Rroxscaffold_1G00001750

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
1977730 .. 1979552
1823 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00001750.1

Sequence Viewer

Length: 1746 bp
ATGGTGGATCTTTCCAGCAATCGTTTACATGGTGCAGTTTCATCTTCCTTTTTCCAACAAGCTTGGAATTTGACTGGTTTCAATGTCAGTAACAACACCTTTTCAGGTCCTATCCCATCCTCGATTTGTCATCCTTCTTCTTCCTCGTTACGACACCTTGATTTTTCCTTCAATAATTTCAATGGTAGTATATCTTCTGAATTAGGGAAGTGTTCCAAACTGCAGTTCTTCCGTGCTGGTTACAATTACCTGTCAGGATCGCTTCCAGAAGATATCTTTAATTCTACCATACTTGAAGAGATTTCACTACCTCGGAATTCATTGTATGGAGCAGTGAGTGATAGAATCTCCAACCTCACCAACCTCACAACCCTTGACCTCTCCTATAACCAATTGAGTGGTGTGCTCCCTCTCCATCTTGGGAAGCTCTCCAAGTTGAAACACGTACTCCTTGATTTCAACTATCTGGAAGGTTCATTGCCCCTATCTCTGATGAATTGCACAAACCTTGTTGAACTACGTATGGGAGCCAACAACTTGGGTGGTGATATCTCCATGCTCAATTTTTCCAAACTTAGCCAACTTAGTAAAGTCGACTTGCGACAAAATAACTTCTTTGGTAGTTTGCCGAGAAGCCTCTACTCGTGCAAGTTCTTGAAAGCAATTCAAGTGTCTTACAATAATCTAGAGGTTCAAATAGAGCCTGAAATTCTTTCATTGAAATCCTTGTCCTTCCTCTCACTTGGTTGGAATAAACCTTTGACAAATATCAAAGAGGCAATGAAGATACTGATGGGTTGCAAACGCCTTGCAGCCCTATCATTAGCATCTAGTTTTTTAGGTGAGGAAATGCCGAACGGTGTTGAAATGGCGGATTTTAATGGATTTCAAAATCTTCGAATTTTAGATTTGAGTTCATGTAACCTTAGTGGTATAATTCCTTCATGGCTATCGAAGCTGAAAAAGTTACAGGTCTTGCATCTGCCTAACAACAGAATCACTGGCTCAATTCCAAGTTGGCTGGGGACACTTCCAAAGCTTCAAACATTAAGGATGCAATTCAACCAACTTTCTGGAGAACTTCCAAAGGAACTGTGGACACTCCCTATGTGGGTATCTGAACAAGCTGCAGCTCAAGTAGATCGTACTGCTTTTGATTTGCCTATCTTCCACCCCAGTGTTGATCACGCAAGACCTTTACAGTACAATTACTTATATTTTGCTGCATCTATGTCCCTACGAAACAATAACCTGCATGGGAACATACCTTCTGAGATTGGCCTATCGCAGCTCCTCCAAACTTTGGATCTTAGCAACAACAGCTTCTCTGGCAACATTCCAGACCAGATATCTAACCTGAAGGACATGGAGATGTTGGATCTCTCCATGAACCATTTGTCTGGAAAATCTCGCACTCAGCTCCAAAGTTTCGATGCTTCTGCATTTGAGGAGAATCTGAAACTTTGTGGTGCCCCACTTCCAAATAAGTGTCAGACAACTAAGGGCACTGATGCACCTGAGATGAACACCCAAGATGCAGACATGAAGGAGCATAAATTTCCATGGTTTTATCTTTCTGTTGCATTTGGGTTCATAATAGGATTCTGTGGAGTCTGTGGCCCCTTAATGCTTATGAAGAAGTGGAGGCATGCATATTACCACTTCCTAGACAATGTACAAGACAGGTTCCGGGTGATGATTGCAACGCGCATGGCCAGAGTGAAGAGAAGGTTTATTAGAAGTTAG

