Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006193

Physical Location & Seq

Genomic Coordinates Reverse (-)

58728480 .. 58736865

Gene Structure 8386 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG373500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGTGCCAAACCTATGGTGTCAAGAAGCAGTATGAAGGTGAATGGCTTCAAAACAACATGGAGGGTCATGGGGTTGTTGAAGTTGACATACCTGACATAGAGCCTATTCCAGGTTCCAAGCTTGAAGCACAGATGCGTGCTGAAGGGCACATAATATCAAGAGATTATATGACCCCGGAAGACAAAGAATGGTTGGAGATGGATATTCAAGACAGCATTGATCTAGCAGGGGGGCGGTCTGAAATTCCTTTTTATGAAAAAGATGAATGGATCAGACATTTTGGGAGGAAACTCGAGAAAGGTCGATATCGCTATGCAGGTCAGTGGAAACATGCCAGAATGCATGGATGCGGAGTATATGAAGTCAACGAGCGTACCATATATGGGAGGTTCTACTTTGGCGAGCTAGTGGAGGATGATACTGGTTGTGATGAGGATGTATCAGCGCTGCATGCGGGTATTGCAGAAGTGGCTGCTGCTAAGGCTCGGATGTTTGTGAACAAGCCTGATGGAATGGTTAGGGAAGAGAGGGGCCCGTATAGTGATCCTCAACATCCCTATTTCTATGAAGATGAAGATGTTTGGATGGCACCAGGCTTCATAAACCAATTCTATGAAGTCCCTGATTACTGGAAAACATATGTGCATGAGGTTGATGAGGAAAGGGAAATGTGGTTGAACTCCTTCTATAAAGCTCCACTGAGAATACCTATGCCTTCTGAGCTTGAATACTGGTGGTCAAAGGAGGAGACTCCAGAATTTATTGTTGTTAACAAGGAACCAGAGCCTGATCCTGAAGACCCATCAAAGCTTATATATACTGAAGATCCACTTATCCTTCACACACGAACTGGGCGGTTAATCAACTATATCGAAGATGAAAAACATGGGGTTCGCCTATTTTGGCAGCCGCTTCTCAAAGATGGGGAAGAGGTGGACCCAGAAAAGGCGGAGCTCCTTCCGCTTGGTTATGACGAGTTCTATGGACAAAACATTGGTGACAAGAAACAAAACTTTTTGATGCGACTTATATCAGCAGTGGAAAATACATGCAAGCCTGTTTTTGATAAACTAGAGAAATGGACTGAAGAGAAGAGGAAAGCAAGTGAGATGAAGATGAAATTGATTGAAAAAGAACTTGAACTGATAGAGGCTGAACTGTGCCTGGAAGAGGTAATTGAGGATATGGATGAGGAGTTGAAGATGAGAGAGAAAGAGGAGGAGAAGAATGTGGAAACGGTCTCGCCGGATGAAGAAGATACTTCTCCATTGGCTAACCAAGATGAGAAATCAATTGAAGAGGATGAAGAGGAAGAGGAAGATGAAGATGAAGATGATGCTGTGCCATCAAGTTTTGGGTCTGTAAGAGGAGATCAGGATGGTACCAAAAATGGCCAGAAGGGTAACAAACCTGGGCGATCTCCATTTTCCACATCCTCATTGGCATTCGCTTCAAGTAGCCTCGTCTCTGGGATTCCATCCAGGCTGCAACAGTCGTTTTTAGCATGGAAAAATAGTAAAGCAATACCAAAGACAGCTACTTCTTCATGCAATGAAGCCTCTTGTTGCAACTTGAAAACAGTTGATTCAGTGAGTTTCCCTCCGTTGGTTGTCCCAAAAGTAAACTTGAAAGCCCTAAAGCAAAGACACTTGAACTTCCAAGCCAAAATCTCCTCAAATAGGAGGCTATCTCAGCTGTGGCCTTCATCTCAAATAAGCTCACATCACTCAGCTTCTATGAACACCAGAATAAGCCCAGGAGAAATGAGATTGAAAAACAATAGTTGGCTGCATGCATCACCAGAGAGGGAGTCGGACAGTATATTGTCTTTGCACACACCATGGTATCATTTGGAGCCAAATGAAGAAACCATACGTGGTGAGCCACTTCCTCTCCTTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009658 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042170 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0061458 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

