Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0006193

Physical Location & Seq

Genomic Coordinates Forward (+)

31312135 .. 31320267

Gene Structure 8133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00025050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGCCAGACCAAGACTCCCCAAACCCCACTGAATCCCAGCTCACCGCTCAAGAACCCGACCCGGATGGCCTCTCCTCCTCCGACTCCGAGCCCGACTACGATTCCGACGAGTCCTCCGTCTACGAAGGCGAGGGCGGTAACGCCGGTAATGGTGAAGTGGACGAAGCGCTCAATTTGCTCCGGCCCGGAGAGGACATACCGGAGGACGAGAACGCTCCCGAGGTGAATGTGAAGCTGTTCAATCAGGTGTTACAGGGGAAGAGAGTGAGGAGGAGGCAGGAGGAGGAGGACAGGGGGTATGTGTTCTACGAGGACCTGTTTGATTTCCCGGAGGACCCAGAGAAATGGCGGGAGGAGGATTTGAAGGAGCTCTGGGGTGATGCGCCCTTGGATATGACCAAACCCGGTTGGGACCCGGTTTGGGCTGATGAGGAGGAGTGGGAGATTGTTAAGGATGAGATTAAGGCCGGCAATGACCCGCCCATTGCTCCCTTTTATGTTCCCTACCGGAAGCCTTATCCGGCCATACCTGAAGATCATTATGACATTTCCAATCCCAAGGCTGTGATTGAAGAGTTGGATAGGATTGAGGAGTTTCTCAGATGGGTCAGCTATGTTTTCCCTGACGGCAGCTCGTATGAGGGCACCGTGTGGGATGACTTGGCTCATGGCAAAGGAGTCTACGTTGCTGAACAGGGACTCGTCAGGTATGAAGGTGAATGGCTTCAAAACAACATGGAGGGTCATGGGGTTGTTGAAGTTGACATACCTGACATAGAGCCTATTCCAGGTTCCAAGCTTGAAGCACAGATGCGTGCTGAAGGGCACATAATATCAAGAGATTATATGACCCCGGAAGACAAAGAATGGTTGGAGATGGATATTCAAGACAGCATTGATCTAGCAGGGGGCGGTCTGAAATTCCTTTTTATGAAAAAGATGAATGGATCAGACATTTTGGGAGGAAACCGTCAGTGGAAACATGCCAGAATGCATGGATGCGGAGTATATGAAGTCAACGAGCGTACCATATATGGGAGGTTCTACTTTGGCGAGCTACTGGAGGATGATACTGGTTGTGATGAGGATGTATCAGCGCTGCATGCAGGTATTGCAGAAGTGGCTGCTGCTAAGGCTCGGATGTTTGTGAACAAGCCTGATGGAATGGTTAGGGAAGAGAGGGGCCCGTATAGTGATCCTCAACATCCCTATTTCTATGAAGATGAAGATGTTTGGATGGCACCAGGCTTCATAAACCAATTCTATGAAGTCCCTGATTACTGGAAAACATATGTGCATGAGGTCGATGAGGAAAGGGAAATGTGGTTGAACTCCTTCTATAAAGCTCCACTGAGAATACCTATGCCTTCTGAGCTTGAATACTGGTGGTCAAAGGAGGAGACTCCAGAATTTATTGTTGTTAACAAGGAACCAGAGCCTGATCCTGAAGACCCATCAAAGCTTATATATACTGAAGATCCACTTATCCTTCACACACGAACTGGACGTTTGATCAACTATATTGAAGATGAAAAACATGGGGTTCGCCTATTTTGGCAGCCGCCTCTCAAAGATGGGGAAGAGGTGGACCCAGAAAAGGCGGAGCTCCTTCCGCTTGGTTATGATGAGTTCTATGGACAAAACATTGGTGACAAGAAACAAAACTTTTTGATGCGACTTATATCAGCAGTAGAAAATACATGCAAGCCTGTTTTTGATAAACTAGAGAAATGGACTGAAGAGAAGAGGAAAGCAAGTGAGATGAAGATGAAATTGATTGAAAAAGAACTTGAACTGATAGAGGCTGAACTGTGCCTGGAAGAGGTAATTGAGGATATGGATGAGGAGTTGAAGATGAGAGAGAAAGAGGAGGAGAAGAATGTGGAAACGGTCTCGCCGGATGAAGAAGATACTTCTCCATTGGCTAACCAAGATGAGAAATCAATTGAAGAGGATGAAGAGGAAGAGGAAGAGGACGAGGAAGAGGAAGATGAAGATGAAGATGATGCTGCGCCATCAAGTTTTGGGTCTGTAAGAGGAGAACAGGATGGTACCAAAAATGGCCAGAAGGGTAATAAACCTGGGCGATCTCCATTTTCCACATCCTCATTGGCATTCGCTTCAAGTAGCCTCGTCTCTGGGATTCCATCCAGGCTGCAACAGTCGTTTTTAGCATGGAAAAATAGTAAAGCAATACCAAAGACAGCTACTTCTTCATGCAATGAAGCCTCTTGTTGCAACTTGAAAACAGTTGATTCAGTGAGTTTCCCTCCGTTGGTTGTCCCAAAAGTAAACTTGAAAGCCCTAAAGCAAAGACACTTGAACTTCCAAGCCAAAATCTCCTCAAATAGGAGGCTATCTCAGTTGCGGCCGTCATGTCAAATAAGCTCACATCACTCAGCTTCTATGAACACCAGAATAAGCCCAGGAGAAATGAGATTGAAAAACAATAGTTGGCTGCATGCATCACCAGAGAGGGAGTCGGACAGCATATTGTCTTTGCACACACCATGGTATCATTTGGAGCCAAATGAAGAAACCATACGTGGTGAGCCACTTCCTCTCCGTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009658 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042170 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0061458 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

857

Amino Acids

98.24

Weight (kDa)

4.44

Isoelectric Point (pI)

60.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22640 AT5G22640 AT5G22640
fragaria_vesca	FvH4_3g29910 FvH4_3g29910 FvH4_3g29910
malus_domestica	MD03G1134600.v1.1 MD11G1157100.v1.1
prunus_persica	Prupe.6G118900_v2.0.a1 Prupe.6G118900_v2.0.a1
pyrus_communis	pycom03g09060 pycom11g12730
rosa_chinensis	RchiOBHm_Chr5g0055251
rosa_laevigata	RLG00000034978
rosa_multiflora	Rmu_co8251283.1_g000001 Rmu_co8349015.1_g000001 Rmu_sc0003110.1_g000015 Rmu_sc0013362.1_g000001 Rmu_sc0014992.1_g000001
rosa_roxburghii	Rroxscaffold_1G00025050
rosa_rugosa	Rorug05G0292100 Rorug05G0292200
rosa_samantha	Rh5AG361900 Rh5BG373500 Rh5CG395200 Rh5DG386700
rosa_wichuraiana	Rw5G034030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1097
Acc65I	GGTACC	1 cut(s)	2051
AccB1I	GGYRCC	3 cut(s)	644, 1240, 2051
AccBSI	CCGCTC	1 cut(s)	47
AccI	GTMKAC	2 cut(s)	120, 681
AclWI	GGATC	4 cut(s)	955, 1190, 1436, 1472
AcoI	YGGCCR	3 cut(s)	522, 2062, 2369
AcsI	RAATTY	2 cut(s)	920, 1409
