Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0006193

Physical Location & Seq

Genomic Coordinates Reverse (-)

13429459 .. 13437116

Gene Structure 7658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1134600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

ATGTGTAAAGAACACCAAACTGCAAAAACCCTCTTTGTCTCTGCAGCTGCTTCTCTACCTTATCTTCTTCTTCTTCCCCAGACTCCCCCAACAATGCCGGACCAAGACTCGCCCAAACCCACTGAATCCCAACTCAAGAACCAAAAATCCGACTCGAATTCCGACCCAGATGAGGAAAAAGCAAATCTCTCCTCCGACGACGACTCAGAGTCTGAGTACGACTCCGACGAGTCGTCCGAGTACGAAGGAGATGGAGGTGGTGGCGGCCCAGATGGCGGTGAAGCGGATGATTCACTCAAGTACATCCGACCCGGTGAAGATATTCCCGAGGCCGATAATACACCCGAGGTGAACATGAAGCTCTTCTCTCAGGTGCTCCAGGGGAAGAGAGTGAGGAGAAGGCAGGACGAGGAGGACGAAAGCTATGTCTTTTATGAGGACCTTTTCGATTTTCCAGAGGACCCGGAGAATTGGAGGGAGGAGGACTTGAAGGAGTTATGGGGGGACGCTCCGTTGGAGATGACCAACCCCGGGTGGGACCCGGTTTGGGCTGATGAGGAAGAGTGGGACATTGTCCGGGAGGAGATTAAGGCCGGCAAGGACCCTCCAATTGCCCCGTTTTATGTCCCGTACCGGAAGCCTTACCCAGCTATACCGGATGACCACTATGACATTTCCAATCCCAAGGCTGTGATTGAGGAAATGGATAGGATTGAGGAGTTTCTCAAATGGGTTAGCTATGTTTTCGAAGATGGAAGCACGTATGAGGGCACTGTCTGGGATGACTTGGCTCATGGGAAAGGAGTCTACGTTGCCGAGCAGGGACTTGTCAGGTATGAAGGTGAATGGCTTCAAAATAACATGGAGGGTCATGGGGTTGTTGAAGTTGATATACCTGATATAGAGCCTATTCCAGGTTCCAAGCTTGAAGCGCAAATGCGTGCTGAAGGGCACATAATATCAAGAGATTATATGACCCCAGAAGATAAGAAATGGCTGGAGATGGATATTGAAGACAGCATTCTTCTAGCAGGTGGGCAGACTGAAGTACCGTTTTATGAAAGTGAAGAGTGGATCAGACAATTTGGGAGGAAACCGGAGAAAGGTCGATATCGTTATGCTGGTCAGTGGAAGCATGCCAGAATGCATGGATGTGGGGTATATGAAATCAACGAGCGTACCATTTATGGCCGGTTCTATTTTGGGGAGTTAGTGGAGGATGATACTGGTTGTGATGAGGATGTATCAGCGATGCACGCGGGTATTGCAGAAGTGGCTGCTGCTAAGGCTCGGATGTTTGTGAACAAGCCTGATGGAATGGTTAGGGAGGAAAGGGGACCTTATGGTGATCCTCAACATCCCTACTTTTATGAAGATGATGATGTTTGGATGGCACCAGGCTTCATAAACCAATTTTATGAAGTACCTGATTATTGGAAAACGTATGTGCATGAGGTCGATGAAGAAAGGGAAATGTGGTTGAACTCCTTCTATAAAGCTCCACTGAGGATACCCATGCCTGCTGAGCTTGAATACTGGTGGTCAAAGGATGAAACTCCAGAATTTGTTCTTCTTAACAAGGAACCAGAGCCTGATCCTGAAGACCCATCGAAGCTTGTATATACTGAAGATCCCATAATCCTACACACACGAACTGGACGGTTAATCAACTATATCAATGATGAAAAATATGGGGTGCGCTTGTTTTGGCAGCCGCTTCTGAAAGATGGGGAAGAGGTGGACCCAAAAAAGGTGGAGTTCCTTCCCCTTGGTTTTGATGATTTCTATGGAAGGAATGTTGGTGTGAAGAAGAAAAATTTATGGATGCGTGTGGTATCAGCAGTGGAAAATGCATGCAAGCCCGTTCTTGAAAAAGTAGAGAAATGGACTGAAGAGAAGAGGAAAGCCAGTGAGGTGAAGTTGAAGTTGATTGAAAAAGAACTTGAACTTGTAGAGGCTGAGTTGTGCCTGGAAGAGGTAATTGAGGATATGGATGAGGAGTTAAAGATGAGAGAGAAAGAGGAAGAGAAGGCGGAAATGAGTTTGCAGGAGGAAGAAGATACTTCTGCTGCATCGGCAAAGCAAGATGAGAAACCCTTAGTTGAAGAGGATGAAGAGGACGAGGACGAGGAAGAGGAAGAGGAAGATGAGGATGATGTTGCGCCATCAAGTTTTGGGTCTGCAACTGCAGATCAAGATGCAACTAAAAATGGCCAGAAGGGAAACAAACCTGGGAAATCTCCATTTTCTTCATCTTCATTGGCATTTGCTTCATGTAGCCTTGTCTCTGGAGTTCCATCCAGGCTACAACAAGCATTTTTGTCCTGGAAAAAGAGTAGAGCAATGCTGAACACAACTATTCCCTCGTGCAATGACGCCTCTAGTTGCCCCTCAGCTGATTCAGTCAGTTTCCCTCCGGTGGTTGGTCGAAAAGTAAACTTGAAAGCCACTAGTCAAAGACAGTTGAACTGCGAAGCCAAAATCTCCTCAAATGGGAGGCTATCTCGGATGCGGCCCATATCTCAATTATGCTCATCTCATTCAACATCTATGGATACCAGAATAAGCTCAAAAGAAATGAGATCAAGAAACTGTAGTTGGCCGCATGTAGCGCAAGGGAGGGAACCATACAGCGTTTTGTCGCTTCACACCCCTGTGCGTTGTTTGAACCCGTATGAAGAAACTATGCATGGCGAGCCGCCGCTATCTCCCTTGTTAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009658 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042170 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0061458 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

908

Amino Acids

103.63

Weight (kDa)

4.48

Isoelectric Point (pI)

56.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22640 AT5G22640 AT5G22640
fragaria_vesca	FvH4_3g29910 FvH4_3g29910 FvH4_3g29910
malus_domestica	MD03G1134600.v1.1 MD11G1157100.v1.1
prunus_persica	Prupe.6G118900_v2.0.a1 Prupe.6G118900_v2.0.a1
pyrus_communis	pycom03g09060 pycom11g12730
rosa_chinensis	RchiOBHm_Chr5g0055251
rosa_laevigata	RLG00000034978
rosa_multiflora	Rmu_co8251283.1_g000001 Rmu_co8349015.1_g000001 Rmu_sc0003110.1_g000015 Rmu_sc0013362.1_g000001 Rmu_sc0014992.1_g000001
rosa_roxburghii	Rroxscaffold_1G00025050
rosa_rugosa	Rorug05G0292100 Rorug05G0292200
rosa_samantha	Rh5AG361900 Rh5BG373500 Rh5CG395200 Rh5DG386700
rosa_wichuraiana	Rw5G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1022
Acc36I	ACCTGC	1 cut(s)	1022
AccB1I	GGYRCC	1 cut(s)	1393
AccI	GTMKAC	1 cut(s)	807
AccII	CGCG	1 cut(s)	1259
AclWI	GGATC	4 cut(s)	1082, 1343, 1589, 1625
AcoI	YGGCCR	3 cut(s)	1189, 2212, 2600
