Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0006193

Physical Location & Seq

Genomic Coordinates Reverse (-)

58170877 .. 58179164

Gene Structure 8288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034978

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2601 bp

ATGCCAGACCAAGACTCCCAAAACCCCACTGAATCCCAGCTCACCGTCCAAGAACCCGACCCGGATGGCCTCTCCTCCTCCGACTCCGGGCCCGACTACGATTCCGACGAGTCCTCCGTCTACGAAGGCGAGGGCGGTAACGGCGGTAATGGTGAAGTGGACGAAGCGCTCAATTTACTCCGGCCCGGCGAGGACATACCGGAGGACGAGAACACTCCGGAGGTGAATGTGAAGCTGTTCAATCAGGTGTTACAGGGGAAGAGAGTGAGGAGGAGGCAGGAGGAGGAGGACAGGGGGTATGTGTTTTACGAGGACCTGTTTGATTTCCCGGAGGACCCAGAGAAATGGCGGGAGGAGGACTTGAAGGAGCTCTGGGGTGATGCGCCCTTGGATATGACCAAACCCGGTTGGGACCCGGTTTGGGCTGATGAGGAGGAGTGGGAGATTGTTAAGGATGAGATTAAGGCCGGCAATGACCCGCCCATTGCTCCCTTTTATGTTCCCTACCGGAAGCCTTATCCGGCCATACCTGAAGATCATTATGACATTTCCAATCCCAAGGCTGTGATTGAAGAGTTGGATAGGATTGAGGAGTTTCTCAGATGGGTCAGCTATGTTTTCCCCGACGGCAGCTCGTATGAGGGCACCGTGTGGGATGACTTGGCTCATGGCAAAGGAGTCTACGTTGCTGAGCAGGGACTCGTCAGGTATGAAGGTGAATGGCTTCAAAACAACATGGAGGGTCATGGGGTTGTTGAAGTTGACATACCTGACATAGAGCCTATTCCAGGTTCCAAGCTTGAAGCACAGATGCGTGCTGAAGGGCACATAATATCAAGAGATTATATGACCCCGGAAGACAAAGAATGGTTGGAGATGGATATTCAAGACAGCATTGATCTAGCAGGGGGGCGCTCTGAAATTCCTTTTTATGAAAAAGATGAATGGATCAGACATTTTGGGAGGAAACCCGAGAAAGGTCGATATCGCTATGCCGGTCAGTGGAAACATGCCAGAATGCATGGATGCGGAGTATATGAAGTCAACGAGCGTACCATATATGGGAGGTTCTACTTTGGCGAGCTACTGGAGGATGATACTGGTTGTGATGAGGATGTATCAGCGCTGCATGCGGGTATTGCAGAAGTGGCTGCTGCTAAGGCTCGGATGTTTGTGAACAAGCCTGATGGAATGGTTAGGGAAGAGAGGGGCCCGTATAGTGATCCTCAACATCCTTATTTCTATGAAGATGAAGATGTTTGGATGGCACCAGGCTTCATAAACCAATTCTATGAAGTCCCTGATTACTGGAAAACATATGTGCATGAGGTCGATGAGGAAAGGGAAATGTGGTTGAACTCCTTCTATAAAGCTCCACTGAGAATACCTATGCCTTCTGAGCTTGAATACTGGTGGTCAAAGGAGGAGACTCCAGAATTTATTGTTGTTAACAAGGAACCAGAGCCTGATCCTGAAGACCCATCAAAGCTTATATATACTGAAGATCCACTTATCCTTCACACACGAACTGGACGGTTAATCAACTATATCGAAGATGAAAAACATGGGGTTCGCCTATTTTGGCAGCCGCCTCTCAAAGATGGGGAAGAGGTGGACCCAGAAAAGGCGGAGCTCCTTCCGCTTGGTTATGACGAGTTCTATGGACAAAACATTGGTGACAAGAGACAAAACTTTTTTATGCGACTTATATCAGCAGTGGAAAATACATGCAAGCCTGTTTTTGATAAACTAGAGAAATGGACTGAAGAGAAGAGGAAAGCAAGTGAGATGAAGATGAAATTGATTGAAAAAGAACTTGAACTGATAGAGGCTGAACTGTGCCTGGAAGAGGTAATTGAGGATATGGATGAGGAGTTGAAGATGAGAGAGAAAGAGGAGGAGAAGAATGTGGAAACGGTCTCGCCGGATGAAGAAGATACTTCTCCATTGGCTAACCAAGATGAGAAATCAATTGAAGAGGATGAAGAGGAAGAGGGCGAGGAAGAGGAAGAGGAAGATGAAGATGAAGATGATGCTGCGCCGTCAAGTTTTGGGTCTGTAAGAGGAGATCAGGATGGTACCAAAAATGGCCAGAAGGGTAACAAACCTGGGCGATCTCCATTTTCCACATCCTCATTGGCATTCGCTTCAAGTAGCCTCGTCTCTGGGATTCCATCCAGGCTGCAACAGTCGTTTTTAGCATGGAAAAATAGTAAAGCAATACCAAAGACAGCTACTTCTTCATGCAATGAAGCCTCTTGTCGCAACTTGAAAACAGTTGATTCAGTGAGTTTCCCTCCGTTGGTTGTCCCAAAAGTAAACTTGAAAGCCCTAAAGCAAAGACACTTGAACTTCCAAGCCAAAATCTCCTCAAATAGGAGGCTATCTCAGTTGCGGCCTTCATCTCAAATAAGCTCACATCACTCAGCTTCTATGAATACCAGAATAAGCCCAGGAGAAATGAGATTGAAAAACAATAGTTGGCTGCATGCATCACCAGAGAGGGAGTCGGACAGTATATTGTCTTTGCACACACCATGGTATCATTTGGAGCCAAATGAAGAAACCATACGTGGTGAGCCACTTCCTCTCCTTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009658 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042170 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0061458 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

867

Amino Acids

99.67

Weight (kDa)

4.48

Isoelectric Point (pI)

59.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22640 AT5G22640 AT5G22640
fragaria_vesca	FvH4_3g29910 FvH4_3g29910 FvH4_3g29910
malus_domestica	MD03G1134600.v1.1 MD11G1157100.v1.1
prunus_persica	Prupe.6G118900_v2.0.a1 Prupe.6G118900_v2.0.a1
pyrus_communis	pycom03g09060 pycom11g12730
rosa_chinensis	RchiOBHm_Chr5g0055251
rosa_laevigata	RLG00000034978
rosa_multiflora	Rmu_co8251283.1_g000001 Rmu_co8349015.1_g000001 Rmu_sc0003110.1_g000015 Rmu_sc0013362.1_g000001 Rmu_sc0014992.1_g000001
rosa_roxburghii	Rroxscaffold_1G00025050
rosa_rugosa	Rorug05G0292100 Rorug05G0292200
rosa_samantha	Rh5AG361900 Rh5BG373500 Rh5CG395200 Rh5DG386700
rosa_wichuraiana	Rw5G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2078
AccB1I	GGYRCC	3 cut(s)	644, 1267, 2078
AccI	GTMKAC	2 cut(s)	120, 681
AccIII	TCCGGA	1 cut(s)	217
AclWI	GGATC	4 cut(s)	956, 1217, 1463, 1499
AcoI	YGGCCR	2 cut(s)	522, 2089
