Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0006193

Physical Location & Seq

Genomic Coordinates Reverse (-)

52180053 .. 52188691

Gene Structure 8639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG395200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGCCAGACCAAGACTCCCCAAACCCCACTGAATCCCAGCTCACCGCCCAAGAGCCCGACCCGGACGGCCTCTCCTCCTCCGACTCCGAGCCCGACTACGATTCCGACGAGTCCTCCGTCTACGAAGGCGAGGGCGGTAACGGTGAAGTCGACGAAGCGCTCAATTTACTCCGGCCCGGCGAGGACATACCGGAGGACGAGAACACTCCCGATGTGAATGTGAAGCTGTTCAATCAGGTGTTACAGGGGAAGAGAGTGAGGAGGAGGCAGGAGGAGGAGGACAGGGGGTATGTGTTTTACGAGGACCTGTTTGATTTCCCGGAGGACCCAGAGAAATGGCGGGAGGAGGACTTGAAGGAGCTCTGGGGTGATGCGCCCTTGGATATGACCAAACCCGGTTGGGACCCGGTTTGGGCTGATGAGGAGGAGTGGGAGATTGTTAAGGATGAGATTAAGGCCGGCAATGACCCGCCCATTGCTCCCTTTTATGTTCCCTACCGGAAGCCTTATCCGGCCATACCTGAAGATCATTATGACATTTCCAATCCCAAGGCTGTGATTGAAGAGTTGGATAGGATTGAGGAGTTTCTCAGATGGGTCAGCTATGTTTTCCCTGACGGCAGCTCGTATGAGGGCACCGTGTGGGATGACTTGGCTCATGGCAAAGGAGTCTACGTTGCTGAGCAGGGACTCGTCAGGTATGAAGGTGAATGGCTTCAAAACAACATGGAGGGTCATGGGGTTGTTGAAGTTGACATACCTGACATAGAGCCTATTCCAGGTTCCAAGCTTGAAGCACAGATGCGTGCTGAAGGGCACATAATATCAAGAGATTATATGACCCCGGAAGACAAAGAATGGTTGGAGATGGATATTCAAGACAGCATTGATCTAGCAGGGGGGCGGTCTGAAATTCCTTTTTATGAAAAAGATGAATGGATCAGACATTTTGGGAGGAAACCCGAGAAAGGTCGATATCGCTATGCAGGTCAGTGGAAACATGCCAGAATGCATGGATGCGGAGTATATGAAGTCAACGAGCGTACCATATATGGGAGGTTCTACTTTGGCGAGCTAGTGGAGGATGATACTGGTTGTGATGAGGATGTATCAGCGCTGCATGCGGGTATTGCAGAAGTGGCTGCTGCTAAGGCTCGGATGTTTGTGAACAAGCCTGATGGAATGGTTAGGGAAGAGAGGGGCCCGTATAGTGATCCTCAACATCCCTATTTCTATGAAGATGAAGATGTTTGGATGGCACCAGGCTTCATAAACCAATTCTATGAAGTCCCTGATTACTGGAAAACATATGTGCATGAGGTTGATGAGGAAAGGGAAATGTGGTTGAACTCCTTCTATAAAGCTCCACTGAGAATACCTATGCCTTCTGAGCTTGAATACTGGTGGTCAAAGGAGGAGACTCCAGAATTTATTGTTGTTAACAAGGAACCAGAGCCTGATCCTGAAGACCCATCAAAGCTTATATATACTGAAGATCCACTTATCCTTCACACACGAACTGGACGGTTAATCAACTATATCGAAGATGAAAAACATGGGGTTCGCCTATTTTGGCAGCCGCCTCTCAAAGATGGGGAAGAGGTGGACCCAGAAAAGGCGGAGCTCCTTCCGCTTGGTTATGACGAGTTCTATGGACAAAACATTGGTGACAAGAAACAAAACTTTTTGATGCGACTTATATCAGCAGTGGAAAATACGTGCAAGCCTGTTTTTGATAAACTAGAGAAATGGACTGAAGAGAAGAGGAAAGCAAGTGAGATGAAGATGAAATTGATTGAAAAAGAACTTGAACTGATAGAGGCTGAACTGTGCCTGGAAGAGGTAATTGAGGATATGGATGAGGAGTTGAAGATGAGAGAGAAAGAGGAGGAGAAGAATGTGGAAACGGTCTCGCCGGATGAAGAAGATACTTCTCCATTGGCTAACCAAGATGAGAAATCAATTGAAGAGGATGAAGAGGAAGAGGAAGAGGAAGATGAAGATGAAGATGATGCTGTGCCATCAAGTTTTGGGTCTGTAAGAGGAGATCAGGATGGTACCAAAAATGGCCAGAAGGGTAACAAACCTGGGCGATCTCCATTTTCCACATCCTCATTGGCATTCGCTTCAAGTAGCCTCGTCTCTGGGATTCCATCCAGGCTGCAACAGTCGTTTTTAGCATGGAAAAATAGTAAAGCAATACCAAAGACAGCTACTTCTTCATGCAATGAAGCCTCTTGTTGCAACTTGAAACAAGTTGATTCAGTGAGTTTCCCTCCGTTGGTTGTCCCAAAAGTAAACTTGAAAGCCCTAAAGCAAAGACACTTGAACTTCCAAGCCAAAATCTCCTCAAATAGGAGGCTATCTCAGTTGCGGCCTTCATCTCAAATAAGCTCACATCACTCAGCTTCTATGAACACCAGAATAAGCCCAGGAGAAATGAGATTGAAAAACAATAGTTGGCTGCATGCATCACCAGAGAGGGAGTCGGACAGTATATTGTCTTTGCACACACCATGGTATCATTTGGAGCCAAATGAAGAAACCATACGTGGTGAGCCACTTCCTCTCCTTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009658 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042170 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0061458 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

859

Amino Acids

98.93

Weight (kDa)

4.48

Isoelectric Point (pI)

59.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22640 AT5G22640 AT5G22640
fragaria_vesca	FvH4_3g29910 FvH4_3g29910 FvH4_3g29910
malus_domestica	MD03G1134600.v1.1 MD11G1157100.v1.1
prunus_persica	Prupe.6G118900_v2.0.a1 Prupe.6G118900_v2.0.a1
pyrus_communis	pycom03g09060 pycom11g12730
rosa_chinensis	RchiOBHm_Chr5g0055251
rosa_laevigata	RLG00000034978
rosa_multiflora	Rmu_co8251283.1_g000001 Rmu_co8349015.1_g000001 Rmu_sc0003110.1_g000015 Rmu_sc0013362.1_g000001 Rmu_sc0014992.1_g000001
rosa_roxburghii	Rroxscaffold_1G00025050
rosa_rugosa	Rorug05G0292100 Rorug05G0292200
rosa_samantha	Rh5AG361900 Rh5BG373500 Rh5CG395200 Rh5DG386700
rosa_wichuraiana	Rw5G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	977
Acc65I	GGTACC	1 cut(s)	2057
AccB1I	GGYRCC	3 cut(s)	635, 1258, 2057
AccI	GTMKAC	3 cut(s)	120, 150, 672
AclWI	GGATC	4 cut(s)	947, 1208, 1454, 1490
AcoI	YGGCCR	2 cut(s)	513, 2068
AcsI	RAATTY	2 cut(s)	912, 1427
AcuI	CTGAAG	5 cut(s)	543, 831, 1485, 1512, 1776
AdeI	CACNNNGTG	1 cut(s)	642
AfaI	GTAC	2 cut(s)	1045, 2059
AfeI	AGCGCT	2 cut(s)	159, 1116
AfiI	CCNNNNNNNGG	8 cut(s)	412, 779, 968, 1053, 1615, 1840, 2281, 2355
AjnI	CCWGG	6 cut(s)	778, 1261, 1833, 2086, 2156, 2431
Alw21I	GWGCWC	2 cut(s)	363, 1626
Alw26I	GTCTC	3 cut(s)	1412, 1915, 2146
AlwI	GGATC	4 cut(s)	947, 1208, 1454, 1490
AlwNI	CAGNNNCTG	1 cut(s)	1457
Ama87I	CYCGRG	1 cut(s)	962
Aor51HI	AGCGCT	2 cut(s)	159, 1116
AoxI	GGCC	7 cut(s)	67, 173, 456, 513, 1201, 2068, 2375
ApaI	GGGCCC	1 cut(s)	1205
ApeKI	GCWGC	7 cut(s)	621, 1117, 1142, 1145, 1576, 2161, 2464
ApoI	RAATTY	2 cut(s)	912, 1427
Asp700I	GAANNNNTTC	3 cut(s)	227, 714, 1352
Asp718I	GGTACC	1 cut(s)	2057
