MD11G1157100.v1.1

MORN repeat

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
15123005 .. 15127001
3997 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1157100.v1.1.491

Sequence Viewer

Length: 1509 bp
ATGCAGGGTAGGTTCTATTTTGGGGACTTAGTGGAGGATGATACTGGTTGTGATGAGGATGTATCAGCGCTGCATGCGGGTATTGCAGAAGTGGCTGCTGCTAAGGCTCGGATGTTTGTCAACAAGCCTGATGGAATGGTTAGGGAAGAAATGGGACCTTATGGTGATCCTCAACATCCCTACTTTTATGAAGATGATGATGTTTGGATGGCACCAGGCTTCATAAACCAATTTTATGAAGTACCTGATTATTGGAAAACATATGTGCATGAGGTTGATGAAGAAAGGGAAATGTGGTTGAACTCTTTCTATAAAACTCCACTGAGGATACCCATGCCTGCTGAGCTTGAATACTGGTGGTCAAAGGGTATTAATTTCATCATCCATAGACATACCCCCTTTCCCCCATCTCGCATCCATTTAAAAAAATTTGCTCTGCACATCCACTATTTTTTCGGAGTGCAGAATGTTAGAGATCTTCCGAACATACGAAAAACTCAATTTGATGAACCCTTTTATCTTTCCATTGTAAAATTGAGAGGTGTTACCTGGCCACCTAAGCCACCGCTTCTGAAAGATGGGGAAGAGGTGGACCCAAAAAAGGTGGAGTTCCTTCCCCTTGGTTTTGATGAGTTCTATGGAAGAAATGTTGATGCGAAGAAGAAAAATTTATGGATGCGTGTAGTATCAGCAGTGGAAAATGCATGCAAGCCCATTTTTGAAAATGTAGAGAAATGGACTGAAGAGAAGAGGAAAGCCGGTGAGGTGAAGTTGAAGTTGATTGAAAAAGAACTTGAACTTGTAGAGGCTGAGTTGTGCCTCGAAGAGGTAATTGAGGATGTGGATGGGGAGTTAAAGAGGAGAGAGAAAGAGGAGGAGAAGGTCGAAATGGGTTTGCAGGAGGAAGAAGATACTTCTGCTGCATCGGCTAAGCAAGATGAGAAACCCTTAGTTGAAGAGGATGAAGATGAAGAGGAAGAGGAAGATGAAGATGAGGATGATGTTGCGCCATCAAGTTTTGGTTCTGCAACTGCAGATCAAGATGCAACTAAAAATGGCCAGAGGGGAAACAACCTGGTTCCATCCAGGTTACAACGATCATTTTTTACTTGGAAAAAGAGTACAGCAATGCCGAACGCAACTATTCCCTCATGCAATGACGACTCTAGTTGCCTCTCAGCTGTTTCAGTCAGTTTCCCTCCGGTGGTTGGTCGAAAAGTAAACTTGAAAGCCACTAGTCAAAGACAGTTGAACTTCGAAGCCAAAAACTTCTCAAATGGGAGGTTATGTCGGATACGGCCAATATCTCAATTATGCTCACCTCATTCAACATCCATGGATACCAGAATAAGCTCAGAAGAGATGAGATCAAGAAAACATAGTTGGCCGCATGTAGCACAAGGGACGGAATCATGTAGCGTTTTGTCTCTCCACACCCCGGTGTATTGTTTGAACTCTTATGAAGAAACTATACATGGCAAACCGCAACTATCTTCCAAGTTAACATAA

Protein Analysis

503

Amino Acids

57.68

Weight (kDa)

5.0

Isoelectric Point (pI)