AcsI	RAATTY	3 cut(s)	157, 1562, 1816
AcuI	CTGAAG	5 cut(s)	966, 1065, 1620, 1647, 1911
AcyI	GRCGYC	1 cut(s)	2376
AfaI	GTAC	7 cut(s)	218, 242, 302, 632, 1050, 1180, 1425
AhdI	GACNNNNNGTC	2 cut(s)	208, 232
AhlI	ACTAGT	1 cut(s)	2450
AjnI	CCWGG	7 cut(s)	378, 913, 1396, 1968, 2230, 2300, 2324
AjuI	GAANNNNNNNTTGG	2 cut(s)	2581, 2613
AleI	CACNNNNGTG	1 cut(s)	2654
AloI	GAACNNNNNNTCC	2 cut(s)	131, 163
Alw21I	GWGCWC	1 cut(s)	378
Alw26I	GTCTC	2 cut(s)	43, 2290
AlwI	GGATC	4 cut(s)	1082, 1343, 1589, 1625
AlwNI	CAGNNNCTG	2 cut(s)	212, 1592
Ama87I	CYCGRG	3 cut(s)	326, 344, 530
AoxI	GGCC	7 cut(s)	265, 330, 591, 1189, 2212, 2513, 2600
ApeKI	GCWGC	6 cut(s)	44, 47, 1277, 1280, 1711, 2069
ApoI	RAATTY	3 cut(s)	157, 1562, 1816
ArsI	GACNNNNNNTTYG	2 cut(s)	411, 443
Asp700I	GAANNNNTTC	5 cut(s)	321, 362, 849, 1487, 1566
AspLEI	GCGC	4 cut(s)	934, 1701, 2164, 2614
AspS9I	GGNCC	9 cut(s)	100, 266, 439, 460, 538, 601, 1337, 1741, 2514
AsuC2I	CCSGG	6 cut(s)	312, 464, 531, 532, 542, 578
AsuHPI	GGTGA	6 cut(s)	290, 326, 361, 854, 1358, 1927
AsuII	TTCGAA	1 cut(s)	747
AvaI	CYCGRG	3 cut(s)	326, 344, 530
AvaII	GGWCC	7 cut(s)	100, 439, 460, 538, 601, 1337, 1741
BaeGI	GKGCMC	2 cut(s)	773, 954
BaeI	ACNNNNGTAYC	4 cut(s)	1032, 1065, 1162, 1195
BalI	TGGCCA	1 cut(s)	2214
BanI	GGYRCC	1 cut(s)	1393
BarI	GAAGNNNNNNTAC	2 cut(s)	876, 908
BauI	CACGAG	1 cut(s)	2365
BbsI	GAAGAC	2 cut(s)	1020, 1608
Bbv12I	GWGCWC	1 cut(s)	378
BbvCI	CCTCAGC	1 cut(s)	2392
BbvI	GCAGC	6 cut(s)	34, 56, 1264, 1267, 1723, 2056
BciT130I	CCWGG	7 cut(s)	380, 915, 1398, 1970, 2232, 2302, 2326
BciVI	GTATCC	2 cut(s)	1503, 2548
BcnI	CCSGG	6 cut(s)	312, 464, 531, 532, 542, 578
BcoDI	GTCTC	2 cut(s)	43, 2290
BcuI	ACTAGT	1 cut(s)	2450
BfaI	CTAG	3 cut(s)	1028, 2382, 2451
BfmI	CTRYAG	3 cut(s)	42, 2187, 2593
BfuAI	ACCTGC	1 cut(s)	1022
BfuI	GTATCC	2 cut(s)	1503, 2548
BglI	GCCNNNNNGGC	1 cut(s)	273
BlpI	GCTNAGC	1 cut(s)	1524
Bme18I	GGWCC	7 cut(s)	100, 439, 460, 538, 601, 1337, 1741
BmeRI	GACNNNNNGTC	2 cut(s)	208, 232
BmeT110I	CYCGRG	3 cut(s)	326, 344, 530
BmgT120I	GGNCC	9 cut(s)	100, 266, 439, 460, 538, 601, 1337, 1741, 2514
