Rmu_sc0008044.1_g000002

Sterol 3-beta-glucosyltransferase UGT80A2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008044.1
OG0001484
Physical Location & Seq
Forward (+)
2989 .. 7015
4027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008044.1_g000002.1.cds

Sequence Viewer

Length: 1098 bp
atgtttacttccgtctattacgacgcacacctcgacgctagcgacgccaatggcagcagcagctcctcttcagggtttacagagaggcatgtgccagtagaagcctccggagaattgtcgaatgccggaaacggttccggaaactataccggaacctcatcgggttcgagttccggtcagcttgatacaggcccgaaattgaatcagagtcagtcattagctctatatctaaccagactcttcgacgaaaaaatccctttcagaaaaaagcttaagcatataaaacgagtggcaacagttacggataacgggactgtgcaattcgacgttccgggagatgttaaaccgcatttactggattttggaaccggagttgtttatgatgaagagagttccggtgcatcggaaaatgtgcctgatatacctccactgcaaattgtaatgctgattgttggtacgcgaggagatgttcagccatttgttgctattggaaaaaaattgcaggaatatggccatagggttaggctagcaactcatgcaaatttcaaagattttgtccttactgctgggttggagttctttcctttaggtggagatccgaaagttcttgctgaatatatggtcaagaacaaaggtttcttgccatcgggaccttcggaagtatctattcagcgacagcaaatgaaagaaataatattttctttacttcctgcgtgcaaggaacctgatcctgataccaaagtcccgtttaaagcagatgcaataattgccaacccaccagcatatgggcactctcatgttgctgaggcactaaaagtaccgattcatatattttttacaatgccatggacgcctacgagtgaattccctcatcctctatcccgtgtcaagcaacatattggatatagactatcatatcaaatagtcgatgcattaatttggctaggaattcgagacatgataaatgagtttagaaagaaaatgctgaagctgagacgtaccacatatttaagtggatactatagtactcctcctgacgttccctatgggtatatatggagtcctcatcttgttcccaaacctaaaggtcatatttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_28 UDPGT

Protein Analysis

365

Amino Acids

40.27

Weight (kDa)

