Rroxscaffold_4G00325770

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
57670791 .. 57672968
2178 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00325770.1

Sequence Viewer

Length: 1755 bp
ATGCTGCCTTATCACCCAATAGCTCACTACTTTCTTCTTACTCTACTAGGCTCCATTTTATCTACACATATTCATGCATGCACCTCAAGTGAAAGTACCTCTCTCTTGTCTTTCGCCTTCACTCTGTCTTCTCCTTCCTTAAATTGGACTACCATGGATTGTTGCCAATGGGAAGGCATTACTTGTGATGTGGCTGGTCGAGTAACCCATTTGCACTTATCCTCCAAAGGCCTCAAACTCAAAGGAGATCAAGCTGGATTCATCTTGTCCTTGGGTCCTCTTGAGGTACTTGATTTGAGCTTTAACCTTCTTTCTGGAGAGCTACCAGGTTCTCTATCCAATAATATTCGGATGGTGGATTTGTCTAGCAATCGCTTCCATGGTGCAATTCCATCCTCCTTCTTCCAACAAGCAAAGAATTTGACTCGATTCAATGTCACAAACAATGACTTCTCAGGAAACTGTTCCAAACTGGAAGTTTTCCGTGCTGGTTACAATAGCCTCTCAGGATCACTTCCAGAAGATATCTATTATGCTACCGCACTAGAAGAAATTGCAATCCCTGCTAATTCCTTTTATGGAGGCATTAGTAACAGAATTCTTAACCTCACTAACCTCGCAATCCTTGACCTCTACTTAAATAATTTCAGTGGCATGCTTCCAATAGATATTGGTAAGCTCTCCAAATTGAAAGTCTTGCTCCTTCATTCCAACAAACTAGAAGGTTTCTTGCCACCATCTTTGGTGAATTGCACAAACCTTATGGAACTGAATCTAGGATTCAACCTTTTGAAAGGAAATATCTCAGCTTTTAATTTCTCCAGACTTGGTCAACTTCGTAAACTGGACTTCATGAGTAATCATTTTACCGGTATCTTGCCAATAAGCCTTTACTCATGCAAGTCCCTTAGAGCAATTCGACTAAGCTTAAACAACCTAGAGGGACAAATACAACCCGAGATTGTCTCATTGAAACACTTGTCCTTCCTCTCACTTTCTGGGAACAGACTGACCAATGTCACAGGTGCTATGAATATATTGAAGGGCTGTAGACGTCTCACGGTACTCATCCTTTCAACCACTTTTATAGGTGAAGAAATGCCGGATGGTGCTCACATGGCTGACTTTGATGGATTCCAAAATCTTAGGATTTTGGCTTTGCGTGGTTGTGAAATTCCAAAAGAACTTTGCACACTACCAATGTTGTTATCTGAACAAACTGCAGCTCAAGTAGATCATGGTTATCTTGAATTGCCTTTCTTCGCTTCCCAAGCCGTGCCTGATGCAAGTATTTTACAGTTCAACTCTTTGTCTTACTATCCACCATCGATATTCTTAGGCAACAATAGCATCAGTGGCAATATACCTACTGAGATAGGAAAGTTGCAACGTCTCCGTACATTGGATCTCAGTGCCAACCAGGTGTCTGGCAACATTCCAGACCAAATATCTAATCTAAAAAATTTGGAGAAGTTGGATCTTTCAGTGAATCATTTGTCTGGAGAAATCCCATCTTCAATGAAAAGTCTTAGTTTCTTGTCATATTTTAATGTCTCATATAATAATTTGGAAGGAGAAATACCAAAAAGCACTCAGCTCCAAGGCTTGAATGTCTCAGCATTTGAGGGGGAATCTGAAGCTTTGTGGTTCCCCCCTTCTAACTCTGTGTCAATCATTCAATGGGTTAGTGGGAGTTTGTGGTTCCTTATTGCTTATCAAGACCTGGAGAGATGCATATTTCAAATTCCTGAATAA

Protein Analysis

584

Amino Acids

64.32

Weight (kDa)

5.83

Isoelectric Point (pI)