BmsI	GCATC	5 cut(s)	1242, 1815, 2081, 2188, 2499
BpiI	GAAGAC	2 cut(s)	1020, 1608
BplI	GAGNNNNNCTC	4 cut(s)	206, 238, 2488, 2520
BpmI	CTGGAG	4 cut(s)	362, 1019, 1542, 2310
Bpu10I	CCTNAGC	2 cut(s)	1284, 2392
Bpu1102I	GCTNAGC	1 cut(s)	1524
Bpu14I	TTCGAA	1 cut(s)	747
BpuEI	CTTGAG	2 cut(s)	119, 281
BpuMI	CCSGG	6 cut(s)	312, 464, 531, 532, 542, 578
BsaAI	YACGTR	1 cut(s)	762
BsaHI	GRCGYC	1 cut(s)	2376
BsaJI	CCNNGG	8 cut(s)	327, 345, 379, 529, 530, 684, 1768, 2231
BsaWI	WCCGGW	4 cut(s)	633, 655, 1096, 2416
BsaXI	ACNNNNNCTCC	2 cut(s)	795, 825
Bse118I	RCCGGY	2 cut(s)	593, 1191
Bse1I	ACTGG	4 cut(s)	1231, 1541, 1660, 1908
Bse3DI	GCAATG	2 cut(s)	2349, 2377
BseBI	CCWGG	7 cut(s)	380, 915, 1398, 1970, 2232, 2302, 2326
BseDI	CCNNGG	8 cut(s)	327, 345, 379, 529, 530, 684, 1768, 2231
BseMI	GCAATG	2 cut(s)	2349, 2377
BseMII	CTCAG	7 cut(s)	204, 219, 383, 1496, 1515, 1950, 2406
BseNI	ACTGG	4 cut(s)	1231, 1541, 1660, 1908
BseRI	GAGGAG	8 cut(s)	181, 409, 425, 494, 596, 731, 2012, 2476
BseSI	GKGCMC	2 cut(s)	773, 954
BseXI	GCAGC	6 cut(s)	34, 56, 1264, 1267, 1723, 2056
BseYI	CCCAGC	1 cut(s)	646
Bsh1236I	CGCG	1 cut(s)	1259
BshFI	GGCC	7 cut(s)	267, 332, 593, 1191, 2214, 2515, 2602
BshNI	GGYRCC	1 cut(s)	1393
BsiHKAI	GWGCWC	1 cut(s)	378
BsiHKCI	CYCGRG	3 cut(s)	326, 344, 530
BslFI	GGGAC	6 cut(s)	518, 551, 581, 611, 837, 1350
BsmAI	GTCTC	2 cut(s)	43, 2290
BsmFI	GGGAC	6 cut(s)	518, 551, 581, 611, 837, 1350
BsmI	GAATGC	2 cut(s)	1020, 1149
BsnI	GGCC	7 cut(s)	267, 332, 593, 1191, 2214, 2515, 2602
BsoBI	CYCGRG	3 cut(s)	326, 344, 530
Bsp119I	TTCGAA	1 cut(s)	747
Bsp1286I	GDGCHC	3 cut(s)	378, 773, 954
Bsp143I	GATC	6 cut(s)	1074, 1348, 1594, 1630, 2191, 2582
Bsp1720I	GCTNAGC	1 cut(s)	1524
BspANI	GGCC	7 cut(s)	267, 332, 593, 1191, 2214, 2515, 2602
BspCNI	CTCAG	7 cut(s)	205, 218, 382, 1497, 1516, 1951, 2405
BspFNI	CGCG	1 cut(s)	1259
BspMAI	CTGCAG	2 cut(s)	46, 2191
BspMI	ACCTGC	1 cut(s)	1022
BspPI	GGATC	4 cut(s)	1082, 1343, 1589, 1625
BspQI	GCTCTTC	1 cut(s)	368
BspT104I	TTCGAA	1 cut(s)	747
BspT107I	GGYRCC	1 cut(s)	1393
BsrDI	GCAATG	2 cut(s)	2349, 2377
BsrFI	RCCGGY	2 cut(s)	593, 1191
BsrI	ACTGG	4 cut(s)	1231, 1541, 1660, 1908