53.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 211
AciI CCGC 4 cut(s) 77, 566, 1388, 1484
AclWI GGATC 1 cut(s) 161
AcoI YGGCCR 4 cut(s) 551, 1057, 1298, 1385
AcsI RAATTY 2 cut(s) 428, 667
AcuI CTGAAG 1 cut(s) 762
AfaI GTAC 2 cut(s) 243, 1123
AfeI AGCGCT 1 cut(s) 69
AfiI CCNNNNNNNGG 5 cut(s) 601, 826, 1204, 1208, 1438
AhlI ACTAGT 1 cut(s) 1235
AjnI CCWGG 4 cut(s) 214, 548, 1074, 1085
AjuI GAANNNNNNNTTGG 2 cut(s) 1366, 1398
AleI CACNNNNGTG 1 cut(s) 1439
AluBI AGCT 3 cut(s) 346, 1181, 1353
AluI AGCT 3 cut(s) 346, 1181, 1353
Alw26I GTCTC 1 cut(s) 1431
AlwI GGATC 1 cut(s) 161
Aor51HI AGCGCT 1 cut(s) 69
AoxI GGCC 4 cut(s) 551, 1057, 1298, 1385
ApeKI GCWGC 4 cut(s) 70, 95, 98, 920
ApoI RAATTY 2 cut(s) 428, 667
AseI ATTAAT 1 cut(s) 372
Asp700I GAANNNNTTC 1 cut(s) 305
AspLEI GCGC 2 cut(s) 70, 1009
AspS9I GGNCC 2 cut(s) 155, 592
AsuC2I CCSGG 1 cut(s) 1439
AsuHPI GGTGA 4 cut(s) 176, 773, 778, 1311
AsuII TTCGAA 1 cut(s) 1257
AvaII GGWCC 2 cut(s) 155, 592
BalI TGGCCA 2 cut(s) 553, 1059
BanI GGYRCC 1 cut(s) 211
BarI GAAGNNNNNNTAC 2 cut(s) 1455, 1487
BbvI GCAGC 4 cut(s) 57, 82, 85, 907
BccI CCATC 7 cut(s) 125, 202, 415, 572, 839, 1018, 1090
BceAI ACGGC 1 cut(s) 1313
BciT130I CCWGG 4 cut(s) 216, 550, 1076, 1087
BciVI GTATCC 3 cut(s) 321, 1287, 1333
BcnI CCSGG 1 cut(s) 1439
BcoDI GTCTC 1 cut(s) 1431
BcuI ACTAGT 1 cut(s) 1235
BfaI CTAG 2 cut(s) 1167, 1236
BfmI CTRYAG 1 cut(s) 1032
BfoI RGCGCY 1 cut(s) 71
BfuI GTATCC 3 cut(s) 321, 1287, 1333
BglII AGATCT 1 cut(s) 475
BisI GCNGC 5 cut(s) 71, 96, 99, 921, 1388
BlpI GCTNAGC 2 cut(s) 342, 930
BlsI GCNGC 5 cut(s) 72, 97, 100, 922, 1389
Bme1390I CCNGG 5 cut(s) 216, 550, 1076, 1087, 1439
Bme18I GGWCC 2 cut(s) 155, 592
BmgT120I GGNCC 2 cut(s) 155, 592
BmiI GGNNCC 4 cut(s) 156, 213, 594, 1080
BmrFI CCNGG 5 cut(s) 216, 550, 1076, 1087, 1439
BmsI GCATC 5 cut(s) 423, 643, 666, 932, 1033
Bpu10I CCTNAGC 2 cut(s) 102, 558
Bpu1102I GCTNAGC 2 cut(s) 342, 930
Bpu14I TTCGAA 1 cut(s) 1257
BpuMI CCSGG 1 cut(s) 1439
BsaJI CCNNGG 3 cut(s) 619, 1335, 1437
BsaWI WCCGGW 1 cut(s) 1201
BsaXI ACNNNNNCTCC 2 cut(s) 1273, 1303
Bsc4I CCNNNNNNNGG 5 cut(s) 601, 826, 1204, 1208, 1438
Bse118I RCCGGY 1 cut(s) 758
Bse1I ACTGG 2 cut(s) 49, 359
Bse3DI GCAATG 2 cut(s) 1134, 1162
BseBI CCWGG 4 cut(s) 216, 550, 1076, 1087
BseDI CCNNGG 3 cut(s) 619, 1335, 1437
BseLI CCNNNNNNNGG 5 cut(s) 601, 826, 1204, 1208, 1438
BseMI GCAATG 2 cut(s) 1134, 1162
BseMII CTCAG 5 cut(s) 314, 333, 801, 1191, 1368
BseNI ACTGG 2 cut(s) 49, 359