AspLEI	GCGC	3 cut(s)	160, 376, 1117
AspS9I	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
AsuC2I	CCSGG	6 cut(s)	62, 177, 320, 396, 407, 845
AsuHPI	GGTGA	7 cut(s)	34, 155, 380, 719, 1679, 2466, 2567
AvaI	CYCGRG	1 cut(s)	962
AvaII	GGWCC	4 cut(s)	304, 325, 403, 1606
BaeGI	GKGCMC	3 cut(s)	638, 819, 1205
BaeI	ACNNNNGTAYC	4 cut(s)	1027, 1060, 2504, 2537
BalI	TGGCCA	1 cut(s)	2070
BanI	GGYRCC	3 cut(s)	635, 1258, 2057
BanII	GRGCYC	5 cut(s)	57, 93, 363, 1205, 1626
BarI	GAAGNNNNNNTAC	4 cut(s)	741, 773, 2532, 2564
BbsI	GAAGAC	2 cut(s)	855, 1473
Bbv12I	GWGCWC	2 cut(s)	363, 1626
BbvI	GCAGC	7 cut(s)	633, 1104, 1129, 1132, 1588, 2148, 2451
BccI	CCATC	9 cut(s)	588, 862, 1172, 1249, 1480, 1586, 2029, 2048, 2161
BceAI	ACGGC	2 cut(s)	82, 634
BciT130I	CCWGG	6 cut(s)	780, 1263, 1835, 2088, 2158, 2433
BcnI	CCSGG	6 cut(s)	62, 177, 320, 396, 407, 845
BcoDI	GTCTC	3 cut(s)	1412, 1915, 2146
BfaI	CTAG	3 cut(s)	893, 1076, 1742
BfoI	RGCGCY	2 cut(s)	161, 1118
BfuAI	ACCTGC	1 cut(s)	977
BisI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2162, 2375, 2465
BlpI	GCTNAGC	1 cut(s)	681
BlsI	GCNGC	9 cut(s)	623, 1119, 1144, 1147, 1578, 1581, 2163, 2376, 2466
Bme18I	GGWCC	4 cut(s)	304, 325, 403, 1606
BmeT110I	CYCGRG	1 cut(s)	962
BmgT120I	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
BmsI	GCATC	6 cut(s)	361, 792, 1007, 1680, 2002, 2480
BpiI	GAAGAC	2 cut(s)	855, 1473
BplI	GAGNNNNNCTC	4 cut(s)	2260, 2292, 2350, 2382
BpmI	CTGGAG	1 cut(s)	1407
Bpu10I	CCTNAGC	1 cut(s)	1149
Bpu1102I	GCTNAGC	1 cut(s)	681
BpuMI	CCSGG	6 cut(s)	62, 177, 320, 396, 407, 845
BsaAI	YACGTR	2 cut(s)	1719, 2552
BsaI	GGTCTC	1 cut(s)	1915
BsaJI	CCNNGG	6 cut(s)	378, 549, 843, 2087, 2431, 2516
BsaWI	WCCGGW	2 cut(s)	190, 498
BsaXI	ACNNNNNCTCC	8 cut(s)	29, 56, 86, 98, 128, 660, 690, 2553
Bsc4I	CCNNNNNNNGG	8 cut(s)	412, 779, 968, 1053, 1615, 1840, 2281, 2355
Bse118I	RCCGGY	1 cut(s)	458
Bse1I	ACTGG	4 cut(s)	1096, 1304, 1406, 1525
Bse3DI	GCAATG	3 cut(s)	469, 474, 2233
BseBI	CCWGG	6 cut(s)	780, 1263, 1835, 2088, 2158, 2433
BseDI	CCNNGG	6 cut(s)	378, 549, 843, 2087, 2431, 2516
BseLI	CCNNNNNNNGG	8 cut(s)	412, 779, 968, 1053, 1615, 1840, 2281, 2355
BseMI	GCAATG	3 cut(s)	469, 474, 2233
BseMII	CTCAG	6 cut(s)	604, 672, 1361, 1380, 2381, 2418
BseNI	ACTGG	4 cut(s)	1096, 1304, 1406, 1525
BseSI	GKGCMC	3 cut(s)	638, 819, 1205
BseXI	GCAGC	7 cut(s)	633, 1104, 1129, 1132, 1588, 2148, 2451
BseYI	CCCAGC	1 cut(s)	36
BshFI	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2070, 2377