BssAI	RCCGGY	2 cut(s)	593, 1191
BssECI	CCNNGG	8 cut(s)	327, 345, 379, 529, 530, 684, 1768, 2231
BssMI	GATC	6 cut(s)	1074, 1348, 1594, 1630, 2191, 2582
BssNI	GRCGYC	1 cut(s)	2376
BssSI	CACGAG	1 cut(s)	2365
BssT1I	CCWWGG	2 cut(s)	684, 1768
Bst2BI	CACGAG	1 cut(s)	2365
Bst2UI	CCWGG	7 cut(s)	380, 915, 1398, 1970, 2232, 2302, 2326
Bst4CI	ACNGT	5 cut(s)	775, 1053, 1662, 2463, 2594
BstACI	GRCGYC	1 cut(s)	2376
BstBAI	YACGTR	1 cut(s)	762
BstBI	TTCGAA	1 cut(s)	747
BstC8I	GCNNGC	8 cut(s)	595, 942, 1137, 1257, 1521, 1855, 1859, 2696
BstDEI	CTNAG	9 cut(s)	205, 213, 369, 1284, 1505, 1524, 1959, 2098, 2392
BstENI	CCTNNNNNAGG	2 cut(s)	912, 1973
BstFNI	CGCG	1 cut(s)	1259
BstHHI	GCGC	4 cut(s)	934, 1701, 2164, 2614
BstKTI	GATC	6 cut(s)	1077, 1351, 1597, 1633, 2194, 2585
BstMAI	GTCTC	2 cut(s)	43, 2290
BstMBI	GATC	6 cut(s)	1074, 1348, 1594, 1630, 2191, 2582
BstNI	CCWGG	7 cut(s)	380, 915, 1398, 1970, 2232, 2302, 2326
BstNSI	RCATGY	3 cut(s)	1139, 1857, 2609
BstSFI	CTRYAG	3 cut(s)	42, 2187, 2593
BstSLI	GKGCMC	2 cut(s)	773, 954
BstUI	CGCG	1 cut(s)	1259
BstV1I	GCAGC	6 cut(s)	34, 56, 1264, 1267, 1723, 2056
BstV2I	GAAGAC	2 cut(s)	1020, 1608
BstX2I	RGATCY	1 cut(s)	1630
BstYI	RGATCY	1 cut(s)	1630
BsuI	GTATCC	2 cut(s)	1503, 2548
BsuRI	GGCC	7 cut(s)	267, 332, 593, 1191, 2214, 2515, 2602
BtgZI	GCGATG	1 cut(s)	1265
BtsI	GCAGTG	1 cut(s)	1848
BtsIMutI	CAGTG	6 cut(s)	120, 771, 1133, 1502, 1848, 1915
BveI	ACCTGC	1 cut(s)	1022
Cac8I	GCNNGC	8 cut(s)	595, 942, 1137, 1257, 1521, 1855, 1859, 2696
CaiI	CAGNNNCTG	2 cut(s)	212, 1592
CfoI	GCGC	4 cut(s)	934, 1701, 2164, 2614
Cfr10I	RCCGGY	2 cut(s)	593, 1191
Cfr13I	GGNCC	9 cut(s)	100, 266, 439, 460, 538, 601, 1337, 1741, 2514
Cfr9I	CCCGGG	1 cut(s)	530
CseI	GACGC	2 cut(s)	515, 2384
Csp6I	GTAC	7 cut(s)	217, 241, 301, 631, 1049, 1179, 1424
CspCI	CAANNNNNGTGG	2 cut(s)	1734, 1769
CviQI	GTAC	7 cut(s)	217, 241, 301, 631, 1049, 1179, 1424
DdeI	CTNAG	9 cut(s)	205, 213, 369, 1284, 1505, 1524, 1959, 2098, 2392
DpnI	GATC	6 cut(s)	1076, 1350, 1596, 1632, 2193, 2584
DpnII	GATC	6 cut(s)	1074, 1348, 1594, 1630, 2191, 2582
DriI	GACNNNNNGTC	2 cut(s)	208, 232