AcuI	CTGAAG	5 cut(s)	552, 840, 1467, 1494, 1758
AdeI	CACNNNGTG	1 cut(s)	651
AfaI	GTAC	2 cut(s)	1027, 2053
AfeI	AGCGCT	2 cut(s)	168, 1098
AfiI	CCNNNNNNNGG	7 cut(s)	421, 788, 1035, 1597, 1822, 2275, 2349
AjnI	CCWGG	6 cut(s)	787, 1243, 1815, 2080, 2150, 2425
Alw21I	GWGCWC	2 cut(s)	372, 1608
Alw26I	GTCTC	3 cut(s)	1394, 1897, 2140
AlwI	GGATC	4 cut(s)	955, 1190, 1436, 1472
AlwNI	CAGNNNCTG	1 cut(s)	1439
Ama87I	CYCGRG	1 cut(s)	218
Aor51HI	AGCGCT	2 cut(s)	168, 1098
AoxI	GGCC	7 cut(s)	67, 182, 465, 522, 1183, 2062, 2369
ApaI	GGGCCC	1 cut(s)	1187
ApeKI	GCWGC	8 cut(s)	630, 1099, 1124, 1127, 1558, 2009, 2155, 2458
ApoI	RAATTY	2 cut(s)	920, 1409
Asp700I	GAANNNNTTC	3 cut(s)	236, 723, 1334
Asp718I	GGTACC	1 cut(s)	2051
AspLEI	GCGC	4 cut(s)	169, 385, 1099, 2014
AspS9I	GGNCC	7 cut(s)	183, 313, 334, 412, 1183, 1184, 1588
AsuC2I	CCSGG	6 cut(s)	62, 186, 329, 405, 416, 854
AsuHPI	GGTGA	8 cut(s)	34, 164, 235, 389, 728, 1661, 2460, 2561
AvaI	CYCGRG	1 cut(s)	218
AvaII	GGWCC	4 cut(s)	313, 334, 412, 1588
BaeGI	GKGCMC	3 cut(s)	647, 828, 1187
BaeI	ACNNNNGTAYC	4 cut(s)	1009, 1042, 2498, 2531
BalI	TGGCCA	1 cut(s)	2064
BanI	GGYRCC	3 cut(s)	644, 1240, 2051
BanII	GRGCYC	4 cut(s)	93, 372, 1187, 1608
BarI	GAAGNNNNNNTAC	4 cut(s)	750, 782, 2526, 2558
BbsI	GAAGAC	2 cut(s)	864, 1455
Bbv12I	GWGCWC	2 cut(s)	372, 1608
BbvI	GCAGC	8 cut(s)	642, 1086, 1111, 1114, 1570, 1996, 2142, 2445
BceAI	ACGGC	2 cut(s)	643, 2356
BciT130I	CCWGG	6 cut(s)	789, 1245, 1817, 2082, 2152, 2427
BclI	TGATCA	1 cut(s)	1512
BcnI	CCSGG	6 cut(s)	62, 186, 329, 405, 416, 854
BcoDI	GTCTC	3 cut(s)	1394, 1897, 2140
BfaI	CTAG	2 cut(s)	902, 1724
BfoI	RGCGCY	2 cut(s)	170, 1100
BfuAI	ACCTGC	1 cut(s)	1097
Bme18I	GGWCC	4 cut(s)	313, 334, 412, 1588
BmeT110I	CYCGRG	1 cut(s)	218
BmgT120I	GGNCC	7 cut(s)	183, 313, 334, 412, 1183, 1184, 1588
BmsI	GCATC	6 cut(s)	370, 801, 989, 1662, 1996, 2474
BpiI	GAAGAC	2 cut(s)	864, 1455
BplI	GAGNNNNNCTC	4 cut(s)	2254, 2286, 2344, 2376
BpmI	CTGGAG	2 cut(s)	1082, 1389
Bpu10I	CCTNAGC	1 cut(s)	1131
BpuEI	CTTGAG	1 cut(s)	33
BpuMI	CCSGG	6 cut(s)	62, 186, 329, 405, 416, 854
BsaAI	YACGTR	1 cut(s)	2546
