Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0001484

Physical Location & Seq

Genomic Coordinates Forward (+)

31771119 .. 31776283

Gene Structure 5165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1239700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGGATACGTGTCCAGTAGGCAATTCCAACTCTTTTCCCTCCACGTGACATCTCTGTCCTCTTCTCTTCTCTTTTCTCGCTTTGTGCTTTCCTACTGCACCAACAACTCGAAGCAGAAAAAGCATTCCTGTACCTTCCCCATCCATCGCCAAACCTCGAGAGAGAATCTATCTCGCCGCGAATCCATGATGGAGTCCTCCGCCGATGACCGCCGGAGCCATTCCGGCAGCTCTAGCGACATGTCCGTCTCTTTCGAAGCCGAAGTCCCTCGCAATCCTAATGACGAATATGCCACCCCTTCCTCAGGTTCCGTCGTCGCCTTCTTAGTCTTCTTCTTCATCGGCATTGTCTTTTTCGTAACTTTGGTTTCGAATTTGTGGAAAAATGCGGATTTCGTAGGGAAGTTGGAGAGGGATGTGCAAACAGAGCGAAATTCCGGAGAATCATCATCCGCCGTCCGTACATCGTCCGGTTCGAGTCAACTCACTGCCAGCGCGAGATTGAGTCAGAACCAGGCGTTGTCTGTAACTCTCGCCAAGCTCTTCGATCAAAGAACTCCTTTTAGAAAAAAGCGGAAATATATAAAGCAGCTGGCAACAGTGAAAGATGACGGAACGGTGCAATTTGACGTTCCGGGAGATATTAAGCCACAGTATCTGGATTTCGGAACTGGAGCTGCTCACAGTGAGGCAGCTTCTGGTGCAGAAGCTTGCGGCGAAACGGAAGCTGAAGTTCGAGATATACCTCCGTTGCAAATTGTAATGCTTATTGTCGGCACGCGAGGAGATGTGCAGCCGTTTGTTGCCATTGGAAAACGTTTGCAGGAATATGGCCATAGGGTTAGGCTAGCGACTCATGCAAATTTCAAAGATTTTGTCCTTACTGCTGGGTTGGAGTTCTATCCTTTAGGTGGAGATCCAAAAGTTCTTGCTGGTTATATGGTCAAGAATAAAGGTTTCTTGCCATCAGGACCTTCGGAAATATCAATTCAGCGACAGCAGTTAAGGGAAATAATTTTTTCTTTACTTCCTGCATGCAAGGAACCTGATCCCGATTCCAAAGTTCCATTTAAAGCAGAAGCAATAATTGCCAACCCACCAGCCTATGGGCACTCTCATGTCGCTGAGGCACTAAAAGTACCGCTTCATATATTCTTCACAATGCCATGGACGCCTACGAATGAATTCCCCCATCCTCTATCCCGTGTCACGCAACCGATTGGATATAGACTATCATATCAAATAGTCGATGCATTAATTTGGCTAGGAATTCGAGACATGATAAATGAGTTTAGGAAGAAAATGCTGAAGCTGAGACCTATCACATATTTAAGTGGAAACTATAGTTCTCAACCTGACGTGCCCCATGGGTATATATGGAGTCCTCATCTTGTTCCCAAACCTAAAGATTGGGGACCGAATATTGATGTTGTTGGGTTTTGTTTTCTTGACCTTGCTTCAAATTATGAACCCCCAGAGCCACTTGCGAAGTGGCTTGAAGCTGGTGACGAGCCTGTCTATATTGGATTTGGTAGCCTGCCTCTTCAAGAACCGGAGAAAATGACCGATATTATTCTTCAAGCTCTGGAAATAACTGGACAGAGAGGCATTATCAACAGAGGCTGGGGTGGCCTTGGTAATTCGGTAGAACCTAGTGATTCTGTGTACTTGGTGGACAATTGCCCCCATGATTGGCTATTCAAACGATGCTCTGCTGTGGTACATCATGGCGGTGCTGGAACAACTGCTGCTGGTCTGAAAGCTGCGTGTCCGACTACAATTATACCATTCTTCGGGGACCAGCCGTTTTGGGGTGAGAGGGTGCATGCCAGAGGTGTCGGTCCTGCACCCATCCCGGTTGAGGAATTCTCGCTTGACAAGTTGGTTGATGCCATACGCTTTATGTTAGATCCAAAGGTTAAAGAGTGCGCCATAGAAATTGCGAAGGCCATGGATAACGAAGACGGGGTCAGGGGAGCGGTGAAGGCCTTTCATAGGCACTTTCCTTGCAATAGATCCGATGATGGCGAACCCGATCAGTCATTGCCAGCTAGAAAAGGGCTATTATCCATCAGGAGATGTTTTGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_28 UDPGT