Protein Analysis

581

Amino Acids

65.17

Weight (kDa)

8.86

Isoelectric Point (pI)

38.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 288 - 368 2.9e-07 Leucine-rich repeat region
LRR_8 PF13855 298 - 357 7.6e-12 Leucine rich repeat
LRR_4 PF12799 321 - 357 4.4e-07 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1260
AccB1I GGYRCC 1 cut(s) 1469
AccB7I CCANNNNNTGG 1 cut(s) 1303
AccI GTMKAC 1 cut(s) 594
AccII CGCG 1 cut(s) 1708
AciI CCGC 1 cut(s) 872
AclWI GGATC 4 cut(s) 15, 265, 1314, 1386
AcoI YGGCCR 1 cut(s) 1713
AcsI RAATTY 5 cut(s) 67, 316, 708, 900, 1556
AcuI CTGAAG 1 cut(s) 1379
AfaI GTAC 4 cut(s) 447, 1147, 1205, 1677
AfiI CCNNNNNNNGG 2 cut(s) 1111, 1303
AflIII ACRYGT 1 cut(s) 442
AjuI GAANNNNNNNTTGG 2 cut(s) 209, 241
AleI CACNNNNGTG 1 cut(s) 1176
AluBI AGCT 9 cut(s) 62, 427, 958, 1039, 1127, 1133, 1291, 1323, 1420
AluI AGCT 9 cut(s) 62, 427, 958, 1039, 1127, 1133, 1291, 1323, 1420
Alw21I GWGCWC 1 cut(s) 408
AlwI GGATC 4 cut(s) 15, 265, 1314, 1386
AoxI GGCC 3 cut(s) 1279, 1618, 1713
ApeKI GCWGC 5 cut(s) 812, 1127, 1130, 1223, 1288
ApoI RAATTY 5 cut(s) 67, 316, 708, 900, 1556
AspLEI GCGC 1 cut(s) 1710
AspS9I GGNCC 2 cut(s) 107, 1619
AsuC2I CCSGG 1 cut(s) 1691
AsuHPI GGTGA 4 cut(s) 349, 557, 854, 1705
AsuII TTCGAA 1 cut(s) 898
AvaII GGWCC 1 cut(s) 107
BaeGI GKGCMC 2 cut(s) 1474, 1508
BalI TGGCCA 1 cut(s) 1715
BanI GGYRCC 1 cut(s) 1469
BarI GAAGNNNNNNTAC 4 cut(s) 178, 210, 925, 957
BauI CACGAG 1 cut(s) 643
Bbv12I GWGCWC 1 cut(s) 408
BbvI GCAGC 5 cut(s) 824, 1114, 1142, 1210, 1300
BccI CCATC 3 cut(s) 124, 423, 787
BcgI CGANNNNNNTGC 2 cut(s) 1421, 1455
BclI TGATCA 1 cut(s) 1183
BcnI CCSGG 1 cut(s) 1691
BfaI CTAG 3 cut(s) 686, 831, 1667
BfmI CTRYAG 2 cut(s) 221, 1128
BfuAI ACCTGC 1 cut(s) 1260
BisI GCNGC 5 cut(s) 813, 1128, 1131, 1224, 1289
BlsI GCNGC 5 cut(s) 814, 1129, 1132, 1225, 1290
Bme1390I CCNGG 1 cut(s) 1691
Bme18I GGWCC 1 cut(s) 107
BmgT120I GGNCC 2 cut(s) 107, 1619
BmiI GGNNCC 4 cut(s) 529, 1471, 1621, 1688
BmrFI CCNGG 1 cut(s) 1691
BmrI ACTGGG 1 cut(s) 1170
BmsI GCATC 7 cut(s) 836, 988, 1044, 1235, 1423, 1501, 1525