8.37

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 785
AccII CGCG 1 cut(s) 460
AccIII TCCGGA 2 cut(s) 107, 137
AciI CCGC 1 cut(s) 347
AclWI GGATC 2 cut(s) 590, 722
AcoI YGGCCR 1 cut(s) 511
AcsI RAATTY 3 cut(s) 541, 863, 948
AcuI CTGAAG 2 cut(s) 54, 1007
AcyI GRCGYC 2 cut(s) 45, 851
AfaI GTAC 4 cut(s) 457, 819, 1000, 1027
AfiI CCNNNNNNNGG 3 cut(s) 72, 590, 785
AflII CTTAAG 1 cut(s) 272
AgsI TTSAA 2 cut(s) 202, 547
AluBI AGCT 5 cut(s) 63, 181, 221, 271, 991
AluI AGCT 5 cut(s) 63, 181, 221, 271, 991
Alw26I GTCTC 2 cut(s) 948, 988
AlwI GGATC 2 cut(s) 590, 722
Aor13HI TCCGGA 2 cut(s) 107, 137
AoxI GGCC 2 cut(s) 190, 511
ApeKI GCWGC 3 cut(s) 54, 57, 60
ApoI RAATTY 3 cut(s) 541, 863, 948
ArsI GACNNNNNNTTYG 2 cut(s) 540, 572
AseI ATTAAT 1 cut(s) 935
Asp700I GAANNNNTTC 1 cut(s) 133
AspS9I GGNCC 2 cut(s) 191, 650
AsuC2I CCSGG 1 cut(s) 333
AsuNHI GCTAGC 2 cut(s) 38, 526
AvaII GGWCC 1 cut(s) 650
BaeGI GKGCMC 1 cut(s) 792
BaeI ACNNNNGTAYC 4 cut(s) 726, 759, 1009, 1042
BalI TGGCCA 1 cut(s) 513
BbvCI CCTCAGC 1 cut(s) 804
BbvI GCAGC 3 cut(s) 66, 69, 72
BccI CCATC 1 cut(s) 652
BciVI GTATCC 1 cut(s) 1010
BcnI CCSGG 1 cut(s) 333
BcoDI GTCTC 2 cut(s) 948, 988
BfaI CTAG 3 cut(s) 39, 527, 944
BfmI CTRYAG 1 cut(s) 1021
BfrI CTTAAG 1 cut(s) 272
BfuI GTATCC 1 cut(s) 1010
BisI GCNGC 3 cut(s) 55, 58, 61
BlsI GCNGC 3 cut(s) 56, 59, 62
BmcAI AGTACT 1 cut(s) 1027
Bme1390I CCNGG 1 cut(s) 333
Bme18I GGWCC 1 cut(s) 650
BmgT120I GGNCC 2 cut(s) 191, 650
BmiI GGNNCC 5 cut(s) 136, 154, 367, 651, 723
BmrFI CCNGG 1 cut(s) 333
BmsI GCATC 3 cut(s) 410, 748, 919
BmtI GCTAGC 2 cut(s) 42, 530
Bpu10I CCTNAGC 1 cut(s) 804
BpuMI CCSGG 1 cut(s) 333
BsaHI GRCGYC 2 cut(s) 45, 851
BsaJI CCNNGG 1 cut(s) 845
BsaWI WCCGGW 6 cut(s) 107, 137, 149, 173, 368, 395
Bsc4I CCNNNNNNNGG 3 cut(s) 72, 590, 785
Bse1I ACTGG 2 cut(s) 95, 360
BseAI TCCGGA 2 cut(s) 107, 137
BseDI CCNNGG 1 cut(s) 845
BseGI GGATG 1 cut(s) 871
BseLI CCNNNNNNNGG 3 cut(s) 72, 590, 785
BseMII CTCAG 2 cut(s) 795, 983
BseNI ACTGG 2 cut(s) 95, 360
BseRI GAGGAG 3 cut(s) 55, 477, 1020
BseSI GKGCMC 1 cut(s) 792
BseXI GCAGC 3 cut(s) 66, 69, 72
BseYI CCCAGC 1 cut(s) 566
Bsh1236I CGCG 1 cut(s) 460
BshFI GGCC 2 cut(s) 192, 513
BsiSI CCGG 8 cut(s) 108, 126, 138, 150, 174, 332, 369, 396
BslFI GGGAC 3 cut(s) 325, 663, 728
BslI CCNNNNNNNGG 3 cut(s) 72, 590, 785
BsmAI GTCTC 2 cut(s) 948, 988
BsmBI CGTCTC 1 cut(s) 988
BsmFI GGGAC 3 cut(s) 325, 663, 728
BsmI GAATGC 1 cut(s) 127
BsnI GGCC 2 cut(s) 192, 513
Bsp1286I GDGCHC 1 cut(s) 792
Bsp13I TCCGGA 2 cut(s) 107, 137
Bsp143I GATC 2 cut(s) 595, 727
Bsp19I CCATGG 1 cut(s) 845
BspACI CCGC 1 cut(s) 347
BspANI GGCC 2 cut(s) 192, 513
BspCNI CTCAG 2 cut(s) 796, 984
BspEI TCCGGA 2 cut(s) 107, 137
BspFNI CGCG 1 cut(s) 460
BspLI GGNNCC 5 cut(s) 136, 154, 367, 651, 723
BspOI GCTAGC 2 cut(s) 42, 530
BspPI GGATC 2 cut(s) 590, 722
BspTI CTTAAG 1 cut(s) 272
BsrI ACTGG 2 cut(s) 95, 360
BssECI CCNNGG 1 cut(s) 845
BssMI GATC 2 cut(s) 595, 727
BssNI GRCGYC 2 cut(s) 45, 851
BssT1I CCWWGG 1 cut(s) 845