BseRI GAGGAG 3 cut(s) 874, 887, 890
BseXI GCAGC 4 cut(s) 57, 82, 85, 907
BsgI GTGCAG 2 cut(s) 422, 482
BshFI GGCC 4 cut(s) 553, 1059, 1300, 1387
BshNI GGYRCC 1 cut(s) 211
BsiSI CCGG 3 cut(s) 759, 1202, 1439
BslFI GGGAC 3 cut(s) 38, 168, 1417
BslI CCNNNNNNNGG 5 cut(s) 601, 826, 1204, 1208, 1438
BsmAI GTCTC 1 cut(s) 1431
BsmFI GGGAC 3 cut(s) 38, 168, 1417
BsnI GGCC 4 cut(s) 553, 1059, 1300, 1387
Bsp119I TTCGAA 1 cut(s) 1257
Bsp143I GATC 5 cut(s) 166, 475, 1036, 1097, 1367
Bsp1720I GCTNAGC 2 cut(s) 342, 930
Bsp19I CCATGG 1 cut(s) 1335
BspACI CCGC 4 cut(s) 77, 566, 1388, 1484
BspANI GGCC 4 cut(s) 553, 1059, 1300, 1387
BspCNI CTCAG 5 cut(s) 315, 334, 802, 1190, 1367
BspLI GGNNCC 4 cut(s) 156, 213, 594, 1080
BspMAI CTGCAG 1 cut(s) 1036
BspPI GGATC 1 cut(s) 161
BspT104I TTCGAA 1 cut(s) 1257
BspT107I GGYRCC 1 cut(s) 211
BsrDI GCAATG 2 cut(s) 1134, 1162
BsrFI RCCGGY 1 cut(s) 758
BsrI ACTGG 2 cut(s) 49, 359
BssAI RCCGGY 1 cut(s) 758
BssECI CCNNGG 3 cut(s) 619, 1335, 1437
BssMI GATC 5 cut(s) 166, 475, 1036, 1097, 1367
BssT1I CCWWGG 2 cut(s) 619, 1335
Bst2UI CCWGG 4 cut(s) 216, 550, 1076, 1087
Bst4CI ACNGT 1 cut(s) 1248
Bst6I CTCTTC 8 cut(s) 579, 738, 743, 819, 951, 966, 972, 1353
BstBI TTCGAA 1 cut(s) 1257
BstC8I GCNNGC 4 cut(s) 75, 339, 706, 710
BstDSI CCRYGG 1 cut(s) 1335
BstENI CCTNNNNNAGG 1 cut(s) 824
BstH2I RGCGCY 1 cut(s) 71
BstHHI GCGC 2 cut(s) 70, 1009
BstKTI GATC 5 cut(s) 169, 478, 1039, 1100, 1370
BstMAI GTCTC 1 cut(s) 1431
BstMBI GATC 5 cut(s) 166, 475, 1036, 1097, 1367
BstMWI GCNNNNNNNGC 7 cut(s) 74, 83, 92, 104, 343, 559, 926
BstNI CCWGG 4 cut(s) 216, 550, 1076, 1087
BstNSI RCATGY 3 cut(s) 77, 708, 1394
BstSCI CCNGG 5 cut(s) 214, 548, 1074, 1085, 1437
BstSFI CTRYAG 1 cut(s) 1032
BstV1I GCAGC 4 cut(s) 57, 82, 85, 907
BstX2I RGATCY 1 cut(s) 475
BstYI RGATCY 1 cut(s) 475
BsuI GTATCC 3 cut(s) 321, 1287, 1333
BsuRI GGCC 4 cut(s) 553, 1059, 1300, 1387
BtgI CCRYGG 1 cut(s) 1335
BtsI GCAGTG 1 cut(s) 699
BtsIMutI CAGTG 2 cut(s) 320, 699
Cac8I GCNNGC 4 cut(s) 75, 339, 706, 710
CfoI GCGC 2 cut(s) 70, 1009
Cfr10I RCCGGY 1 cut(s) 758
Cfr13I GGNCC 2 cut(s) 155, 592
CsiI ACCWGGT 1 cut(s) 1074
Csp6I GTAC 2 cut(s) 242, 1122
CspCI CAANNNNNGTGG 2 cut(s) 585, 620
CviAII CATG 9 cut(s) 74, 269, 334, 705, 1152, 1336, 1391, 1413, 1475
CviQI GTAC 2 cut(s) 242, 1122
DpnI GATC 5 cut(s) 168, 477, 1038, 1099, 1369
DpnII GATC 5 cut(s) 166, 475, 1036, 1097, 1367
DraI TTTAAA 1 cut(s) 423
EaeI YGGCCR 4 cut(s) 551, 1057, 1298, 1385
Eam1104I CTCTTC 8 cut(s) 579, 738, 743, 819, 951, 966, 972, 1353