BshNI	GGYRCC	3 cut(s)	635, 1258, 2057
BsiHKAI	GWGCWC	2 cut(s)	363, 1626
BsiHKCI	CYCGRG	1 cut(s)	962
BslFI	GGGAC	4 cut(s)	416, 702, 1274, 2273
BslI	CCNNNNNNNGG	8 cut(s)	412, 779, 968, 1053, 1615, 1840, 2281, 2355
BsmAI	GTCTC	3 cut(s)	1412, 1915, 2146
BsmBI	CGTCTC	1 cut(s)	2146
BsmFI	GGGAC	4 cut(s)	416, 702, 1274, 2273
BsmI	GAATGC	2 cut(s)	1014, 2120
BsnI	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2070, 2377
Bso31I	GGTCTC	1 cut(s)	1915
BsoBI	CYCGRG	1 cut(s)	962
Bsp120I	GGGCCC	1 cut(s)	1201
Bsp1286I	GDGCHC	7 cut(s)	57, 93, 363, 638, 819, 1205, 1626
Bsp143I	GATC	8 cut(s)	526, 889, 939, 1213, 1459, 1495, 2047, 2093
Bsp1720I	GCTNAGC	1 cut(s)	681
Bsp19I	CCATGG	1 cut(s)	2516
BspANI	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2070, 2377
BspCNI	CTCAG	6 cut(s)	603, 673, 1362, 1381, 2380, 2417
BspMI	ACCTGC	1 cut(s)	977
BspPI	GGATC	4 cut(s)	947, 1208, 1454, 1490
BspT107I	GGYRCC	3 cut(s)	635, 1258, 2057
BspTNI	GGTCTC	1 cut(s)	1915
BsrDI	GCAATG	3 cut(s)	469, 474, 2233
BsrFI	RCCGGY	1 cut(s)	458
BsrI	ACTGG	4 cut(s)	1096, 1304, 1406, 1525
BssAI	RCCGGY	1 cut(s)	458
BssECI	CCNNGG	6 cut(s)	378, 549, 843, 2087, 2431, 2516
BssMI	GATC	8 cut(s)	526, 889, 939, 1213, 1459, 1495, 2047, 2093
BssT1I	CCWWGG	3 cut(s)	378, 549, 2516
Bst2UI	CCWGG	6 cut(s)	780, 1263, 1835, 2088, 2158, 2433
Bst4CI	ACNGT	7 cut(s)	143, 640, 1527, 1830, 1909, 2169, 2495
BstBAI	YACGTR	2 cut(s)	1719, 2552
BstC8I	GCNNGC	6 cut(s)	460, 807, 1073, 1122, 1724, 2469
BstDEI	CTNAG	7 cut(s)	590, 681, 1149, 1370, 1389, 2367, 2404
BstDSI	CCRYGG	1 cut(s)	2516
BstENI	CCTNNNNNAGG	3 cut(s)	777, 1838, 2353
BstH2I	RGCGCY	2 cut(s)	161, 1118
BstHHI	GCGC	3 cut(s)	160, 376, 1117
BstKTI	GATC	8 cut(s)	529, 892, 942, 1216, 1462, 1498, 2050, 2096
BstMAI	GTCTC	3 cut(s)	1412, 1915, 2146
BstMBI	GATC	8 cut(s)	526, 889, 939, 1213, 1459, 1495, 2047, 2093
BstMWI	GCNNNNNNNGC	6 cut(s)	1121, 1130, 1139, 1151, 1390, 1630
BstNI	CCWGG	6 cut(s)	780, 1263, 1835, 2088, 2158, 2433
BstNSI	RCATGY	3 cut(s)	1004, 1124, 2471
BstSLI	GKGCMC	3 cut(s)	638, 819, 1205
BstV1I	GCAGC	7 cut(s)	633, 1104, 1129, 1132, 1588, 2148, 2451
BstV2I	GAAGAC	2 cut(s)	855, 1473
BstX2I	RGATCY	1 cut(s)	1495
BstXI	CCANNNNNNTGG	1 cut(s)	336
BstYI	RGATCY	1 cut(s)	1495
BsuRI	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2070, 2377
BtgI	CCRYGG	1 cut(s)	2516
BtsI	GCAGTG	1 cut(s)	1713
BtsIMutI	CAGTG	5 cut(s)	27, 998, 1367, 1713, 2271