634

Amino Acids

73.14

Weight (kDa)

4.74

Isoelectric Point (pI)

54.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22640 AT5G22640 AT5G22640
fragaria_vesca	FvH4_3g29910 FvH4_3g29910 FvH4_3g29910
malus_domestica	MD03G1134600.v1.1 MD11G1157100.v1.1
prunus_persica	Prupe.6G118900_v2.0.a1 Prupe.6G118900_v2.0.a1
pyrus_communis	pycom03g09060 pycom11g12730
rosa_chinensis	RchiOBHm_Chr5g0055251
rosa_laevigata	RLG00000034978
rosa_multiflora	Rmu_co8251283.1_g000001 Rmu_co8349015.1_g000001 Rmu_sc0003110.1_g000015 Rmu_sc0013362.1_g000001 Rmu_sc0014992.1_g000001
rosa_roxburghii	Rroxscaffold_1G00025050
rosa_rugosa	Rorug05G0292100 Rorug05G0292200
rosa_samantha	Rh5AG361900 Rh5BG373500 Rh5CG395200 Rh5DG386700
rosa_wichuraiana	Rw5G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	308
Acc65I	GGTACC	1 cut(s)	1382
AccB1I	GGYRCC	2 cut(s)	589, 1382
AciI	CCGC	7 cut(s)	235, 351, 455, 856, 911, 950, 962
AclWI	GGATC	4 cut(s)	278, 539, 785, 821
AcoI	YGGCCR	1 cut(s)	1393
AcsI	RAATTY	2 cut(s)	243, 758
AcuI	CTGAAG	4 cut(s)	162, 816, 843, 1107
AfaI	GTAC	2 cut(s)	376, 1384
AfeI	AGCGCT	1 cut(s)	447
AfiI	CCNNNNNNNGG	6 cut(s)	110, 384, 946, 1171, 1606, 1680
AjnI	CCWGG	6 cut(s)	109, 592, 1164, 1411, 1481, 1756
Alw21I	GWGCWC	1 cut(s)	957
Alw26I	GTCTC	3 cut(s)	743, 1246, 1471
AlwI	GGATC	4 cut(s)	278, 539, 785, 821
AlwNI	CAGNNNCTG	1 cut(s)	788
Ama87I	CYCGRG	1 cut(s)	293
Aor51HI	AGCGCT	1 cut(s)	447
AoxI	GGCC	3 cut(s)	532, 1393, 1700
ApaI	GGGCCC	1 cut(s)	536
ApeKI	GCWGC	6 cut(s)	448, 473, 476, 907, 1486, 1789
ApoI	RAATTY	2 cut(s)	243, 758
Asp700I	GAANNNNTTC	2 cut(s)	45, 683
Asp718I	GGTACC	1 cut(s)	1382
AspLEI	GCGC	1 cut(s)	448
AspS9I	GGNCC	3 cut(s)	532, 533, 937
AsuC2I	CCSGG	1 cut(s)	176
AsuHPI	GGTGA	4 cut(s)	50, 1010, 1791, 1892
AvaI	CYCGRG	1 cut(s)	293
AvaII	GGWCC	1 cut(s)	937
BaeGI	GKGCMC	2 cut(s)	150, 536
BaeI	ACNNNNGTAYC	4 cut(s)	358, 391, 1829, 1862
BalI	TGGCCA	1 cut(s)	1395
BanI	GGYRCC	2 cut(s)	589, 1382
BanII	GRGCYC	2 cut(s)	536, 957
BarI	GAAGNNNNNNTAC	4 cut(s)	72, 104, 1857, 1889
BbsI	GAAGAC	2 cut(s)	186, 804
Bbv12I	GWGCWC	1 cut(s)	957
BbvI	GCAGC	6 cut(s)	435, 460, 463, 919, 1473, 1776
BccI	CCATC	8 cut(s)	193, 503, 580, 811, 917, 1354, 1373, 1486
BciT130I	CCWGG	6 cut(s)	111, 594, 1166, 1413, 1483, 1758
BcnI	CCSGG	1 cut(s)	176
BcoDI	GTCTC	3 cut(s)	743, 1246, 1471
BfaI	CTAG	3 cut(s)	224, 407, 1073
BfoI	RGCGCY	1 cut(s)	449
BfuAI	ACCTGC	1 cut(s)	308
BisI	GCNGC	7 cut(s)	449, 474, 477, 908, 911, 1487, 1790
BlsI	GCNGC	7 cut(s)	450, 475, 478, 909, 912, 1488, 1791
Bme1390I	CCNGG	7 cut(s)	111, 176, 594, 1166, 1413, 1483, 1758
Bme18I	GGWCC	1 cut(s)	937
BmeT110I	CYCGRG	1 cut(s)	293
BmgT120I	GGNCC	3 cut(s)	532, 533, 937
BmiI	GGNNCC	8 cut(s)	115, 533, 534, 591, 780, 939, 1384, 1857
BmrFI	CCNGG	7 cut(s)	111, 176, 594, 1166, 1413, 1483, 1758
BmrI	ACTGGG	1 cut(s)	861
BmsI	GCATC	5 cut(s)	123, 338, 1011, 1327, 1805
BmuI	ACTGGG	1 cut(s)	861
BpiI	GAAGAC	2 cut(s)	186, 804
BplI	GAGNNNNNCTC	4 cut(s)	1585, 1617, 1675, 1707
BpmI	CTGGAG	1 cut(s)	738
Bpu10I	CCTNAGC	1 cut(s)	480
BpuMI	CCSGG	1 cut(s)	176
BsaAI	YACGTR	1 cut(s)	1877
BsaI	GGTCTC	1 cut(s)	1246
BsaJI	CCNNGG	4 cut(s)	174, 1412, 1756, 1841
BsaXI	ACNNNNNCTCC	1 cut(s)	1878
Bsc4I	CCNNNNNNNGG	6 cut(s)	110, 384, 946, 1171, 1606, 1680
Bse1I	ACTGG	4 cut(s)	427, 635, 737, 856
Bse3DI	GCAATG	1 cut(s)	1558
BseBI	CCWGG	6 cut(s)	111, 594, 1166, 1413, 1483, 1758
BseDI	CCNNGG	4 cut(s)	174, 1412, 1756, 1841
BseLI	CCNNNNNNNGG	6 cut(s)	110, 384, 946, 1171, 1606, 1680
BseMI	GCAATG	1 cut(s)	1558
BseMII	CTCAG	4 cut(s)	692, 711, 1706, 1743
BseNI	ACTGG	4 cut(s)	427, 635, 737, 856
BseRI	GAGGAG	6 cut(s)	761, 1208, 1232, 1235, 1383, 1663
BseSI	GKGCMC	2 cut(s)	150, 536
BseXI	GCAGC	6 cut(s)	435, 460, 463, 919, 1473, 1776
BshFI	GGCC	3 cut(s)	534, 1395, 1702
BshNI	GGYRCC	2 cut(s)	589, 1382
BsiHKAI	GWGCWC	1 cut(s)	957
BsiHKCI	CYCGRG	1 cut(s)	293
BsiSI	CCGG	2 cut(s)	176, 1247
BslFI	GGGAC	2 cut(s)	605, 1598
BslI	CCNNNNNNNGG	6 cut(s)	110, 384, 946, 1171, 1606, 1680