36.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 278 - 337 2.4e-06 Leucine rich repeat
LRR_14 PF23598 453 - 542 4.3e-09 Leucine-rich repeat region
LRR_8 PF13855 464 - 523 1e-05 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1057
AccI GTMKAC 1 cut(s) 1051
AciI CCGC 1 cut(s) 540
AclWI GGATC 3 cut(s) 517, 1413, 1485
AcsI RAATTY 5 cut(s) 418, 597, 1173, 1462, 1743
AcuI CTGAAG 1 cut(s) 1656
AcyI GRCGYC 1 cut(s) 1054
AfaI GTAC 4 cut(s) 97, 288, 1065, 1399
AfiI CCNNNNNNNGG 2 cut(s) 144, 1402
AgeI ACCGGT 1 cut(s) 869
AjnI CCWGG 3 cut(s) 325, 1419, 1722
Alw21I GWGCWC 1 cut(s) 1114
Alw26I GTCTC 5 cut(s) 970, 1061, 1397, 1558, 1618
AlwI GGATC 3 cut(s) 517, 1413, 1485
Ama87I CYCGRG 1 cut(s) 956
AoxI GGCC 1 cut(s) 229
ApeKI GCWGC 2 cut(s) 4, 1223
ApoI RAATTY 5 cut(s) 418, 597, 1173, 1462, 1743
ArsI GACNNNNNNTTYG 2 cut(s) 678, 710
AsiGI ACCGGT 1 cut(s) 869
Asp700I GAANNNNTTC 1 cut(s) 463
AspS9I GGNCC 1 cut(s) 275
AsuHPI GGTGA 3 cut(s) 5, 757, 1103
AvaI CYCGRG 1 cut(s) 956
AvaII GGWCC 1 cut(s) 275
BarI GAAGNNNNNNTAC 2 cut(s) 1563, 1595
BbsI GAAGAC 1 cut(s) 120
Bbv12I GWGCWC 1 cut(s) 1114
BbvI GCAGC 1 cut(s) 1235
BccI CCATC 7 cut(s) 346, 400, 745, 1100, 1124, 1333, 1519
BceAI ACGGC 1 cut(s) 1259
BciT130I CCWGG 3 cut(s) 327, 1421, 1724
BcoDI GTCTC 5 cut(s) 970, 1061, 1397, 1558, 1618
BfaI CTAG 6 cut(s) 47, 366, 545, 719, 776, 938
BfmI CTRYAG 2 cut(s) 1048, 1221
BisI GCNGC 2 cut(s) 5, 1224
BlsI GCNGC 2 cut(s) 6, 1225
Bme1390I CCNGG 3 cut(s) 327, 1421, 1724
Bme18I GGWCC 1 cut(s) 275
BmeT110I CYCGRG 1 cut(s) 956
BmgT120I GGNCC 1 cut(s) 275
BmiI GGNNCC 4 cut(s) 52, 276, 1649, 1703
BmrFI CCNGG 3 cut(s) 327, 1421, 1724
BmsI GCATC 3 cut(s) 1273, 1359, 1721
BoxI GACNNNNGTC 1 cut(s) 1016
BpiI GAAGAC 1 cut(s) 120
BplI GAGNNNNNCTC 2 cut(s) 950, 982
BpmI CTGGAG 4 cut(s) 336, 805, 1521, 1745
BpuEI CTTGAG 3 cut(s) 70, 302, 1212
Bsa29I ATCGAT 1 cut(s) 1328
BsaHI GRCGYC 1 cut(s) 1054
BsaJI CCNNGG 4 cut(s) 153, 270, 379, 1600
BsaWI WCCGGW 1 cut(s) 869
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 1402
Bse118I RCCGGY 1 cut(s) 869
Bse1I ACTGG 2 cut(s) 477, 849
BseBI CCWGG 3 cut(s) 327, 1421, 1724
BseCI ATCGAT 1 cut(s) 1328
BseDI CCNNGG 4 cut(s) 153, 270, 379, 1600
BseGI GGATG 4 cut(s) 357, 392, 1068, 1111
BseLI CCNNNNNNNGG 2 cut(s) 144, 1402
BseMII CTCAG 7 cut(s) 468, 519, 819, 1362, 1423, 1607, 1629
BseNI ACTGG 2 cut(s) 477, 849
BseXI GCAGC 1 cut(s) 1235
BshFI GGCC 1 cut(s) 231
BshTI ACCGGT 1 cut(s) 869
BshVI ATCGAT 1 cut(s) 1328
BsiHKAI GWGCWC 1 cut(s) 1114