BveI	ACCTGC	1 cut(s)	977
Cac8I	GCNNGC	6 cut(s)	460, 807, 1073, 1122, 1724, 2469
CaiI	CAGNNNCTG	1 cut(s)	1457
CfoI	GCGC	3 cut(s)	160, 376, 1117
Cfr10I	RCCGGY	1 cut(s)	458
Cfr13I	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
Csp6I	GTAC	2 cut(s)	1044, 2058
CviQI	GTAC	2 cut(s)	1044, 2058
DdeI	CTNAG	7 cut(s)	590, 681, 1149, 1370, 1389, 2367, 2404
DpnI	GATC	8 cut(s)	528, 891, 941, 1215, 1461, 1497, 2049, 2095
DpnII	GATC	8 cut(s)	526, 889, 939, 1213, 1459, 1495, 2047, 2093
DraIII	CACNNNGTG	1 cut(s)	642
EaeI	YGGCCR	2 cut(s)	513, 2068
EciI	GGCGGA	1 cut(s)	1634
Ecl136II	GAGCTC	2 cut(s)	361, 1624
Eco130I	CCWWGG	3 cut(s)	378, 549, 2516
Eco24I	GRGCYC	5 cut(s)	57, 93, 363, 1205, 1626
Eco31I	GGTCTC	1 cut(s)	1915
Eco32I	GATATC	1 cut(s)	977
Eco47I	GGWCC	4 cut(s)	304, 325, 403, 1606
Eco47III	AGCGCT	2 cut(s)	159, 1116
Eco53kI	GAGCTC	2 cut(s)	361, 1624
Eco57I	CTGAAG	5 cut(s)	543, 831, 1485, 1512, 1776
Eco88I	CYCGRG	1 cut(s)	962
EcoICRI	GAGCTC	2 cut(s)	361, 1624
EcoNI	CCTNNNNNAGG	3 cut(s)	777, 1838, 2353
EcoO109I	RGGNCCY	4 cut(s)	304, 325, 403, 1201
EcoRII	CCWGG	6 cut(s)	778, 1261, 1833, 2086, 2156, 2431
EcoRV	GATATC	1 cut(s)	977
EcoT14I	CCWWGG	3 cut(s)	378, 549, 2516
EcoT22I	ATGCAT	2 cut(s)	1014, 2473
EcoT38I	GRGCYC	5 cut(s)	57, 93, 363, 1205, 1626
ErhI	CCWWGG	3 cut(s)	378, 549, 2516
Esp3I	CGTCTC	1 cut(s)	2146
FalI	AAGNNNNNCTT	2 cut(s)	1485, 1517
FaqI	GGGAC	4 cut(s)	416, 702, 1274, 2273
FauI	CCCGC	3 cut(s)	333, 477, 1117
FauNDI	CATATG	1 cut(s)	1309
FblI	GTMKAC	3 cut(s)	120, 150, 672
Fnu4HI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2162, 2375, 2465
FriOI	GRGCYC	5 cut(s)	57, 93, 363, 1205, 1626
Fsp4HI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2162, 2375, 2465
FspBI	CTAG	3 cut(s)	893, 1076, 1742
GlaI	GCGC	3 cut(s)	159, 375, 1116
GluI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2162, 2375, 2465
GsaI	CCCAGC	1 cut(s)	40
GsuI	CTGGAG	1 cut(s)	1407
HaeII	RGCGCY	2 cut(s)	161, 1118
HaeIII	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2070, 2377
HhaI	GCGC	3 cut(s)	160, 376, 1117
Hin6I	GCGC	3 cut(s)	158, 374, 1115
HinP1I	GCGC	3 cut(s)	158, 374, 1115
HincII	GTYRAC	4 cut(s)	151, 754, 1036, 1441
HindII	GTYRAC	4 cut(s)	151, 754, 1036, 1441
HindIII	AAGCTT	2 cut(s)	788, 1478
HpaI	GTTAAC	1 cut(s)	1441
HphI	GGTGA	7 cut(s)	34, 155, 380, 719, 1679, 2466, 2567
Hpy166II	GTNNAC	9 cut(s)	121, 151, 673, 754, 1036, 1168, 1441, 1606, 2299
