Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0006193

Physical Location & Seq

Genomic Coordinates Reverse (-)

59803252 .. 59811016

Gene Structure 7765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG386700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGCCAGACCAAGACTCCCCAAACCCCACTGAATCCCAGCTCACCGCCCAAGAGCCCGACCCGGACGGCCTCTCCTCCTCCGACTCCGAGCCCGACTACGATTCCGACGAGTCCTCCGTCTACGAAGGCGAGGGCGGTAATGGTGAAGTCGACGAAGCGCTCAATTTACTCCGGCCCGGCGAGGACATACCGGAGGACGAGAACACTCCCGAGGTGAATGTGAAGCTGTTCAACCAGGTGTTACAGGGGAAGAGAGTGAGGAGGAGGCAGGAGGAGGAGGACAGGGGGTATGTGTTTTACGAGGACCTGTTTGATTTCCCGGAGGACCCAGAGAAATGGCGGGAGGAGGACTTGAAGGAGCTCTGGGGTGATGCGCCCTTGGATATGACCAAACCCGGTTGGGACCCGGTTTGGGCTGATGAGGAGGAGTGGGAGATTGTTAAGGATGAGATTAAGGCCGGCAATGACCCGCCCATCGCTCCCTTTTATGTTCCCTACCGGAAGCCTTATCCGGCCATACCTGAAGATCATTATGACATTTCCAATCCCAAGGCTGTGATTGAAGAGTTGGATAGGATTGAGGAGTTTCTCAGATGGGTCAGCTATGTTTTCCCTGACGGCAGCTCGTATGAGGGCACCGTGTGGGATGACTTGGCTCATGGCAAAGGAGTCTACGTTGCTGAGCAGGGACTCGTCAGGTATGAAGGTGAATGGCTTCAAAACAACATGGAGGGTCATGGGGTTGTTGAAGTTGACATACCTGACATAGAGCCTATTCCAGGTTCCAAGCTTGAAGCACAGATGCGTGCTGAAGGGCACATAATATCAAGAGATTATATGACCCCAGAAGACAAAGAATGGTTGGAGATGGATATTCAAGACAGCATTGATCTAGCAGGGGGGCGGTCTGAAATTCCTTTTTATGAAAAAGATGAATGGATCAGACAGTTTGGGAGGAAACCCGAGAAAGGTCGATATCGCTATGCAGGTCAGTGGAAACATGCCAGAATGCATGGATGCGGAGTATATGAAGTCAACGAGCGTACCATATATGGGAGGTTCTACTTTGGCGAGCTAGTGGAGGATGATACTGGTTGTGATGAGGATGTATCAGCGCTGCATGCGGGTATTGCAGAAGTGGCTGCTGCTAAGGCTCGGATGTTTGTGAACAAGCCTGATGGAATGGTTAGGGAAGAGAGGGGCCCGTATAGTGACCCTCAACATCCCTATTTCTATGAAGATGAAGATGTTTGGATGGCACCAGGCTTCATAAACCAATTCTATGAAGTCCCTGATTACTGGAAAACATATGTGCATGAGGTTGATGAGGAAAGGGAAATGTGGTTGAACTCCTTCTATAAAGCTCCACTGAGAATACCTATGCCTTCTGAGCTTGAATACTGGTGGTCAAAGGAGGAGACTCCAGAATTTATTGTTGTTAACAAGGAACCAGAGCCTGATCCTGAAGACCCATCGAAGCTTATATATACTGAGGATCCACTTATCCTTCACACACGAACTGGACGGTTAATCAACTATATCGAAGATGAAAAACATGGGGTTCGCCTATTTTGGCAGCCGCCTCTCAAAGATGGGGAAGAGGTGGACCCAGAAAATGCGGAGCTCCTTCCGCTTGGTTATGACGAGTTCTATGGACAAAACATTGGTGACAAGAAACAAAACTTTTTGATGCGACTTATATCAGCAGTGGAAAATACATGCAAGCCTGTTTTTGATAAACTAGAGAAATGGACTGAAGAGAAGAGGAAAGCAAGTGAGATGAAGATGAAATTGATTGAAAAAGAACTTGAACTGATAGAGGCTGAACTGTGCCTGGAAGAGGTAATTGAGGATATGGATGAGGAGTTGAAGATGAGAGAGAAAGAGGAGGAGAAGAATGTGGAAATGGTCTCGCCGGATGAAGAAGATACTTCTCCATTGGCTAACCAAGATGAGAAATCAATTGAAGAGGAGGAAGAGGAAGAGGAAGAGGAAGATGAAGATGAAGATGAAGATGATGCTGTGCCATCAAGTTTTGGGTCTGTAAGAGGAGATCAGGATGGTACCAAAAATGGCCAGAAGGGTAACAAACCTGGGCGATCTCCATTTTCCACATCCTCATTGGCATTCGCTTCAAGTAGCCTCGTCTCTGGGATTCCATCCAGGCTGCAACAGTCGTTTTTAGCATGGAAAAATAGTAAAGCAATACCAAAGACAGCTACTTCTTCATGCAATGAAGCCTCTTGTTGCAACTTGAAAACAGTTGATTCAGTGAGTTTCCCTCCGTTGGTTGTCCCAAAAGTAAACTTGAAAGCCCTAAAGCAAAGACACTTGAACTTCCAAGCCAAAATCTCCTCAAATAGGAGGCTATCTCAGTTGCGGCCTTCATCTCAAATAAGCTCACATCACTCAGCTTCTATGAACACCAGAATAAAACCAGGAGAAATGAGATTGAAAAACAATAGTTGGCTGCATGCATCACCAGAGAGGGAGTCGGACAGTATATTGTCTTTGCACACACCATGGTATCATTTGGAGCCAAATGAAGAAACCATACGTGGTGATCCACTTCCTCTCCTTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009658 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042170 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0061458 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

861

Amino Acids

99.21

Weight (kDa)

4.46

Isoelectric Point (pI)

59.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22640 AT5G22640 AT5G22640
fragaria_vesca	FvH4_3g29910 FvH4_3g29910 FvH4_3g29910
malus_domestica	MD03G1134600.v1.1 MD11G1157100.v1.1
prunus_persica	Prupe.6G118900_v2.0.a1 Prupe.6G118900_v2.0.a1
pyrus_communis	pycom03g09060 pycom11g12730
rosa_chinensis	RchiOBHm_Chr5g0055251
rosa_laevigata	RLG00000034978
rosa_multiflora	Rmu_co8251283.1_g000001 Rmu_co8349015.1_g000001 Rmu_sc0003110.1_g000015 Rmu_sc0013362.1_g000001 Rmu_sc0014992.1_g000001
rosa_roxburghii	Rroxscaffold_1G00025050
rosa_rugosa	Rorug05G0292100 Rorug05G0292200
rosa_samantha	Rh5AG361900 Rh5BG373500 Rh5CG395200 Rh5DG386700
rosa_wichuraiana	Rw5G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	977
Acc65I	GGTACC	1 cut(s)	2063
AccB1I	GGYRCC	3 cut(s)	635, 1258, 2063
AccI	GTMKAC	3 cut(s)	120, 150, 672
AclWI	GGATC	5 cut(s)	947, 1454, 1490, 1503, 2558
AcoI	YGGCCR	2 cut(s)	513, 2074
AcsI	RAATTY	2 cut(s)	912, 1427
AcuI	CTGAAG	4 cut(s)	543, 831, 1485, 1776
AdeI	CACNNNGTG	1 cut(s)	642
AfaI	GTAC	2 cut(s)	1045, 2065
AfeI	AGCGCT	2 cut(s)	159, 1116
