Rh6CG286200

Sterol 3-beta-glucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0001484
Physical Location & Seq
Forward (+)
46402215 .. 46409724
7510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG286200.1

Sequence Viewer

Length: 1356 bp
ATGAAGCACACCATCATCACTCATACCCCTCCATCGCCACCCACTTTTATCGAACGTGCCCGTCTCTTCCGGACAGAATCCAATTCTCTCTTTCTTTTTCTTCTCCGATTCTCTCTCTCCCTCTCCCTCTCCGATTCTCAATTTCGAATCTCACAGCGTTCTCAGAATCCAAGCCACGCTCTTCTTCTTCTTCTCGCTTCCGATCTGGATCAGGACCGGCCGCGCGGTCCGGAGTGTCATCCGGAACAGGCGGCGGTGATGGCGGACGATCGCCGGAGTAGTTCCGAGAGTTCTGTAGAAGTTGCGGGGAGAATTGAGCAGGAAATTGACGGCGGAAGTGGCGGGAAAAGATTAGAGTTGGAGAACGGAGAGGCTAGTGGCGGAGGCGGAGGCGTTACTGCTCCGGTGAATAACGGCGGCGGCAGTAGCTCTACAGGGAATTCAGGAAGTTCTGGCTTTAGCTTTTCGAAAACGAACGCATTGCCAGTGGAGATATCACCGACTCATGAAAGGCCAGAACCACATTCAGTTCCAGCAAAGCTGGAGAGATCAAAAACGGAGAGCACCAGACCTAATGTATTGTCCAAAGAGGCAGCAAAGATTTTTGACGACAAAACTTCAGTCCATCAGAAGTTAAAGCTGTTAAATAGAATAGCCACTGTGAAAGATGACGGAACTGTAGAATTCGATGTTCCAGGGGATGTTGAATCTGAATCTTTTGGTGTTGGATCCACTGCTGGTTGTACCGATGTTGCTGATGAGCCTCTTGATGCAACAGAGCTCCAATGCATACCACCAATGCAAATTGTAATGCTTATTGTTGGAACGCGTGGAGATGTGCAGCCGTTTATTGCAATTGGCAAGCGTTTGCAGGTTGATGTGGTGGGATTTTGCTTCCTTGATCTTGCATCAAATTATGAACCTCCACAACCACTAGTGGAATGGCTTAAAGCTGGTGACAAGCCTATATACATTGGGTTTGGTAGCCTTGTGCATCATGGAGGTGCTGGAACAACGGCTGCTGGTCTAAAAGCTGCATGTCCGACAACAATTGTTCCTTTCTTTGGAGACCAACCCTTCTGGGGAGAGCGAGTACATGCCAGGGGAGTAGGCCCTGCACCCATTGCAGTTGATGAGTTCTCACTTCCCAAATTGGTTGATGCTATAAATTACATGCTTGATCCCAAGGTGAAGGAGCGTGCTATTGAACTTGCCAAGGATATGGAGAATGAGGATGGTGTGACAGGAGCAGTCATGGCCTTCTTTAAGCATCTTCCTCGCAAAAAGCCCGAGTCTGAGCCAGAAACAGAGTCATCGAGCCTTTGCTCTATAAGTAGATGTTTTGGTTGTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_28 UDPGT

Protein Analysis

451

Amino Acids

48.37

Weight (kDa)

5.28

Isoelectric Point (pI)