Protein Analysis

697

Amino Acids

77.06

Weight (kDa)

7.29

Isoelectric Point (pI)

44.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_28	PF03033	253 - 396	6.1e-31	Glycosyltransferase family 28 N-terminal domain
EryCIII-like_C	PF06722	553 - 651	6.3e-13	Erythromycin biosynthesis protein CIII-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001484)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07020 AT3G07020 AT3G07020
fragaria_vesca	FvH4_2g19510 FvH4_2g19510 FvH4_6g00960 FvH4_6g00960 FvH4_6g00960 FvH4_6g00960 FvH4_6g00960 FvH4_6g00960 FvH4_6g00960 FvH4_6g00960 FvH4_6g00960
malus_domestica	MD04G1239700.v1.1 MD05G1179300.v1.1 MD10G1168900.v1.1 MD12G1256800.v1.1
prunus_persica	Prupe.6G357600_v2.0.a1 Prupe.6G357600_v2.0.a1 Prupe.6G357600_v2.0.a1 Prupe.6G357600_v2.0.a1 Prupe.8G206600_v2.0.a1
pyrus_communis	pycom04g21170 pycom05g16580 pycom10g14560 pycom12g23550
rosa_chinensis	RchiOBHm_Chr3g0448421 RchiOBHm_Chr6g0285231
rosa_laevigata	RLG00000012659 RLG00000025915
rosa_multiflora	Rmu_co8366969.1_g000001 Rmu_sc0003308.1_g000009 Rmu_sc0006212.1_g000001 Rmu_sc0008044.1_g000002
rosa_roxburghii	Rroxscaffold_6G00426610 Rroxscaffold_7G00183400
rosa_rugosa	Rorug02G0612300 Rorug02G0612400 Rorug06G0173300
rosa_samantha	Rh3AG011700 Rh3BG011500 Rh3CG011200 Rh3DG011900 Rh6AG283800 Rh6BG284600 Rh6CG286200 Rh6DG279200
rosa_wichuraiana	Rw0G022080 Rw3G000900 Rw6G024420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	55, 245, 1514
AccB7I	CCANNNNNTGG	1 cut(s)	1106
AccBSI	CCGCTC	1 cut(s)	1979
AccII	CGCG	3 cut(s)	180, 497, 781
AccIII	TCCGGA	1 cut(s)	437
AclI	AACGTT	1 cut(s)	817
AclWI	GGATC	4 cut(s)	911, 1043, 1904, 2010
AcoI	YGGCCR	1 cut(s)	832
AcsI	RAATTY	6 cut(s)	373, 433, 862, 1184, 1269, 1865
AcuI	CTGAAG	2 cut(s)	750, 1328
AcvI	CACGTG	1 cut(s)	46
AcyI	GRCGYC	1 cut(s)	1172
AfaI	GTAC	5 cut(s)	133, 463, 1140, 1667, 1722