AcsI	RAATTY	2 cut(s)	921, 1436
AcuI	CTGAAG	5 cut(s)	552, 840, 1494, 1521, 1785
AdeI	CACNNNGTG	1 cut(s)	651
AfaI	GTAC	2 cut(s)	1054, 2080
AfeI	AGCGCT	2 cut(s)	168, 1125
AjnI	CCWGG	6 cut(s)	787, 1270, 1842, 2107, 2177, 2452
Alw21I	GWGCWC	2 cut(s)	372, 1635
Alw26I	GTCTC	4 cut(s)	1421, 1678, 1924, 2167
AlwI	GGATC	4 cut(s)	956, 1217, 1463, 1499
AlwNI	CAGNNNCTG	1 cut(s)	1466
Ama87I	CYCGRG	1 cut(s)	971
Aor13HI	TCCGGA	1 cut(s)	217
Aor51HI	AGCGCT	2 cut(s)	168, 1125
AoxI	GGCC	8 cut(s)	67, 89, 182, 465, 522, 1210, 2089, 2396
ApaI	GGGCCC	2 cut(s)	93, 1214
ApeKI	GCWGC	8 cut(s)	630, 1126, 1151, 1154, 1585, 2036, 2182, 2485
ApoI	RAATTY	2 cut(s)	921, 1436
Asp700I	GAANNNNTTC	3 cut(s)	236, 723, 1361
Asp718I	GGTACC	1 cut(s)	2078
AspLEI	GCGC	5 cut(s)	169, 385, 915, 1126, 2041
AspS9I	GGNCC	9 cut(s)	89, 90, 183, 313, 334, 412, 1210, 1211, 1615
AsuC2I	CCSGG	7 cut(s)	62, 88, 186, 329, 405, 416, 854
AsuHPI	GGTGA	8 cut(s)	34, 164, 235, 389, 728, 1688, 2487, 2588
AvaI	CYCGRG	1 cut(s)	971
AvaII	GGWCC	4 cut(s)	313, 334, 412, 1615
BaeGI	GKGCMC	4 cut(s)	93, 647, 828, 1214
BaeI	ACNNNNGTAYC	4 cut(s)	1036, 1069, 2525, 2558
BalI	TGGCCA	1 cut(s)	2091
BanI	GGYRCC	3 cut(s)	644, 1267, 2078
BanII	GRGCYC	4 cut(s)	93, 372, 1214, 1635
BarI	GAAGNNNNNNTAC	4 cut(s)	750, 782, 2553, 2585
BbsI	GAAGAC	2 cut(s)	864, 1482
Bbv12I	GWGCWC	2 cut(s)	372, 1635
BbvI	GCAGC	8 cut(s)	642, 1113, 1138, 1141, 1597, 2023, 2169, 2472
BccI	CCATC	9 cut(s)	59, 597, 871, 1181, 1258, 1489, 1595, 2069, 2182
BceAI	ACGGC	3 cut(s)	157, 643, 2026
BciT130I	CCWGG	6 cut(s)	789, 1272, 1844, 2109, 2179, 2454
BcnI	CCSGG	7 cut(s)	62, 88, 186, 329, 405, 416, 854
BcoDI	GTCTC	4 cut(s)	1421, 1678, 1924, 2167
BfaI	CTAG	2 cut(s)	902, 1751
BfoI	RGCGCY	3 cut(s)	170, 916, 1127
BlpI	GCTNAGC	1 cut(s)	690
Bme18I	GGWCC	4 cut(s)	313, 334, 412, 1615
BmeT110I	CYCGRG	1 cut(s)	971
BmgT120I	GGNCC	9 cut(s)	89, 90, 183, 313, 334, 412, 1210, 1211, 1615
BmsI	GCATC	5 cut(s)	370, 801, 1016, 2023, 2501
BpiI	GAAGAC	2 cut(s)	864, 1482
BplI	GAGNNNNNCTC	4 cut(s)	2281, 2313, 2371, 2403
BpmI	CTGGAG	2 cut(s)	1109, 1416