48.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EryCIII-like_C PF06722 329 - 410 2.8e-08 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 862
AccII CGCG 3 cut(s) 223, 225, 829
AccIII TCCGGA 3 cut(s) 69, 229, 241
AclWI GGATC 4 cut(s) 216, 723, 736, 1175
AcoI YGGCCR 1 cut(s) 218
AcsI RAATTY 2 cut(s) 439, 683
AcuI CTGAAG 1 cut(s) 603
AfaI GTAC 2 cut(s) 745, 1095
AfiI CCNNNNNNNGG 2 cut(s) 1064, 1082
AflIII ACRYGT 1 cut(s) 827
AgsI TTSAA 2 cut(s) 707, 1208
AhlI ACTAGT 1 cut(s) 934
AjnI CCWGG 2 cut(s) 694, 1100
AluBI AGCT 7 cut(s) 429, 462, 541, 640, 781, 953, 1034
AluI AGCT 7 cut(s) 429, 462, 541, 640, 781, 953, 1034
Alw21I GWGCWC 2 cut(s) 566, 783
Alw26I GTCTC 2 cut(s) 68, 1062
AlwI GGATC 4 cut(s) 216, 723, 736, 1175
Ama87I CYCGRG 1 cut(s) 1289
Aor13HI TCCGGA 3 cut(s) 69, 229, 241
AoxI GGCC 4 cut(s) 218, 512, 1111, 1257
ApeKI GCWGC 4 cut(s) 593, 841, 1019, 1034
ApoI RAATTY 2 cut(s) 439, 683
ArsI GACNNNNNNTTYG 2 cut(s) 606, 638
AspLEI GCGC 1 cut(s) 225
AspS9I GGNCC 3 cut(s) 214, 227, 1112
AsuHPI GGTGA 5 cut(s) 268, 418, 489, 968, 1201
AsuII TTCGAA 2 cut(s) 145, 467
AvaI CYCGRG 1 cut(s) 1289
AvaII GGWCC 2 cut(s) 214, 227
BaeGI GKGCMC 1 cut(s) 61
BamHI GGATCC 1 cut(s) 728
BanII GRGCYC 1 cut(s) 783
Bbv12I GWGCWC 2 cut(s) 566, 783
BbvI GCAGC 4 cut(s) 605, 853, 1006, 1021
BccI CCATC 5 cut(s) 20, 40, 253, 633, 1229
BceAI ACGGC 4 cut(s) 346, 430, 829, 1032
BcgI CGANNNNNNTGC 4 cut(s) 463, 497, 1259, 1293
BciT130I CCWGG 2 cut(s) 696, 1102
BcoDI GTCTC 2 cut(s) 68, 1062
BcuI ACTAGT 1 cut(s) 934
BfaI CTAG 2 cut(s) 375, 935
BfmI CTRYAG 3 cut(s) 294, 432, 678
BfuAI ACCTGC 1 cut(s) 862
BisI GCNGC 8 cut(s) 221, 252, 418, 421, 594, 842, 1020, 1035
BlsI GCNGC 8 cut(s) 222, 253, 419, 422, 595, 843, 1021, 1036
Bme1390I CCNGG 2 cut(s) 696, 1102
Bme18I GGWCC 2 cut(s) 214, 227
BmeT110I CYCGRG 1 cut(s) 1289
BmgT120I GGNCC 3 cut(s) 214, 227, 1112
BmiI GGNNCC 1 cut(s) 730
BmrFI CCNGG 2 cut(s) 696, 1102
BmsI GCATC 5 cut(s) 760, 917, 1003, 1150, 1279
BpmI CTGGAG 1 cut(s) 563
Bpu14I TTCGAA 2 cut(s) 145, 467
BsaBI GATNNNNATC 1 cut(s) 207
BsaI GGTCTC 1 cut(s) 1062
BsaJI CCNNGG 4 cut(s) 695, 1101, 1185, 1215
BsaWI WCCGGW 4 cut(s) 69, 229, 241, 403