BsmAI	GTCTC	3 cut(s)	743, 1246, 1471
BsmBI	CGTCTC	1 cut(s)	1471
BsmFI	GGGAC	2 cut(s)	605, 1598
BsmI	GAATGC	2 cut(s)	345, 1445
BsnI	GGCC	3 cut(s)	534, 1395, 1702
Bso31I	GGTCTC	1 cut(s)	1246
BsoBI	CYCGRG	1 cut(s)	293
Bsp120I	GGGCCC	1 cut(s)	532
Bsp1286I	GDGCHC	3 cut(s)	150, 536, 957
Bsp143I	GATC	7 cut(s)	220, 270, 544, 790, 826, 1372, 1418
Bsp19I	CCATGG	1 cut(s)	1841
BspACI	CCGC	7 cut(s)	235, 351, 455, 856, 911, 950, 962
BspANI	GGCC	3 cut(s)	534, 1395, 1702
BspCNI	CTCAG	4 cut(s)	693, 712, 1705, 1742
BspLI	GGNNCC	8 cut(s)	115, 533, 534, 591, 780, 939, 1384, 1857
BspMI	ACCTGC	1 cut(s)	308
BspPI	GGATC	4 cut(s)	278, 539, 785, 821
BspT107I	GGYRCC	2 cut(s)	589, 1382
BspTNI	GGTCTC	1 cut(s)	1246
BsrDI	GCAATG	1 cut(s)	1558
BsrI	ACTGG	4 cut(s)	427, 635, 737, 856
BssECI	CCNNGG	4 cut(s)	174, 1412, 1756, 1841
BssMI	GATC	7 cut(s)	220, 270, 544, 790, 826, 1372, 1418
BssT1I	CCWWGG	1 cut(s)	1841
Bst2UI	CCWGG	6 cut(s)	111, 594, 1166, 1413, 1483, 1758
Bst4CI	ACNGT	5 cut(s)	1161, 1240, 1494, 1582, 1820
Bst6I	CTCTTC	8 cut(s)	519, 924, 1083, 1088, 1164, 1293, 1302, 1308
BstBAI	YACGTR	1 cut(s)	1877
BstC8I	GCNNGC	5 cut(s)	138, 404, 453, 1055, 1794
BstDEI	CTNAG	5 cut(s)	480, 701, 720, 1692, 1729
BstDSI	CCRYGG	1 cut(s)	1841
BstENI	CCTNNNNNAGG	3 cut(s)	108, 1169, 1678
BstH2I	RGCGCY	1 cut(s)	449
BstHHI	GCGC	1 cut(s)	448
BstKTI	GATC	7 cut(s)	223, 273, 547, 793, 829, 1375, 1421
BstMAI	GTCTC	3 cut(s)	743, 1246, 1471
BstMBI	GATC	7 cut(s)	220, 270, 544, 790, 826, 1372, 1418
BstMWI	GCNNNNNNNGC	7 cut(s)	452, 461, 470, 482, 721, 961, 1693
BstNI	CCWGG	6 cut(s)	111, 594, 1166, 1413, 1483, 1758
BstNSI	RCATGY	4 cut(s)	335, 455, 1053, 1796
BstSCI	CCNGG	7 cut(s)	109, 174, 592, 1164, 1411, 1481, 1756
BstSLI	GKGCMC	2 cut(s)	150, 536
BstV1I	GCAGC	6 cut(s)	435, 460, 463, 919, 1473, 1776
BstV2I	GAAGAC	2 cut(s)	186, 804
BstX2I	RGATCY	1 cut(s)	826
BstXI	CCANNNNNNTGG	1 cut(s)	14
BstYI	RGATCY	1 cut(s)	826
BsuRI	GGCC	3 cut(s)	534, 1395, 1702
BtgI	CCRYGG	1 cut(s)	1841
BtsI	GCAGTG	1 cut(s)	1044
BtsIMutI	CAGTG	4 cut(s)	329, 698, 1044, 1596
BveI	ACCTGC	1 cut(s)	308
Cac8I	GCNNGC	5 cut(s)	138, 404, 453, 1055, 1794
