Rh6BG284600

Sterol 3-beta-glucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0001484
Physical Location & Seq
Forward (+)
50842899 .. 50850025
7127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG284600.1

Sequence Viewer

Length: 1290 bp
ATGGCGGAGGATCGCCGGAGTAGTTCCGAGAGTTCTGTAGAAGTTCCGGGGAGAATTGAGCAGAAAAGTGACGGCGGAAGTGGCGGGAAAAGAGTAGAGTTGGAGAACGGCGAGGCTAGTGGCGGAGGCGGAGGCGTTACTGCTCCGGTGAATAACGGCGGCGGCAGTAGCTCTACAGGGAATTCAGGAAGTTCTGGCTTTAGCTTTTCGAAAACGAACGCATTGCCAGTGGAGATATCACCGACTCATGAAAGGCCAGAACCACATTCAGTTCCAGCAAAGTTGGAGAGATCAAAAACGGAGAGCACCAGACCTAATGTATTGTCCAAAGAGGCAGCAAAGATTTTTGACGACAAAACTTCAGTCCATCAGAAGTTAAAGCTGTTAAATAGAATAGCCACTGTGAAAGATGACGGAACTGTAGAATTCGATGTTCCAGGGGATGTTGAATCTGAATCTTTTGGTGTTGGATCCACTGCTGGTTGTACCGATGTTGCTGATGAGCCTCTTGATGCAACAGAGCTCCAATGCATACCACCAATGCAAATTGTAATGCTTATTGTTGGAACGCGTGGAGATGTGCAGCCGTTTATTGCAATTGGCAAGCGTTTGCAGCTATCGTATCAAATTGTTGACTCCTTAATATGGCTTGGAATACGGGACATGATTAATGATGTTCGGAAGAAAAAATTGAGATTACGACCTGTCACATATTTAAGTGGTTCACAAGGCTCTGAGTCTGATGTCCCACATGGATATATATGGAGTCCTCATCTTGTTCCCAAACCAAAAGATTGGGGACCTAAGGTTGATGTGGTGGGATTTTGCTTCCTTGATCTTGCATCAAATTATGAACCTCCACAACCACTAGTGGAATGGCTTAAAGCTGGTGACAAGCCTATATACATTGGGTTTGGTAGCCTTGTGCATCATGGAGGTGCTGGAACAACGGCTGCTGGTCTAAAAGCTGCATGTCCGACAACAATTGTTCCTTTCTTTGGAGACCAACCCTTCTGGGGAGAGCGAGTACATGCCAGGGGAGTAGGCCCTGCACCCATTGCAGTTGATGAGTTCTCACTTCCCAAATTGGTTGATGCTATAAATTACATGCTTGATCCCAAGGTGAAGGAGCGTGCTATTCAACTTGCCAAGGATATGGAGAATGAGGATGGTGTGACAGGAGCAGTCATGGCCTTCTTTAAGCATCTTCCTCGCAAAAAGCCCGAGTCTGAGCCAGAAACAGAGTCATCGAGCCTTTGCTCTATAAGTAGATGTTTTGGTTGTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_28 UDPGT

Protein Analysis

429

Amino Acids

45.95

Weight (kDa)

