Rroxscaffold_1G00009900

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
12405041 .. 12408044
3004 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00009900.1

Sequence Viewer

Length: 2310 bp
ATGGTAGAGCAGTCTAATCATCTATCTTCCAATTTCATCCTCTTCATTTTCTTTATCTCAACTACACTGATTTCTGCAACCCCTGCATGCAACAAAATAGATCGAGACTCTCTTTGGTCCTCTTTTAATATGCCATCTTCTCCTTTGAATTGGTCCTCCAATGATTGCTGCAAATGGGAAGGCATCACCTGTGATACAGCTGGCCGAGTTAAACATCTATGGCTTCCATCCAAAGGGCTCAAACTCAAAGGAAGTTTTTTCCCCTCATCATCACTTGGAAATCTCACACATCTCACACTCCTTAATCTCTCTCGCAATTCACTGTATGGTTCACTTGATCAAACTGGATTCTTCTCATCTTTGAGTCGTCTTGAAATCCTAGATTTGAGCTATAACTCTCTTTTTGGAGAACTACCATTTTCTCTACCATCCGGTAATACGCGGAGACTGGATTTTTCCAGCAACCACTTCCACGGTTCAATTCCATCTTCATTCTTCAAACAAGCTTGGAATTTGGCCAGTTTTAACGTCAGACACCTTCTCAGTATTTCTGGTGGGTTGGGAAAGTGTTCGAAACTTCATATTTTTCGTGCTGCTCACAATAACCTCTCAGGAATACTCCCAATTGATATTTATAATGCTACCCAGCTTGAAGAAATTTCGTTACCTCAAAATTCACTATATGGAGACATTAGTGAAAGAATTGTCAATCTCGCGACTCTCAAAACCCTTGACCTCAGCTCTAATGGATTCAGTGGCATGCTTCCTATAAGTATTGGTAAGCTCTCCAAATTGAAACTCTTGTTCCTTCGATTCAATAATCTAAAAGGTTCTTTGCCCTTATCTTTGATGAATTGCACCAACCTCAAGGAATTGTATCTGGGATACAACAATTTGGAAGGAAATATTTCCGCGCTCAACTTCTCCAAACTTAGTCAGCTTACTAAACTAGATCTAGAGAGCAATTACCTGACCGGTATCATTCCAAGAAGCCTTTACTCATGCAAGTCCCTAAAAGCAATTCGGATAAGCTATAACAAGCTAGAGGGAGAAATACATCCTGATATTCTATCGTTGAAATCATTGTCATTCTTGTCGCTTGGTTATAATAGATTGACCAATATCACAGGGGCAATGAAGATATTGATGTATTGCAAAAGCCTAGTATTCCTTGCCTTACCAGGTAGCTTTGTAGGCGAGGAAATGCCCGATCTTGACATGGTTGATTTTGATGGATTCCAAAACCTTCGATTTTTATCTCTCGCCAACTGTGAGCTCATTGGTCATATACCTGCATATTTATCTAAGCTCGAAAAGCTAGAGCTCTTGTATCTCGGAAACAATAGAATCACAGGGTCAATTCCTACTTGGTTAGGGAATCTTCCAAGGCTCTATTCTATCGACTTGTCAGCCAACCTACTCTCAGGTGAGTTTCCCAAGGAACTTTGTAGATTGCCAATGTTGGTATCGAAAGGAACTGCAGCTCAAGTAGACGGTGATGAACTTGAGTTACCTGTCTACGCGGGCCAAGGTGCATCAGTTTTACAATACAAATGGTCTTACTTTCCTGTAGCAATAAGCATAAGCAATAATACCATTAGTGGGAGCATACCTGTTGAGATTGGTCAATTACAGCTTCTCCATTACTTGGGTCTTAGCAACAATAACTTGTCAGGCAACATTCCAGACCAAGTATCTAATCTGAAGAGCTTGGAGCACTTGGATCTCTCCATGAATCATTTGTCCGGAAAAATCCCATTATCATTTACAAGGCTTACTTTCTTGCACTTTTTTAATGTGTCATACAATAATCTGGAAGGTTCAATACCAGCAAGCACCCAACTCCAAAGCTTGAATGCTTCTGCATTTGAGGGGAATGAAAATCTTTGTGGTGCTCCACTTCCAAAAAAGTGCCTACTGATCGAAGACAAGGATGCTAATAGCAGGAACAGCCGAGATGATGTGGGGAATGATGATGAAAGTCAAATTCCATGGCTTCATATTTTCTTTGCTCTTGGGTTCATTGTAGGATTTTGGGGAGTGTTTGGGCCTCTGGTGCTTAAACAAAACTGGAGATATGCATATTTTCAATTCCTAGACAGAGCTCAATTTAGGCTCTATGTGATGCAGTTTAGCACCCAGTTCCAGAGCTTCGATGTTTCTGCATTGGAGGGGAATCCTAAACTTTGTGGTGATCCACTTCCAAAGAAGTGCCTACCAGTCAATGGCATTACCCAACACCATGAGGAGAATGGGGATCAAAATCAAATTGCATGGTATCCTGTATTTGGTGTGCTCTTGGGTTCATAG

Protein Analysis

769

Amino Acids

85.45

Weight (kDa)

6.79

Isoelectric Point (pI)

31.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 214 - 319 3.1e-07 Leucine-rich repeat region
LRR_8 PF13855 240 - 299 1.7e-06 Leucine rich repeat
LRR_8 PF13855 287 - 348 6e-10 Leucine rich repeat
LRR_8 PF13855 415 - 474 1.3e-06 Leucine rich repeat
LRR_14 PF23598 540 - 621 1.4e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 636, 1107
Acc36I ACCTGC 1 cut(s) 1300
AccB7I CCANNNNNTGG 2 cut(s) 1648, 2225
AccI GTMKAC 2 cut(s) 1491, 1518
AccII CGCG 4 cut(s) 442, 716, 914, 1523
AccIII TCCGGA 1 cut(s) 1745
AciI CCGC 3 cut(s) 442, 912, 1523
AclWI GGATC 3 cut(s) 1731, 2189, 2265
AcoI YGGCCR 2 cut(s) 202, 516
AcsI RAATTY 4 cut(s) 511, 657, 673, 1986
AcuI CTGAAG 1 cut(s) 1724
AfiI CCNNNNNNNGG 5 cut(s) 233, 1602, 1648, 2225, 2288
AgeI ACCGGT 1 cut(s) 974
AjnI CCWGG 1 cut(s) 1180
AjuI GAANNNNNNNTTGG 2 cut(s) 1378, 1410
Alw21I GWGCWC 6 cut(s) 1278, 1326, 1719, 1897, 2107, 2298
Alw26I GTCTC 3 cut(s) 99, 439, 681
AlwI GGATC 3 cut(s) 1731, 2189, 2265
Aor13HI TCCGGA 1 cut(s) 1745
AoxI GGCC 4 cut(s) 202, 516, 1525, 2048
ApeKI GCWGC 3 cut(s) 168, 593, 1481
ApoI RAATTY 4 cut(s) 511, 657, 673, 1986
AsiGI ACCGGT 1 cut(s) 974
Asp700I GAANNNNTTC 2 cut(s) 568, 907
AspLEI GCGC 1 cut(s) 916
AspS9I GGNCC 4 cut(s) 117, 153, 1525, 2048
AsuHPI GGTGA 4 cut(s) 178, 1439, 1508, 2204
AsuII TTCGAA 1 cut(s) 572
AvaII GGWCC 2 cut(s) 117, 153
BalI TGGCCA 1 cut(s) 518
BanII GRGCYC 4 cut(s) 240, 1278, 1326, 2107
BarI GAAGNNNNNNTAC 2 cut(s) 1809, 1841
BbsI GAAGAC 1 cut(s) 1932
Bbv12I GWGCWC 6 cut(s) 1278, 1326, 1719, 1897, 2107, 2298
BbvCI CCTCAGC 1 cut(s) 737