BsaXI ACNNNNNCTCC 2 cut(s) 1077, 1107
Bsc4I CCNNNNNNNGG 2 cut(s) 1064, 1082
Bse118I RCCGGY 1 cut(s) 216
Bse1I ACTGG 1 cut(s) 485
Bse3DI GCAATG 2 cut(s) 479, 1122
Bse8I GATNNNNATC 1 cut(s) 207
BseAI TCCGGA 3 cut(s) 69, 229, 241
BseBI CCWGG 2 cut(s) 696, 1102
BseDI CCNNGG 4 cut(s) 695, 1101, 1185, 1215
BseGI GGATG 3 cut(s) 238, 706, 1240
BseJI GATNNNNATC 1 cut(s) 207
BseLI CCNNNNNNNGG 2 cut(s) 1064, 1082
BseMI GCAATG 2 cut(s) 479, 1122
BseMII CTCAG 2 cut(s) 176, 1287
BseNI ACTGG 1 cut(s) 485
BseSI GKGCMC 1 cut(s) 61
BseX3I CGGCCG 1 cut(s) 218
BseXI GCAGC 4 cut(s) 605, 853, 1006, 1021
BsgI GTGCAG 2 cut(s) 860, 1101
Bsh1236I CGCG 3 cut(s) 223, 225, 829
Bsh1285I CGRYCG 2 cut(s) 221, 271
BshFI GGCC 4 cut(s) 220, 514, 1113, 1259
BsiEI CGRYCG 2 cut(s) 221, 271
BsiHKAI GWGCWC 2 cut(s) 566, 783
BsiHKCI CYCGRG 1 cut(s) 1289
BsiSI CCGG 6 cut(s) 70, 217, 230, 242, 274, 404
BslI CCNNNNNNNGG 2 cut(s) 1064, 1082
BsmAI GTCTC 2 cut(s) 68, 1062
BsmBI CGTCTC 1 cut(s) 68
BsnI GGCC 4 cut(s) 220, 514, 1113, 1259
Bso31I GGTCTC 1 cut(s) 1062
BsoBI CYCGRG 1 cut(s) 1289
Bsp119I TTCGAA 2 cut(s) 145, 467
Bsp1286I GDGCHC 3 cut(s) 61, 566, 783
Bsp13I TCCGGA 3 cut(s) 69, 229, 241
Bsp143I GATC 7 cut(s) 202, 208, 268, 548, 728, 901, 1180
BspANI GGCC 4 cut(s) 220, 514, 1113, 1259
BspCNI CTCAG 2 cut(s) 175, 1288
BspEI TCCGGA 3 cut(s) 69, 229, 241
BspFNI CGCG 3 cut(s) 223, 225, 829
BspHI TCATGA 1 cut(s) 505
BspLI GGNNCC 1 cut(s) 730
BspMI ACCTGC 1 cut(s) 862
BspPI GGATC 4 cut(s) 216, 723, 736, 1175
BspQI GCTCTTC 1 cut(s) 186
BspT104I TTCGAA 2 cut(s) 145, 467
BspTNI GGTCTC 1 cut(s) 1062
BsrDI GCAATG 2 cut(s) 479, 1122
BsrFI RCCGGY 1 cut(s) 216
BsrI ACTGG 1 cut(s) 485
BssAI RCCGGY 1 cut(s) 216
BssECI CCNNGG 4 cut(s) 695, 1101, 1185, 1215
BssMI GATC 7 cut(s) 202, 208, 268, 548, 728, 901, 1180
BssT1I CCWWGG 2 cut(s) 1185, 1215
Bst2UI CCWGG 2 cut(s) 696, 1102
Bst4CI ACNGT 2 cut(s) 661, 679
Bst6I CTCTTC 2 cut(s) 71, 186
BstAPI GCANNNNNTGC 1 cut(s) 1124
BstBI TTCGAA 2 cut(s) 145, 467
BstC8I GCNNGC 2 cut(s) 863, 1200
BstDEI CTNAG 2 cut(s) 162, 1296
BstF5I GGATG 3 cut(s) 238, 706, 1240
BstFNI CGCG 3 cut(s) 223, 225, 829
BstHHI GCGC 1 cut(s) 225
BstKTI GATC 7 cut(s) 205, 211, 271, 551, 731, 904, 1183