EaeI	YGGCCR	3 cut(s)	1189, 2212, 2600
Eam1105I	GACNNNNNGTC	2 cut(s)	208, 232
EciI	GGCGGA	1 cut(s)	2048
Eco130I	CCWWGG	2 cut(s)	684, 1768
Eco32I	GATATC	1 cut(s)	1112
Eco47I	GGWCC	7 cut(s)	100, 439, 460, 538, 601, 1337, 1741
Eco57I	CTGAAG	5 cut(s)	966, 1065, 1620, 1647, 1911
Eco88I	CYCGRG	3 cut(s)	326, 344, 530
EcoNI	CCTNNNNNAGG	2 cut(s)	912, 1973
EcoO109I	RGGNCCY	5 cut(s)	439, 460, 538, 601, 1337
EcoRI	GAATTC	1 cut(s)	157
EcoRII	CCWGG	7 cut(s)	378, 913, 1396, 1968, 2230, 2300, 2324
EcoRV	GATATC	1 cut(s)	1112
EcoT14I	CCWWGG	2 cut(s)	684, 1768
EcoT22I	ATGCAT	3 cut(s)	1149, 1855, 2691
ErhI	CCWWGG	2 cut(s)	684, 1768
FalI	AAGNNNNNCTT	2 cut(s)	1324, 1356
FaqI	GGGAC	6 cut(s)	518, 551, 581, 611, 837, 1350
FauI	CCCGC	1 cut(s)	1252
FblI	GTMKAC	1 cut(s)	807
FspBI	CTAG	3 cut(s)	1028, 2382, 2451
GlaI	GCGC	4 cut(s)	933, 1700, 2163, 2613
GsaI	CCCAGC	1 cut(s)	650
GsuI	CTGGAG	4 cut(s)	362, 1019, 1542, 2310
HaeIII	GGCC	7 cut(s)	267, 332, 593, 1191, 2214, 2515, 2602
HgaI	GACGC	2 cut(s)	515, 2384
HhaI	GCGC	4 cut(s)	934, 1701, 2164, 2614
Hin1I	GRCGYC	1 cut(s)	2376
Hin6I	GCGC	4 cut(s)	932, 1699, 2162, 2612
HinP1I	GCGC	4 cut(s)	932, 1699, 2162, 2612
HincII	GTYRAC	1 cut(s)	2718
HindII	GTYRAC	1 cut(s)	2718
HindIII	AAGCTT	2 cut(s)	923, 1613
HpaI	GTTAAC	1 cut(s)	2718
HphI	GGTGA	6 cut(s)	290, 326, 361, 854, 1358, 1927
Hpy166II	GTNNAC	6 cut(s)	352, 808, 1303, 1741, 2437, 2718
Hpy8I	GTNNAC	6 cut(s)	352, 808, 1303, 1741, 2437, 2718
Hpy99I	CGWCG	3 cut(s)	200, 203, 230
HpyCH4III	ACNGT	5 cut(s)	775, 1053, 1662, 2463, 2594
HpyCH4IV	ACGT	3 cut(s)	761, 810, 1442
HpyF3I	CTNAG	9 cut(s)	205, 213, 369, 1284, 1505, 1524, 1959, 2098, 2392
HpySE526I	ACGT	3 cut(s)	761, 810, 1442
Hsp92I	GRCGYC	1 cut(s)	2376
HspAI	GCGC	4 cut(s)	932, 1699, 2162, 2612
KflI	GGGWCCC	1 cut(s)	538
KroI	GCCGGC	1 cut(s)	593
KroNI	GCCGGC	1 cut(s)	595
KspAI	GTTAAC	1 cut(s)	2718
Kzo9I	GATC	6 cut(s)	1074, 1348, 1594, 1630, 2191, 2582
LguI	GCTCTTC	1 cut(s)	368
LmnI	GCTCC	3 cut(s)	381, 514, 1504
Lsp1109I	GCAGC	6 cut(s)	34, 56, 1264, 1267, 1723, 2056
LweI	GCATC	5 cut(s)	1242, 1815, 2081, 2188, 2499
MaeI	CTAG	3 cut(s)	1028, 2382, 2451