5.6

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_28 PF03033 183 - 225 8.8e-06 Glycosyltransferase family 28 N-terminal domain
EryCIII-like_C PF06722 307 - 388 1.7e-08 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 571
AciI CCGC 7 cut(s) 5, 75, 84, 123, 129, 159, 162
AclWI GGATC 4 cut(s) 18, 465, 478, 1109
AcsI RAATTY 2 cut(s) 181, 425
AcuI CTGAAG 1 cut(s) 345
AfaI GTAC 2 cut(s) 487, 1029
AfiI CCNNNNNNNGG 3 cut(s) 645, 998, 1016
AflIII ACRYGT 1 cut(s) 569
AgsI TTSAA 2 cut(s) 449, 1142
AhlI ACTAGT 1 cut(s) 868
AjnI CCWGG 2 cut(s) 436, 1034
AluBI AGCT 7 cut(s) 171, 204, 382, 523, 616, 887, 968
AluI AGCT 7 cut(s) 171, 204, 382, 523, 616, 887, 968
Alw21I GWGCWC 2 cut(s) 308, 525
Alw26I GTCTC 1 cut(s) 996
AlwI GGATC 4 cut(s) 18, 465, 478, 1109
Ama87I CYCGRG 1 cut(s) 1223
AoxI GGCC 3 cut(s) 254, 1045, 1191
ApeKI GCWGC 5 cut(s) 335, 583, 613, 953, 968
ApoI RAATTY 2 cut(s) 181, 425
ArsI GACNNNNNNTTYG 2 cut(s) 348, 380
AseI ATTAAT 1 cut(s) 669
AspS9I GGNCC 2 cut(s) 800, 1046
AsuC2I CCSGG 1 cut(s) 48
AsuHPI GGTGA 4 cut(s) 160, 231, 902, 1135
AsuII TTCGAA 1 cut(s) 209
AvaI CYCGRG 1 cut(s) 1223
AvaII GGWCC 1 cut(s) 800
AxyI CCTNAGG 1 cut(s) 804
BamHI GGATCC 1 cut(s) 470
BanII GRGCYC 1 cut(s) 525
Bbv12I GWGCWC 2 cut(s) 308, 525
BbvI GCAGC 5 cut(s) 347, 595, 625, 940, 955
BccI CCATC 2 cut(s) 375, 1163
BceAI ACGGC 5 cut(s) 88, 124, 172, 571, 966
BcgI CGANNNNNNTGC 4 cut(s) 205, 239, 1193, 1227
BciT130I CCWGG 2 cut(s) 438, 1036
BcnI CCSGG 1 cut(s) 48
BcoDI GTCTC 1 cut(s) 996
BcuI ACTAGT 1 cut(s) 868
BfaI CTAG 2 cut(s) 117, 869
BfmI CTRYAG 3 cut(s) 36, 174, 420
BisI GCNGC 7 cut(s) 160, 163, 336, 584, 614, 954, 969
BlsI GCNGC 7 cut(s) 161, 164, 337, 585, 615, 955, 970
Bme1390I CCNGG 3 cut(s) 48, 438, 1036
Bme18I GGWCC 1 cut(s) 800
BmeT110I CYCGRG 1 cut(s) 1223
BmgT120I GGNCC 2 cut(s) 800, 1046
BmiI GGNNCC 2 cut(s) 472, 801
BmrFI CCNGG 3 cut(s) 48, 438, 1036
BmsI GCATC 5 cut(s) 502, 851, 937, 1084, 1213
Bpu14I TTCGAA 1 cut(s) 209
BpuMI CCSGG 1 cut(s) 48
BsaI GGTCTC 1 cut(s) 996
BsaJI CCNNGG 5 cut(s) 47, 437, 1035, 1119, 1149
BsaWI WCCGGW 1 cut(s) 145
BsaXI ACNNNNNCTCC 2 cut(s) 1011, 1041
Bsc4I CCNNNNNNNGG 3 cut(s) 645, 998, 1016
Bse1I ACTGG 1 cut(s) 227
Bse21I CCTNAGG 1 cut(s) 804
Bse3DI GCAATG 2 cut(s) 221, 1056
BseBI CCWGG 2 cut(s) 438, 1036
BseDI CCNNGG 5 cut(s) 47, 437, 1035, 1119, 1149
BseGI GGATG 2 cut(s) 448, 1174
BseLI CCNNNNNNNGG 3 cut(s) 645, 998, 1016
BseMI GCAATG 2 cut(s) 221, 1056
