MhlI GDGCHC 3 cut(s) 96, 538, 1008
MlsI TGGCCA 1 cut(s) 761
MluCI AATT 7 cut(s) 45, 244, 546, 650, 701, 836, 919
MluNI TGGCCA 1 cut(s) 761
MlyI GAGTC 4 cut(s) 153, 629, 1052, 1188
MmeI TCCRAC 2 cut(s) 18, 1222
Mox20I TGGCCA 1 cut(s) 761
Mph1103I ATGCAT 1 cut(s) 813
MroXI GAANNNNTTC 2 cut(s) 45, 736
MscI TGGCCA 1 cut(s) 761
MseI TTAA 4 cut(s) 863, 990, 1028, 1275
MslI CAYNNNNRTG 2 cut(s) 1068, 1277
Msp20I TGGCCA 1 cut(s) 761
MspA1I CMGCKG 2 cut(s) 409, 1169
MspCI CTTAAG 1 cut(s) 989
MspI CCGG 2 cut(s) 10, 1244
MspR9I CCNGG 3 cut(s) 10, 277, 1040
MunI CAATTG 1 cut(s) 546
Mva1269I GAATGC 1 cut(s) 223
MvaI CCWGG 2 cut(s) 277, 1040
MwoI GCNNNNNNNGC 3 cut(s) 383, 415, 1166
NciI CCSGG 1 cut(s) 10
NdeII GATC 6 cut(s) 97, 108, 307, 394, 562, 1126
NlaIII CATG 4 cut(s) 259, 533, 815, 820
NlaIV GGNNCC 2 cut(s) 93, 94
NmuCI GTSAC 1 cut(s) 1297
NsiI ATGCAT 1 cut(s) 813
PaeR7I CTCGAG 2 cut(s) 669, 797
PciSI GCTCTTC 1 cut(s) 996
PcsI WCGNNNNNNNCGW 1 cut(s) 55
PctI GAATGC 1 cut(s) 223
PdmI GAANNNNTTC 2 cut(s) 45, 736
PfeI GAWTC 4 cut(s) 5, 272, 875, 1014
PfoI TCCNGGA 1 cut(s) 275
PinAI ACCGGT 1 cut(s) 1243
PkrI GCNGC 7 cut(s) 29, 64, 291, 376, 411, 475, 721
PleI GAGTC 4 cut(s) 153, 628, 1052, 1188
PpsI GAGTC 4 cut(s) 153, 628, 1052, 1188
Psp124BI GAGCTC 1 cut(s) 1008
Psp1406I AACGTT 2 cut(s) 35, 298
Psp6I CCWGG 2 cut(s) 275, 1038
PspFI CCCAGC 1 cut(s) 405
PspGI CCWGG 2 cut(s) 275, 1038
PspN4I GGNNCC 2 cut(s) 93, 94
PspOMI GGGCCC 1 cut(s) 92
PspPI GGNCC 3 cut(s) 92, 93, 1292
PspXI VCTCGAGB 1 cut(s) 669
PstI CTGCAG 2 cut(s) 67, 294
PsuI RGATCY 2 cut(s) 108, 394
PvuII CAGCTG 2 cut(s) 409, 1169
RsaI GTAC 2 cut(s) 181, 283
RsaNI GTAC 2 cut(s) 180, 282
RseI CAYNNNNRTG 2 cut(s) 1068, 1277
SacI GAGCTC 1 cut(s) 1008
SapI GCTCTTC 1 cut(s) 996
SaqAI TTAA 4 cut(s) 863, 990, 1028, 1275
SatI GCNGC 7 cut(s) 28, 63, 290, 375, 410, 474, 720
Sau3AI GATC 6 cut(s) 97, 108, 307, 394, 562, 1126
Sau96I GGNCC 3 cut(s) 92, 93, 1292
ScaI AGTACT 2 cut(s) 181, 283
SchI GAGTC 4 cut(s) 153, 629, 1052, 1188
ScrFI CCNGG 3 cut(s) 10, 277, 1040
SduI GDGCHC 3 cut(s) 96, 538, 1008
SfaNI GCATC 6 cut(s) 26, 361, 460, 485, 683, 798
SfcI CTRYAG 3 cut(s) 63, 290, 822
Sfr274I CTCGAG 2 cut(s) 669, 797
SlaI CTCGAG 2 cut(s) 669, 797
SmiMI CAYNNNNRTG 2 cut(s) 1068, 1277
SmlI CTYRAG 6 cut(s) 347, 419, 669, 797, 989, 1209
SmoI CTYRAG 6 cut(s) 347, 419, 669, 797, 989, 1209
Sse9I AATT 7 cut(s) 45, 244, 546, 650, 701, 836, 919
SsiI CCGC 2 cut(s) 28, 1306
SspMI CTAG 3 cut(s) 23, 729, 927
SstI GAGCTC 1 cut(s) 1008
StyD4I CCNGG 3 cut(s) 8, 275, 1038
StyI CCWWGG 1 cut(s) 1044
TaaI ACNGT 5 cut(s) 286, 325, 453, 986, 1303
TaiI ACGT 3 cut(s) 38, 301, 430
TaqI TCGA 6 cut(s) 120, 157, 457, 670, 798, 1056
TasI AATT 7 cut(s) 45, 244, 546, 650, 701, 836, 919
TatI WGTACW 2 cut(s) 179, 281
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 4 cut(s) 5, 272, 875, 1014
Tru1I TTAA 4 cut(s) 863, 990, 1028, 1275
Tru9I TTAA 4 cut(s) 863, 990, 1028, 1275
TscAI CASTG 2 cut(s) 968, 1308
TseFI GTSAC 1 cut(s) 1297
TseI GCWGC 6 cut(s) 62, 289, 374, 409, 473, 719
Tsp45I GTSAC 1 cut(s) 1297
TspDTI ATGAA 2 cut(s) 1014, 1295
TspRI CASTG 2 cut(s) 968, 1308
Vha464I CTTAAG 1 cut(s) 989
VneI GTGCAC 1 cut(s) 534
XapI RAATTY 2 cut(s) 45, 244
XbaI TCTAGA 1 cut(s) 728
XhoI CTCGAG 2 cut(s) 669, 797
XmiI GTMKAC 1 cut(s) 850
XmnI GAANNNNTTC 2 cut(s) 45, 736
XspI CTAG 3 cut(s) 23, 729, 927
ZrmI AGTACT 2 cut(s) 181, 283
Zsp2I ATGCAT 1 cut(s) 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.