MaeII	ACGT	3 cut(s)	761, 810, 1442
MalI	GATC	6 cut(s)	1076, 1350, 1596, 1632, 2193, 2584
MboI	GATC	6 cut(s)	1074, 1348, 1594, 1630, 2191, 2582
MfeI	CAATTG	1 cut(s)	609
MflI	RGATCY	1 cut(s)	1630
MhlI	GDGCHC	3 cut(s)	378, 773, 954
MlsI	TGGCCA	1 cut(s)	2214
MluCI	AATT	9 cut(s)	157, 469, 609, 1082, 1412, 1562, 1816, 1980, 2525
MluNI	TGGCCA	1 cut(s)	2214
MlyI	GAGTC	8 cut(s)	76, 101, 146, 197, 215, 218, 239, 813
MmeI	TCCRAC	6 cut(s)	174, 186, 219, 249, 331, 495
Mox20I	TGGCCA	1 cut(s)	2214
Mph1103I	ATGCAT	3 cut(s)	1149, 1855, 2691
MroNI	GCCGGC	1 cut(s)	593
MroXI	GAANNNNTTC	5 cut(s)	321, 362, 849, 1487, 1566
MscI	TGGCCA	1 cut(s)	2214
MseI	TTAA	5 cut(s)	588, 1575, 1664, 2003, 2717
MslI	CAYNNNNRTG	2 cut(s)	1152, 2654
Msp20I	TGGCCA	1 cut(s)	2214
MspA1I	CMGCKG	2 cut(s)	47, 2396
MunI	CAATTG	1 cut(s)	609
Mva1269I	GAATGC	2 cut(s)	1020, 1149
MvaI	CCWGG	7 cut(s)	380, 915, 1398, 1970, 2232, 2302, 2326
MvnI	CGCG	1 cut(s)	1259
NaeI	GCCGGC	1 cut(s)	595
NciI	CCSGG	6 cut(s)	312, 464, 531, 532, 542, 578
NdeII	GATC	6 cut(s)	1074, 1348, 1594, 1630, 2191, 2582
NgoMIV	GCCGGC	1 cut(s)	593
NmeAIII	GCCGAG	1 cut(s)	841
NsiI	ATGCAT	3 cut(s)	1149, 1855, 2691
NspI	RCATGY	3 cut(s)	1139, 1857, 2609
NspV	TTCGAA	1 cut(s)	747
OliI	CACNNNNGTG	1 cut(s)	2654
PaeI	GCATGC	2 cut(s)	1139, 1857
PaqCI	CACCTGC	1 cut(s)	1022
PciSI	GCTCTTC	1 cut(s)	368
PcsI	WCGNNNNNNNCGW	3 cut(s)	225, 234, 414
PctI	GAATGC	2 cut(s)	1020, 1149
PdiI	GCCGGC	1 cut(s)	595
PdmI	GAANNNNTTC	5 cut(s)	321, 362, 849, 1487, 1566
PfeI	GAWTC	3 cut(s)	125, 290, 2399
PflFI	GACNNNGTC	1 cut(s)	572
PfoI	TCCNGGA	2 cut(s)	576, 2324
PleI	GAGTC	8 cut(s)	76, 101, 146, 197, 215, 217, 238, 812
PpsI	GAGTC	8 cut(s)	76, 101, 146, 197, 215, 217, 238, 812
Ppu21I	YACGTR	1 cut(s)	762
PpuMI	RGGWCCY	5 cut(s)	439, 460, 538, 601, 1337
Psp5II	RGGWCCY	5 cut(s)	439, 460, 538, 601, 1337
Psp6I	CCWGG	7 cut(s)	378, 913, 1396, 1968, 2230, 2300, 2324
PspFI	CCCAGC	1 cut(s)	646
PspGI	CCWGG	7 cut(s)	378, 913, 1396, 1968, 2230, 2300, 2324
PspPI	GGNCC	9 cut(s)	100, 266, 439, 460, 538, 601, 1337, 1741, 2514
PspPPI	RGGWCCY	5 cut(s)	439, 460, 538, 601, 1337
PstI	CTGCAG	2 cut(s)	46, 2191