BstMAI GTCTC 2 cut(s) 68, 1062
BstMBI GATC 7 cut(s) 202, 208, 268, 548, 728, 901, 1180
BstMCI CGRYCG 2 cut(s) 221, 271
BstMWI GCNNNNNNNGC 5 cut(s) 260, 339, 426, 1124, 1256
BstNI CCWGG 2 cut(s) 696, 1102
BstNSI RCATGY 3 cut(s) 1041, 1100, 1177
BstSCI CCNGG 2 cut(s) 694, 1100
BstSFI CTRYAG 3 cut(s) 294, 432, 678
BstSLI GKGCMC 1 cut(s) 61
BstUI CGCG 3 cut(s) 223, 225, 829
BstV1I GCAGC 4 cut(s) 605, 853, 1006, 1021
BstX2I RGATCY 1 cut(s) 728
BstXI CCANNNNNNTGG 1 cut(s) 1222
BstYI RGATCY 1 cut(s) 728
BstZI CGGCCG 1 cut(s) 218
BsuRI GGCC 4 cut(s) 220, 514, 1113, 1259
BtgZI GCGATG 1 cut(s) 18
BtsCI GGATG 3 cut(s) 238, 706, 1240
BtsI GCAGTG 1 cut(s) 732
BtsIMutI CAGTG 3 cut(s) 492, 657, 732
BveI ACCTGC 1 cut(s) 862
Cac8I GCNNGC 2 cut(s) 863, 1200
CciI TCATGA 1 cut(s) 505
CfoI GCGC 1 cut(s) 225
Cfr10I RCCGGY 1 cut(s) 216
Cfr13I GGNCC 3 cut(s) 214, 227, 1112
CpoI CGGWCCG 1 cut(s) 227
Csp6I GTAC 2 cut(s) 744, 1094
CspI CGGWCCG 1 cut(s) 227
CviAII CATG 6 cut(s) 506, 998, 1038, 1097, 1174, 1255
CviQI GTAC 2 cut(s) 744, 1094
DdeI CTNAG 2 cut(s) 162, 1296
DpnI GATC 7 cut(s) 204, 210, 270, 550, 730, 903, 1182
DpnII GATC 7 cut(s) 202, 208, 268, 548, 728, 901, 1180
EaeI YGGCCR 1 cut(s) 218
EagI CGGCCG 1 cut(s) 218
Eam1104I CTCTTC 2 cut(s) 71, 186
EarI CTCTTC 2 cut(s) 71, 186
EciI GGCGGA 4 cut(s) 278, 348, 396, 402
Ecl136II GAGCTC 1 cut(s) 781
EclXI CGGCCG 1 cut(s) 218
Eco130I CCWWGG 2 cut(s) 1185, 1215
Eco24I GRGCYC 1 cut(s) 783
Eco31I GGTCTC 1 cut(s) 1062
Eco32I GATATC 1 cut(s) 495
Eco47I GGWCC 2 cut(s) 214, 227
Eco52I CGGCCG 1 cut(s) 218
Eco53kI GAGCTC 1 cut(s) 781
Eco57I CTGAAG 1 cut(s) 603
Eco88I CYCGRG 1 cut(s) 1289
EcoICRI GAGCTC 1 cut(s) 781
EcoO109I RGGNCCY 1 cut(s) 1112
EcoRI GAATTC 2 cut(s) 439, 683
EcoRII CCWGG 2 cut(s) 694, 1100
EcoRV GATATC 1 cut(s) 495
EcoT14I CCWWGG 2 cut(s) 1185, 1215
EcoT22I ATGCAT 1 cut(s) 791
EcoT38I GRGCYC 1 cut(s) 783
ErhI CCWWGG 2 cut(s) 1185, 1215
Esp3I CGTCTC 1 cut(s) 68
FaeI CATG 6 cut(s) 509, 1001, 1041, 1100, 1177, 1258
FatI CATG 6 cut(s) 505, 997, 1037, 1096, 1173, 1254
FauI CCCGC 2 cut(s) 298, 335
Fnu4HI GCNGC 8 cut(s) 221, 252, 418, 421, 594, 842, 1020, 1035
FokI GGATG 3 cut(s) 225, 713, 1247