BseMII CTCAG 2 cut(s) 726, 1221
BseNI ACTGG 1 cut(s) 227
BseXI GCAGC 5 cut(s) 347, 595, 625, 940, 955
BsgI GTGCAG 2 cut(s) 602, 1035
Bsh1236I CGCG 1 cut(s) 571
BshFI GGCC 3 cut(s) 256, 1047, 1193
BsiHKAI GWGCWC 2 cut(s) 308, 525
BsiHKCI CYCGRG 1 cut(s) 1223
BsiSI CCGG 3 cut(s) 16, 47, 146
BslFI GGGAC 3 cut(s) 674, 731, 813
BslI CCNNNNNNNGG 3 cut(s) 645, 998, 1016
BsmAI GTCTC 1 cut(s) 996
BsmFI GGGAC 3 cut(s) 674, 731, 813
BsnI GGCC 3 cut(s) 256, 1047, 1193
Bso31I GGTCTC 1 cut(s) 996
BsoBI CYCGRG 1 cut(s) 1223
Bsp119I TTCGAA 1 cut(s) 209
Bsp1286I GDGCHC 2 cut(s) 308, 525
Bsp143I GATC 5 cut(s) 10, 290, 470, 835, 1114
BspACI CCGC 7 cut(s) 5, 75, 84, 123, 129, 159, 162
BspANI GGCC 3 cut(s) 256, 1047, 1193
BspCNI CTCAG 2 cut(s) 727, 1222
BspFNI CGCG 1 cut(s) 571
BspHI TCATGA 1 cut(s) 247
BspLI GGNNCC 2 cut(s) 472, 801
BspPI GGATC 4 cut(s) 18, 465, 478, 1109
BspT104I TTCGAA 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 996
BsrDI GCAATG 2 cut(s) 221, 1056
BsrI ACTGG 1 cut(s) 227
BssECI CCNNGG 5 cut(s) 47, 437, 1035, 1119, 1149
BssMI GATC 5 cut(s) 10, 290, 470, 835, 1114
BssT1I CCWWGG 2 cut(s) 1119, 1149
Bst2UI CCWGG 2 cut(s) 438, 1036
Bst4CI ACNGT 2 cut(s) 403, 421
BstAPI GCANNNNNTGC 1 cut(s) 1058
BstBI TTCGAA 1 cut(s) 209
BstC8I GCNNGC 2 cut(s) 605, 1134
BstDEI CTNAG 3 cut(s) 735, 804, 1230
BstF5I GGATG 2 cut(s) 448, 1174
BstFNI CGCG 1 cut(s) 571
BstKTI GATC 5 cut(s) 13, 293, 473, 838, 1117
BstMAI GTCTC 1 cut(s) 996
BstMBI GATC 5 cut(s) 10, 290, 470, 835, 1114
BstMWI GCNNNNNNNGC 5 cut(s) 81, 168, 613, 1058, 1190
BstNI CCWGG 2 cut(s) 438, 1036
BstNSI RCATGY 3 cut(s) 975, 1034, 1111
BstSCI CCNGG 3 cut(s) 46, 436, 1034
BstSFI CTRYAG 3 cut(s) 36, 174, 420
BstUI CGCG 1 cut(s) 571
BstV1I GCAGC 5 cut(s) 347, 595, 625, 940, 955
BstX2I RGATCY 1 cut(s) 470
BstXI CCANNNNNNTGG 2 cut(s) 795, 1156
BstYI RGATCY 1 cut(s) 470
Bsu36I CCTNAGG 1 cut(s) 804
BsuRI GGCC 3 cut(s) 256, 1047, 1193
BtsCI GGATG 2 cut(s) 448, 1174
BtsI GCAGTG 1 cut(s) 474
BtsIMutI CAGTG 3 cut(s) 234, 399, 474
Cac8I GCNNGC 2 cut(s) 605, 1134
CciI TCATGA 1 cut(s) 247
Cfr13I GGNCC 2 cut(s) 800, 1046
Csp6I GTAC 2 cut(s) 486, 1028
CviAII CATG 8 cut(s) 248, 664, 752, 932, 972, 1031, 1108, 1189
CviQI GTAC 2 cut(s) 486, 1028
DdeI CTNAG 3 cut(s) 735, 804, 1230
DpnI GATC 5 cut(s) 12, 292, 472, 837, 1116
DpnII GATC 5 cut(s) 10, 290, 470, 835, 1114
EciI GGCGGA 4 cut(s) 20, 90, 138, 144
Ecl136II GAGCTC 1 cut(s) 523
Eco130I CCWWGG 2 cut(s) 1119, 1149