BbvI GCAGC 3 cut(s) 155, 580, 1493
BccI CCATC 5 cut(s) 142, 235, 436, 493, 1226
BcgI CGANNNNNNTGC 2 cut(s) 2144, 2178
BciT130I CCWGG 1 cut(s) 1182
BciVI GTATCC 2 cut(s) 878, 2289
BclI TGATCA 1 cut(s) 337
BcoDI GTCTC 3 cut(s) 99, 439, 681
BfaI CTAG 7 cut(s) 380, 950, 956, 1043, 1163, 1319, 2096
BfmI CTRYAG 2 cut(s) 1479, 1569
BfuAI ACCTGC 1 cut(s) 1300
BfuI GTATCC 2 cut(s) 878, 2289
BglII AGATCT 1 cut(s) 952
BisI GCNGC 3 cut(s) 169, 594, 1482
BlsI GCNGC 3 cut(s) 170, 595, 1483
Bme1390I CCNGG 1 cut(s) 1182
Bme18I GGWCC 2 cut(s) 117, 153
BmgT120I GGNCC 4 cut(s) 117, 153, 1525, 2048
BmrFI CCNGG 1 cut(s) 1182
BmrI ACTGGG 1 cut(s) 2134
BmsI GCATC 4 cut(s) 192, 1544, 1924, 2115
BmuI ACTGGG 1 cut(s) 2134
BpiI GAAGAC 1 cut(s) 1932
BpmI CTGGAG 1 cut(s) 2092
Bpu10I CCTNAGC 1 cut(s) 737
Bpu14I TTCGAA 1 cut(s) 572
BpuEI CTTGAG 3 cut(s) 851, 1470, 1526
BsaBI GATNNNNATC 2 cut(s) 1255, 2262
BsaJI CCNNGG 5 cut(s) 472, 1385, 1437, 1528, 1991
BsaWI WCCGGW 3 cut(s) 431, 974, 1745
BsaXI ACNNNNNCTCC 2 cut(s) 1623, 1653
Bsc4I CCNNNNNNNGG 5 cut(s) 233, 1602, 1648, 2225, 2288
Bse118I RCCGGY 1 cut(s) 974
Bse1I ACTGG 6 cut(s) 349, 453, 519, 2075, 2140, 2219
Bse3DI GCAATG 1 cut(s) 1140
Bse8I GATNNNNATC 2 cut(s) 1255, 2262
BseAI TCCGGA 1 cut(s) 1745
BseBI CCWGG 1 cut(s) 1182
BseDI CCNNGG 5 cut(s) 472, 1385, 1437, 1528, 1991
BseGI GGATG 5 cut(s) 36, 227, 428, 1057, 1939
BseJI GATNNNNATC 2 cut(s) 1255, 2262
BseLI CCNNNNNNNGG 5 cut(s) 233, 1602, 1648, 2225, 2288
BseMI GCAATG 1 cut(s) 1140
BseMII CTCAG 4 cut(s) 556, 624, 751, 1437
BseNI ACTGG 6 cut(s) 349, 453, 519, 2075, 2140, 2219
BseRI GAGGAG 1 cut(s) 2261
BseXI GCAGC 3 cut(s) 155, 580, 1493
BseYI CCCAGC 1 cut(s) 645
Bsh1236I CGCG 4 cut(s) 442, 716, 914, 1523
BshFI GGCC 4 cut(s) 204, 518, 1527, 2050
BshTI ACCGGT 1 cut(s) 974
BsiHKAI GWGCWC 6 cut(s) 1278, 1326, 1719, 1897, 2107, 2298
BsiSI CCGG 3 cut(s) 432, 975, 1746
BslFI GGGAC 1 cut(s) 994
BslI CCNNNNNNNGG 5 cut(s) 233, 1602, 1648, 2225, 2288
BsmAI GTCTC 3 cut(s) 99, 439, 681
BsmFI GGGAC 1 cut(s) 994
BsmI GAATGC 1 cut(s) 1861
BsnI GGCC 4 cut(s) 204, 518, 1527, 2050