Bst4CI ACNGT 3 cut(s) 134, 298, 316
Bst6I CTCTTC 3 cut(s) 73, 245, 381
BstACI GRCGYC 2 cut(s) 45, 851
BstAFI CTTAAG 1 cut(s) 272
BstAPI GCANNNNNTGC 2 cut(s) 536, 767
BstC8I GCNNGC 3 cut(s) 40, 528, 715
BstDEI CTNAG 2 cut(s) 804, 992
BstDSI CCRYGG 1 cut(s) 845
BstF5I GGATG 1 cut(s) 871
BstFNI CGCG 1 cut(s) 460
BstKTI GATC 2 cut(s) 598, 730
BstMAI GTCTC 2 cut(s) 948, 988
BstMBI GATC 2 cut(s) 595, 727
BstMWI GCNNNNNNNGC 5 cut(s) 44, 60, 536, 767, 850
BstNSI RCATGY 1 cut(s) 92
BstSCI CCNGG 1 cut(s) 331
BstSFI CTRYAG 1 cut(s) 1021
BstSLI GKGCMC 1 cut(s) 792
BstUI CGCG 1 cut(s) 460
BstV1I GCAGC 3 cut(s) 66, 69, 72
BstX2I RGATCY 1 cut(s) 595
BstYI RGATCY 1 cut(s) 595
BsuI GTATCC 1 cut(s) 1010
BsuRI GGCC 2 cut(s) 192, 513
BtgI CCRYGG 1 cut(s) 845
BtsCI GGATG 1 cut(s) 871
BtsI GCAGTG 1 cut(s) 428
BtsIMutI CAGTG 1 cut(s) 428
Cac8I GCNNGC 3 cut(s) 40, 528, 715
Cfr13I GGNCC 2 cut(s) 191, 650
CseI GACGC 4 cut(s) 32, 44, 53, 859
Csp6I GTAC 4 cut(s) 456, 818, 999, 1026
CviAII CATG 5 cut(s) 89, 536, 797, 846, 958
CviQI GTAC 4 cut(s) 456, 818, 999, 1026
DdeI CTNAG 2 cut(s) 804, 992
DpnI GATC 2 cut(s) 597, 729
DpnII GATC 2 cut(s) 595, 727
DraI TTTAAA 1 cut(s) 751
EaeI YGGCCR 1 cut(s) 511
Eam1104I CTCTTC 3 cut(s) 73, 245, 381
EarI CTCTTC 3 cut(s) 73, 245, 381
Eco130I CCWWGG 1 cut(s) 845
Eco47I GGWCC 1 cut(s) 650
Eco57I CTGAAG 2 cut(s) 54, 1007
EcoO109I RGGNCCY 1 cut(s) 650
EcoRI GAATTC 2 cut(s) 863, 948
EcoT14I CCWWGG 1 cut(s) 845
EcoT22I ATGCAT 1 cut(s) 934
ErhI CCWWGG 1 cut(s) 845
Esp3I CGTCTC 1 cut(s) 988
FaeI CATG 5 cut(s) 92, 539, 800, 849, 961
FaqI GGGAC 3 cut(s) 325, 663, 728
FatI CATG 5 cut(s) 88, 535, 796, 845, 957
FauNDI CATATG 1 cut(s) 784
Fnu4HI GCNGC 3 cut(s) 55, 58, 61
FokI GGATG 1 cut(s) 858
Fsp4HI GCNGC 3 cut(s) 55, 58, 61
FspBI CTAG 3 cut(s) 39, 527, 944
GluI GCNGC 3 cut(s) 55, 58, 61
GsaI CCCAGC 1 cut(s) 570
HaeIII GGCC 2 cut(s) 192, 513
HapII CCGG 8 cut(s) 108, 126, 138, 150, 174, 332, 369, 396
HgaI GACGC 4 cut(s) 32, 44, 53, 859
Hin1I GRCGYC 2 cut(s) 45, 851
Hin1II CATG 5 cut(s) 92, 539, 800, 849, 961
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 5 cut(s) 202, 208, 237, 823, 1060
HpaII CCGG 8 cut(s) 108, 126, 138, 150, 174, 332, 369, 396
Hpy166II GTNNAC 2 cut(s) 6, 78
Hpy188I TCNGA 5 cut(s) 207, 263, 406, 600, 658
Hpy188III TCNNGA 7 cut(s) 108, 138, 625, 648, 731, 953, 1034
Hpy8I GTNNAC 2 cut(s) 6, 78
Hpy99I CGWCG 5 cut(s) 26, 38, 47, 248, 329
HpyAV CCTTC 1 cut(s) 663
HpyCH4III ACNGT 3 cut(s) 134, 298, 316
HpyCH4IV ACGT 3 cut(s) 327, 997, 1038
HpyCH4V TGCA 8 cut(s) 319, 401, 433, 502, 539, 717, 761, 932
HpyF10VI GCNNNNNNNGC 5 cut(s) 44, 60, 536, 767, 850
HpyF3I CTNAG 2 cut(s) 804, 992
HpySE526I ACGT 3 cut(s) 327, 997, 1038
Hsp92I GRCGYC 2 cut(s) 45, 851
Hsp92II CATG 5 cut(s) 92, 539, 800, 849, 961
Kpn2I TCCGGA 2 cut(s) 107, 137
Kzo9I GATC 2 cut(s) 595, 727
LmnI GCTCC 1 cut(s) 68
Lsp1109I GCAGC 3 cut(s) 66, 69, 72
LweI GCATC 3 cut(s) 410, 748, 919
MaeI CTAG 3 cut(s) 39, 527, 944
MaeII ACGT 3 cut(s) 327, 997, 1038