Eco24I GRGCYC 1 cut(s) 525
Eco31I GGTCTC 1 cut(s) 996
Eco32I GATATC 1 cut(s) 237
Eco47I GGWCC 1 cut(s) 800
Eco53kI GAGCTC 1 cut(s) 523
Eco57I CTGAAG 1 cut(s) 345
Eco81I CCTNAGG 1 cut(s) 804
Eco88I CYCGRG 1 cut(s) 1223
EcoICRI GAGCTC 1 cut(s) 523
EcoO109I RGGNCCY 2 cut(s) 800, 1046
EcoRI GAATTC 2 cut(s) 181, 425
EcoRII CCWGG 2 cut(s) 436, 1034
EcoRV GATATC 1 cut(s) 237
EcoT14I CCWWGG 2 cut(s) 1119, 1149
EcoT22I ATGCAT 1 cut(s) 533
EcoT38I GRGCYC 1 cut(s) 525
ErhI CCWWGG 2 cut(s) 1119, 1149
FaeI CATG 8 cut(s) 251, 667, 755, 935, 975, 1034, 1111, 1192
FaqI GGGAC 3 cut(s) 674, 731, 813
FatI CATG 8 cut(s) 247, 663, 751, 931, 971, 1030, 1107, 1188
FauI CCCGC 1 cut(s) 77
Fnu4HI GCNGC 7 cut(s) 160, 163, 336, 584, 614, 954, 969
FokI GGATG 2 cut(s) 455, 1181
FriOI GRGCYC 1 cut(s) 525
Fsp4HI GCNGC 7 cut(s) 160, 163, 336, 584, 614, 954, 969
FspBI CTAG 2 cut(s) 117, 869
GluI GCNGC 7 cut(s) 160, 163, 336, 584, 614, 954, 969
HaeIII GGCC 3 cut(s) 256, 1047, 1193
HapII CCGG 3 cut(s) 16, 47, 146
Hin1II CATG 8 cut(s) 251, 667, 755, 935, 975, 1034, 1111, 1192
HincII GTYRAC 1 cut(s) 634
HindII GTYRAC 1 cut(s) 634
HinfI GANTC 8 cut(s) 244, 449, 455, 635, 737, 766, 1226, 1244
HpaII CCGG 3 cut(s) 16, 47, 146
HphI GGTGA 4 cut(s) 160, 231, 902, 1135
Hpy166II GTNNAC 2 cut(s) 634, 725
Hpy188I TCNGA 8 cut(s) 28, 372, 454, 681, 736, 742, 978, 1231
Hpy188III TCNNGA 4 cut(s) 186, 248, 509, 1287
Hpy8I GTNNAC 2 cut(s) 634, 725
HpyAV CCTTC 3 cut(s) 1021, 1120, 1204
HpyCH4III ACNGT 2 cut(s) 403, 421
HpyF10VI GCNNNNNNNGC 5 cut(s) 81, 168, 613, 1058, 1190
HpyF3I CTNAG 3 cut(s) 735, 804, 1230
Hsp92II CATG 8 cut(s) 251, 667, 755, 935, 975, 1034, 1111, 1192
Kzo9I GATC 5 cut(s) 10, 290, 470, 835, 1114
LmnI GCTCC 4 cut(s) 148, 528, 1129, 1181
Lsp1109I GCAGC 5 cut(s) 347, 595, 625, 940, 955
LweI GCATC 5 cut(s) 502, 851, 937, 1084, 1213
MaeI CTAG 2 cut(s) 117, 869
MaeIII GTNAC 5 cut(s) 68, 136, 706, 890, 1174
MalI GATC 5 cut(s) 12, 292, 472, 837, 1116
MboI GATC 5 cut(s) 10, 290, 470, 835, 1114
MboII GAAGA 2 cut(s) 694, 1199
MfeI CAATTG 2 cut(s) 597, 984
MflI RGATCY 1 cut(s) 470
MhlI GDGCHC 2 cut(s) 308, 525
MluI ACGCGT 1 cut(s) 569
MlyI GAGTC 6 cut(s) 238, 629, 746, 775, 1235, 1253
MmeI TCCRAC 5 cut(s) 81, 264, 448, 544, 1001
Mph1103I ATGCAT 1 cut(s) 533
MseI TTAA 7 cut(s) 377, 386, 641, 669, 716, 882, 1200
MslI CAYNNNNRTG 1 cut(s) 936
MspI CCGG 3 cut(s) 16, 47, 146
MspR9I CCNGG 3 cut(s) 48, 438, 1036
MunI CAATTG 2 cut(s) 597, 984