CaiI	CAGNNNCTG	1 cut(s)	788
CfoI	GCGC	1 cut(s)	448
Cfr13I	GGNCC	3 cut(s)	532, 533, 937
Csp6I	GTAC	2 cut(s)	375, 1383
CviQI	GTAC	2 cut(s)	375, 1383
DdeI	CTNAG	5 cut(s)	480, 701, 720, 1692, 1729
DpnI	GATC	7 cut(s)	222, 272, 546, 792, 828, 1374, 1420
DpnII	GATC	7 cut(s)	220, 270, 544, 790, 826, 1372, 1418
EaeI	YGGCCR	1 cut(s)	1393
Eam1104I	CTCTTC	8 cut(s)	519, 924, 1083, 1088, 1164, 1293, 1302, 1308
EarI	CTCTTC	8 cut(s)	519, 924, 1083, 1088, 1164, 1293, 1302, 1308
EciI	GGCGGA	1 cut(s)	965
Ecl136II	GAGCTC	1 cut(s)	955
Eco130I	CCWWGG	1 cut(s)	1841
Eco24I	GRGCYC	2 cut(s)	536, 957
Eco31I	GGTCTC	1 cut(s)	1246
Eco32I	GATATC	1 cut(s)	308
Eco47I	GGWCC	1 cut(s)	937
Eco47III	AGCGCT	1 cut(s)	447
Eco53kI	GAGCTC	1 cut(s)	955
Eco57I	CTGAAG	4 cut(s)	162, 816, 843, 1107
Eco88I	CYCGRG	1 cut(s)	293
EcoICRI	GAGCTC	1 cut(s)	955
EcoNI	CCTNNNNNAGG	3 cut(s)	108, 1169, 1678
EcoO109I	RGGNCCY	1 cut(s)	532
EcoRII	CCWGG	6 cut(s)	109, 592, 1164, 1411, 1481, 1756
EcoRV	GATATC	1 cut(s)	308
EcoT14I	CCWWGG	1 cut(s)	1841
EcoT22I	ATGCAT	2 cut(s)	345, 1798
EcoT38I	GRGCYC	2 cut(s)	536, 957
ErhI	CCWWGG	1 cut(s)	1841
Esp3I	CGTCTC	1 cut(s)	1471
FalI	AAGNNNNNCTT	2 cut(s)	816, 848
FaqI	GGGAC	2 cut(s)	605, 1598
FauI	CCCGC	1 cut(s)	448
FauNDI	CATATG	1 cut(s)	640
Fnu4HI	GCNGC	7 cut(s)	449, 474, 477, 908, 911, 1487, 1790
FriOI	GRGCYC	2 cut(s)	536, 957
Fsp4HI	GCNGC	7 cut(s)	449, 474, 477, 908, 911, 1487, 1790
FspBI	CTAG	3 cut(s)	224, 407, 1073
GlaI	GCGC	1 cut(s)	447
GluI	GCNGC	7 cut(s)	449, 474, 477, 908, 911, 1487, 1790
GsuI	CTGGAG	1 cut(s)	738
HaeII	RGCGCY	1 cut(s)	449
HaeIII	GGCC	3 cut(s)	534, 1395, 1702
HapII	CCGG	2 cut(s)	176, 1247
HhaI	GCGC	1 cut(s)	448
Hin6I	GCGC	1 cut(s)	446
HinP1I	GCGC	1 cut(s)	446
HincII	GTYRAC	3 cut(s)	85, 367, 772
HindII	GTYRAC	3 cut(s)	85, 367, 772
HindIII	AAGCTT	2 cut(s)	119, 809
HinfI	GANTC	4 cut(s)	751, 1474, 1586, 1811
HpaI	GTTAAC	1 cut(s)	772
HpaII	CCGG	2 cut(s)	176, 1247
HphI	GGTGA	4 cut(s)	50, 1010, 1791, 1892
Hpy166II	GTNNAC	6 cut(s)	85, 367, 499, 772, 937, 1624
Hpy188I	TCNGA	5 cut(s)	241, 275, 489, 721, 1816
Hpy188III	TCNNGA	7 cut(s)	22, 159, 209, 295, 755, 794, 1376