AfiI	CCNNNNNNNGG	8 cut(s)	305, 911, 1106, 1692, 1793, 1811, 1861, 1995
AflIII	ACRYGT	2 cut(s)	9, 240
AgsI	TTSAA	6 cut(s)	868, 1461, 1499, 1547, 1580, 1702
AjiI	CACGTC	1 cut(s)	1360
AjnI	CCWGG	1 cut(s)	513
Alw26I	GTCTC	3 cut(s)	253, 1269, 1309
AlwI	GGATC	4 cut(s)	911, 1043, 1904, 2010
AlwNI	CAGNNNCTG	3 cut(s)	658, 698, 1623
Ama87I	CYCGRG	1 cut(s)	157
Aor13HI	TCCGGA	1 cut(s)	437
AoxI	GGCC	4 cut(s)	832, 1630, 1947, 1986
ApeKI	GCWGC	7 cut(s)	228, 589, 677, 692, 793, 1748, 1763
ApoI	RAATTY	6 cut(s)	373, 433, 862, 1184, 1269, 1865
ArsI	GACNNNNNNTTYG	6 cut(s)	249, 281, 861, 893, 1953, 1985
AseI	ATTAAT	1 cut(s)	1256
Asp700I	GAANNNNTTC	1 cut(s)	1184
AspLEI	GCGC	2 cut(s)	497, 1931
AspS9I	GGNCC	4 cut(s)	971, 1415, 1798, 1841
AsuC2I	CCSGG	2 cut(s)	636, 1856
AsuHPI	GGTGA	3 cut(s)	1517, 1826, 1993
AsuII	TTCGAA	2 cut(s)	255, 371
AsuNHI	GCTAGC	1 cut(s)	847
AvaI	CYCGRG	1 cut(s)	157
AvaII	GGWCC	4 cut(s)	971, 1415, 1798, 1841
AxyI	CCTNAGG	1 cut(s)	304
BaeGI	GKGCMC	2 cut(s)	1113, 1365
BalI	TGGCCA	1 cut(s)	834
BbrPI	CACGTG	1 cut(s)	46
BbsI	GAAGAC	2 cut(s)	322, 1968
BbvCI	CCTCAGC	1 cut(s)	1125
BbvI	GCAGC	7 cut(s)	240, 601, 664, 704, 805, 1735, 1750
BccI	CCATC	8 cut(s)	149, 153, 184, 973, 1200, 1859, 2018, 2078
BceAI	ACGGC	3 cut(s)	440, 781, 1789
BciT130I	CCWGG	1 cut(s)	515
BcnI	CCSGG	2 cut(s)	636, 1856
BcoDI	GTCTC	3 cut(s)	253, 1269, 1309
BfaI	CTAG	5 cut(s)	234, 848, 1265, 1653, 2052
BfmI	CTRYAG	1 cut(s)	1342
BglI	GCCNNNNNGGC	1 cut(s)	225
BisI	GCNGC	9 cut(s)	178, 229, 590, 678, 693, 715, 794, 1749, 1764
BlsI	GCNGC	9 cut(s)	179, 230, 591, 679, 694, 716, 795, 1750, 1765
Bme1390I	CCNGG	3 cut(s)	515, 636, 1856
Bme18I	GGWCC	4 cut(s)	971, 1415, 1798, 1841
BmeT110I	CYCGRG	1 cut(s)	157
BmgBI	CACGTC	1 cut(s)	1360
BmgT120I	GGNCC	4 cut(s)	971, 1415, 1798, 1841
BmiI	GGNNCC	5 cut(s)	218, 310, 1044, 1416, 1799
BmrFI	CCNGG	3 cut(s)	515, 636, 1856
BmsI	GCATC	3 cut(s)	1240, 1697, 1879
BmtI	GCTAGC	1 cut(s)	851
BpiI	GAAGAC	2 cut(s)	322, 1968
BplI	GAGNNNNNCTC	2 cut(s)	1853, 1885
BpmI	CTGGAG	1 cut(s)	693
Bpu10I	CCTNAGC	1 cut(s)	1125
Bpu14I	TTCGAA	2 cut(s)	255, 371
BpuMI	CCSGG	2 cut(s)	636, 1856
BsaAI	YACGTR	2 cut(s)	10, 46
BsaHI	GRCGYC	1 cut(s)	1172
BsaI	GGTCTC	1 cut(s)	1309