BsaI	GGTCTC	1 cut(s)	1897
BsaJI	CCNNGG	7 cut(s)	219, 387, 558, 852, 2081, 2425, 2510
BsaWI	WCCGGW	2 cut(s)	199, 507
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 98, 128, 669, 699, 2547
Bsc4I	CCNNNNNNNGG	7 cut(s)	421, 788, 1035, 1597, 1822, 2275, 2349
Bse118I	RCCGGY	2 cut(s)	143, 467
Bse1I	ACTGG	5 cut(s)	1065, 1078, 1286, 1388, 1507
Bse3DI	GCAATG	3 cut(s)	478, 483, 2227
BseBI	CCWGG	6 cut(s)	789, 1245, 1817, 2082, 2152, 2427
BseDI	CCNNGG	7 cut(s)	219, 387, 558, 852, 2081, 2425, 2510
BseLI	CCNNNNNNNGG	7 cut(s)	421, 788, 1035, 1597, 1822, 2275, 2349
BseMI	GCAATG	3 cut(s)	478, 483, 2227
BseMII	CTCAG	5 cut(s)	613, 1343, 1362, 2375, 2412
BseNI	ACTGG	5 cut(s)	1065, 1078, 1286, 1388, 1507
BseSI	GKGCMC	3 cut(s)	647, 828, 1187
BseX3I	CGGCCG	1 cut(s)	2369
BseXI	GCAGC	8 cut(s)	642, 1086, 1111, 1114, 1570, 1996, 2142, 2445
BseYI	CCCAGC	1 cut(s)	36
Bsh1285I	CGRYCG	1 cut(s)	2372
BshFI	GGCC	7 cut(s)	69, 184, 467, 524, 1185, 2064, 2371
BshNI	GGYRCC	3 cut(s)	644, 1240, 2051
BsiEI	CGRYCG	1 cut(s)	2372
BsiHKAI	GWGCWC	2 cut(s)	372, 1608
BsiHKCI	CYCGRG	1 cut(s)	218
BslFI	GGGAC	4 cut(s)	425, 711, 1256, 2267
BslI	CCNNNNNNNGG	7 cut(s)	421, 788, 1035, 1597, 1822, 2275, 2349
BsmAI	GTCTC	3 cut(s)	1394, 1897, 2140
BsmBI	CGTCTC	1 cut(s)	2140
BsmFI	GGGAC	4 cut(s)	425, 711, 1256, 2267
BsmI	GAATGC	2 cut(s)	996, 2114
BsnI	GGCC	7 cut(s)	69, 184, 467, 524, 1185, 2064, 2371
Bso31I	GGTCTC	1 cut(s)	1897
BsoBI	CYCGRG	1 cut(s)	218
Bsp120I	GGGCCC	1 cut(s)	1183
Bsp1286I	GDGCHC	6 cut(s)	93, 372, 647, 828, 1187, 1608
Bsp143I	GATC	8 cut(s)	535, 898, 947, 1195, 1441, 1477, 1512, 2087
Bsp19I	CCATGG	1 cut(s)	2510
BspANI	GGCC	7 cut(s)	69, 184, 467, 524, 1185, 2064, 2371
BspCNI	CTCAG	5 cut(s)	612, 1344, 1363, 2374, 2411
BspMI	ACCTGC	1 cut(s)	1097
BspPI	GGATC	4 cut(s)	955, 1190, 1436, 1472
BspT107I	GGYRCC	3 cut(s)	644, 1240, 2051
BspTNI	GGTCTC	1 cut(s)	1897
BsrBI	CCGCTC	1 cut(s)	47
BsrDI	GCAATG	3 cut(s)	478, 483, 2227
BsrFI	RCCGGY	2 cut(s)	143, 467
BsrI	ACTGG	5 cut(s)	1065, 1078, 1286, 1388, 1507
BssAI	RCCGGY	2 cut(s)	143, 467
BssECI	CCNNGG	7 cut(s)	219, 387, 558, 852, 2081, 2425, 2510