EarI CTCTTC 8 cut(s) 579, 738, 743, 819, 951, 966, 972, 1353
Eco130I CCWWGG 2 cut(s) 619, 1335
Eco47I GGWCC 2 cut(s) 155, 592
Eco47III AGCGCT 1 cut(s) 69
Eco57I CTGAAG 1 cut(s) 762
EcoNI CCTNNNNNAGG 1 cut(s) 824
EcoO109I RGGNCCY 1 cut(s) 155
EcoRII CCWGG 4 cut(s) 214, 548, 1074, 1085
EcoT14I CCWWGG 2 cut(s) 619, 1335
EcoT22I ATGCAT 1 cut(s) 706
ErhI CCWWGG 2 cut(s) 619, 1335
FaeI CATG 9 cut(s) 77, 272, 337, 708, 1155, 1339, 1394, 1416, 1478
FaqI GGGAC 3 cut(s) 38, 168, 1417
FatI CATG 9 cut(s) 73, 268, 333, 704, 1151, 1335, 1390, 1412, 1474
FauI CCCGC 1 cut(s) 70
FauNDI CATATG 1 cut(s) 262
Fnu4HI GCNGC 5 cut(s) 71, 96, 99, 921, 1388
Fsp4HI GCNGC 5 cut(s) 71, 96, 99, 921, 1388
FspBI CTAG 2 cut(s) 1167, 1236
GlaI GCGC 2 cut(s) 69, 1008
GluI GCNGC 5 cut(s) 71, 96, 99, 921, 1388
HaeII RGCGCY 1 cut(s) 71
HaeIII GGCC 4 cut(s) 553, 1059, 1300, 1387
HapII CCGG 3 cut(s) 759, 1202, 1439
HhaI GCGC 2 cut(s) 70, 1009
Hin1II CATG 9 cut(s) 77, 272, 337, 708, 1155, 1339, 1394, 1416, 1478
Hin6I GCGC 2 cut(s) 68, 1007
HinP1I GCGC 2 cut(s) 68, 1007
HincII GTYRAC 2 cut(s) 121, 1503
HindII GTYRAC 2 cut(s) 121, 1503
HinfI GANTC 2 cut(s) 1163, 1409
HpaI GTTAAC 1 cut(s) 1503
HpaII CCGG 3 cut(s) 759, 1202, 1439
HphI GGTGA 4 cut(s) 176, 773, 778, 1311
Hpy166II GTNNAC 4 cut(s) 121, 592, 1222, 1503
Hpy188I TCNGA 6 cut(s) 111, 458, 483, 573, 1293, 1357
Hpy188III TCNNGA 2 cut(s) 1040, 1371
Hpy8I GTNNAC 4 cut(s) 121, 592, 1222, 1503
HpyAV CCTTC 2 cut(s) 623, 874
HpyCH4III ACNGT 1 cut(s) 1248
HpyF10VI GCNNNNNNNGC 7 cut(s) 74, 83, 92, 104, 343, 559, 926
Hsp92II CATG 9 cut(s) 77, 272, 337, 708, 1155, 1339, 1394, 1416, 1478
HspAI GCGC 2 cut(s) 68, 1007
KspAI GTTAAC 1 cut(s) 1503
Kzo9I GATC 5 cut(s) 166, 475, 1036, 1097, 1367
Lsp1109I GCAGC 4 cut(s) 57, 82, 85, 907
LweI GCATC 5 cut(s) 423, 643, 666, 932, 1033
MabI ACCWGGT 1 cut(s) 1074
MaeI CTAG 2 cut(s) 1167, 1236
MaeIII GTNAC 2 cut(s) 544, 1089
MalI GATC 5 cut(s) 168, 477, 1038, 1099, 1369
MboI GATC 5 cut(s) 166, 475, 1036, 1097, 1367
MflI RGATCY 1 cut(s) 475
MlsI TGGCCA 2 cut(s) 553, 1059
MluCI AATT 8 cut(s) 230, 373, 428, 500, 533, 667, 831, 1310
MluNI TGGCCA 2 cut(s) 553, 1059
MlyI GAGTC 1 cut(s) 1157
MmeI TCCRAC 1 cut(s) 1271
Mox20I TGGCCA 2 cut(s) 553, 1059
Mph1103I ATGCAT 1 cut(s) 706
MroXI GAANNNNTTC 1 cut(s) 305
MscI TGGCCA 2 cut(s) 553, 1059
MseI TTAA 4 cut(s) 372, 422, 854, 1502
MslI CAYNNNNRTG 1 cut(s) 1439
Msp20I TGGCCA 2 cut(s) 553, 1059
MspA1I CMGCKG 1 cut(s) 1181
MspI CCGG 3 cut(s) 759, 1202, 1439