BmuI ACTGGG 1 cut(s) 1170
BpmI CTGGAG 1 cut(s) 1095
Bpu14I TTCGAA 1 cut(s) 898
BpuEI CTTGAG 1 cut(s) 1119
BpuMI CCSGG 1 cut(s) 1691
BsaAI YACGTR 2 cut(s) 445, 521
BsaJI CCNNGG 2 cut(s) 311, 1562
BsaXI ACNNNNNCTCC 2 cut(s) 432, 462
Bsc4I CCNNNNNNNGG 2 cut(s) 1111, 1303
Bse1I ACTGG 3 cut(s) 79, 1006, 1176
Bse3DI GCAATG 2 cut(s) 476, 786
BseDI CCNNGG 2 cut(s) 311, 1562
BseGI GGATG 3 cut(s) 116, 130, 1059
BseLI CCNNNNNNNGG 2 cut(s) 1111, 1303
BseMI GCAATG 2 cut(s) 476, 786
BseMII CTCAG 3 cut(s) 1263, 1430, 1509
BseNI ACTGG 3 cut(s) 79, 1006, 1176
BseRI GAGGAG 2 cut(s) 1283, 1463
BseSI GKGCMC 2 cut(s) 1474, 1508
BseXI GCAGC 5 cut(s) 824, 1114, 1142, 1210, 1300
BseYI CCCAGC 1 cut(s) 1021
BsgI GTGCAG 1 cut(s) 54
Bsh1236I CGCG 1 cut(s) 1708
BshFI GGCC 3 cut(s) 1281, 1620, 1715
BshNI GGYRCC 1 cut(s) 1469
BsiHKAI GWGCWC 1 cut(s) 408
BsiSI CCGG 1 cut(s) 1690
BslFI GGGAC 2 cut(s) 1039, 1219
BslI CCNNNNNNNGG 2 cut(s) 1111, 1303
BsmFI GGGAC 2 cut(s) 1039, 1219
BsnI GGCC 3 cut(s) 1281, 1620, 1715
Bsp119I TTCGAA 1 cut(s) 898
Bsp1286I GDGCHC 3 cut(s) 408, 1474, 1508
Bsp1407I TGTACA 1 cut(s) 1675
Bsp143I GATC 6 cut(s) 7, 257, 1141, 1183, 1306, 1378
Bsp19I CCATGG 1 cut(s) 1562
BspACI CCGC 1 cut(s) 872
BspANI GGCC 3 cut(s) 1281, 1620, 1715
BspCNI CTCAG 3 cut(s) 1264, 1429, 1510
BspFNI CGCG 1 cut(s) 1708
BspLI GGNNCC 4 cut(s) 529, 1471, 1621, 1688
BspMAI CTGCAG 2 cut(s) 225, 1132
BspMI ACCTGC 1 cut(s) 1260
BspPI GGATC 4 cut(s) 15, 265, 1314, 1386
BspT104I TTCGAA 1 cut(s) 898
BspT107I GGYRCC 1 cut(s) 1469
BsrDI GCAATG 2 cut(s) 476, 786
BsrGI TGTACA 1 cut(s) 1675
BsrI ACTGG 3 cut(s) 79, 1006, 1176
BssECI CCNNGG 2 cut(s) 311, 1562
BssMI GATC 6 cut(s) 7, 257, 1141, 1183, 1306, 1378
BssSI CACGAG 1 cut(s) 643
BssT1I CCWWGG 1 cut(s) 1562
Bst2BI CACGAG 1 cut(s) 643
Bst4CI ACNGT 3 cut(s) 860, 1095, 1203
Bst6I CTCTTC 2 cut(s) 291, 1718
BstAUI TGTACA 1 cut(s) 1675
BstBAI YACGTR 2 cut(s) 445, 521
BstBI TTCGAA 1 cut(s) 898
BstC8I GCNNGC 1 cut(s) 1650
BstDEI CTNAG 8 cut(s) 575, 584, 926, 1272, 1310, 1416, 1500, 1518
BstDSI CCRYGG 1 cut(s) 1562