BsiHKCI CYCGRG 1 cut(s) 956
BsiSI CCGG 2 cut(s) 870, 1103
BslFI GGGAC 2 cut(s) 889, 957
BslI CCNNNNNNNGG 2 cut(s) 144, 1402
BsmAI GTCTC 5 cut(s) 970, 1061, 1397, 1558, 1618
BsmBI CGTCTC 2 cut(s) 1061, 1397
BsmFI GGGAC 2 cut(s) 889, 957
BsnI GGCC 1 cut(s) 231
BsoBI CYCGRG 1 cut(s) 956
Bsp1286I GDGCHC 1 cut(s) 1114
Bsp143I GATC 5 cut(s) 247, 509, 1234, 1405, 1477
Bsp19I CCATGG 2 cut(s) 153, 379
BspACI CCGC 1 cut(s) 540
BspANI GGCC 1 cut(s) 231
BspCNI CTCAG 7 cut(s) 467, 518, 818, 1363, 1422, 1606, 1628
BspDI ATCGAT 1 cut(s) 1328
BspHI TCATGA 1 cut(s) 852
BspLI GGNNCC 4 cut(s) 52, 276, 1649, 1703
BspMAI CTGCAG 1 cut(s) 1225
BspPI GGATC 3 cut(s) 517, 1413, 1485
BsrFI RCCGGY 1 cut(s) 869
BsrI ACTGG 2 cut(s) 477, 849
BssAI RCCGGY 1 cut(s) 869
BssECI CCNNGG 4 cut(s) 153, 270, 379, 1600
BssMI GATC 5 cut(s) 247, 509, 1234, 1405, 1477
BssNI GRCGYC 1 cut(s) 1054
BssT1I CCWWGG 4 cut(s) 153, 270, 379, 1600
Bst2UI CCWGG 3 cut(s) 327, 1421, 1724
Bst4CI ACNGT 3 cut(s) 464, 1063, 1299
BstACI GRCGYC 1 cut(s) 1054
BstAPI GCANNNNNTGC 1 cut(s) 563
BstC8I GCNNGC 2 cut(s) 79, 656
BstDSI CCRYGG 2 cut(s) 153, 379
BstF5I GGATG 4 cut(s) 357, 392, 1068, 1111
BstKTI GATC 5 cut(s) 250, 512, 1237, 1408, 1480
BstMAI GTCTC 5 cut(s) 970, 1061, 1397, 1558, 1618
BstMBI GATC 5 cut(s) 247, 509, 1234, 1405, 1477
BstMWI GCNNNNNNNGC 5 cut(s) 563, 1118, 1271, 1347, 1356
BstNI CCWGG 3 cut(s) 327, 1421, 1724
BstNSI RCATGY 2 cut(s) 81, 658
BstPAI GACNNNNGTC 1 cut(s) 1016
BstSCI CCNGG 3 cut(s) 325, 1419, 1722
BstSFI CTRYAG 2 cut(s) 1048, 1221
BstV1I GCAGC 1 cut(s) 1235
BstV2I GAAGAC 1 cut(s) 120
BstX2I RGATCY 2 cut(s) 1405, 1477
BstXI CCANNNNNNTGG 1 cut(s) 1427
BstYI RGATCY 2 cut(s) 1405, 1477
Bsu15I ATCGAT 1 cut(s) 1328
BsuRI GGCC 1 cut(s) 231
BsuTUI ATCGAT 1 cut(s) 1328
BtgI CCRYGG 2 cut(s) 153, 379
BtsCI GGATG 4 cut(s) 357, 392, 1068, 1111
BtsIMutI CAGTG 4 cut(s) 655, 1360, 1417, 1491
Cac8I GCNNGC 2 cut(s) 79, 656
CciI TCATGA 1 cut(s) 852
Cfr10I RCCGGY 1 cut(s) 869
Cfr13I GGNCC 1 cut(s) 275
ClaI ATCGAT 1 cut(s) 1328
CsiI ACCWGGT 2 cut(s) 325, 1419
Csp6I GTAC 4 cut(s) 96, 287, 1064, 1398
CspAI ACCGGT 1 cut(s) 869
CspCI CAANNNNNGTGG 2 cut(s) 723, 758
CviAII CATG 9 cut(s) 74, 78, 154, 380, 655, 853, 897, 1117, 1238
CviQI GTAC 4 cut(s) 96, 287, 1064, 1398
DpnI GATC 5 cut(s) 249, 511, 1236, 1407, 1479
DpnII GATC 5 cut(s) 247, 509, 1234, 1405, 1477
Eco130I CCWWGG 4 cut(s) 153, 270, 379, 1600
Eco147I AGGCCT 1 cut(s) 231
Eco32I GATATC 1 cut(s) 526
Eco47I GGWCC 1 cut(s) 275