Hpy8I	GTNNAC	6 cut(s)	85, 367, 499, 772, 937, 1624
HpyAV	CCTTC	8 cut(s)	29, 137, 694, 726, 848, 968, 1393, 1713
HpyCH4III	ACNGT	5 cut(s)	1161, 1240, 1494, 1582, 1820
HpyCH4IV	ACGT	1 cut(s)	1876
HpyF10VI	GCNNNNNNNGC	7 cut(s)	452, 461, 470, 482, 721, 961, 1693
HpyF3I	CTNAG	5 cut(s)	480, 701, 720, 1692, 1729
HpySE526I	ACGT	1 cut(s)	1876
HspAI	GCGC	1 cut(s)	446
KpnI	GGTACC	1 cut(s)	1386
KspAI	GTTAAC	1 cut(s)	772
Kzo9I	GATC	7 cut(s)	220, 270, 544, 790, 826, 1372, 1418
LmnI	GCTCC	4 cut(s)	700, 952, 960, 1855
Lsp1109I	GCAGC	6 cut(s)	435, 460, 463, 919, 1473, 1776
LweI	GCATC	5 cut(s)	123, 338, 1011, 1327, 1805
MaeI	CTAG	3 cut(s)	224, 407, 1073
MaeII	ACGT	1 cut(s)	1876
MaeIII	GTNAC	2 cut(s)	998, 1403
MalI	GATC	7 cut(s)	222, 272, 546, 792, 828, 1374, 1420
MboI	GATC	7 cut(s)	220, 270, 544, 790, 826, 1372, 1418
MfeI	CAATTG	1 cut(s)	1293
MflI	RGATCY	1 cut(s)	826
MhlI	GDGCHC	3 cut(s)	150, 536, 957
MlsI	TGGCCA	1 cut(s)	1395
MluCI	AATT	6 cut(s)	243, 608, 758, 1121, 1176, 1293
MluNI	TGGCCA	1 cut(s)	1395
MlyI	GAGTC	2 cut(s)	745, 1820
MmeI	TCCRAC	2 cut(s)	174, 1794
Mox20I	TGGCCA	1 cut(s)	1395
Mph1103I	ATGCAT	2 cut(s)	345, 1798
MroXI	GAANNNNTTC	2 cut(s)	45, 683
MscI	TGGCCA	1 cut(s)	1395
MseI	TTAA	3 cut(s)	771, 860, 1903
Msp20I	TGGCCA	1 cut(s)	1395
MspA1I	CMGCKG	1 cut(s)	1696
MspI	CCGG	2 cut(s)	176, 1247
MspR9I	CCNGG	7 cut(s)	111, 176, 594, 1166, 1413, 1483, 1758
MunI	CAATTG	1 cut(s)	1293
Mva1269I	GAATGC	2 cut(s)	345, 1445
MvaI	CCWGG	6 cut(s)	111, 594, 1166, 1413, 1483, 1758
MwoI	GCNNNNNNNGC	7 cut(s)	452, 461, 470, 482, 721, 961, 1693
NciI	CCSGG	1 cut(s)	176
NcoI	CCATGG	1 cut(s)	1841
NdeI	CATATG	1 cut(s)	640
NdeII	GATC	7 cut(s)	220, 270, 544, 790, 826, 1372, 1418
NlaIV	GGNNCC	8 cut(s)	115, 533, 534, 591, 780, 939, 1384, 1857
NmuCI	GTSAC	1 cut(s)	998
NsiI	ATGCAT	2 cut(s)	345, 1798
NspI	RCATGY	4 cut(s)	335, 455, 1053, 1796
PaeI	GCATGC	2 cut(s)	455, 1796
PaeR7I	CTCGAG	1 cut(s)	293
PctI	GAATGC	2 cut(s)	345, 1445
PdmI	GAANNNNTTC	2 cut(s)	45, 683
PfeI	GAWTC	2 cut(s)	1474, 1586
PkrI	GCNGC	7 cut(s)	450, 475, 478, 909, 912, 1488, 1791
PleI	GAGTC	2 cut(s)	745, 1819
PpsI	GAGTC	2 cut(s)	745, 1819