Bpu10I	CCTNAGC	1 cut(s)	1158
Bpu1102I	GCTNAGC	1 cut(s)	690
BpuMI	CCSGG	7 cut(s)	62, 88, 186, 329, 405, 416, 854
BsaAI	YACGTR	1 cut(s)	2573
BsaI	GGTCTC	1 cut(s)	1924
BsaJI	CCNNGG	6 cut(s)	387, 558, 852, 2108, 2452, 2537
BsaWI	WCCGGW	3 cut(s)	199, 217, 507
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 98, 128, 669, 699, 2574
Bse118I	RCCGGY	2 cut(s)	467, 995
Bse1I	ACTGG	5 cut(s)	1092, 1105, 1313, 1415, 1534
Bse3DI	GCAATG	3 cut(s)	478, 483, 2254
BseAI	TCCGGA	1 cut(s)	217
BseBI	CCWGG	6 cut(s)	789, 1272, 1844, 2109, 2179, 2454
BseDI	CCNNGG	6 cut(s)	387, 558, 852, 2108, 2452, 2537
BseMI	GCAATG	3 cut(s)	478, 483, 2254
BseMII	CTCAG	6 cut(s)	613, 681, 1370, 1389, 2402, 2439
BseNI	ACTGG	5 cut(s)	1092, 1105, 1313, 1415, 1534
BseSI	GKGCMC	4 cut(s)	93, 647, 828, 1214
BseXI	GCAGC	8 cut(s)	642, 1113, 1138, 1141, 1597, 2023, 2169, 2472
BseYI	CCCAGC	1 cut(s)	36
BshFI	GGCC	8 cut(s)	69, 91, 184, 467, 524, 1212, 2091, 2398
BshNI	GGYRCC	3 cut(s)	644, 1267, 2078
BsiHKAI	GWGCWC	2 cut(s)	372, 1635
BsiHKCI	CYCGRG	1 cut(s)	971
BslFI	GGGAC	4 cut(s)	425, 711, 1283, 2294
BsmAI	GTCTC	4 cut(s)	1421, 1678, 1924, 2167
BsmBI	CGTCTC	1 cut(s)	2167
BsmFI	GGGAC	4 cut(s)	425, 711, 1283, 2294
BsmI	GAATGC	2 cut(s)	1023, 2141
BsnI	GGCC	8 cut(s)	69, 91, 184, 467, 524, 1212, 2091, 2398
Bso31I	GGTCTC	1 cut(s)	1924
BsoBI	CYCGRG	1 cut(s)	971
Bsp120I	GGGCCC	2 cut(s)	89, 1210
Bsp1286I	GDGCHC	6 cut(s)	93, 372, 647, 828, 1214, 1635
Bsp13I	TCCGGA	1 cut(s)	217
Bsp143I	GATC	8 cut(s)	535, 898, 948, 1222, 1468, 1504, 2068, 2114
Bsp1720I	GCTNAGC	1 cut(s)	690
Bsp19I	CCATGG	1 cut(s)	2537
BspANI	GGCC	8 cut(s)	69, 91, 184, 467, 524, 1212, 2091, 2398
BspCNI	CTCAG	6 cut(s)	612, 682, 1371, 1390, 2401, 2438
BspEI	TCCGGA	1 cut(s)	217
BspPI	GGATC	4 cut(s)	956, 1217, 1463, 1499
BspT107I	GGYRCC	3 cut(s)	644, 1267, 2078
BspTNI	GGTCTC	1 cut(s)	1924
BsrDI	GCAATG	3 cut(s)	478, 483, 2254
BsrFI	RCCGGY	2 cut(s)	467, 995
BsrI	ACTGG	5 cut(s)	1092, 1105, 1313, 1415, 1534
BssAI	RCCGGY	2 cut(s)	467, 995
BssECI	CCNNGG	6 cut(s)	387, 558, 852, 2108, 2452, 2537