Eco57I CTGAAG 1 cut(s) 1656
Eco88I CYCGRG 1 cut(s) 956
EcoO109I RGGNCCY 1 cut(s) 275
EcoRI GAATTC 1 cut(s) 597
EcoRII CCWGG 3 cut(s) 325, 1419, 1722
EcoRV GATATC 1 cut(s) 526
EcoT14I CCWWGG 4 cut(s) 153, 270, 379, 1600
EcoT22I ATGCAT 2 cut(s) 79, 1736
ErhI CCWWGG 4 cut(s) 153, 270, 379, 1600
Esp3I CGTCTC 2 cut(s) 1061, 1397
FaeI CATG 9 cut(s) 77, 81, 157, 383, 658, 856, 900, 1120, 1241
FaqI GGGAC 2 cut(s) 889, 957
FatI CATG 9 cut(s) 73, 77, 153, 379, 654, 852, 896, 1116, 1237
FblI GTMKAC 1 cut(s) 1051
Fnu4HI GCNGC 2 cut(s) 5, 1224
FokI GGATG 4 cut(s) 364, 379, 1055, 1118
Fsp4HI GCNGC 2 cut(s) 5, 1224
FspBI CTAG 6 cut(s) 47, 366, 545, 719, 776, 938
GluI GCNGC 2 cut(s) 5, 1224
GsuI CTGGAG 4 cut(s) 336, 805, 1521, 1745
HaeIII GGCC 1 cut(s) 231
HapII CCGG 2 cut(s) 870, 1103
Hin1I GRCGYC 1 cut(s) 1054
Hin1II CATG 9 cut(s) 77, 81, 157, 383, 658, 856, 900, 1120, 1241
HincII GTYRAC 1 cut(s) 833
HindII GTYRAC 1 cut(s) 833
HindIII AAGCTT 2 cut(s) 925, 1638
HinfI GANTC 8 cut(s) 258, 424, 429, 772, 780, 1134, 1489, 1631
HpaII CCGG 2 cut(s) 870, 1103
HphI GGTGA 3 cut(s) 5, 757, 1103
Hpy166II GTNNAC 3 cut(s) 833, 842, 1052
Hpy188I TCNGA 3 cut(s) 351, 1213, 1636
Hpy8I GTNNAC 3 cut(s) 833, 842, 1052
HpyCH4III ACNGT 3 cut(s) 464, 1063, 1299
HpyCH4IV ACGT 2 cut(s) 1054, 1390
HpyF10VI GCNNNNNNNGC 5 cut(s) 563, 1118, 1271, 1347, 1356
HpySE526I ACGT 2 cut(s) 1054, 1390
Hsp92I GRCGYC 1 cut(s) 1054
Hsp92II CATG 9 cut(s) 77, 81, 157, 383, 658, 856, 900, 1120, 1241
Kzo9I GATC 5 cut(s) 247, 509, 1234, 1405, 1477
LmnI GCTCC 3 cut(s) 56, 705, 1602
Lsp1109I GCAGC 1 cut(s) 1235
LweI GCATC 3 cut(s) 1273, 1359, 1721
MabI ACCWGGT 2 cut(s) 325, 1419
MaeI CTAG 6 cut(s) 47, 366, 545, 719, 776, 938
MaeII ACGT 2 cut(s) 1054, 1390
MaeIII GTNAC 5 cut(s) 202, 436, 491, 590, 1018
MalI GATC 5 cut(s) 249, 511, 1236, 1407, 1479
MboI GATC 5 cut(s) 247, 509, 1234, 1405, 1477
MboII GAAGA 8 cut(s) 26, 120, 394, 533, 560, 1106, 1252, 1506
MflI RGATCY 2 cut(s) 1405, 1477
MhlI GDGCHC 1 cut(s) 1114
MlyI GAGTC 1 cut(s) 418
MmeI TCCRAC 3 cut(s) 430, 735, 1455
Mph1103I ATGCAT 2 cut(s) 79, 1736
MroXI GAANNNNTTC 1 cut(s) 463
MseI TTAA 7 cut(s) 140, 303, 603, 638, 813, 929, 1548
MslI CAYNNNNRTG 1 cut(s) 72
MspI CCGG 2 cut(s) 870, 1103
MspR9I CCNGG 3 cut(s) 327, 1421, 1724
MvaI CCWGG 3 cut(s) 327, 1421, 1724
MwoI GCNNNNNNNGC 5 cut(s) 563, 1118, 1271, 1347, 1356
NcoI CCATGG 2 cut(s) 153, 379
NdeII GATC 5 cut(s) 247, 509, 1234, 1405, 1477
NlaIII CATG 9 cut(s) 77, 81, 157, 383, 658, 856, 900, 1120, 1241