Hpy188I	TCNGA	9 cut(s)	82, 88, 106, 593, 910, 944, 1158, 1390, 2491
Hpy188III	TCNNGA	6 cut(s)	209, 828, 878, 1424, 1463, 2051
Hpy8I	GTNNAC	9 cut(s)	121, 151, 673, 754, 1036, 1168, 1441, 1606, 2299
Hpy99I	CGWCG	2 cut(s)	110, 155
HpyCH4III	ACNGT	7 cut(s)	143, 640, 1527, 1830, 1909, 2169, 2495
HpyCH4IV	ACGT	3 cut(s)	675, 1718, 2551
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1121, 1130, 1139, 1151, 1390, 1630
HpyF3I	CTNAG	7 cut(s)	590, 681, 1149, 1370, 1389, 2367, 2404
HpySE526I	ACGT	3 cut(s)	675, 1718, 2551
HspAI	GCGC	3 cut(s)	158, 374, 1115
KflI	GGGWCCC	1 cut(s)	403
KpnI	GGTACC	1 cut(s)	2061
KroI	GCCGGC	1 cut(s)	458
KroNI	GCCGGC	1 cut(s)	460
KspAI	GTTAAC	1 cut(s)	1441
Kzo9I	GATC	8 cut(s)	526, 889, 939, 1213, 1459, 1495, 2047, 2093
LmnI	GCTCC	6 cut(s)	358, 484, 1369, 1621, 1629, 2530
Lsp1109I	GCAGC	7 cut(s)	633, 1104, 1129, 1132, 1588, 2148, 2451
LweI	GCATC	6 cut(s)	361, 792, 1007, 1680, 2002, 2480
MaeI	CTAG	3 cut(s)	893, 1076, 1742
MaeII	ACGT	3 cut(s)	675, 1718, 2551
MaeIII	GTNAC	4 cut(s)	137, 240, 1667, 2078
MalI	GATC	8 cut(s)	528, 891, 941, 1215, 1461, 1497, 2049, 2095
MboI	GATC	8 cut(s)	526, 889, 939, 1213, 1459, 1495, 2047, 2093
MfeI	CAATTG	1 cut(s)	1962
MflI	RGATCY	1 cut(s)	1495
MhlI	GDGCHC	7 cut(s)	57, 93, 363, 638, 819, 1205, 1626
MlsI	TGGCCA	1 cut(s)	2070
MluCI	AATT	7 cut(s)	163, 912, 1277, 1427, 1790, 1845, 1962
MluNI	TGGCCA	1 cut(s)	2070
MlyI	GAGTC	7 cut(s)	8, 77, 119, 678, 684, 1414, 2495
MmeI	TCCRAC	5 cut(s)	105, 129, 549, 843, 2469
Mox20I	TGGCCA	1 cut(s)	2070
Mph1103I	ATGCAT	2 cut(s)	1014, 2473
MroNI	GCCGGC	1 cut(s)	458
MroXI	GAANNNNTTC	3 cut(s)	227, 714, 1352
MscI	TGGCCA	1 cut(s)	2070
MseI	TTAA	5 cut(s)	441, 453, 1440, 1529, 2578
Msp20I	TGGCCA	1 cut(s)	2070
MunI	CAATTG	1 cut(s)	1962
Mva1269I	GAATGC	2 cut(s)	1014, 2120
MvaI	CCWGG	6 cut(s)	780, 1263, 1835, 2088, 2158, 2433
MwoI	GCNNNNNNNGC	6 cut(s)	1121, 1130, 1139, 1151, 1390, 1630
NaeI	GCCGGC	1 cut(s)	460
NciI	CCSGG	6 cut(s)	62, 177, 320, 396, 407, 845
NcoI	CCATGG	1 cut(s)	2516
NdeI	CATATG	1 cut(s)	1309
NdeII	GATC	8 cut(s)	526, 889, 939, 1213, 1459, 1495, 2047, 2093
NgoMIV	GCCGGC	1 cut(s)	458
NmuCI	GTSAC	1 cut(s)	1667
NsiI	ATGCAT	2 cut(s)	1014, 2473
NspI	RCATGY	3 cut(s)	1004, 1124, 2471
PaeI	GCATGC	2 cut(s)	1124, 2471
PcsI	WCGNNNNNNNCGW	3 cut(s)	105, 114, 147
PctI	GAATGC	2 cut(s)	1014, 2120
PdiI	GCCGGC	1 cut(s)	460
PdmI	GAANNNNTTC	3 cut(s)	227, 714, 1352
PfeI	GAWTC	4 cut(s)	32, 101, 2149, 2261
PfoI	TCCNGGA	1 cut(s)	318