BssMI	GATC	8 cut(s)	535, 898, 948, 1222, 1468, 1504, 2068, 2114
BssT1I	CCWWGG	3 cut(s)	387, 558, 2537
Bst2UI	CCWGG	6 cut(s)	789, 1272, 1844, 2109, 2179, 2454
Bst4CI	ACNGT	8 cut(s)	46, 649, 1536, 1839, 1918, 2190, 2278, 2516
BstBAI	YACGTR	1 cut(s)	2573
BstC8I	GCNNGC	6 cut(s)	469, 816, 1082, 1131, 1733, 2490
BstDEI	CTNAG	7 cut(s)	599, 690, 1158, 1379, 1398, 2388, 2425
BstDSI	CCRYGG	1 cut(s)	2537
BstENI	CCTNNNNNAGG	3 cut(s)	786, 1847, 2374
BstH2I	RGCGCY	3 cut(s)	170, 916, 1127
BstHHI	GCGC	5 cut(s)	169, 385, 915, 1126, 2041
BstKTI	GATC	8 cut(s)	538, 901, 951, 1225, 1471, 1507, 2071, 2117
BstMAI	GTCTC	4 cut(s)	1421, 1678, 1924, 2167
BstMBI	GATC	8 cut(s)	535, 898, 948, 1222, 1468, 1504, 2068, 2114
BstMWI	GCNNNNNNNGC	7 cut(s)	141, 1130, 1139, 1148, 1160, 1399, 1639
BstNI	CCWGG	6 cut(s)	789, 1272, 1844, 2109, 2179, 2454
BstNSI	RCATGY	4 cut(s)	1013, 1133, 1731, 2492
BstSLI	GKGCMC	4 cut(s)	93, 647, 828, 1214
BstV1I	GCAGC	8 cut(s)	642, 1113, 1138, 1141, 1597, 2023, 2169, 2472
BstV2I	GAAGAC	2 cut(s)	864, 1482
BstX2I	RGATCY	1 cut(s)	1504
BstXI	CCANNNNNNTGG	1 cut(s)	345
BstYI	RGATCY	1 cut(s)	1504
BsuRI	GGCC	8 cut(s)	69, 91, 184, 467, 524, 1212, 2091, 2398
BtgI	CCRYGG	1 cut(s)	2537
BtsI	GCAGTG	1 cut(s)	1722
BtsIMutI	CAGTG	5 cut(s)	27, 1007, 1376, 1722, 2292
Cac8I	GCNNGC	6 cut(s)	469, 816, 1082, 1131, 1733, 2490
CaiI	CAGNNNCTG	1 cut(s)	1466
CfoI	GCGC	5 cut(s)	169, 385, 915, 1126, 2041
Cfr10I	RCCGGY	2 cut(s)	467, 995
Cfr13I	GGNCC	9 cut(s)	89, 90, 183, 313, 334, 412, 1210, 1211, 1615
Csp6I	GTAC	2 cut(s)	1053, 2079
CviQI	GTAC	2 cut(s)	1053, 2079
DdeI	CTNAG	7 cut(s)	599, 690, 1158, 1379, 1398, 2388, 2425
DpnI	GATC	8 cut(s)	537, 900, 950, 1224, 1470, 1506, 2070, 2116
DpnII	GATC	8 cut(s)	535, 898, 948, 1222, 1468, 1504, 2068, 2114
DraIII	CACNNNGTG	1 cut(s)	651
EaeI	YGGCCR	2 cut(s)	522, 2089
EciI	GGCGGA	1 cut(s)	1643
Ecl136II	GAGCTC	2 cut(s)	370, 1633
Eco130I	CCWWGG	3 cut(s)	387, 558, 2537
Eco24I	GRGCYC	4 cut(s)	93, 372, 1214, 1635
Eco31I	GGTCTC	1 cut(s)	1924
Eco32I	GATATC	1 cut(s)	986
Eco47I	GGWCC	4 cut(s)	313, 334, 412, 1615