NlaIV GGNNCC 4 cut(s) 52, 276, 1649, 1703
NmuCI GTSAC 2 cut(s) 436, 1018
NsiI ATGCAT 2 cut(s) 79, 1736
NspI RCATGY 2 cut(s) 81, 658
PaeI GCATGC 2 cut(s) 81, 658
PagI TCATGA 1 cut(s) 852
PceI AGGCCT 1 cut(s) 231
PdmI GAANNNNTTC 1 cut(s) 463
PfeI GAWTC 7 cut(s) 258, 429, 772, 780, 1134, 1489, 1631
PflFI GACNNNGTC 1 cut(s) 828
PinAI ACCGGT 1 cut(s) 869
PkrI GCNGC 2 cut(s) 6, 1225
PleI GAGTC 1 cut(s) 418
PpsI GAGTC 1 cut(s) 418
PpuMI RGGWCCY 1 cut(s) 275
PshAI GACNNNNGTC 1 cut(s) 1016
Psp5II RGGWCCY 1 cut(s) 275
Psp6I CCWGG 3 cut(s) 325, 1419, 1722
PspGI CCWGG 3 cut(s) 325, 1419, 1722
PspN4I GGNNCC 4 cut(s) 52, 276, 1649, 1703
PspPI GGNCC 1 cut(s) 275
PspPPI RGGWCCY 1 cut(s) 275
PstI CTGCAG 1 cut(s) 1225
PsuI RGATCY 2 cut(s) 1405, 1477
PsyI GACNNNGTC 1 cut(s) 828
RsaI GTAC 4 cut(s) 97, 288, 1065, 1399
RsaNI GTAC 4 cut(s) 96, 287, 1064, 1398
RseI CAYNNNNRTG 1 cut(s) 72
SaqAI TTAA 7 cut(s) 140, 303, 603, 638, 813, 929, 1548
SatI GCNGC 2 cut(s) 5, 1224
Sau3AI GATC 5 cut(s) 247, 509, 1234, 1405, 1477
Sau96I GGNCC 1 cut(s) 275
SchI GAGTC 1 cut(s) 418
ScrFI CCNGG 3 cut(s) 327, 1421, 1724
SduI GDGCHC 1 cut(s) 1114
SexAI ACCWGGT 2 cut(s) 325, 1419
SfaNI GCATC 3 cut(s) 1273, 1359, 1721
SfcI CTRYAG 2 cut(s) 1048, 1221
SinI GGWCC 1 cut(s) 275
SmiMI CAYNNNNRTG 1 cut(s) 72
SmlI CTYRAG 3 cut(s) 85, 281, 1227
SmoI CTYRAG 3 cut(s) 85, 281, 1227
SphI GCATGC 2 cut(s) 81, 658
SseBI AGGCCT 1 cut(s) 231
SsiI CCGC 1 cut(s) 540
SspI AATATT 1 cut(s) 346
SspMI CTAG 6 cut(s) 47, 366, 545, 719, 776, 938
StuI AGGCCT 1 cut(s) 231
StyD4I CCNGG 3 cut(s) 325, 1419, 1722
StyI CCWWGG 4 cut(s) 153, 270, 379, 1600
TaaI ACNGT 3 cut(s) 464, 1063, 1299
TaiI ACGT 2 cut(s) 1057, 1393
TaqI TCGA 4 cut(s) 199, 427, 919, 1328
TfiI GAWTC 7 cut(s) 258, 429, 772, 780, 1134, 1489, 1631
Tru1I TTAA 7 cut(s) 140, 303, 603, 638, 813, 929, 1548
Tru9I TTAA 7 cut(s) 140, 303, 603, 638, 813, 929, 1548
TscAI CASTG 4 cut(s) 655, 1360, 1417, 1491
TseFI GTSAC 2 cut(s) 436, 1018
TseI GCWGC 2 cut(s) 4, 1223
Tsp45I GTSAC 2 cut(s) 436, 1018
TspDTI ATGAA 6 cut(s) 62, 250, 695, 841, 1046, 1535
TspGWI ACGGA 2 cut(s) 473, 1385
TspRI CASTG 4 cut(s) 655, 1360, 1417, 1491
Tth111I GACNNNGTC 1 cut(s) 828
VpaK11BI GGWCC 1 cut(s) 275
XapI RAATTY 5 cut(s) 418, 597, 1173, 1462, 1743
XceI RCATGY 2 cut(s) 81, 658
XmiI GTMKAC 1 cut(s) 1051
XmnI GAANNNNTTC 1 cut(s) 463
XspI CTAG 6 cut(s) 47, 366, 545, 719, 776, 938
ZraI GACGTC 1 cut(s) 1055
Zsp2I ATGCAT 2 cut(s) 79, 1736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.