MvaI CCWGG 2 cut(s) 438, 1036
MvnI CGCG 1 cut(s) 571
MwoI GCNNNNNNNGC 5 cut(s) 81, 168, 613, 1058, 1190
NciI CCSGG 1 cut(s) 48
NdeII GATC 5 cut(s) 10, 290, 470, 835, 1114
NlaIII CATG 8 cut(s) 251, 667, 755, 935, 975, 1034, 1111, 1192
NlaIV GGNNCC 2 cut(s) 472, 801
NmuCI GTSAC 4 cut(s) 68, 706, 890, 1174
NsiI ATGCAT 1 cut(s) 533
NspI RCATGY 3 cut(s) 975, 1034, 1111
NspV TTCGAA 1 cut(s) 209
PagI TCATGA 1 cut(s) 247
PfeI GAWTC 2 cut(s) 449, 455
PkrI GCNGC 7 cut(s) 161, 164, 337, 585, 615, 955, 970
PleI GAGTC 6 cut(s) 238, 629, 745, 774, 1234, 1252
PpsI GAGTC 6 cut(s) 238, 629, 745, 774, 1234, 1252
PpuMI RGGWCCY 1 cut(s) 800
PshBI ATTAAT 1 cut(s) 669
Psp124BI GAGCTC 1 cut(s) 525
Psp5II RGGWCCY 1 cut(s) 800
Psp6I CCWGG 2 cut(s) 436, 1034
PspGI CCWGG 2 cut(s) 436, 1034
PspN4I GGNNCC 2 cut(s) 472, 801
PspPI GGNCC 2 cut(s) 800, 1046
PspPPI RGGWCCY 1 cut(s) 800
PsuI RGATCY 1 cut(s) 470
RsaI GTAC 2 cut(s) 487, 1029
RsaNI GTAC 2 cut(s) 486, 1028
RseI CAYNNNNRTG 1 cut(s) 936
SacI GAGCTC 1 cut(s) 525
SaqAI TTAA 7 cut(s) 377, 386, 641, 669, 716, 882, 1200
SatI GCNGC 7 cut(s) 160, 163, 336, 584, 614, 954, 969
Sau3AI GATC 5 cut(s) 10, 290, 470, 835, 1114
Sau96I GGNCC 2 cut(s) 800, 1046
SchI GAGTC 6 cut(s) 238, 629, 746, 775, 1235, 1253
ScrFI CCNGG 3 cut(s) 48, 438, 1036
SduI GDGCHC 2 cut(s) 308, 525
SfaNI GCATC 5 cut(s) 502, 851, 937, 1084, 1213
SfcI CTRYAG 3 cut(s) 36, 174, 420
SfuI TTCGAA 1 cut(s) 209
SinI GGWCC 1 cut(s) 800
SmiMI CAYNNNNRTG 1 cut(s) 936
SpeI ACTAGT 1 cut(s) 868
SsiI CCGC 7 cut(s) 5, 75, 84, 123, 129, 159, 162
SspMI CTAG 2 cut(s) 117, 869
SstI GAGCTC 1 cut(s) 525
StyD4I CCNGG 3 cut(s) 46, 436, 1034
StyI CCWWGG 2 cut(s) 1119, 1149
TaaI ACNGT 2 cut(s) 403, 421
TaqI TCGA 3 cut(s) 209, 429, 1250
TatI WGTACW 1 cut(s) 1027
TauI GCSGC 2 cut(s) 162, 165
TfiI GAWTC 2 cut(s) 449, 455
Tru1I TTAA 7 cut(s) 377, 386, 641, 669, 716, 882, 1200
Tru9I TTAA 7 cut(s) 377, 386, 641, 669, 716, 882, 1200
TscAI CASTG 3 cut(s) 234, 406, 481
TseFI GTSAC 4 cut(s) 68, 706, 890, 1174
TseI GCWGC 5 cut(s) 335, 583, 613, 953, 968
Tsp45I GTSAC 4 cut(s) 68, 706, 890, 1174
TspDTI ATGAA 2 cut(s) 264, 867
TspGWI ACGGA 2 cut(s) 314, 429
TspRI CASTG 3 cut(s) 234, 406, 481
VpaK11BI GGWCC 1 cut(s) 800
VspI ATTAAT 1 cut(s) 669
XapI RAATTY 2 cut(s) 181, 425
XceI RCATGY 3 cut(s) 975, 1034, 1111
XcmI CCANNNNNNNNNTGG 1 cut(s) 873
XspI CTAG 2 cut(s) 117, 869
Zsp2I ATGCAT 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.