BstF5I GGATG 3 cut(s) 116, 130, 1059
BstFNI CGCG 1 cut(s) 1708
BstHHI GCGC 1 cut(s) 1710
BstKTI GATC 6 cut(s) 10, 260, 1144, 1186, 1309, 1381
BstMBI GATC 6 cut(s) 7, 257, 1141, 1183, 1306, 1378
BstMWI GCNNNNNNNGC 3 cut(s) 955, 1320, 1329
BstNSI RCATGY 1 cut(s) 1652
BstSCI CCNGG 1 cut(s) 1689
BstSFI CTRYAG 2 cut(s) 221, 1128
BstSLI GKGCMC 2 cut(s) 1474, 1508
BstSNI TACGTA 1 cut(s) 521
BstUI CGCG 1 cut(s) 1708
BstV1I GCAGC 5 cut(s) 824, 1114, 1142, 1210, 1300
BstX2I RGATCY 3 cut(s) 7, 1306, 1378
BstXI CCANNNNNNTGG 4 cut(s) 398, 538, 1073, 1400
BstYI RGATCY 3 cut(s) 7, 1306, 1378
BsuRI GGCC 3 cut(s) 1281, 1620, 1715
BtgI CCRYGG 1 cut(s) 1562
BtsCI GGATG 3 cut(s) 116, 130, 1059
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 4 cut(s) 339, 999, 1183, 1506
BveI ACCTGC 1 cut(s) 1260
Cac8I GCNNGC 1 cut(s) 1650
CfoI GCGC 1 cut(s) 1710
Cfr13I GGNCC 2 cut(s) 107, 1619
Csp6I GTAC 4 cut(s) 446, 1146, 1204, 1676
CspCI CAANNNNNGTGG 2 cut(s) 523, 558
CviQI GTAC 4 cut(s) 446, 1146, 1204, 1676
DdeI CTNAG 8 cut(s) 575, 584, 926, 1272, 1310, 1416, 1500, 1518
DpnI GATC 6 cut(s) 9, 259, 1143, 1185, 1308, 1380
DpnII GATC 6 cut(s) 7, 257, 1141, 1183, 1306, 1378
EaeI YGGCCR 1 cut(s) 1713
Eam1104I CTCTTC 2 cut(s) 291, 1718
EarI CTCTTC 2 cut(s) 291, 1718
EciI GGCGGA 1 cut(s) 887
Eco105I TACGTA 1 cut(s) 521
Eco130I CCWWGG 1 cut(s) 1562
Eco32I GATATC 3 cut(s) 274, 550, 1350
Eco47I GGWCC 1 cut(s) 107
Eco57I CTGAAG 1 cut(s) 1379
EcoO109I RGGNCCY 1 cut(s) 107
EcoRI GAATTC 1 cut(s) 316
EcoRV GATATC 3 cut(s) 274, 550, 1350
EcoT14I CCWWGG 1 cut(s) 1562
EcoT22I ATGCAT 1 cut(s) 1654
ErhI CCWWGG 1 cut(s) 1562
FaqI GGGAC 2 cut(s) 1039, 1219
FbaI TGATCA 1 cut(s) 1183
FblI GTMKAC 1 cut(s) 594
Fnu4HI GCNGC 5 cut(s) 813, 1128, 1131, 1224, 1289
FokI GGATG 3 cut(s) 103, 117, 1066
Fsp4HI GCNGC 5 cut(s) 813, 1128, 1131, 1224, 1289
FspBI CTAG 3 cut(s) 686, 831, 1667
GlaI GCGC 1 cut(s) 1709
GluI GCNGC 5 cut(s) 813, 1128, 1131, 1224, 1289
GsaI CCCAGC 1 cut(s) 1025
GsuI CTGGAG 1 cut(s) 1095
HaeIII GGCC 3 cut(s) 1281, 1620, 1715
HapII CCGG 1 cut(s) 1690