BsaJI	CCNNGG	4 cut(s)	1166, 1366, 1633, 1950
BsaWI	WCCGGW	3 cut(s)	437, 470, 1552
Bsc4I	CCNNNNNNNGG	8 cut(s)	305, 911, 1106, 1692, 1793, 1811, 1861, 1995
Bse1I	ACTGG	3 cut(s)	15, 676, 1600
Bse21I	CCTNAGG	1 cut(s)	304
Bse3DI	GCAATG	1 cut(s)	2042
BseAI	TCCGGA	1 cut(s)	437
BseBI	CCWGG	1 cut(s)	515
BseDI	CCNNGG	4 cut(s)	1166, 1366, 1633, 1950
BseGI	GGATG	5 cut(s)	141, 421, 449, 1192, 1851
BseLI	CCNNNNNNNGG	8 cut(s)	305, 911, 1106, 1692, 1793, 1811, 1861, 1995
BseMI	GCAATG	1 cut(s)	2042
BseMII	CTCAG	3 cut(s)	318, 1116, 1304
BseNI	ACTGG	3 cut(s)	15, 676, 1600
BseRI	GAGGAG	1 cut(s)	798
BseSI	GKGCMC	2 cut(s)	1113, 1365
BseXI	GCAGC	7 cut(s)	240, 601, 664, 704, 805, 1735, 1750
BseYI	CCCAGC	2 cut(s)	887, 1623
BsgI	GTGCAG	4 cut(s)	82, 723, 812, 1830
Bsh1236I	CGCG	3 cut(s)	180, 497, 781
BshFI	GGCC	4 cut(s)	834, 1632, 1949, 1988
BsiHKCI	CYCGRG	1 cut(s)	157
BsiSI	CCGG	7 cut(s)	214, 225, 438, 471, 635, 1553, 1856
BslFI	GGGAC	3 cut(s)	251, 1428, 1811
BslI	CCNNNNNNNGG	8 cut(s)	305, 911, 1106, 1692, 1793, 1811, 1861, 1995
BsmAI	GTCTC	3 cut(s)	253, 1269, 1309
BsmBI	CGTCTC	1 cut(s)	253
BsmFI	GGGAC	3 cut(s)	251, 1428, 1811
BsmI	GAATGC	1 cut(s)	124
BsnI	GGCC	4 cut(s)	834, 1632, 1949, 1988
Bso31I	GGTCTC	1 cut(s)	1309
BsoBI	CYCGRG	1 cut(s)	157
Bsp119I	TTCGAA	2 cut(s)	255, 371
Bsp1286I	GDGCHC	2 cut(s)	1113, 1365
Bsp13I	TCCGGA	1 cut(s)	437
Bsp143I	GATC	6 cut(s)	547, 916, 1048, 1909, 2015, 2035
Bsp19I	CCATGG	3 cut(s)	1166, 1366, 1950
BspANI	GGCC	4 cut(s)	834, 1632, 1949, 1988
BspCNI	CTCAG	3 cut(s)	317, 1117, 1305
BspEI	TCCGGA	1 cut(s)	437
BspFNI	CGCG	3 cut(s)	180, 497, 781
BspLI	GGNNCC	5 cut(s)	218, 310, 1044, 1416, 1799
BspOI	GCTAGC	1 cut(s)	851
BspPI	GGATC	4 cut(s)	911, 1043, 1904, 2010
BspQI	GCTCTTC	1 cut(s)	548
BspT104I	TTCGAA	2 cut(s)	255, 371
BspTNI	GGTCTC	1 cut(s)	1309
BsrBI	CCGCTC	1 cut(s)	1979
BsrDI	GCAATG	1 cut(s)	2042
BsrI	ACTGG	3 cut(s)	15, 676, 1600
BssECI	CCNNGG	4 cut(s)	1166, 1366, 1633, 1950
BssMI	GATC	6 cut(s)	547, 916, 1048, 1909, 2015, 2035
BssNI	GRCGYC	1 cut(s)	1172
BssT1I	CCWWGG	4 cut(s)	1166, 1366, 1633, 1950
Bst2UI	CCWGG	1 cut(s)	515
Bst4CI	ACNGT	4 cut(s)	601, 619, 654, 686
Bst6I	CTCTTC	4 cut(s)	67, 72, 548, 1548