Ppu21I	YACGTR	1 cut(s)	1877
Psp124BI	GAGCTC	1 cut(s)	957
Psp6I	CCWGG	6 cut(s)	109, 592, 1164, 1411, 1481, 1756
PspGI	CCWGG	6 cut(s)	109, 592, 1164, 1411, 1481, 1756
PspN4I	GGNNCC	8 cut(s)	115, 533, 534, 591, 780, 939, 1384, 1857
PspOMI	GGGCCC	1 cut(s)	532
PspPI	GGNCC	3 cut(s)	532, 533, 937
PstNI	CAGNNNCTG	1 cut(s)	788
PsuI	RGATCY	1 cut(s)	826
PvuII	CAGCTG	1 cut(s)	1696
RsaI	GTAC	2 cut(s)	376, 1384
RsaNI	GTAC	2 cut(s)	375, 1383
SacI	GAGCTC	1 cut(s)	957
SaqAI	TTAA	3 cut(s)	771, 860, 1903
SatI	GCNGC	7 cut(s)	449, 474, 477, 908, 911, 1487, 1790
Sau3AI	GATC	7 cut(s)	220, 270, 544, 790, 826, 1372, 1418
Sau96I	GGNCC	3 cut(s)	532, 533, 937
SchI	GAGTC	2 cut(s)	745, 1820
ScrFI	CCNGG	7 cut(s)	111, 176, 594, 1166, 1413, 1483, 1758
SduI	GDGCHC	3 cut(s)	150, 536, 957
SfaNI	GCATC	5 cut(s)	123, 338, 1011, 1327, 1805
Sfr274I	CTCGAG	1 cut(s)	293
SinI	GGWCC	1 cut(s)	937
SlaI	CTCGAG	1 cut(s)	293
SmlI	CTYRAG	1 cut(s)	293
SmoI	CTYRAG	1 cut(s)	293
SphI	GCATGC	2 cut(s)	455, 1796
Sse9I	AATT	6 cut(s)	243, 608, 758, 1121, 1176, 1293
SsiI	CCGC	7 cut(s)	235, 351, 455, 856, 911, 950, 962
SspMI	CTAG	3 cut(s)	224, 407, 1073
SstI	GAGCTC	1 cut(s)	957
StyD4I	CCNGG	7 cut(s)	109, 174, 592, 1164, 1411, 1481, 1756
StyI	CCWWGG	1 cut(s)	1841
TaaI	ACNGT	5 cut(s)	1161, 1240, 1494, 1582, 1820
TaiI	ACGT	1 cut(s)	1879
TaqI	TCGA	3 cut(s)	294, 304, 873
TasI	AATT	6 cut(s)	243, 608, 758, 1121, 1176, 1293
TauI	GCSGC	1 cut(s)	913
TfiI	GAWTC	2 cut(s)	1474, 1586
Tru1I	TTAA	3 cut(s)	771, 860, 1903
Tru9I	TTAA	3 cut(s)	771, 860, 1903
TscAI	CASTG	4 cut(s)	329, 705, 1044, 1596
TseFI	GTSAC	1 cut(s)	998
TseI	GCWGC	6 cut(s)	448, 473, 476, 907, 1486, 1789
Tsp45I	GTSAC	1 cut(s)	998
TspGWI	ACGGA	1 cut(s)	1593
TspRI	CASTG	4 cut(s)	329, 705, 1044, 1596
VpaK11BI	GGWCC	1 cut(s)	937
XagI	CCTNNNNNAGG	3 cut(s)	108, 1169, 1678
XapI	RAATTY	2 cut(s)	243, 758
XceI	RCATGY	4 cut(s)	335, 455, 1053, 1796
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1438
XhoI	CTCGAG	1 cut(s)	293
XmnI	GAANNNNTTC	2 cut(s)	45, 683
XspI	CTAG	3 cut(s)	224, 407, 1073
Zsp2I	ATGCAT	2 cut(s)	345, 1798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.