FriOI GRGCYC 1 cut(s) 783
Fsp4HI GCNGC 8 cut(s) 221, 252, 418, 421, 594, 842, 1020, 1035
FspBI CTAG 2 cut(s) 375, 935
GlaI GCGC 1 cut(s) 224
GluI GCNGC 8 cut(s) 221, 252, 418, 421, 594, 842, 1020, 1035
GsuI CTGGAG 1 cut(s) 563
HaeIII GGCC 4 cut(s) 220, 514, 1113, 1259
HapII CCGG 6 cut(s) 70, 217, 230, 242, 274, 404
HhaI GCGC 1 cut(s) 225
Hin1II CATG 6 cut(s) 509, 1001, 1041, 1100, 1177, 1258
Hin6I GCGC 1 cut(s) 223
HinP1I GCGC 1 cut(s) 223
HpaII CCGG 6 cut(s) 70, 217, 230, 242, 274, 404
HphI GGTGA 5 cut(s) 268, 418, 489, 968, 1201
Hpy188I TCNGA 9 cut(s) 107, 133, 165, 202, 286, 630, 712, 1044, 1297
Hpy188III TCNNGA 9 cut(s) 70, 206, 212, 230, 242, 444, 506, 767, 1353
HpyAV CCTTC 3 cut(s) 1087, 1186, 1270
HpyCH4III ACNGT 2 cut(s) 661, 679
HpyCH4IV ACGT 1 cut(s) 55
HpyF10VI GCNNNNNNNGC 5 cut(s) 260, 339, 426, 1124, 1256
HpyF3I CTNAG 2 cut(s) 162, 1296
HpySE526I ACGT 1 cut(s) 55
Hsp92II CATG 6 cut(s) 509, 1001, 1041, 1100, 1177, 1258
HspAI GCGC 1 cut(s) 223
Kpn2I TCCGGA 3 cut(s) 69, 229, 241
Kzo9I GATC 7 cut(s) 202, 208, 268, 548, 728, 901, 1180
LguI GCTCTTC 1 cut(s) 186
LmnI GCTCC 4 cut(s) 406, 786, 1195, 1247
Lsp1109I GCAGC 4 cut(s) 605, 853, 1006, 1021
LweI GCATC 5 cut(s) 760, 917, 1003, 1150, 1279
MaeI CTAG 2 cut(s) 375, 935
MaeII ACGT 1 cut(s) 55
MaeIII GTNAC 3 cut(s) 394, 956, 1240
MalI GATC 7 cut(s) 204, 210, 270, 550, 730, 903, 1182
MboI GATC 7 cut(s) 202, 208, 268, 548, 728, 901, 1180
MboII GAAGA 7 cut(s) 58, 92, 173, 176, 179, 182, 1265
MfeI CAATTG 2 cut(s) 855, 1050
MflI RGATCY 1 cut(s) 728
MhlI GDGCHC 3 cut(s) 61, 566, 783
MluI ACGCGT 1 cut(s) 827
MlyI GAGTC 3 cut(s) 496, 1301, 1319
MmeI TCCRAC 4 cut(s) 339, 706, 802, 1067
Mph1103I ATGCAT 1 cut(s) 791
MroI TCCGGA 3 cut(s) 69, 229, 241
MseI TTAA 4 cut(s) 635, 644, 948, 1266
MslI CAYNNNNRTG 1 cut(s) 1002
MspI CCGG 6 cut(s) 70, 217, 230, 242, 274, 404
MspR9I CCNGG 2 cut(s) 696, 1102
MunI CAATTG 2 cut(s) 855, 1050
MvaI CCWGG 2 cut(s) 696, 1102
MvnI CGCG 3 cut(s) 223, 225, 829
MwoI GCNNNNNNNGC 5 cut(s) 260, 339, 426, 1124, 1256
NdeII GATC 7 cut(s) 202, 208, 268, 548, 728, 901, 1180
NlaIII CATG 6 cut(s) 509, 1001, 1041, 1100, 1177, 1258
NlaIV GGNNCC 1 cut(s) 730