MspR9I CCNGG 5 cut(s) 216, 550, 1076, 1087, 1439
MvaI CCWGG 4 cut(s) 216, 550, 1076, 1087
MwoI GCNNNNNNNGC 7 cut(s) 74, 83, 92, 104, 343, 559, 926
NciI CCSGG 1 cut(s) 1439
NcoI CCATGG 1 cut(s) 1335
NdeI CATATG 1 cut(s) 262
NdeII GATC 5 cut(s) 166, 475, 1036, 1097, 1367
NlaIII CATG 9 cut(s) 77, 272, 337, 708, 1155, 1339, 1394, 1416, 1478
NlaIV GGNNCC 4 cut(s) 156, 213, 594, 1080
NsiI ATGCAT 1 cut(s) 706
NspI RCATGY 3 cut(s) 77, 708, 1394
NspV TTCGAA 1 cut(s) 1257
OliI CACNNNNGTG 1 cut(s) 1439
PaeI GCATGC 2 cut(s) 77, 708
PdmI GAANNNNTTC 1 cut(s) 305
PfeI GAWTC 1 cut(s) 1409
PkrI GCNGC 5 cut(s) 72, 97, 100, 922, 1389
PleI GAGTC 1 cut(s) 1157
PpsI GAGTC 1 cut(s) 1157
PpuMI RGGWCCY 1 cut(s) 155
PshBI ATTAAT 1 cut(s) 372
Psp5II RGGWCCY 1 cut(s) 155
Psp6I CCWGG 4 cut(s) 214, 548, 1074, 1085
PspGI CCWGG 4 cut(s) 214, 548, 1074, 1085
PspN4I GGNNCC 4 cut(s) 156, 213, 594, 1080
PspPI GGNCC 2 cut(s) 155, 592
PspPPI RGGWCCY 1 cut(s) 155
PstI CTGCAG 1 cut(s) 1036
PsuI RGATCY 1 cut(s) 475
PvuII CAGCTG 1 cut(s) 1181
RsaI GTAC 2 cut(s) 243, 1123
RsaNI GTAC 2 cut(s) 242, 1122
RseI CAYNNNNRTG 1 cut(s) 1439
SaqAI TTAA 4 cut(s) 372, 422, 854, 1502
SatI GCNGC 5 cut(s) 71, 96, 99, 921, 1388
Sau3AI GATC 5 cut(s) 166, 475, 1036, 1097, 1367
Sau96I GGNCC 2 cut(s) 155, 592
SchI GAGTC 1 cut(s) 1157
ScrFI CCNGG 5 cut(s) 216, 550, 1076, 1087, 1439
SexAI ACCWGGT 1 cut(s) 1074
SfaNI GCATC 5 cut(s) 423, 643, 666, 932, 1033
SfcI CTRYAG 1 cut(s) 1032
SfuI TTCGAA 1 cut(s) 1257
SinI GGWCC 2 cut(s) 155, 592
SmiMI CAYNNNNRTG 1 cut(s) 1439
SpeI ACTAGT 1 cut(s) 1235
SphI GCATGC 2 cut(s) 77, 708
Sse9I AATT 8 cut(s) 230, 373, 428, 500, 533, 667, 831, 1310
SsiI CCGC 4 cut(s) 77, 566, 1388, 1484
SspMI CTAG 2 cut(s) 1167, 1236
StyD4I CCNGG 5 cut(s) 214, 548, 1074, 1085, 1437
StyI CCWWGG 2 cut(s) 619, 1335
TaaI ACNGT 1 cut(s) 1248
TaqI TCGA 4 cut(s) 822, 885, 1213, 1257
TasI AATT 8 cut(s) 230, 373, 428, 500, 533, 667, 831, 1310
TatI WGTACW 1 cut(s) 1121
TauI GCSGC 1 cut(s) 1390
TfiI GAWTC 1 cut(s) 1409
Tru1I TTAA 4 cut(s) 372, 422, 854, 1502
Tru9I TTAA 4 cut(s) 372, 422, 854, 1502
TscAI CASTG 2 cut(s) 327, 699
TseI GCWGC 4 cut(s) 70, 95, 98, 920
TspGWI ACGGA 1 cut(s) 1421
TspRI CASTG 2 cut(s) 327, 699
VpaK11BI GGWCC 2 cut(s) 155, 592
VspI ATTAAT 1 cut(s) 372
XagI CCTNNNNNAGG 1 cut(s) 824
XapI RAATTY 2 cut(s) 428, 667
XceI RCATGY 3 cut(s) 77, 708, 1394
XmnI GAANNNNTTC 1 cut(s) 305
XspI CTAG 2 cut(s) 1167, 1236
Zsp2I ATGCAT 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.