BstACI	GRCGYC	1 cut(s)	1172
BstAPI	GCANNNNNTGC	1 cut(s)	1088
BstBAI	YACGTR	2 cut(s)	10, 46
BstBI	TTCGAA	2 cut(s)	255, 371
BstC8I	GCNNGC	9 cut(s)	493, 594, 712, 779, 849, 1036, 1538, 1827, 2049
BstDEI	CTNAG	4 cut(s)	304, 325, 1125, 1313
BstDSI	CCRYGG	3 cut(s)	1166, 1366, 1950
BstENI	CCTNNNNNAGG	2 cut(s)	303, 1993
BstF5I	GGATG	5 cut(s)	141, 421, 449, 1192, 1851
BstFNI	CGCG	3 cut(s)	180, 497, 781
BstHHI	GCGC	2 cut(s)	497, 1931
BstKTI	GATC	6 cut(s)	550, 919, 1051, 1912, 2018, 2038
BstMAI	GTCTC	3 cut(s)	253, 1269, 1309
BstMBI	GATC	6 cut(s)	547, 916, 1048, 1909, 2015, 2035
BstNI	CCWGG	1 cut(s)	515
BstNSI	RCATGY	3 cut(s)	244, 1038, 1829
BstSCI	CCNGG	3 cut(s)	513, 634, 1854
BstSFI	CTRYAG	1 cut(s)	1342
BstSLI	GKGCMC	2 cut(s)	1113, 1365
BstUI	CGCG	3 cut(s)	180, 497, 781
BstV1I	GCAGC	7 cut(s)	240, 601, 664, 704, 805, 1735, 1750
BstV2I	GAAGAC	2 cut(s)	322, 1968
BstX2I	RGATCY	3 cut(s)	916, 1909, 2015
BstYI	RGATCY	3 cut(s)	916, 1909, 2015
Bsu36I	CCTNAGG	1 cut(s)	304
BsuRI	GGCC	4 cut(s)	834, 1632, 1949, 1988
BtgI	CCRYGG	3 cut(s)	1166, 1366, 1950
BtgZI	GCGATG	1 cut(s)	131
BtrI	CACGTC	1 cut(s)	1360
BtsCI	GGATG	5 cut(s)	141, 421, 449, 1192, 1851
BtsI	GCAGTG	1 cut(s)	486
BtsIMutI	CAGTG	3 cut(s)	486, 606, 691
Cac8I	GCNNGC	9 cut(s)	493, 594, 712, 779, 849, 1036, 1538, 1827, 2049
CaiI	CAGNNNCTG	3 cut(s)	658, 698, 1623
CfoI	GCGC	2 cut(s)	497, 1931
Cfr13I	GGNCC	4 cut(s)	971, 1415, 1798, 1841
CseI	GACGC	1 cut(s)	1180
Csp6I	GTAC	5 cut(s)	132, 462, 1139, 1666, 1721
CviQI	GTAC	5 cut(s)	132, 462, 1139, 1666, 1721
DdeI	CTNAG	4 cut(s)	304, 325, 1125, 1313
DpnI	GATC	6 cut(s)	549, 918, 1050, 1911, 2017, 2037
DpnII	GATC	6 cut(s)	547, 916, 1048, 1909, 2015, 2035
DraI	TTTAAA	1 cut(s)	1072
DrdI	GACNNNNNNGTC	3 cut(s)	55, 245, 1514
DseDI	GACNNNNNNGTC	3 cut(s)	55, 245, 1514
EaeI	YGGCCR	1 cut(s)	832
Eam1104I	CTCTTC	4 cut(s)	67, 72, 548, 1548
EarI	CTCTTC	4 cut(s)	67, 72, 548, 1548
EciI	GGCGGA	2 cut(s)	190, 442
Eco130I	CCWWGG	4 cut(s)	1166, 1366, 1633, 1950
Eco147I	AGGCCT	1 cut(s)	1988
Eco31I	GGTCTC	1 cut(s)	1309
Eco47I	GGWCC	4 cut(s)	971, 1415, 1798, 1841
Eco57I	CTGAAG	2 cut(s)	750, 1328
Eco72I	CACGTG	1 cut(s)	46
Eco81I	CCTNAGG	1 cut(s)	304