Eco47III	AGCGCT	2 cut(s)	168, 1125
Eco53kI	GAGCTC	2 cut(s)	370, 1633
Eco57I	CTGAAG	5 cut(s)	552, 840, 1494, 1521, 1785
Eco88I	CYCGRG	1 cut(s)	971
EcoICRI	GAGCTC	2 cut(s)	370, 1633
EcoNI	CCTNNNNNAGG	3 cut(s)	786, 1847, 2374
EcoO109I	RGGNCCY	4 cut(s)	313, 334, 412, 1210
EcoRII	CCWGG	6 cut(s)	787, 1270, 1842, 2107, 2177, 2452
EcoRV	GATATC	1 cut(s)	986
EcoT14I	CCWWGG	3 cut(s)	387, 558, 2537
EcoT22I	ATGCAT	2 cut(s)	1023, 2494
EcoT38I	GRGCYC	4 cut(s)	93, 372, 1214, 1635
ErhI	CCWWGG	3 cut(s)	387, 558, 2537
Esp3I	CGTCTC	1 cut(s)	2167
FalI	AAGNNNNNCTT	2 cut(s)	1494, 1526
FaqI	GGGAC	4 cut(s)	425, 711, 1283, 2294
FauI	CCCGC	3 cut(s)	342, 486, 1126
FauNDI	CATATG	1 cut(s)	1318
FblI	GTMKAC	2 cut(s)	120, 681
FriOI	GRGCYC	4 cut(s)	93, 372, 1214, 1635
FspBI	CTAG	2 cut(s)	902, 1751
GlaI	GCGC	5 cut(s)	168, 384, 914, 1125, 2040
GsaI	CCCAGC	1 cut(s)	40
GsuI	CTGGAG	2 cut(s)	1109, 1416
HaeII	RGCGCY	3 cut(s)	170, 916, 1127
HaeIII	GGCC	8 cut(s)	69, 91, 184, 467, 524, 1212, 2091, 2398
HhaI	GCGC	5 cut(s)	169, 385, 915, 1126, 2041
Hin6I	GCGC	5 cut(s)	167, 383, 913, 1124, 2039
HinP1I	GCGC	5 cut(s)	167, 383, 913, 1124, 2039
HincII	GTYRAC	3 cut(s)	763, 1045, 1450
HindII	GTYRAC	3 cut(s)	763, 1045, 1450
HindIII	AAGCTT	2 cut(s)	797, 1487
HpaI	GTTAAC	1 cut(s)	1450
HphI	GGTGA	8 cut(s)	34, 164, 235, 389, 728, 1688, 2487, 2588
Hpy166II	GTNNAC	9 cut(s)	121, 160, 682, 763, 1045, 1177, 1450, 1615, 2320
Hpy188I	TCNGA	8 cut(s)	82, 106, 602, 919, 953, 1167, 1399, 2512
Hpy188III	TCNNGA	6 cut(s)	218, 837, 887, 1433, 1472, 2072
Hpy8I	GTNNAC	9 cut(s)	121, 160, 682, 763, 1045, 1177, 1450, 1615, 2320
Hpy99I	CGWCG	2 cut(s)	110, 629
HpyCH4III	ACNGT	8 cut(s)	46, 649, 1536, 1839, 1918, 2190, 2278, 2516
HpyCH4IV	ACGT	2 cut(s)	684, 2572
HpyF10VI	GCNNNNNNNGC	7 cut(s)	141, 1130, 1139, 1148, 1160, 1399, 1639
HpyF3I	CTNAG	7 cut(s)	599, 690, 1158, 1379, 1398, 2388, 2425
HpySE526I	ACGT	2 cut(s)	684, 2572
HspAI	GCGC	5 cut(s)	167, 383, 913, 1124, 2039
KflI	GGGWCCC	1 cut(s)	412
Kpn2I	TCCGGA	1 cut(s)	217
KpnI	GGTACC	1 cut(s)	2082
KroI	GCCGGC	1 cut(s)	467