BssMI	GATC	8 cut(s)	535, 898, 947, 1195, 1441, 1477, 1512, 2087
BssT1I	CCWWGG	3 cut(s)	387, 558, 2510
Bst2UI	CCWGG	6 cut(s)	789, 1245, 1817, 2082, 2152, 2427
Bst4CI	ACNGT	6 cut(s)	649, 971, 1812, 1891, 2163, 2251
BstAPI	GCANNNNNTGC	1 cut(s)	1112
BstBAI	YACGTR	1 cut(s)	2546
BstC8I	GCNNGC	6 cut(s)	469, 816, 1055, 1104, 1706, 2463
BstDEI	CTNAG	6 cut(s)	599, 1131, 1352, 1371, 2361, 2398
BstDSI	CCRYGG	1 cut(s)	2510
BstENI	CCTNNNNNAGG	3 cut(s)	786, 1820, 2347
BstH2I	RGCGCY	2 cut(s)	170, 1100
BstHHI	GCGC	4 cut(s)	169, 385, 1099, 2014
BstKTI	GATC	8 cut(s)	538, 901, 950, 1198, 1444, 1480, 1515, 2090
BstMAI	GTCTC	3 cut(s)	1394, 1897, 2140
BstMBI	GATC	8 cut(s)	535, 898, 947, 1195, 1441, 1477, 1512, 2087
BstMCI	CGRYCG	1 cut(s)	2372
BstMWI	GCNNNNNNNGC	7 cut(s)	175, 1103, 1112, 1121, 1133, 1372, 1612
BstNI	CCWGG	6 cut(s)	789, 1245, 1817, 2082, 2152, 2427
BstNSI	RCATGY	4 cut(s)	986, 1106, 1704, 2465
BstSLI	GKGCMC	3 cut(s)	647, 828, 1187
BstV1I	GCAGC	8 cut(s)	642, 1086, 1111, 1114, 1570, 1996, 2142, 2445
BstV2I	GAAGAC	2 cut(s)	864, 1455
BstX2I	RGATCY	1 cut(s)	1477
BstXI	CCANNNNNNTGG	1 cut(s)	345
BstYI	RGATCY	1 cut(s)	1477
BstZI	CGGCCG	1 cut(s)	2369
BsuRI	GGCC	7 cut(s)	69, 184, 467, 524, 1185, 2064, 2371
BtgI	CCRYGG	1 cut(s)	2510
BtsIMutI	CAGTG	4 cut(s)	27, 980, 1349, 2265
BveI	ACCTGC	1 cut(s)	1097
Cac8I	GCNNGC	6 cut(s)	469, 816, 1055, 1104, 1706, 2463
CaiI	CAGNNNCTG	1 cut(s)	1439
CfoI	GCGC	4 cut(s)	169, 385, 1099, 2014
Cfr10I	RCCGGY	2 cut(s)	143, 467
Cfr13I	GGNCC	7 cut(s)	183, 313, 334, 412, 1183, 1184, 1588
Csp6I	GTAC	2 cut(s)	1026, 2052
CviQI	GTAC	2 cut(s)	1026, 2052
DdeI	CTNAG	6 cut(s)	599, 1131, 1352, 1371, 2361, 2398
DpnI	GATC	8 cut(s)	537, 900, 949, 1197, 1443, 1479, 1514, 2089
DpnII	GATC	8 cut(s)	535, 898, 947, 1195, 1441, 1477, 1512, 2087
DraIII	CACNNNGTG	1 cut(s)	651
EaeI	YGGCCR	3 cut(s)	522, 2062, 2369
EagI	CGGCCG	1 cut(s)	2369
EciI	GGCGGA	1 cut(s)	1616
Ecl136II	GAGCTC	2 cut(s)	370, 1606
EclXI	CGGCCG	1 cut(s)	2369
Eco130I	CCWWGG	3 cut(s)	387, 558, 2510
Eco24I	GRGCYC	4 cut(s)	93, 372, 1187, 1608