Eco88I	CYCGRG	1 cut(s)	157
EcoNI	CCTNNNNNAGG	2 cut(s)	303, 1993
EcoO109I	RGGNCCY	1 cut(s)	971
EcoRI	GAATTC	3 cut(s)	1184, 1269, 1865
EcoRII	CCWGG	1 cut(s)	513
EcoT14I	CCWWGG	4 cut(s)	1166, 1366, 1633, 1950
EcoT22I	ATGCAT	1 cut(s)	1255
ErhI	CCWWGG	4 cut(s)	1166, 1366, 1633, 1950
Esp3I	CGTCTC	1 cut(s)	253
FalI	AAGNNNNNCTT	4 cut(s)	544, 576, 1128, 1160
FaqI	GGGAC	3 cut(s)	251, 1428, 1811
Fnu4HI	GCNGC	9 cut(s)	178, 229, 590, 678, 693, 715, 794, 1749, 1764
FokI	GGATG	5 cut(s)	128, 428, 436, 1179, 1838
Fsp4HI	GCNGC	9 cut(s)	178, 229, 590, 678, 693, 715, 794, 1749, 1764
FspBI	CTAG	5 cut(s)	234, 848, 1265, 1653, 2052
GlaI	GCGC	2 cut(s)	496, 1930
GluI	GCNGC	9 cut(s)	178, 229, 590, 678, 693, 715, 794, 1749, 1764
GsaI	CCCAGC	2 cut(s)	891, 1627
GsuI	CTGGAG	1 cut(s)	693
HaeIII	GGCC	4 cut(s)	834, 1632, 1949, 1988
HapII	CCGG	7 cut(s)	214, 225, 438, 471, 635, 1553, 1856
HgaI	GACGC	1 cut(s)	1180
HhaI	GCGC	2 cut(s)	497, 1931
Hin1I	GRCGYC	1 cut(s)	1172
Hin6I	GCGC	2 cut(s)	495, 1929
HinP1I	GCGC	2 cut(s)	495, 1929
HincII	GTYRAC	1 cut(s)	482
HindII	GTYRAC	1 cut(s)	482
HindIII	AAGCTT	1 cut(s)	708
HpaII	CCGG	7 cut(s)	214, 225, 438, 471, 635, 1553, 1856
HphI	GGTGA	3 cut(s)	1517, 1826, 1993
Hpy166II	GTNNAC	3 cut(s)	482, 1666, 1675
Hpy188I	TCNGA	6 cut(s)	510, 668, 979, 1758, 1773, 2020
Hpy8I	GTNNAC	3 cut(s)	482, 1666, 1675
Hpy99I	CGWCG	2 cut(s)	317, 320
HpyAV	CCTTC	6 cut(s)	145, 309, 331, 984, 1939, 1978
HpyCH4III	ACNGT	4 cut(s)	601, 619, 654, 686
HpyCH4IV	ACGT	5 cut(s)	9, 45, 630, 817, 1359
HpyF3I	CTNAG	4 cut(s)	304, 325, 1125, 1313
HpySE526I	ACGT	5 cut(s)	9, 45, 630, 817, 1359
Hsp92I	GRCGYC	1 cut(s)	1172
HspAI	GCGC	2 cut(s)	495, 1929
Kpn2I	TCCGGA	1 cut(s)	437
Kzo9I	GATC	6 cut(s)	547, 916, 1048, 1909, 2015, 2035
LguI	GCTCTTC	1 cut(s)	548
LmnI	GCTCC	3 cut(s)	216, 674, 1976
Lsp1109I	GCAGC	7 cut(s)	240, 601, 664, 704, 805, 1735, 1750
LweI	GCATC	3 cut(s)	1240, 1697, 1879
MaeI	CTAG	5 cut(s)	234, 848, 1265, 1653, 2052
MaeII	ACGT	5 cut(s)	9, 45, 630, 817, 1359
MaeIII	GTNAC	5 cut(s)	46, 358, 526, 1207, 1505
MalI	GATC	6 cut(s)	549, 918, 1050, 1911, 2017, 2037
MbiI	CCGCTC	1 cut(s)	1979
MboI	GATC	6 cut(s)	547, 916, 1048, 1909, 2015, 2035
MfeI	CAATTG	1 cut(s)	1678