KroNI	GCCGGC	1 cut(s)	469
KspAI	GTTAAC	1 cut(s)	1450
Kzo9I	GATC	8 cut(s)	535, 898, 948, 1222, 1468, 1504, 2068, 2114
LmnI	GCTCC	6 cut(s)	367, 493, 1378, 1630, 1638, 2551
Lsp1109I	GCAGC	8 cut(s)	642, 1113, 1138, 1141, 1597, 2023, 2169, 2472
LweI	GCATC	5 cut(s)	370, 801, 1016, 2023, 2501
MaeI	CTAG	2 cut(s)	902, 1751
MaeII	ACGT	2 cut(s)	684, 2572
MaeIII	GTNAC	4 cut(s)	137, 249, 1676, 2099
MalI	GATC	8 cut(s)	537, 900, 950, 1224, 1470, 1506, 2070, 2116
MboI	GATC	8 cut(s)	535, 898, 948, 1222, 1468, 1504, 2068, 2114
MfeI	CAATTG	1 cut(s)	1971
MflI	RGATCY	1 cut(s)	1504
MhlI	GDGCHC	6 cut(s)	93, 372, 647, 828, 1214, 1635
MlsI	TGGCCA	1 cut(s)	2091
MluCI	AATT	7 cut(s)	172, 921, 1286, 1436, 1799, 1854, 1971
MluNI	TGGCCA	1 cut(s)	2091
MlyI	GAGTC	7 cut(s)	8, 77, 119, 687, 693, 1423, 2516
MmeI	TCCRAC	5 cut(s)	105, 129, 558, 852, 2490
Mox20I	TGGCCA	1 cut(s)	2091
Mph1103I	ATGCAT	2 cut(s)	1023, 2494
MroI	TCCGGA	1 cut(s)	217
MroNI	GCCGGC	1 cut(s)	467
MroXI	GAANNNNTTC	3 cut(s)	236, 723, 1361
MscI	TGGCCA	1 cut(s)	2091
MseI	TTAA	5 cut(s)	450, 462, 1449, 1538, 2599
Msp20I	TGGCCA	1 cut(s)	2091
MunI	CAATTG	1 cut(s)	1971
Mva1269I	GAATGC	2 cut(s)	1023, 2141
MvaI	CCWGG	6 cut(s)	789, 1272, 1844, 2109, 2179, 2454
MwoI	GCNNNNNNNGC	7 cut(s)	141, 1130, 1139, 1148, 1160, 1399, 1639
NaeI	GCCGGC	1 cut(s)	469
NciI	CCSGG	7 cut(s)	62, 88, 186, 329, 405, 416, 854
NcoI	CCATGG	1 cut(s)	2537
NdeI	CATATG	1 cut(s)	1318
NdeII	GATC	8 cut(s)	535, 898, 948, 1222, 1468, 1504, 2068, 2114
NgoMIV	GCCGGC	1 cut(s)	467
NmuCI	GTSAC	1 cut(s)	1676
NsiI	ATGCAT	2 cut(s)	1023, 2494
NspI	RCATGY	4 cut(s)	1013, 1133, 1731, 2492
PaeI	GCATGC	2 cut(s)	1133, 2492
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 114
PctI	GAATGC	2 cut(s)	1023, 2141
PdiI	GCCGGC	1 cut(s)	469
PdmI	GAANNNNTTC	3 cut(s)	236, 723, 1361
PfeI	GAWTC	4 cut(s)	32, 101, 2170, 2282
PfoI	TCCNGGA	1 cut(s)	327
PleI	GAGTC	7 cut(s)	8, 77, 118, 686, 693, 1423, 2515
PpsI	GAGTC	7 cut(s)	8, 77, 118, 686, 693, 1423, 2515
Ppu21I	YACGTR	1 cut(s)	2573
PpuMI	RGGWCCY	3 cut(s)	313, 334, 412
Psp124BI	GAGCTC	2 cut(s)	372, 1635