HhaI GCGC 1 cut(s) 1710
Hin6I GCGC 1 cut(s) 1708
HinP1I GCGC 1 cut(s) 1708
HincII GTYRAC 1 cut(s) 595
HindII GTYRAC 1 cut(s) 595
HindIII AAGCTT 2 cut(s) 60, 1037
HinfI GANTC 5 cut(s) 345, 996, 1453, 1602, 1611
HpaII CCGG 1 cut(s) 1690
HphI GGTGA 4 cut(s) 349, 557, 854, 1705
Hpy166II GTNNAC 3 cut(s) 26, 595, 1098
Hpy188I TCNGA 7 cut(s) 199, 315, 492, 1120, 1273, 1458, 1494
Hpy188III TCNNGA 8 cut(s) 255, 266, 467, 655, 686, 1074, 1340, 1401
Hpy8I GTNNAC 3 cut(s) 26, 595, 1098
HpyAV CCTTC 9 cut(s) 144, 178, 464, 742, 951, 1278, 1354, 1540, 1722
HpyCH4III ACNGT 3 cut(s) 860, 1095, 1203
HpyCH4IV ACGT 2 cut(s) 444, 520
HpyF10VI GCNNNNNNNGC 3 cut(s) 955, 1320, 1329
HpyF3I CTNAG 8 cut(s) 575, 584, 926, 1272, 1310, 1416, 1500, 1518
HpySE526I ACGT 2 cut(s) 444, 520
HspAI GCGC 1 cut(s) 1708
Ksp22I TGATCA 1 cut(s) 1183
Kzo9I GATC 6 cut(s) 7, 257, 1141, 1183, 1306, 1378
LmnI GCTCC 6 cut(s) 329, 411, 527, 1296, 1425, 1549
Lsp1109I GCAGC 5 cut(s) 824, 1114, 1142, 1210, 1300
LweI GCATC 7 cut(s) 836, 988, 1044, 1235, 1423, 1501, 1525
MaeI CTAG 3 cut(s) 686, 831, 1667
MaeII ACGT 2 cut(s) 444, 520
MaeIII GTNAC 5 cut(s) 89, 147, 239, 920, 966
MalI GATC 6 cut(s) 9, 259, 1143, 1185, 1308, 1380
MboI GATC 6 cut(s) 7, 257, 1141, 1183, 1306, 1378
MfeI CAATTG 1 cut(s) 392
MflI RGATCY 3 cut(s) 7, 1306, 1378
MhlI GDGCHC 3 cut(s) 408, 1474, 1508
MlsI TGGCCA 1 cut(s) 1715
MluNI TGGCCA 1 cut(s) 1715
MlyI GAGTC 1 cut(s) 1620
MmeI TCCRAC 4 cut(s) 79, 375, 728, 1356
Mox20I TGGCCA 1 cut(s) 1715
Mph1103I ATGCAT 1 cut(s) 1654
MscI TGGCCA 1 cut(s) 1715
MseI TTAA 4 cut(s) 279, 879, 1049, 1625
MslI CAYNNNNRTG 2 cut(s) 1176, 1370
Msp20I TGGCCA 1 cut(s) 1715
MspI CCGG 1 cut(s) 1690
MspR9I CCNGG 1 cut(s) 1691
MunI CAATTG 1 cut(s) 392
MvnI CGCG 1 cut(s) 1708
MwoI GCNNNNNNNGC 3 cut(s) 955, 1320, 1329
NciI CCSGG 1 cut(s) 1691
NcoI CCATGG 1 cut(s) 1562
NdeII GATC 6 cut(s) 7, 257, 1141, 1183, 1306, 1378
NlaIV GGNNCC 4 cut(s) 529, 1471, 1621, 1688
NmeAIII GCCGAG 1 cut(s) 654
NsiI ATGCAT 1 cut(s) 1654
NspI RCATGY 1 cut(s) 1652
NspV TTCGAA 1 cut(s) 898
OliI CACNNNNGTG 1 cut(s) 1176