AfiI	CCNNNNNNNGG	7 cut(s)	412, 779, 968, 1053, 1840, 2287, 2361
AjnI	CCWGG	7 cut(s)	234, 778, 1261, 1833, 2092, 2162, 2437
Alw21I	GWGCWC	2 cut(s)	363, 1626
Alw26I	GTCTC	3 cut(s)	1412, 1915, 2152
AlwI	GGATC	5 cut(s)	947, 1454, 1490, 1503, 2558
AlwNI	CAGNNNCTG	1 cut(s)	1457
Ama87I	CYCGRG	2 cut(s)	209, 962
Aor51HI	AGCGCT	2 cut(s)	159, 1116
AoxI	GGCC	7 cut(s)	67, 173, 456, 513, 1201, 2074, 2381
ApaI	GGGCCC	1 cut(s)	1205
ApeKI	GCWGC	7 cut(s)	621, 1117, 1142, 1145, 1576, 2167, 2470
ApoI	RAATTY	2 cut(s)	912, 1427
Asp700I	GAANNNNTTC	3 cut(s)	227, 714, 1352
Asp718I	GGTACC	1 cut(s)	2063
AspLEI	GCGC	3 cut(s)	160, 376, 1117
AspS9I	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
AsuC2I	CCSGG	5 cut(s)	62, 177, 320, 396, 407
AsuHPI	GGTGA	8 cut(s)	34, 155, 226, 380, 719, 1679, 2472, 2573
AvaI	CYCGRG	2 cut(s)	209, 962
AvaII	GGWCC	4 cut(s)	304, 325, 403, 1606
BaeGI	GKGCMC	3 cut(s)	638, 819, 1205
BaeI	ACNNNNGTAYC	4 cut(s)	1027, 1060, 2510, 2543
BalI	TGGCCA	1 cut(s)	2076
BamHI	GGATCC	1 cut(s)	1495
BanI	GGYRCC	3 cut(s)	635, 1258, 2063
BanII	GRGCYC	5 cut(s)	57, 93, 363, 1205, 1626
BarI	GAAGNNNNNNTAC	4 cut(s)	741, 773, 2538, 2570
BbsI	GAAGAC	2 cut(s)	855, 1473
Bbv12I	GWGCWC	2 cut(s)	363, 1626
BbvI	GCAGC	7 cut(s)	633, 1104, 1129, 1132, 1588, 2154, 2457
BceAI	ACGGC	2 cut(s)	82, 634
BciT130I	CCWGG	7 cut(s)	236, 780, 1263, 1835, 2094, 2164, 2439
BcnI	CCSGG	5 cut(s)	62, 177, 320, 396, 407
BcoDI	GTCTC	3 cut(s)	1412, 1915, 2152
BfaI	CTAG	3 cut(s)	893, 1076, 1742
BfoI	RGCGCY	2 cut(s)	161, 1118
BfuAI	ACCTGC	1 cut(s)	977
BisI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2168, 2381, 2471
BlpI	GCTNAGC	1 cut(s)	681
BlsI	GCNGC	9 cut(s)	623, 1119, 1144, 1147, 1578, 1581, 2169, 2382, 2472
Bme18I	GGWCC	4 cut(s)	304, 325, 403, 1606
BmeT110I	CYCGRG	2 cut(s)	209, 962
BmgT120I	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
BmsI	GCATC	6 cut(s)	361, 792, 1007, 1680, 2008, 2486
BpiI	GAAGAC	2 cut(s)	855, 1473
BplI	GAGNNNNNCTC	4 cut(s)	2266, 2298, 2356, 2388
BpmI	CTGGAG	1 cut(s)	1407
Bpu10I	CCTNAGC	1 cut(s)	1149
Bpu1102I	GCTNAGC	1 cut(s)	681
BpuMI	CCSGG	5 cut(s)	62, 177, 320, 396, 407