MflI	RGATCY	3 cut(s)	916, 1909, 2015
MhlI	GDGCHC	2 cut(s)	1113, 1365
MlsI	TGGCCA	1 cut(s)	834
MluNI	TGGCCA	1 cut(s)	834
MlyI	GAGTC	5 cut(s)	203, 487, 514, 847, 1390
MmeI	TCCRAC	4 cut(s)	52, 387, 873, 1796
Mox20I	TGGCCA	1 cut(s)	834
Mph1103I	ATGCAT	1 cut(s)	1255
MroI	TCCGGA	1 cut(s)	437
MroXI	GAANNNNTTC	1 cut(s)	1184
MscI	TGGCCA	1 cut(s)	834
MseI	TTAA	6 cut(s)	645, 1004, 1071, 1256, 1331, 1920
MslI	CAYNNNNRTG	2 cut(s)	1116, 1731
Msp20I	TGGCCA	1 cut(s)	834
MspA1I	CMGCKG	1 cut(s)	592
MspI	CCGG	7 cut(s)	214, 225, 438, 471, 635, 1553, 1856
MspR9I	CCNGG	3 cut(s)	515, 636, 1856
MunI	CAATTG	1 cut(s)	1678
Mva1269I	GAATGC	1 cut(s)	124
MvaI	CCWGG	1 cut(s)	515
MvnI	CGCG	3 cut(s)	180, 497, 781
NciI	CCSGG	2 cut(s)	636, 1856
NcoI	CCATGG	3 cut(s)	1166, 1366, 1950
NdeII	GATC	6 cut(s)	547, 916, 1048, 1909, 2015, 2035
NheI	GCTAGC	1 cut(s)	847
NlaIV	GGNNCC	5 cut(s)	218, 310, 1044, 1416, 1799
NmuCI	GTSAC	3 cut(s)	46, 1207, 1505
NsiI	ATGCAT	1 cut(s)	1255
NspI	RCATGY	3 cut(s)	244, 1038, 1829
NspV	TTCGAA	2 cut(s)	255, 371
PaeI	GCATGC	2 cut(s)	1038, 1829
PaeR7I	CTCGAG	1 cut(s)	157
PceI	AGGCCT	1 cut(s)	1988
PciI	ACATGT	1 cut(s)	240
PciSI	GCTCTTC	1 cut(s)	548
PcsI	WCGNNNNNNNCGW	1 cut(s)	473
PctI	GAATGC	1 cut(s)	124
PdmI	GAANNNNTTC	1 cut(s)	1184
PfeI	GAWTC	5 cut(s)	166, 182, 443, 1055, 1658
PflFI	GACNNNGTC	1 cut(s)	1967
PflMI	CCANNNNNTGG	1 cut(s)	1106
PfoI	TCCNGGA	1 cut(s)	634
PkrI	GCNGC	9 cut(s)	179, 230, 591, 679, 694, 716, 795, 1750, 1765
PleI	GAGTC	5 cut(s)	202, 486, 513, 847, 1389
PmaCI	CACGTG	1 cut(s)	46
PmlI	CACGTG	1 cut(s)	46
PpsI	GAGTC	5 cut(s)	202, 486, 513, 847, 1389
Ppu21I	YACGTR	2 cut(s)	10, 46
PpuMI	RGGWCCY	1 cut(s)	971
PscI	ACATGT	1 cut(s)	240
PshBI	ATTAAT	1 cut(s)	1256
Psp1406I	AACGTT	1 cut(s)	817
Psp5II	RGGWCCY	1 cut(s)	971
Psp6I	CCWGG	1 cut(s)	513
PspCI	CACGTG	1 cut(s)	46
PspFI	CCCAGC	2 cut(s)	887, 1623
PspGI	CCWGG	1 cut(s)	513
PspN4I	GGNNCC	5 cut(s)	218, 310, 1044, 1416, 1799
PspPI	GGNCC	4 cut(s)	971, 1415, 1798, 1841
PspPPI	RGGWCCY	1 cut(s)	971
PstNI	CAGNNNCTG	3 cut(s)	658, 698, 1623
PsuI	RGATCY	3 cut(s)	916, 1909, 2015
PsyI	GACNNNGTC	1 cut(s)	1967
PvuII	CAGCTG	1 cut(s)	592
RsaI	GTAC	5 cut(s)	133, 463, 1140, 1667, 1722