Bsp119I TTCGAA 1 cut(s) 572
Bsp1286I GDGCHC 7 cut(s) 240, 1278, 1326, 1719, 1897, 2107, 2298
Bsp13I TCCGGA 1 cut(s) 1745
Bsp143I GATC 8 cut(s) 100, 337, 952, 1210, 1723, 1920, 2194, 2257
Bsp19I CCATGG 1 cut(s) 1991
Bsp68I TCGCGA 1 cut(s) 716
BspACI CCGC 3 cut(s) 442, 912, 1523
BspANI GGCC 4 cut(s) 204, 518, 1527, 2050
BspCNI CTCAG 4 cut(s) 555, 623, 750, 1436
BspEI TCCGGA 1 cut(s) 1745
BspFNI CGCG 4 cut(s) 442, 716, 914, 1523
BspMAI CTGCAG 1 cut(s) 1483
BspMI ACCTGC 1 cut(s) 1300
BspPI GGATC 3 cut(s) 1731, 2189, 2265
BspQI GCTCTTC 1 cut(s) 1700
BspT104I TTCGAA 1 cut(s) 572
BsrDI GCAATG 1 cut(s) 1140
BsrFI RCCGGY 1 cut(s) 974
BsrI ACTGG 6 cut(s) 349, 453, 519, 2075, 2140, 2219
BssAI RCCGGY 1 cut(s) 974
BssECI CCNNGG 5 cut(s) 472, 1385, 1437, 1528, 1991
BssMI GATC 8 cut(s) 100, 337, 952, 1210, 1723, 1920, 2194, 2257
BssT1I CCWWGG 4 cut(s) 1385, 1437, 1528, 1991
Bst2UI CCWGG 1 cut(s) 1182
Bst4CI ACNGT 4 cut(s) 324, 476, 1271, 1496
Bst6I CTCTTC 2 cut(s) 47, 1700
BstAPI GCANNNNNTGC 1 cut(s) 83
BstBI TTCGAA 1 cut(s) 572
BstC8I GCNNGC 5 cut(s) 88, 202, 761, 1525, 1834
BstDEI CTNAG 7 cut(s) 542, 610, 737, 932, 1305, 1423, 1655
BstDSI CCRYGG 2 cut(s) 472, 1991
BstF5I GGATG 5 cut(s) 36, 227, 428, 1057, 1939
BstFNI CGCG 4 cut(s) 442, 716, 914, 1523
BstHHI GCGC 1 cut(s) 916
BstKTI GATC 8 cut(s) 103, 340, 955, 1213, 1726, 1923, 2197, 2260
BstMAI GTCTC 3 cut(s) 99, 439, 681
BstMBI GATC 8 cut(s) 100, 337, 952, 1210, 1723, 1920, 2194, 2257
BstMWI GCNNNNNNNGC 5 cut(s) 83, 1194, 1315, 1950, 2056
BstNI CCWGG 1 cut(s) 1182
BstNSI RCATGY 2 cut(s) 90, 763
BstSCI CCNGG 1 cut(s) 1180
BstSFI CTRYAG 2 cut(s) 1479, 1569
BstUI CGCG 4 cut(s) 442, 716, 914, 1523
BstV1I GCAGC 3 cut(s) 155, 580, 1493
BstV2I GAAGAC 1 cut(s) 1932
BstX2I RGATCY 2 cut(s) 952, 1723
BstYI RGATCY 2 cut(s) 952, 1723
BsuI GTATCC 2 cut(s) 878, 2289
BsuRI GGCC 4 cut(s) 204, 518, 1527, 2050
BtgI CCRYGG 2 cut(s) 472, 1991
BtsCI GGATG 5 cut(s) 36, 227, 428, 1057, 1939
BtsIMutI CAGTG 3 cut(s) 65, 320, 760
BtuMI TCGCGA 1 cut(s) 716
BveI ACCTGC 1 cut(s) 1300
Cac8I GCNNGC 5 cut(s) 88, 202, 761, 1525, 1834