PkrI	GCNGC	9 cut(s)	623, 1119, 1144, 1147, 1578, 1581, 2163, 2376, 2466
PleI	GAGTC	7 cut(s)	8, 77, 118, 677, 684, 1414, 2494
PpsI	GAGTC	7 cut(s)	8, 77, 118, 677, 684, 1414, 2494
Ppu21I	YACGTR	2 cut(s)	1719, 2552
PpuMI	RGGWCCY	3 cut(s)	304, 325, 403
Psp124BI	GAGCTC	2 cut(s)	363, 1626
Psp5II	RGGWCCY	3 cut(s)	304, 325, 403
Psp6I	CCWGG	6 cut(s)	778, 1261, 1833, 2086, 2156, 2431
PspFI	CCCAGC	1 cut(s)	36
PspGI	CCWGG	6 cut(s)	778, 1261, 1833, 2086, 2156, 2431
PspOMI	GGGCCC	1 cut(s)	1201
PspPI	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
PspPPI	RGGWCCY	3 cut(s)	304, 325, 403
PstNI	CAGNNNCTG	1 cut(s)	1457
PsuI	RGATCY	1 cut(s)	1495
RsaI	GTAC	2 cut(s)	1045, 2059
RsaNI	GTAC	2 cut(s)	1044, 2058
SacI	GAGCTC	2 cut(s)	363, 1626
SalI	GTCGAC	1 cut(s)	149
SaqAI	TTAA	5 cut(s)	441, 453, 1440, 1529, 2578
SatI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2162, 2375, 2465
Sau3AI	GATC	8 cut(s)	526, 889, 939, 1213, 1459, 1495, 2047, 2093
Sau96I	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
SchI	GAGTC	7 cut(s)	8, 77, 119, 678, 684, 1414, 2495
SduI	GDGCHC	7 cut(s)	57, 93, 363, 638, 819, 1205, 1626
SfaNI	GCATC	6 cut(s)	361, 792, 1007, 1680, 2002, 2480
SinI	GGWCC	4 cut(s)	304, 325, 403, 1606
SphI	GCATGC	2 cut(s)	1124, 2471
Sse9I	AATT	7 cut(s)	163, 912, 1277, 1427, 1790, 1845, 1962
SspMI	CTAG	3 cut(s)	893, 1076, 1742
SstI	GAGCTC	2 cut(s)	363, 1626
StyI	CCWWGG	3 cut(s)	378, 549, 2516
TaaI	ACNGT	7 cut(s)	143, 640, 1527, 1830, 1909, 2169, 2495
TaiI	ACGT	3 cut(s)	678, 1721, 2554
TaqI	TCGA	3 cut(s)	150, 973, 1542
TasI	AATT	7 cut(s)	163, 912, 1277, 1427, 1790, 1845, 1962
TauI	GCSGC	2 cut(s)	1582, 2377
TfiI	GAWTC	4 cut(s)	32, 101, 2149, 2261
Tru1I	TTAA	5 cut(s)	441, 453, 1440, 1529, 2578
Tru9I	TTAA	5 cut(s)	441, 453, 1440, 1529, 2578
TscAI	CASTG	5 cut(s)	34, 998, 1374, 1713, 2271
TseFI	GTSAC	1 cut(s)	1667
TseI	GCWGC	7 cut(s)	621, 1117, 1142, 1145, 1576, 2161, 2464
Tsp45I	GTSAC	1 cut(s)	1667
TspGWI	ACGGA	2 cut(s)	106, 2268
TspRI	CASTG	5 cut(s)	34, 998, 1374, 1713, 2271
VpaK11BI	GGWCC	4 cut(s)	304, 325, 403, 1606
XagI	CCTNNNNNAGG	3 cut(s)	777, 1838, 2353
XapI	RAATTY	2 cut(s)	912, 1427
XceI	RCATGY	3 cut(s)	1004, 1124, 2471
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2113
XmiI	GTMKAC	3 cut(s)	120, 150, 672
XmnI	GAANNNNTTC	3 cut(s)	227, 714, 1352
XspI	CTAG	3 cut(s)	893, 1076, 1742
Zsp2I	ATGCAT	2 cut(s)	1014, 2473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.