PaeI GCATGC 1 cut(s) 1652
PfeI GAWTC 4 cut(s) 345, 996, 1453, 1602
PflMI CCANNNNNTGG 1 cut(s) 1303
PkrI GCNGC 5 cut(s) 814, 1129, 1132, 1225, 1290
PleI GAGTC 1 cut(s) 1619
PpsI GAGTC 1 cut(s) 1619
Ppu21I YACGTR 2 cut(s) 445, 521
PpuMI RGGWCCY 1 cut(s) 107
Psp5II RGGWCCY 1 cut(s) 107
PspFI CCCAGC 1 cut(s) 1021
PspN4I GGNNCC 4 cut(s) 529, 1471, 1621, 1688
PspPI GGNCC 2 cut(s) 107, 1619
PspPPI RGGWCCY 1 cut(s) 107
PstI CTGCAG 2 cut(s) 225, 1132
PsuI RGATCY 3 cut(s) 7, 1306, 1378
RsaI GTAC 4 cut(s) 447, 1147, 1205, 1677
RsaNI GTAC 4 cut(s) 446, 1146, 1204, 1676
RseI CAYNNNNRTG 2 cut(s) 1176, 1370
SalI GTCGAC 1 cut(s) 593
SaqAI TTAA 4 cut(s) 279, 879, 1049, 1625
SatI GCNGC 5 cut(s) 813, 1128, 1131, 1224, 1289
Sau3AI GATC 6 cut(s) 7, 257, 1141, 1183, 1306, 1378
Sau96I GGNCC 2 cut(s) 107, 1619
SchI GAGTC 1 cut(s) 1620
ScrFI CCNGG 1 cut(s) 1691
SduI GDGCHC 3 cut(s) 408, 1474, 1508
SfaNI GCATC 7 cut(s) 836, 988, 1044, 1235, 1423, 1501, 1525
SfcI CTRYAG 2 cut(s) 221, 1128
SfuI TTCGAA 1 cut(s) 898
SinI GGWCC 1 cut(s) 107
SmiMI CAYNNNNRTG 2 cut(s) 1176, 1370
SmlI CTYRAG 1 cut(s) 1134
SmoI CTYRAG 1 cut(s) 1134
SnaBI TACGTA 1 cut(s) 521
SphI GCATGC 1 cut(s) 1652
SsiI CCGC 1 cut(s) 872
SspMI CTAG 3 cut(s) 686, 831, 1667
StyD4I CCNGG 1 cut(s) 1689
StyI CCWWGG 1 cut(s) 1562
TaaI ACNGT 3 cut(s) 860, 1095, 1203
TaiI ACGT 2 cut(s) 447, 523
TaqI TCGA 5 cut(s) 122, 594, 898, 953, 1431
TatI WGTACW 2 cut(s) 1203, 1675
TfiI GAWTC 4 cut(s) 345, 996, 1453, 1602
Tru1I TTAA 4 cut(s) 279, 879, 1049, 1625
Tru9I TTAA 4 cut(s) 279, 879, 1049, 1625
TscAI CASTG 4 cut(s) 339, 1006, 1183, 1513
TseI GCWGC 5 cut(s) 812, 1127, 1130, 1223, 1288
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 4 cut(s) 339, 1006, 1183, 1513
Van91I CCANNNNNTGG 1 cut(s) 1303
VpaK11BI GGWCC 1 cut(s) 107
XapI RAATTY 5 cut(s) 67, 316, 708, 900, 1556
XbaI TCTAGA 1 cut(s) 685
XceI RCATGY 1 cut(s) 1652
XcmI CCANNNNNNNNNTGG 1 cut(s) 1092
XmiI GTMKAC 1 cut(s) 594
XspI CTAG 3 cut(s) 686, 831, 1667
Zsp2I ATGCAT 1 cut(s) 1654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.