CfoI GCGC 1 cut(s) 916
Cfr10I RCCGGY 1 cut(s) 974
Cfr13I GGNCC 4 cut(s) 117, 153, 1525, 2048
CsiI ACCWGGT 1 cut(s) 1180
CspAI ACCGGT 1 cut(s) 974
CviAII CATG 8 cut(s) 87, 760, 1002, 1219, 1732, 1992, 2243, 2274
DdeI CTNAG 7 cut(s) 542, 610, 737, 932, 1305, 1423, 1655
DpnI GATC 8 cut(s) 102, 339, 954, 1212, 1725, 1922, 2196, 2259
DpnII GATC 8 cut(s) 100, 337, 952, 1210, 1723, 1920, 2194, 2257
EaeI YGGCCR 2 cut(s) 202, 516
Eam1104I CTCTTC 2 cut(s) 47, 1700
EarI CTCTTC 2 cut(s) 47, 1700
Ecl136II GAGCTC 3 cut(s) 1276, 1324, 2105
Eco130I CCWWGG 4 cut(s) 1385, 1437, 1528, 1991
Eco24I GRGCYC 4 cut(s) 240, 1278, 1326, 2107
Eco47I GGWCC 2 cut(s) 117, 153
Eco53kI GAGCTC 3 cut(s) 1276, 1324, 2105
Eco57I CTGAAG 1 cut(s) 1724
EcoICRI GAGCTC 3 cut(s) 1276, 1324, 2105
EcoRII CCWGG 1 cut(s) 1180
EcoT14I CCWWGG 4 cut(s) 1385, 1437, 1528, 1991
EcoT22I ATGCAT 1 cut(s) 2083
EcoT38I GRGCYC 4 cut(s) 240, 1278, 1326, 2107
ErhI CCWWGG 4 cut(s) 1385, 1437, 1528, 1991
FaeI CATG 8 cut(s) 90, 763, 1005, 1222, 1735, 1995, 2246, 2277
FalI AAGNNNNNCTT 2 cut(s) 1762, 1794
FaqI GGGAC 1 cut(s) 994
FatI CATG 8 cut(s) 86, 759, 1001, 1218, 1731, 1991, 2242, 2273
FauI CCCGC 1 cut(s) 1516
FbaI TGATCA 1 cut(s) 337
FblI GTMKAC 2 cut(s) 1491, 1518
Fnu4HI GCNGC 3 cut(s) 169, 594, 1482
FokI GGATG 5 cut(s) 23, 214, 415, 1044, 1946
FriOI GRGCYC 4 cut(s) 240, 1278, 1326, 2107
Fsp4HI GCNGC 3 cut(s) 169, 594, 1482
FspBI CTAG 7 cut(s) 380, 950, 956, 1043, 1163, 1319, 2096
GlaI GCGC 1 cut(s) 915
GluI GCNGC 3 cut(s) 169, 594, 1482
GsaI CCCAGC 1 cut(s) 649
GsuI CTGGAG 1 cut(s) 2092
HaeIII GGCC 4 cut(s) 204, 518, 1527, 2050
HapII CCGG 3 cut(s) 432, 975, 1746
HhaI GCGC 1 cut(s) 916
Hin1II CATG 8 cut(s) 90, 763, 1005, 1222, 1735, 1995, 2246, 2277
Hin6I GCGC 1 cut(s) 914
HinP1I GCGC 1 cut(s) 914
HindIII AAGCTT 2 cut(s) 504, 1849
HpaII CCGG 3 cut(s) 432, 975, 1746
HphI GGTGA 4 cut(s) 178, 1439, 1508, 2204
Hpy166II GTNNAC 3 cut(s) 332, 1492, 1519
Hpy188I TCNGA 4 cut(s) 533, 1026, 1337, 1704
Hpy8I GTNNAC 3 cut(s) 332, 1492, 1519
HpyAV CCTTC 6 cut(s) 173, 548, 818, 893, 1256, 1811
HpyCH4III ACNGT 4 cut(s) 324, 476, 1271, 1496