BsaAI	YACGTR	1 cut(s)	2558
BsaI	GGTCTC	1 cut(s)	1915
BsaJI	CCNNGG	5 cut(s)	210, 378, 549, 2093, 2522
BsaWI	WCCGGW	2 cut(s)	190, 498
BsaXI	ACNNNNNCTCC	8 cut(s)	29, 56, 86, 98, 128, 660, 690, 2559
Bsc4I	CCNNNNNNNGG	7 cut(s)	412, 779, 968, 1053, 1840, 2287, 2361
Bse118I	RCCGGY	1 cut(s)	458
Bse1I	ACTGG	4 cut(s)	1096, 1304, 1406, 1525
Bse3DI	GCAATG	2 cut(s)	469, 2239
BseBI	CCWGG	7 cut(s)	236, 780, 1263, 1835, 2094, 2164, 2439
BseDI	CCNNGG	5 cut(s)	210, 378, 549, 2093, 2522
BseLI	CCNNNNNNNGG	7 cut(s)	412, 779, 968, 1053, 1840, 2287, 2361
BseMI	GCAATG	2 cut(s)	469, 2239
BseMII	CTCAG	7 cut(s)	604, 672, 1361, 1380, 1482, 2387, 2424
BseNI	ACTGG	4 cut(s)	1096, 1304, 1406, 1525
BseSI	GKGCMC	3 cut(s)	638, 819, 1205
BseXI	GCAGC	7 cut(s)	633, 1104, 1129, 1132, 1588, 2154, 2457
BseYI	CCCAGC	1 cut(s)	36
BshFI	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2076, 2383
BshNI	GGYRCC	3 cut(s)	635, 1258, 2063
BsiHKAI	GWGCWC	2 cut(s)	363, 1626
BsiHKCI	CYCGRG	2 cut(s)	209, 962
BslFI	GGGAC	4 cut(s)	416, 702, 1274, 2279
BslI	CCNNNNNNNGG	7 cut(s)	412, 779, 968, 1053, 1840, 2287, 2361
BsmAI	GTCTC	3 cut(s)	1412, 1915, 2152
BsmBI	CGTCTC	1 cut(s)	2152
BsmFI	GGGAC	4 cut(s)	416, 702, 1274, 2279
BsmI	GAATGC	2 cut(s)	1014, 2126
BsnI	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2076, 2383
Bso31I	GGTCTC	1 cut(s)	1915
BsoBI	CYCGRG	2 cut(s)	209, 962
Bsp120I	GGGCCC	1 cut(s)	1201
Bsp1286I	GDGCHC	7 cut(s)	57, 93, 363, 638, 819, 1205, 1626
Bsp143I	GATC	8 cut(s)	526, 889, 939, 1459, 1495, 2053, 2099, 2563
Bsp1720I	GCTNAGC	1 cut(s)	681
Bsp19I	CCATGG	1 cut(s)	2522
BspANI	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2076, 2383
BspCNI	CTCAG	7 cut(s)	603, 673, 1362, 1381, 1483, 2386, 2423
BspMI	ACCTGC	1 cut(s)	977
BspPI	GGATC	5 cut(s)	947, 1454, 1490, 1503, 2558
BspT107I	GGYRCC	3 cut(s)	635, 1258, 2063
BspTNI	GGTCTC	1 cut(s)	1915
BsrDI	GCAATG	2 cut(s)	469, 2239
BsrFI	RCCGGY	1 cut(s)	458
BsrI	ACTGG	4 cut(s)	1096, 1304, 1406, 1525
BssAI	RCCGGY	1 cut(s)	458
BssECI	CCNNGG	5 cut(s)	210, 378, 549, 2093, 2522
BssMI	GATC	8 cut(s)	526, 889, 939, 1459, 1495, 2053, 2099, 2563
BssT1I	CCWWGG	3 cut(s)	378, 549, 2522