MaeIII GTNAC 1 cut(s) 298
MalI GATC 2 cut(s) 597, 729
MboI GATC 2 cut(s) 595, 727
MboII GAAGA 3 cut(s) 60, 232, 398
MflI RGATCY 1 cut(s) 595
MhlI GDGCHC 1 cut(s) 792
MlsI TGGCCA 1 cut(s) 513
MluNI TGGCCA 1 cut(s) 513
MlyI GAGTC 3 cut(s) 217, 231, 1069
MmeI TCCRAC 1 cut(s) 552
Mox20I TGGCCA 1 cut(s) 513
Mph1103I ATGCAT 1 cut(s) 934
MroI TCCGGA 2 cut(s) 107, 137
MroXI GAANNNNTTC 1 cut(s) 133
MscI TGGCCA 1 cut(s) 513
MseI TTAA 6 cut(s) 273, 342, 750, 935, 1010, 1096
MslI CAYNNNNRTG 1 cut(s) 795
Msp20I TGGCCA 1 cut(s) 513
MspCI CTTAAG 1 cut(s) 272
MspI CCGG 8 cut(s) 108, 126, 138, 150, 174, 332, 369, 396
MspR9I CCNGG 1 cut(s) 333
Mva1269I GAATGC 1 cut(s) 127
MvnI CGCG 1 cut(s) 460
MwoI GCNNNNNNNGC 5 cut(s) 44, 60, 536, 767, 850
NciI CCSGG 1 cut(s) 333
NcoI CCATGG 1 cut(s) 845
NdeI CATATG 1 cut(s) 784
NdeII GATC 2 cut(s) 595, 727
NheI GCTAGC 2 cut(s) 38, 526
NlaIII CATG 5 cut(s) 92, 539, 800, 849, 961
NlaIV GGNNCC 5 cut(s) 136, 154, 367, 651, 723
NsiI ATGCAT 1 cut(s) 934
NspI RCATGY 1 cut(s) 92
PcsI WCGNNNNNNNCGW 2 cut(s) 30, 39
PctI GAATGC 1 cut(s) 127
PdmI GAANNNNTTC 1 cut(s) 133
PfeI GAWTC 2 cut(s) 202, 823
PflMI CCANNNNNTGG 1 cut(s) 785
PfoI TCCNGGA 1 cut(s) 331
PkrI GCNGC 3 cut(s) 56, 59, 62
PleI GAGTC 3 cut(s) 216, 231, 1068
PpsI GAGTC 3 cut(s) 216, 231, 1068
PpuMI RGGWCCY 1 cut(s) 650
PshBI ATTAAT 1 cut(s) 935
Psp5II RGGWCCY 1 cut(s) 650
PspFI CCCAGC 1 cut(s) 566
PspN4I GGNNCC 5 cut(s) 136, 154, 367, 651, 723
PspPI GGNCC 2 cut(s) 191, 650
PspPPI RGGWCCY 1 cut(s) 650
PsuI RGATCY 1 cut(s) 595
RsaI GTAC 4 cut(s) 457, 819, 1000, 1027
RsaNI GTAC 4 cut(s) 456, 818, 999, 1026
RseI CAYNNNNRTG 1 cut(s) 795
SaqAI TTAA 6 cut(s) 273, 342, 750, 935, 1010, 1096
SatI GCNGC 3 cut(s) 55, 58, 61
Sau3AI GATC 2 cut(s) 595, 727
Sau96I GGNCC 2 cut(s) 191, 650
ScaI AGTACT 1 cut(s) 1027
SchI GAGTC 3 cut(s) 217, 231, 1069
ScrFI CCNGG 1 cut(s) 333
SduI GDGCHC 1 cut(s) 792
SfaNI GCATC 3 cut(s) 410, 748, 919
SfcI CTRYAG 1 cut(s) 1021
SinI GGWCC 1 cut(s) 650
SmiMI CAYNNNNRTG 1 cut(s) 795
SmlI CTYRAG 1 cut(s) 272
SmoI CTYRAG 1 cut(s) 272
SsiI CCGC 1 cut(s) 347
SspI AATATT 1 cut(s) 696
SspMI CTAG 3 cut(s) 39, 527, 944
StyD4I CCNGG 1 cut(s) 331
StyI CCWWGG 1 cut(s) 845
TaaI ACNGT 3 cut(s) 134, 298, 316
TaiI ACGT 3 cut(s) 330, 1000, 1041
TaqI TCGA 7 cut(s) 33, 119, 167, 243, 324, 927, 952
TatI WGTACW 1 cut(s) 1025
TfiI GAWTC 2 cut(s) 202, 823
Tru1I TTAA 6 cut(s) 273, 342, 750, 935, 1010, 1096
Tru9I TTAA 6 cut(s) 273, 342, 750, 935, 1010, 1096
TscAI CASTG 1 cut(s) 435
TseI GCWGC 3 cut(s) 54, 57, 60
TspDTI ATGAA 3 cut(s) 399, 698, 815
TspGWI ACGGA 1 cut(s) 317
TspRI CASTG 1 cut(s) 435
Van91I CCANNNNNTGG 1 cut(s) 785
Vha464I CTTAAG 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 650
VspI ATTAAT 1 cut(s) 935
XapI RAATTY 3 cut(s) 541, 863, 948
XceI RCATGY 1 cut(s) 92
XmnI GAANNNNTTC 1 cut(s) 133
XspI CTAG 3 cut(s) 39, 527, 944
ZrmI AGTACT 1 cut(s) 1027
Zsp2I ATGCAT 1 cut(s) 934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.