Eco31I	GGTCTC	1 cut(s)	1897
Eco47I	GGWCC	4 cut(s)	313, 334, 412, 1588
Eco47III	AGCGCT	2 cut(s)	168, 1098
Eco52I	CGGCCG	1 cut(s)	2369
Eco53kI	GAGCTC	2 cut(s)	370, 1606
Eco57I	CTGAAG	5 cut(s)	552, 840, 1467, 1494, 1758
Eco88I	CYCGRG	1 cut(s)	218
EcoICRI	GAGCTC	2 cut(s)	370, 1606
EcoNI	CCTNNNNNAGG	3 cut(s)	786, 1820, 2347
EcoO109I	RGGNCCY	4 cut(s)	313, 334, 412, 1183
EcoRII	CCWGG	6 cut(s)	787, 1243, 1815, 2080, 2150, 2425
EcoT14I	CCWWGG	3 cut(s)	387, 558, 2510
EcoT22I	ATGCAT	2 cut(s)	996, 2467
EcoT38I	GRGCYC	4 cut(s)	93, 372, 1187, 1608
ErhI	CCWWGG	3 cut(s)	387, 558, 2510
Esp3I	CGTCTC	1 cut(s)	2140
FalI	AAGNNNNNCTT	2 cut(s)	1467, 1499
FaqI	GGGAC	4 cut(s)	425, 711, 1256, 2267
FauI	CCCGC	2 cut(s)	342, 486
FauNDI	CATATG	1 cut(s)	1291
FbaI	TGATCA	1 cut(s)	1512
FblI	GTMKAC	2 cut(s)	120, 681
FriOI	GRGCYC	4 cut(s)	93, 372, 1187, 1608
FspBI	CTAG	2 cut(s)	902, 1724
GlaI	GCGC	4 cut(s)	168, 384, 1098, 2013
GsaI	CCCAGC	1 cut(s)	40
GsuI	CTGGAG	2 cut(s)	1082, 1389
HaeII	RGCGCY	2 cut(s)	170, 1100
HaeIII	GGCC	7 cut(s)	69, 184, 467, 524, 1185, 2064, 2371
HhaI	GCGC	4 cut(s)	169, 385, 1099, 2014
Hin6I	GCGC	4 cut(s)	167, 383, 1097, 2012
HinP1I	GCGC	4 cut(s)	167, 383, 1097, 2012
HincII	GTYRAC	3 cut(s)	763, 1018, 1423
HindII	GTYRAC	3 cut(s)	763, 1018, 1423
HindIII	AAGCTT	2 cut(s)	797, 1460
HpaI	GTTAAC	1 cut(s)	1423
HphI	GGTGA	8 cut(s)	34, 164, 235, 389, 728, 1661, 2460, 2561
Hpy166II	GTNNAC	9 cut(s)	121, 160, 682, 763, 1018, 1150, 1423, 1588, 2293
Hpy188I	TCNGA	9 cut(s)	82, 88, 106, 602, 918, 952, 1140, 1372, 2485
Hpy188III	TCNNGA	6 cut(s)	50, 218, 837, 887, 1406, 1445
Hpy8I	GTNNAC	9 cut(s)	121, 160, 682, 763, 1018, 1150, 1423, 1588, 2293
Hpy99I	CGWCG	1 cut(s)	110
HpyAV	CCTTC	9 cut(s)	119, 358, 707, 815, 1345, 1377, 1499, 1619, 2062
HpyCH4III	ACNGT	6 cut(s)	649, 971, 1812, 1891, 2163, 2251
HpyCH4IV	ACGT	3 cut(s)	684, 1507, 2545
HpyF10VI	GCNNNNNNNGC	7 cut(s)	175, 1103, 1112, 1121, 1133, 1372, 1612
HpyF3I	CTNAG	6 cut(s)	599, 1131, 1352, 1371, 2361, 2398
HpySE526I	ACGT	3 cut(s)	684, 1507, 2545
HspAI	GCGC	4 cut(s)	167, 383, 1097, 2012
KflI	GGGWCCC	1 cut(s)	412