Bst2UI	CCWGG	7 cut(s)	236, 780, 1263, 1835, 2094, 2164, 2439
Bst4CI	ACNGT	7 cut(s)	640, 948, 1527, 1830, 2175, 2263, 2501
BstBAI	YACGTR	1 cut(s)	2558
BstC8I	GCNNGC	6 cut(s)	460, 807, 1073, 1122, 1724, 2475
BstDEI	CTNAG	8 cut(s)	590, 681, 1149, 1370, 1389, 1491, 2373, 2410
BstDSI	CCRYGG	1 cut(s)	2522
BstENI	CCTNNNNNAGG	3 cut(s)	777, 1838, 2359
BstH2I	RGCGCY	2 cut(s)	161, 1118
BstHHI	GCGC	3 cut(s)	160, 376, 1117
BstKTI	GATC	8 cut(s)	529, 892, 942, 1462, 1498, 2056, 2102, 2566
BstMAI	GTCTC	3 cut(s)	1412, 1915, 2152
BstMBI	GATC	8 cut(s)	526, 889, 939, 1459, 1495, 2053, 2099, 2563
BstMWI	GCNNNNNNNGC	6 cut(s)	1121, 1130, 1139, 1151, 1390, 1630
BstNI	CCWGG	7 cut(s)	236, 780, 1263, 1835, 2094, 2164, 2439
BstNSI	RCATGY	4 cut(s)	1004, 1124, 1722, 2477
BstSLI	GKGCMC	3 cut(s)	638, 819, 1205
BstV1I	GCAGC	7 cut(s)	633, 1104, 1129, 1132, 1588, 2154, 2457
BstV2I	GAAGAC	2 cut(s)	855, 1473
BstX2I	RGATCY	1 cut(s)	1495
BstXI	CCANNNNNNTGG	1 cut(s)	336
BstYI	RGATCY	1 cut(s)	1495
BsuRI	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2076, 2383
BtgI	CCRYGG	1 cut(s)	2522
BtgZI	GCGATG	1 cut(s)	460
BtsI	GCAGTG	1 cut(s)	1713
BtsIMutI	CAGTG	5 cut(s)	27, 998, 1367, 1713, 2277
BveI	ACCTGC	1 cut(s)	977
Cac8I	GCNNGC	6 cut(s)	460, 807, 1073, 1122, 1724, 2475
CaiI	CAGNNNCTG	1 cut(s)	1457
CfoI	GCGC	3 cut(s)	160, 376, 1117
Cfr10I	RCCGGY	1 cut(s)	458
Cfr13I	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
CsiI	ACCWGGT	1 cut(s)	234
Csp6I	GTAC	2 cut(s)	1044, 2064
CviQI	GTAC	2 cut(s)	1044, 2064
DdeI	CTNAG	8 cut(s)	590, 681, 1149, 1370, 1389, 1491, 2373, 2410
DpnI	GATC	8 cut(s)	528, 891, 941, 1461, 1497, 2055, 2101, 2565
DpnII	GATC	8 cut(s)	526, 889, 939, 1459, 1495, 2053, 2099, 2563
DraIII	CACNNNGTG	1 cut(s)	642
EaeI	YGGCCR	2 cut(s)	513, 2074
Ecl136II	GAGCTC	2 cut(s)	361, 1624
Eco130I	CCWWGG	3 cut(s)	378, 549, 2522
Eco24I	GRGCYC	5 cut(s)	57, 93, 363, 1205, 1626
Eco31I	GGTCTC	1 cut(s)	1915
Eco32I	GATATC	1 cut(s)	977
Eco47I	GGWCC	4 cut(s)	304, 325, 403, 1606
Eco47III	AGCGCT	2 cut(s)	159, 1116
Eco53kI	GAGCTC	2 cut(s)	361, 1624
Eco57I	CTGAAG	4 cut(s)	543, 831, 1485, 1776
Eco88I	CYCGRG	2 cut(s)	209, 962