HpyCH4IV ACGT 1 cut(s) 528
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 1194, 1315, 1950, 2056
HpyF3I CTNAG 7 cut(s) 542, 610, 737, 932, 1305, 1423, 1655
HpySE526I ACGT 1 cut(s) 528
Hsp92II CATG 8 cut(s) 90, 763, 1005, 1222, 1735, 1995, 2246, 2277
HspAI GCGC 1 cut(s) 914
Kpn2I TCCGGA 1 cut(s) 1745
Ksp22I TGATCA 1 cut(s) 337
Kzo9I GATC 8 cut(s) 100, 337, 952, 1210, 1723, 1920, 2194, 2257
LguI GCTCTTC 1 cut(s) 1700
LmnI GCTCC 3 cut(s) 1605, 1714, 1900
Lsp1109I GCAGC 3 cut(s) 155, 580, 1493
LweI GCATC 4 cut(s) 192, 1544, 1924, 2115
MabI ACCWGGT 1 cut(s) 1180
MaeI CTAG 7 cut(s) 380, 950, 956, 1043, 1163, 1319, 2096
MaeII ACGT 1 cut(s) 528
MaeIII GTNAC 2 cut(s) 663, 1509
MalI GATC 8 cut(s) 102, 339, 954, 1212, 1725, 1922, 2196, 2259
MboI GATC 8 cut(s) 100, 337, 952, 1210, 1723, 1920, 2194, 2257
MfeI CAATTG 1 cut(s) 624
MflI RGATCY 2 cut(s) 952, 1723
MhlI GDGCHC 7 cut(s) 240, 1278, 1326, 1719, 1897, 2107, 2298
MlsI TGGCCA 1 cut(s) 518
MluNI TGGCCA 1 cut(s) 518
MlyI GAGTC 3 cut(s) 101, 373, 712
Mox20I TGGCCA 1 cut(s) 518
Mph1103I ATGCAT 1 cut(s) 2083
MroI TCCGGA 1 cut(s) 1745
MroXI GAANNNNTTC 2 cut(s) 568, 907
MscI TGGCCA 1 cut(s) 518
MseI TTAA 6 cut(s) 126, 210, 303, 525, 1794, 2061
Msp20I TGGCCA 1 cut(s) 518
MspA1I CMGCKG 1 cut(s) 200
MspI CCGG 3 cut(s) 432, 975, 1746
MspR9I CCNGG 1 cut(s) 1182
MunI CAATTG 1 cut(s) 624
Mva1269I GAATGC 1 cut(s) 1861
MvaI CCWGG 1 cut(s) 1182
MvnI CGCG 4 cut(s) 442, 716, 914, 1523
MwoI GCNNNNNNNGC 5 cut(s) 83, 1194, 1315, 1950, 2056
NcoI CCATGG 1 cut(s) 1991
NdeII GATC 8 cut(s) 100, 337, 952, 1210, 1723, 1920, 2194, 2257
NlaIII CATG 8 cut(s) 90, 763, 1005, 1222, 1735, 1995, 2246, 2277
NmeAIII GCCGAG 2 cut(s) 230, 1979
NruI TCGCGA 1 cut(s) 716
NsiI ATGCAT 1 cut(s) 2083
NspI RCATGY 2 cut(s) 90, 763
NspV TTCGAA 1 cut(s) 572
PaeI GCATGC 2 cut(s) 90, 763
PciSI GCTCTTC 1 cut(s) 1700
PctI GAATGC 1 cut(s) 1861
PdmI GAANNNNTTC 2 cut(s) 568, 907
PfeI GAWTC 8 cut(s) 348, 750, 813, 1236, 1347, 1378, 1735, 2176
PflMI CCANNNNNTGG 2 cut(s) 1648, 2225
PinAI ACCGGT 1 cut(s) 974
PkrI GCNGC 3 cut(s) 170, 595, 1483