KpnI	GGTACC	1 cut(s)	2055
KroI	GCCGGC	1 cut(s)	467
KroNI	GCCGGC	1 cut(s)	469
Ksp22I	TGATCA	1 cut(s)	1512
KspAI	GTTAAC	1 cut(s)	1423
Kzo9I	GATC	8 cut(s)	535, 898, 947, 1195, 1441, 1477, 1512, 2087
LmnI	GCTCC	8 cut(s)	183, 220, 367, 493, 1351, 1603, 1611, 2524
Lsp1109I	GCAGC	8 cut(s)	642, 1086, 1111, 1114, 1570, 1996, 2142, 2445
LweI	GCATC	6 cut(s)	370, 801, 989, 1662, 1996, 2474
MaeI	CTAG	2 cut(s)	902, 1724
MaeII	ACGT	3 cut(s)	684, 1507, 2545
MaeIII	GTNAC	3 cut(s)	137, 249, 1649
MalI	GATC	8 cut(s)	537, 900, 949, 1197, 1443, 1479, 1514, 2089
MbiI	CCGCTC	1 cut(s)	47
MboI	GATC	8 cut(s)	535, 898, 947, 1195, 1441, 1477, 1512, 2087
MfeI	CAATTG	1 cut(s)	1944
MflI	RGATCY	1 cut(s)	1477
MhlI	GDGCHC	6 cut(s)	93, 372, 647, 828, 1187, 1608
MlsI	TGGCCA	1 cut(s)	2064
MluCI	AATT	7 cut(s)	172, 920, 1259, 1409, 1772, 1827, 1944
MluNI	TGGCCA	1 cut(s)	2064
MlyI	GAGTC	7 cut(s)	8, 77, 119, 687, 693, 1396, 2489
MmeI	TCCRAC	5 cut(s)	105, 129, 558, 852, 2463
Mox20I	TGGCCA	1 cut(s)	2064
Mph1103I	ATGCAT	2 cut(s)	996, 2467
MroNI	GCCGGC	1 cut(s)	467
MroXI	GAANNNNTTC	3 cut(s)	236, 723, 1334
MscI	TGGCCA	1 cut(s)	2064
MseI	TTAA	4 cut(s)	450, 462, 1422, 2572
Msp20I	TGGCCA	1 cut(s)	2064
MunI	CAATTG	1 cut(s)	1944
Mva1269I	GAATGC	2 cut(s)	996, 2114
MvaI	CCWGG	6 cut(s)	789, 1245, 1817, 2082, 2152, 2427
MwoI	GCNNNNNNNGC	7 cut(s)	175, 1103, 1112, 1121, 1133, 1372, 1612
NaeI	GCCGGC	1 cut(s)	469
NciI	CCSGG	6 cut(s)	62, 186, 329, 405, 416, 854
NcoI	CCATGG	1 cut(s)	2510
NdeI	CATATG	1 cut(s)	1291
NdeII	GATC	8 cut(s)	535, 898, 947, 1195, 1441, 1477, 1512, 2087
NgoMIV	GCCGGC	1 cut(s)	467
NmuCI	GTSAC	1 cut(s)	1649
NsiI	ATGCAT	2 cut(s)	996, 2467
NspI	RCATGY	4 cut(s)	986, 1106, 1704, 2465
PaeI	GCATGC	2 cut(s)	1106, 2465
PcsI	WCGNNNNNNNCGW	3 cut(s)	105, 114, 1504
PctI	GAATGC	2 cut(s)	996, 2114
PdiI	GCCGGC	1 cut(s)	469
PdmI	GAANNNNTTC	3 cut(s)	236, 723, 1334
PfeI	GAWTC	4 cut(s)	32, 101, 2143, 2255
PfoI	TCCNGGA	1 cut(s)	327
PleI	GAGTC	7 cut(s)	8, 77, 118, 686, 693, 1396, 2488
PpsI	GAGTC	7 cut(s)	8, 77, 118, 686, 693, 1396, 2488
Ppu21I	YACGTR	1 cut(s)	2546
PpuMI	RGGWCCY	3 cut(s)	313, 334, 412