EcoICRI	GAGCTC	2 cut(s)	361, 1624
EcoNI	CCTNNNNNAGG	3 cut(s)	777, 1838, 2359
EcoO109I	RGGNCCY	4 cut(s)	304, 325, 403, 1201
EcoRII	CCWGG	7 cut(s)	234, 778, 1261, 1833, 2092, 2162, 2437
EcoRV	GATATC	1 cut(s)	977
EcoT14I	CCWWGG	3 cut(s)	378, 549, 2522
EcoT22I	ATGCAT	2 cut(s)	1014, 2479
EcoT38I	GRGCYC	5 cut(s)	57, 93, 363, 1205, 1626
ErhI	CCWWGG	3 cut(s)	378, 549, 2522
Esp3I	CGTCTC	1 cut(s)	2152
FaqI	GGGAC	4 cut(s)	416, 702, 1274, 2279
FauI	CCCGC	3 cut(s)	333, 477, 1117
FauNDI	CATATG	1 cut(s)	1309
FblI	GTMKAC	3 cut(s)	120, 150, 672
Fnu4HI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2168, 2381, 2471
FriOI	GRGCYC	5 cut(s)	57, 93, 363, 1205, 1626
Fsp4HI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2168, 2381, 2471
FspBI	CTAG	3 cut(s)	893, 1076, 1742
GlaI	GCGC	3 cut(s)	159, 375, 1116
GluI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2168, 2381, 2471
GsaI	CCCAGC	1 cut(s)	40
GsuI	CTGGAG	1 cut(s)	1407
HaeII	RGCGCY	2 cut(s)	161, 1118
HaeIII	GGCC	7 cut(s)	69, 175, 458, 515, 1203, 2076, 2383
HhaI	GCGC	3 cut(s)	160, 376, 1117
Hin6I	GCGC	3 cut(s)	158, 374, 1115
HinP1I	GCGC	3 cut(s)	158, 374, 1115
HincII	GTYRAC	4 cut(s)	151, 754, 1036, 1441
HindII	GTYRAC	4 cut(s)	151, 754, 1036, 1441
HindIII	AAGCTT	2 cut(s)	788, 1478
HpaI	GTTAAC	1 cut(s)	1441
HphI	GGTGA	8 cut(s)	34, 155, 226, 380, 719, 1679, 2472, 2573
Hpy166II	GTNNAC	9 cut(s)	121, 151, 673, 754, 1036, 1168, 1441, 1606, 2305
Hpy188I	TCNGA	9 cut(s)	82, 88, 106, 593, 910, 944, 1158, 1390, 2497
Hpy188III	TCNNGA	6 cut(s)	209, 828, 878, 1424, 1463, 2057
Hpy8I	GTNNAC	9 cut(s)	121, 151, 673, 754, 1036, 1168, 1441, 1606, 2305
Hpy99I	CGWCG	2 cut(s)	110, 155
HpyCH4III	ACNGT	7 cut(s)	640, 948, 1527, 1830, 2175, 2263, 2501
HpyCH4IV	ACGT	2 cut(s)	675, 2557
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1121, 1130, 1139, 1151, 1390, 1630
HpyF3I	CTNAG	8 cut(s)	590, 681, 1149, 1370, 1389, 1491, 2373, 2410
HpySE526I	ACGT	2 cut(s)	675, 2557
HspAI	GCGC	3 cut(s)	158, 374, 1115
KflI	GGGWCCC	1 cut(s)	403
KpnI	GGTACC	1 cut(s)	2067
KroI	GCCGGC	1 cut(s)	458
KroNI	GCCGGC	1 cut(s)	460
KspAI	GTTAAC	1 cut(s)	1441