PstNI	CAGNNNCTG	2 cut(s)	212, 1592
PsuI	RGATCY	1 cut(s)	1630
PsyI	GACNNNGTC	1 cut(s)	572
PvuII	CAGCTG	2 cut(s)	47, 2396
RsaI	GTAC	7 cut(s)	218, 242, 302, 632, 1050, 1180, 1425
RsaNI	GTAC	7 cut(s)	217, 241, 301, 631, 1049, 1179, 1424
RseI	CAYNNNNRTG	2 cut(s)	1152, 2654
SapI	GCTCTTC	1 cut(s)	368
SaqAI	TTAA	5 cut(s)	588, 1575, 1664, 2003, 2717
Sau3AI	GATC	6 cut(s)	1074, 1348, 1594, 1630, 2191, 2582
Sau96I	GGNCC	9 cut(s)	100, 266, 439, 460, 538, 601, 1337, 1741, 2514
SchI	GAGTC	8 cut(s)	76, 101, 146, 197, 215, 218, 239, 813
SduI	GDGCHC	3 cut(s)	378, 773, 954
SfaNI	GCATC	5 cut(s)	1242, 1815, 2081, 2188, 2499
SfcI	CTRYAG	3 cut(s)	42, 2187, 2593
SfuI	TTCGAA	1 cut(s)	747
SinI	GGWCC	7 cut(s)	100, 439, 460, 538, 601, 1337, 1741
SmaI	CCCGGG	1 cut(s)	532
SmiMI	CAYNNNNRTG	2 cut(s)	1152, 2654
SmlI	CTYRAG	2 cut(s)	134, 296
SmoI	CTYRAG	2 cut(s)	134, 296
SpeI	ACTAGT	1 cut(s)	2450
SphI	GCATGC	2 cut(s)	1139, 1857
Sse9I	AATT	9 cut(s)	157, 469, 609, 1082, 1412, 1562, 1816, 1980, 2525
SspMI	CTAG	3 cut(s)	1028, 2382, 2451
StyI	CCWWGG	2 cut(s)	684, 1768
TaaI	ACNGT	5 cut(s)	775, 1053, 1662, 2463, 2594
TaiI	ACGT	3 cut(s)	764, 813, 1445
TaqI	TCGA	7 cut(s)	155, 447, 747, 1108, 1458, 1610, 2428
TasI	AATT	9 cut(s)	157, 469, 609, 1082, 1412, 1562, 1816, 1980, 2525
TatI	WGTACW	1 cut(s)	300
TauI	GCSGC	6 cut(s)	267, 1717, 2515, 2605, 2701, 2704
TfiI	GAWTC	3 cut(s)	125, 290, 2399
Tru1I	TTAA	5 cut(s)	588, 1575, 1664, 2003, 2717
Tru9I	TTAA	5 cut(s)	588, 1575, 1664, 2003, 2717
TscAI	CASTG	6 cut(s)	127, 778, 1133, 1509, 1848, 1915
TseI	GCWGC	6 cut(s)	44, 47, 1277, 1280, 1711, 2069
TspGWI	ACGGA	1 cut(s)	501
TspMI	CCCGGG	1 cut(s)	530
TspRI	CASTG	6 cut(s)	127, 778, 1133, 1509, 1848, 1915
Tth111I	GACNNNGTC	1 cut(s)	572
VpaK11BI	GGWCC	7 cut(s)	100, 439, 460, 538, 601, 1337, 1741
XagI	CCTNNNNNAGG	2 cut(s)	912, 1973
XapI	RAATTY	3 cut(s)	157, 1562, 1816
XceI	RCATGY	3 cut(s)	1139, 1857, 2609
XmaI	CCCGGG	1 cut(s)	530
XmiI	GTMKAC	1 cut(s)	807
XmnI	GAANNNNTTC	5 cut(s)	321, 362, 849, 1487, 1566
XspI	CTAG	3 cut(s)	1028, 2382, 2451
Zsp2I	ATGCAT	3 cut(s)	1149, 1855, 2691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.