Psp124BI	GAGCTC	2 cut(s)	372, 1608
Psp5II	RGGWCCY	3 cut(s)	313, 334, 412
Psp6I	CCWGG	6 cut(s)	787, 1243, 1815, 2080, 2150, 2425
PspFI	CCCAGC	1 cut(s)	36
PspGI	CCWGG	6 cut(s)	787, 1243, 1815, 2080, 2150, 2425
PspOMI	GGGCCC	1 cut(s)	1183
PspPI	GGNCC	7 cut(s)	183, 313, 334, 412, 1183, 1184, 1588
PspPPI	RGGWCCY	3 cut(s)	313, 334, 412
PstNI	CAGNNNCTG	1 cut(s)	1439
PsuI	RGATCY	1 cut(s)	1477
RsaI	GTAC	2 cut(s)	1027, 2053
RsaNI	GTAC	2 cut(s)	1026, 2052
SacI	GAGCTC	2 cut(s)	372, 1608
SaqAI	TTAA	4 cut(s)	450, 462, 1422, 2572
Sau3AI	GATC	8 cut(s)	535, 898, 947, 1195, 1441, 1477, 1512, 2087
Sau96I	GGNCC	7 cut(s)	183, 313, 334, 412, 1183, 1184, 1588
SchI	GAGTC	7 cut(s)	8, 77, 119, 687, 693, 1396, 2489
SduI	GDGCHC	6 cut(s)	93, 372, 647, 828, 1187, 1608
SfaNI	GCATC	6 cut(s)	370, 801, 989, 1662, 1996, 2474
SinI	GGWCC	4 cut(s)	313, 334, 412, 1588
SmlI	CTYRAG	1 cut(s)	48
SmoI	CTYRAG	1 cut(s)	48
SphI	GCATGC	2 cut(s)	1106, 2465
Sse9I	AATT	7 cut(s)	172, 920, 1259, 1409, 1772, 1827, 1944
SspMI	CTAG	2 cut(s)	902, 1724
SstI	GAGCTC	2 cut(s)	372, 1608
StyI	CCWWGG	3 cut(s)	387, 558, 2510
TaaI	ACNGT	6 cut(s)	649, 971, 1812, 1891, 2163, 2251
TaiI	ACGT	3 cut(s)	687, 1510, 2548
TaqI	TCGA	1 cut(s)	1305
TasI	AATT	7 cut(s)	172, 920, 1259, 1409, 1772, 1827, 1944
TauI	GCSGC	2 cut(s)	1564, 2371
TfiI	GAWTC	4 cut(s)	32, 101, 2143, 2255
Tru1I	TTAA	4 cut(s)	450, 462, 1422, 2572
Tru9I	TTAA	4 cut(s)	450, 462, 1422, 2572
TscAI	CASTG	4 cut(s)	34, 980, 1356, 2265
TseFI	GTSAC	1 cut(s)	1649
TseI	GCWGC	8 cut(s)	630, 1099, 1124, 1127, 1558, 2009, 2155, 2458
Tsp45I	GTSAC	1 cut(s)	1649
TspGWI	ACGGA	3 cut(s)	106, 2262, 2555
TspRI	CASTG	4 cut(s)	34, 980, 1356, 2265
VpaK11BI	GGWCC	4 cut(s)	313, 334, 412, 1588
XagI	CCTNNNNNAGG	3 cut(s)	786, 1820, 2347
XapI	RAATTY	2 cut(s)	920, 1409
XceI	RCATGY	4 cut(s)	986, 1106, 1704, 2465
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2107
XmiI	GTMKAC	2 cut(s)	120, 681
XmnI	GAANNNNTTC	3 cut(s)	236, 723, 1334
XspI	CTAG	2 cut(s)	902, 1724
Zsp2I	ATGCAT	2 cut(s)	996, 2467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.