Kzo9I	GATC	8 cut(s)	526, 889, 939, 1459, 1495, 2053, 2099, 2563
LmnI	GCTCC	6 cut(s)	358, 484, 1369, 1621, 1629, 2536
Lsp1109I	GCAGC	7 cut(s)	633, 1104, 1129, 1132, 1588, 2154, 2457
LweI	GCATC	6 cut(s)	361, 792, 1007, 1680, 2008, 2486
MabI	ACCWGGT	1 cut(s)	234
MaeI	CTAG	3 cut(s)	893, 1076, 1742
MaeII	ACGT	2 cut(s)	675, 2557
MaeIII	GTNAC	4 cut(s)	240, 1211, 1667, 2084
MalI	GATC	8 cut(s)	528, 891, 941, 1461, 1497, 2055, 2101, 2565
MboI	GATC	8 cut(s)	526, 889, 939, 1459, 1495, 2053, 2099, 2563
MfeI	CAATTG	1 cut(s)	1962
MflI	RGATCY	1 cut(s)	1495
MhlI	GDGCHC	7 cut(s)	57, 93, 363, 638, 819, 1205, 1626
MlsI	TGGCCA	1 cut(s)	2076
MluCI	AATT	7 cut(s)	163, 912, 1277, 1427, 1790, 1845, 1962
MluNI	TGGCCA	1 cut(s)	2076
MlyI	GAGTC	7 cut(s)	8, 77, 119, 678, 684, 1414, 2501
MmeI	TCCRAC	5 cut(s)	105, 129, 549, 843, 2475
Mox20I	TGGCCA	1 cut(s)	2076
Mph1103I	ATGCAT	2 cut(s)	1014, 2479
MroNI	GCCGGC	1 cut(s)	458
MroXI	GAANNNNTTC	3 cut(s)	227, 714, 1352
MscI	TGGCCA	1 cut(s)	2076
MseI	TTAA	5 cut(s)	441, 453, 1440, 1529, 2584
Msp20I	TGGCCA	1 cut(s)	2076
MunI	CAATTG	1 cut(s)	1962
Mva1269I	GAATGC	2 cut(s)	1014, 2126
MvaI	CCWGG	7 cut(s)	236, 780, 1263, 1835, 2094, 2164, 2439
MwoI	GCNNNNNNNGC	6 cut(s)	1121, 1130, 1139, 1151, 1390, 1630
NaeI	GCCGGC	1 cut(s)	460
NciI	CCSGG	5 cut(s)	62, 177, 320, 396, 407
NcoI	CCATGG	1 cut(s)	2522
NdeI	CATATG	1 cut(s)	1309
NdeII	GATC	8 cut(s)	526, 889, 939, 1459, 1495, 2053, 2099, 2563
NgoMIV	GCCGGC	1 cut(s)	458
NmuCI	GTSAC	2 cut(s)	1211, 1667
NsiI	ATGCAT	2 cut(s)	1014, 2479
NspI	RCATGY	4 cut(s)	1004, 1124, 1722, 2477
PaeI	GCATGC	2 cut(s)	1124, 2477
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 114
PctI	GAATGC	2 cut(s)	1014, 2126
PdiI	GCCGGC	1 cut(s)	460
PdmI	GAANNNNTTC	3 cut(s)	227, 714, 1352
PfeI	GAWTC	4 cut(s)	32, 101, 2155, 2267
PfoI	TCCNGGA	1 cut(s)	318
PkrI	GCNGC	9 cut(s)	623, 1119, 1144, 1147, 1578, 1581, 2169, 2382, 2472
PleI	GAGTC	7 cut(s)	8, 77, 118, 677, 684, 1414, 2500
PpsI	GAGTC	7 cut(s)	8, 77, 118, 677, 684, 1414, 2500
Ppu21I	YACGTR	1 cut(s)	2558
PpuMI	RGGWCCY	3 cut(s)	304, 325, 403
Psp124BI	GAGCTC	2 cut(s)	363, 1626
Psp5II	RGGWCCY	3 cut(s)	304, 325, 403