Psp5II	RGGWCCY	3 cut(s)	313, 334, 412
Psp6I	CCWGG	6 cut(s)	787, 1270, 1842, 2107, 2177, 2452
PspFI	CCCAGC	1 cut(s)	36
PspGI	CCWGG	6 cut(s)	787, 1270, 1842, 2107, 2177, 2452
PspOMI	GGGCCC	2 cut(s)	89, 1210
PspPI	GGNCC	9 cut(s)	89, 90, 183, 313, 334, 412, 1210, 1211, 1615
PspPPI	RGGWCCY	3 cut(s)	313, 334, 412
PstNI	CAGNNNCTG	1 cut(s)	1466
PsuI	RGATCY	1 cut(s)	1504
RsaI	GTAC	2 cut(s)	1054, 2080
RsaNI	GTAC	2 cut(s)	1053, 2079
SacI	GAGCTC	2 cut(s)	372, 1635
SaqAI	TTAA	5 cut(s)	450, 462, 1449, 1538, 2599
Sau3AI	GATC	8 cut(s)	535, 898, 948, 1222, 1468, 1504, 2068, 2114
Sau96I	GGNCC	9 cut(s)	89, 90, 183, 313, 334, 412, 1210, 1211, 1615
SchI	GAGTC	7 cut(s)	8, 77, 119, 687, 693, 1423, 2516
SduI	GDGCHC	6 cut(s)	93, 372, 647, 828, 1214, 1635
SfaNI	GCATC	5 cut(s)	370, 801, 1016, 2023, 2501
SinI	GGWCC	4 cut(s)	313, 334, 412, 1615
SphI	GCATGC	2 cut(s)	1133, 2492
Sse9I	AATT	7 cut(s)	172, 921, 1286, 1436, 1799, 1854, 1971
SspMI	CTAG	2 cut(s)	902, 1751
SstI	GAGCTC	2 cut(s)	372, 1635
StyI	CCWWGG	3 cut(s)	387, 558, 2537
TaaI	ACNGT	8 cut(s)	46, 649, 1536, 1839, 1918, 2190, 2278, 2516
TaiI	ACGT	2 cut(s)	687, 2575
TaqI	TCGA	3 cut(s)	982, 1332, 1551
TasI	AATT	7 cut(s)	172, 921, 1286, 1436, 1799, 1854, 1971
TauI	GCSGC	2 cut(s)	1591, 2398
TfiI	GAWTC	4 cut(s)	32, 101, 2170, 2282
Tru1I	TTAA	5 cut(s)	450, 462, 1449, 1538, 2599
Tru9I	TTAA	5 cut(s)	450, 462, 1449, 1538, 2599
TscAI	CASTG	5 cut(s)	34, 1007, 1383, 1722, 2292
TseFI	GTSAC	1 cut(s)	1676
TseI	GCWGC	8 cut(s)	630, 1126, 1151, 1154, 1585, 2036, 2182, 2485
Tsp45I	GTSAC	1 cut(s)	1676
TspGWI	ACGGA	2 cut(s)	106, 2289
TspRI	CASTG	5 cut(s)	34, 1007, 1383, 1722, 2292
VpaK11BI	GGWCC	4 cut(s)	313, 334, 412, 1615
XagI	CCTNNNNNAGG	3 cut(s)	786, 1847, 2374
XapI	RAATTY	2 cut(s)	921, 1436
XceI	RCATGY	4 cut(s)	1013, 1133, 1731, 2492
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2134
XmiI	GTMKAC	2 cut(s)	120, 681
XmnI	GAANNNNTTC	3 cut(s)	236, 723, 1361
XspI	CTAG	2 cut(s)	902, 1751
Zsp2I	ATGCAT	2 cut(s)	1023, 2494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.