PleI GAGTC 3 cut(s) 101, 372, 712
PpsI GAGTC 3 cut(s) 101, 372, 712
PsiI TTATAA 2 cut(s) 636, 1107
Psp124BI GAGCTC 3 cut(s) 1278, 1326, 2107
Psp6I CCWGG 1 cut(s) 1180
PspFI CCCAGC 1 cut(s) 645
PspGI CCWGG 1 cut(s) 1180
PspPI GGNCC 4 cut(s) 117, 153, 1525, 2048
PsrI GAACNNNNNNTAC 2 cut(s) 1494, 1526
PstI CTGCAG 1 cut(s) 1483
PsuI RGATCY 2 cut(s) 952, 1723
PvuII CAGCTG 1 cut(s) 200
RruI TCGCGA 1 cut(s) 716
SacI GAGCTC 3 cut(s) 1278, 1326, 2107
SapI GCTCTTC 1 cut(s) 1700
SaqAI TTAA 6 cut(s) 126, 210, 303, 525, 1794, 2061
SatI GCNGC 3 cut(s) 169, 594, 1482
Sau3AI GATC 8 cut(s) 100, 337, 952, 1210, 1723, 1920, 2194, 2257
Sau96I GGNCC 4 cut(s) 117, 153, 1525, 2048
SchI GAGTC 3 cut(s) 101, 373, 712
ScrFI CCNGG 1 cut(s) 1182
SduI GDGCHC 7 cut(s) 240, 1278, 1326, 1719, 1897, 2107, 2298
SexAI ACCWGGT 1 cut(s) 1180
SfaNI GCATC 4 cut(s) 192, 1544, 1924, 2115
SfcI CTRYAG 2 cut(s) 1479, 1569
SfuI TTCGAA 1 cut(s) 572
SinI GGWCC 2 cut(s) 117, 153
SmlI CTYRAG 3 cut(s) 866, 1485, 1505
SmoI CTYRAG 3 cut(s) 866, 1485, 1505
SphI GCATGC 2 cut(s) 90, 763
SsiI CCGC 3 cut(s) 442, 912, 1523
SspI AATATT 1 cut(s) 907
SspMI CTAG 7 cut(s) 380, 950, 956, 1043, 1163, 1319, 2096
SstI GAGCTC 3 cut(s) 1278, 1326, 2107
StyD4I CCNGG 1 cut(s) 1180
StyI CCWWGG 4 cut(s) 1385, 1437, 1528, 1991
TaaI ACNGT 4 cut(s) 324, 476, 1271, 1496
TaiI ACGT 1 cut(s) 531
TaqI TCGA 9 cut(s) 103, 572, 811, 1249, 1311, 1401, 1469, 1923, 2154
TfiI GAWTC 8 cut(s) 348, 750, 813, 1236, 1347, 1378, 1735, 2176
Tru1I TTAA 6 cut(s) 126, 210, 303, 525, 1794, 2061
Tru9I TTAA 6 cut(s) 126, 210, 303, 525, 1794, 2061
TscAI CASTG 3 cut(s) 72, 327, 760
TseI GCWGC 3 cut(s) 168, 593, 1481
TspRI CASTG 3 cut(s) 72, 327, 760
Van91I CCANNNNNTGG 2 cut(s) 1648, 2225
VpaK11BI GGWCC 2 cut(s) 117, 153
XapI RAATTY 4 cut(s) 511, 657, 673, 1986
XbaI TCTAGA 1 cut(s) 955
XceI RCATGY 2 cut(s) 90, 763
XcmI CCANNNNNNNNNTGG 1 cut(s) 2249
XmiI GTMKAC 2 cut(s) 1491, 1518
XmnI GAANNNNTTC 2 cut(s) 568, 907
XspI CTAG 7 cut(s) 380, 950, 956, 1043, 1163, 1319, 2096
Zsp2I ATGCAT 1 cut(s) 2083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.