NmuCI GTSAC 2 cut(s) 956, 1240
NsiI ATGCAT 1 cut(s) 791
NspI RCATGY 3 cut(s) 1041, 1100, 1177
NspV TTCGAA 2 cut(s) 145, 467
PagI TCATGA 1 cut(s) 505
PciSI GCTCTTC 1 cut(s) 186
PfeI GAWTC 7 cut(s) 77, 108, 134, 147, 166, 707, 713
PkrI GCNGC 8 cut(s) 222, 253, 419, 422, 595, 843, 1021, 1036
Ple19I CGATCG 1 cut(s) 271
PleI GAGTC 3 cut(s) 496, 1300, 1318
PpsI GAGTC 3 cut(s) 496, 1300, 1318
Psp124BI GAGCTC 1 cut(s) 783
Psp6I CCWGG 2 cut(s) 694, 1100
PspGI CCWGG 2 cut(s) 694, 1100
PspN4I GGNNCC 1 cut(s) 730
PspPI GGNCC 3 cut(s) 214, 227, 1112
PsuI RGATCY 1 cut(s) 728
PvuI CGATCG 1 cut(s) 271
RsaI GTAC 2 cut(s) 745, 1095
RsaNI GTAC 2 cut(s) 744, 1094
RseI CAYNNNNRTG 1 cut(s) 1002
Rsr2I CGGWCCG 1 cut(s) 227
RsrII CGGWCCG 1 cut(s) 227
SacI GAGCTC 1 cut(s) 783
SapI GCTCTTC 1 cut(s) 186
SaqAI TTAA 4 cut(s) 635, 644, 948, 1266
SatI GCNGC 8 cut(s) 221, 252, 418, 421, 594, 842, 1020, 1035
Sau3AI GATC 7 cut(s) 202, 208, 268, 548, 728, 901, 1180
Sau96I GGNCC 3 cut(s) 214, 227, 1112
SchI GAGTC 3 cut(s) 496, 1301, 1319
ScrFI CCNGG 2 cut(s) 696, 1102
SduI GDGCHC 3 cut(s) 61, 566, 783
SfaNI GCATC 5 cut(s) 760, 917, 1003, 1150, 1279
SfcI CTRYAG 3 cut(s) 294, 432, 678
SfuI TTCGAA 2 cut(s) 145, 467
SinI GGWCC 2 cut(s) 214, 227
SmiMI CAYNNNNRTG 1 cut(s) 1002
SpeI ACTAGT 1 cut(s) 934
SspMI CTAG 2 cut(s) 375, 935
SstI GAGCTC 1 cut(s) 783
StyD4I CCNGG 2 cut(s) 694, 1100
StyI CCWWGG 2 cut(s) 1185, 1215
TaaI ACNGT 2 cut(s) 661, 679
TaiI ACGT 1 cut(s) 58
TaqI TCGA 5 cut(s) 51, 145, 467, 687, 1316
TatI WGTACW 1 cut(s) 1093
TauI GCSGC 4 cut(s) 223, 254, 420, 423
TfiI GAWTC 7 cut(s) 77, 108, 134, 147, 166, 707, 713
Tru1I TTAA 4 cut(s) 635, 644, 948, 1266
Tru9I TTAA 4 cut(s) 635, 644, 948, 1266
TscAI CASTG 3 cut(s) 492, 664, 739
TseFI GTSAC 2 cut(s) 956, 1240
TseI GCWGC 4 cut(s) 593, 841, 1019, 1034
Tsp45I GTSAC 2 cut(s) 956, 1240
TspDTI ATGAA 3 cut(s) 17, 522, 933
TspGWI ACGGA 3 cut(s) 381, 572, 687
TspRI CASTG 3 cut(s) 492, 664, 739
VpaK11BI GGWCC 2 cut(s) 214, 227
XapI RAATTY 2 cut(s) 439, 683
XceI RCATGY 3 cut(s) 1041, 1100, 1177
XcmI CCANNNNNNNNNTGG 1 cut(s) 939
XspI CTAG 2 cut(s) 375, 935
Zsp2I ATGCAT 1 cut(s) 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.