RsaNI	GTAC	5 cut(s)	132, 462, 1139, 1666, 1721
RseI	CAYNNNNRTG	2 cut(s)	1116, 1731
SapI	GCTCTTC	1 cut(s)	548
SaqAI	TTAA	6 cut(s)	645, 1004, 1071, 1256, 1331, 1920
SatI	GCNGC	9 cut(s)	178, 229, 590, 678, 693, 715, 794, 1749, 1764
Sau3AI	GATC	6 cut(s)	547, 916, 1048, 1909, 2015, 2035
Sau96I	GGNCC	4 cut(s)	971, 1415, 1798, 1841
SchI	GAGTC	5 cut(s)	203, 487, 514, 847, 1390
ScrFI	CCNGG	3 cut(s)	515, 636, 1856
SduI	GDGCHC	2 cut(s)	1113, 1365
SfaNI	GCATC	3 cut(s)	1240, 1697, 1879
SfcI	CTRYAG	1 cut(s)	1342
Sfr274I	CTCGAG	1 cut(s)	157
SfuI	TTCGAA	2 cut(s)	255, 371
SinI	GGWCC	4 cut(s)	971, 1415, 1798, 1841
SlaI	CTCGAG	1 cut(s)	157
SmiMI	CAYNNNNRTG	2 cut(s)	1116, 1731
SmlI	CTYRAG	1 cut(s)	157
SmoI	CTYRAG	1 cut(s)	157
SphI	GCATGC	2 cut(s)	1038, 1829
SseBI	AGGCCT	1 cut(s)	1988
SspI	AATATT	1 cut(s)	1423
SspMI	CTAG	5 cut(s)	234, 848, 1265, 1653, 2052
StuI	AGGCCT	1 cut(s)	1988
StyD4I	CCNGG	3 cut(s)	513, 634, 1854
StyI	CCWWGG	4 cut(s)	1166, 1366, 1633, 1950
TaaI	ACNGT	4 cut(s)	601, 619, 654, 686
TaiI	ACGT	5 cut(s)	12, 48, 633, 820, 1362
TaqI	TCGA	9 cut(s)	110, 158, 255, 371, 476, 546, 736, 1248, 1273
TaqII	GACCGA	3 cut(s)	1432, 1580, 1829
TatI	WGTACW	1 cut(s)	1665
TauI	GCSGC	2 cut(s)	180, 717
TfiI	GAWTC	5 cut(s)	166, 182, 443, 1055, 1658
Tru1I	TTAA	6 cut(s)	645, 1004, 1071, 1256, 1331, 1920
Tru9I	TTAA	6 cut(s)	645, 1004, 1071, 1256, 1331, 1920
TscAI	CASTG	3 cut(s)	493, 606, 691
TseFI	GTSAC	3 cut(s)	46, 1207, 1505
TseI	GCWGC	7 cut(s)	228, 589, 677, 692, 793, 1748, 1763
Tsp45I	GTSAC	3 cut(s)	46, 1207, 1505
TspDTI	ATGAA	5 cut(s)	328, 1136, 1197, 1482, 1982
TspGWI	ACGGA	6 cut(s)	235, 301, 449, 627, 737, 738
TspRI	CASTG	3 cut(s)	493, 606, 691
Tth111I	GACNNNGTC	1 cut(s)	1967
Van91I	CCANNNNNTGG	1 cut(s)	1106
VpaK11BI	GGWCC	4 cut(s)	971, 1415, 1798, 1841
VspI	ATTAAT	1 cut(s)	1256
XagI	CCTNNNNNAGG	2 cut(s)	303, 1993
XapI	RAATTY	6 cut(s)	373, 433, 862, 1184, 1269, 1865
XceI	RCATGY	3 cut(s)	244, 1038, 1829
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1488
XhoI	CTCGAG	1 cut(s)	157
XmnI	GAANNNNTTC	1 cut(s)	1184
XspI	CTAG	5 cut(s)	234, 848, 1265, 1653, 2052
Zsp2I	ATGCAT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.