Psp6I	CCWGG	7 cut(s)	234, 778, 1261, 1833, 2092, 2162, 2437
PspFI	CCCAGC	1 cut(s)	36
PspGI	CCWGG	7 cut(s)	234, 778, 1261, 1833, 2092, 2162, 2437
PspOMI	GGGCCC	1 cut(s)	1201
PspPI	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
PspPPI	RGGWCCY	3 cut(s)	304, 325, 403
PstNI	CAGNNNCTG	1 cut(s)	1457
PsuI	RGATCY	1 cut(s)	1495
RsaI	GTAC	2 cut(s)	1045, 2065
RsaNI	GTAC	2 cut(s)	1044, 2064
SacI	GAGCTC	2 cut(s)	363, 1626
SalI	GTCGAC	1 cut(s)	149
SaqAI	TTAA	5 cut(s)	441, 453, 1440, 1529, 2584
SatI	GCNGC	9 cut(s)	622, 1118, 1143, 1146, 1577, 1580, 2168, 2381, 2471
Sau3AI	GATC	8 cut(s)	526, 889, 939, 1459, 1495, 2053, 2099, 2563
Sau96I	GGNCC	7 cut(s)	174, 304, 325, 403, 1201, 1202, 1606
SchI	GAGTC	7 cut(s)	8, 77, 119, 678, 684, 1414, 2501
SduI	GDGCHC	7 cut(s)	57, 93, 363, 638, 819, 1205, 1626
SexAI	ACCWGGT	1 cut(s)	234
SfaNI	GCATC	6 cut(s)	361, 792, 1007, 1680, 2008, 2486
SinI	GGWCC	4 cut(s)	304, 325, 403, 1606
SphI	GCATGC	2 cut(s)	1124, 2477
Sse9I	AATT	7 cut(s)	163, 912, 1277, 1427, 1790, 1845, 1962
SspMI	CTAG	3 cut(s)	893, 1076, 1742
SstI	GAGCTC	2 cut(s)	363, 1626
StyI	CCWWGG	3 cut(s)	378, 549, 2522
TaaI	ACNGT	7 cut(s)	640, 948, 1527, 1830, 2175, 2263, 2501
TaiI	ACGT	2 cut(s)	678, 2560
TaqI	TCGA	4 cut(s)	150, 973, 1475, 1542
TasI	AATT	7 cut(s)	163, 912, 1277, 1427, 1790, 1845, 1962
TauI	GCSGC	2 cut(s)	1582, 2383
TfiI	GAWTC	4 cut(s)	32, 101, 2155, 2267
Tru1I	TTAA	5 cut(s)	441, 453, 1440, 1529, 2584
Tru9I	TTAA	5 cut(s)	441, 453, 1440, 1529, 2584
TscAI	CASTG	5 cut(s)	34, 998, 1374, 1713, 2277
TseFI	GTSAC	2 cut(s)	1211, 1667
TseI	GCWGC	7 cut(s)	621, 1117, 1142, 1145, 1576, 2167, 2470
Tsp45I	GTSAC	2 cut(s)	1211, 1667
TspGWI	ACGGA	2 cut(s)	106, 2274
TspRI	CASTG	5 cut(s)	34, 998, 1374, 1713, 2277
VpaK11BI	GGWCC	4 cut(s)	304, 325, 403, 1606
XagI	CCTNNNNNAGG	3 cut(s)	777, 1838, 2359
XapI	RAATTY	2 cut(s)	912, 1427
XceI	RCATGY	4 cut(s)	1004, 1124, 1722, 2477
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2119
XmiI	GTMKAC	3 cut(s)	120, 150, 672
XmnI	GAANNNNTTC	3 cut(s)	227, 714, 1352
XspI	CTAG	3 cut(s)	893, 1076, 1742
Zsp2I	ATGCAT	2 cut(s)	1014, 2479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.