Rh3AG011700

Sterol 3-beta-glucosyltransferase UGT80A2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0001484
Physical Location & Seq
Reverse (-)
696766 .. 703903
7138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG011700.1

Sequence Viewer

Length: 1203 bp
ATGGCCACCGAGCATTCCGCCGACCACCGCCGTGCCGATTCCGGCAGCTCCGACACTTCCGTCTATTACGACGCACACCTCGACGCTAGCGACGCCAATGGCAGCAGCAGCTCCTCTTCAGGGTTTACAGAGAGCCATGTGCCAATAGAAGCCTCCGGAGAATTATCGAATGCCGGAAACGGTTCCGGAAACTATACCGGAACCTCATCGGGTTCGAGTTCCGGTCAGCTTGATACAGGCCCGAAATTGAATCAGAGTCAGTCATTAGCTGTATATCTAACCAGACTCTTCGACGAAAAAATCCCTTTCAGAAAAAAGCTTAAGCATATAAAACGAGTGGCAACAGTTACGGATAACGGGACTGTGCAATTCGACGTTCCGGGAGATGTTAAACCGCATTTACTGGATTTTGGAACCGGAGTTGTTTATGATGAAGAGAGTTCCGGTGCATCGGAAAATGTGCCTGATATACCTCCACTGCAAATTGTAATGCTGATTGTTGGTACGCGAGGAGATGTTCAGCCATTTGTTGCTATTGGAAAAAAATTGCAGGAATATGGCCACAGGGTTAGGCTAGCAACTCATGCAAATTTCAAAGATTTTGTCCTTACTGCTGGGTTGGAGTTCTTTCCTTTAGGTGGAGATCCGAAAGTTCTTGCTGAATGCCTACCAGTGAATTCCCTCATCCTCTATCCCGTGTCAAGCAACATATTGGATATAGAGTACTGTTATGAGCACCAAAGAGTCAAAGTCAAGAGGATCCGAGTTCTTGCTTCAACATCTCTTGAGCAAATATCAGGTTTCTCACTGGATATATGGAATTCTTTCCAGGTACATCATGGAGGTGCTGGGACAACTGCTGCCGGTTTGAAAGCTGCGTGTCCAACTACGATTGTGCCATTCTTTGGAGACCAGCCATTTTGGGGTGAGAGGGTGCATGCGAGAGGAGTAGGTCCTGCACCAATCCCAGCTGATGAGTTCTCACTTGAAAAATTGGTTGATGCCATACGGTTCATGTTAGATCCAAAGGTTAAAGCGCGCGCTGTTGAAATTGCCAAAGCAATGGAGAATGAAGATGGGGTCGCCGGAGCTGTGAAGGCCTTTCATAAGCACTTTCCTCGCAATAAAGCTCAATATGAGTCATTGCCGGCTCGAAAAGGGCATTTTTCTATCAGGCGGTGTTTTGGCTACTCCTATTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_28 UDPGT

Protein Analysis

400

Amino Acids

43.31

Weight (kDa)

6.43

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_28 PF03033 162 - 215 1.5e-15 Glycosyltransferase family 28 N-terminal domain
EryCIII-like_C PF06722 278 - 356 3.4e-08 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 59
AccB7I CCANNNNNTGG 1 cut(s) 905
AccII CGCG 3 cut(s) 508, 1039, 1041
AccIII TCCGGA 2 cut(s) 155, 185
AciI CCGC 4 cut(s) 18, 28, 395, 1177
AclWI GGATC 4 cut(s) 638, 754, 767, 1016
AcoI YGGCCR 2 cut(s) 3, 559
AcsI RAATTY 3 cut(s) 589, 676, 820
AcuI CTGAAG 1 cut(s) 102
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 3 cut(s) 505, 725, 834
AfiI CCNNNNNNNGG 4 cut(s) 120, 638, 905, 923
AflII CTTAAG 1 cut(s) 320
AgsI TTSAA 6 cut(s) 250, 595, 777, 871, 989, 1049
AjnI CCWGG 1 cut(s) 828
AleI CACNNNNGTG 1 cut(s) 30
AluBI AGCT 9 cut(s) 48, 111, 229, 269, 319, 875, 971, 1091, 1130
AluI AGCT 9 cut(s) 48, 111, 229, 269, 319, 875, 971, 1091, 1130
Alw21I GWGCWC 1 cut(s) 738
Alw26I GTCTC 1 cut(s) 903
AlwI GGATC 4 cut(s) 638, 754, 767, 1016
Aor13HI TCCGGA 2 cut(s) 155, 185
AoxI GGCC 4 cut(s) 3, 238, 559, 1098
ApeKI GCWGC 6 cut(s) 45, 102, 105, 108, 860, 875
ApoI RAATTY 3 cut(s) 589, 676, 820
ArsI GACNNNNNNTTYG 2 cut(s) 588, 620
Asp700I GAANNNNTTC 2 cut(s) 181, 824
AspLEI GCGC 3 cut(s) 1039, 1041, 1043
AspS9I GGNCC 2 cut(s) 239, 953
AsuC2I CCSGG 1 cut(s) 381
AsuHPI GGTGA 1 cut(s) 938
AsuNHI GCTAGC 2 cut(s) 86, 574
AvaII GGWCC 1 cut(s) 953
BalI TGGCCA 2 cut(s) 5, 561
BamHI GGATCC 1 cut(s) 759
Bbv12I GWGCWC 1 cut(s) 738
BbvI GCAGC 6 cut(s) 57, 114, 117, 120, 847, 862
BccI CCATC 1 cut(s) 1070
BceAI ACGGC 1 cut(s) 15
BcgI CGANNNNNNTGC 2 cut(s) 1100, 1134
BciT130I CCWGG 1 cut(s) 830
BcnI CCSGG 1 cut(s) 381
BcoDI GTCTC 1 cut(s) 903
BfaI CTAG 2 cut(s) 87, 575
BfrI CTTAAG 1 cut(s) 320
BisI GCNGC 6 cut(s) 46, 103, 106, 109, 861, 876
BlsI GCNGC 6 cut(s) 47, 104, 107, 110, 862, 877
BmcAI AGTACT 1 cut(s) 725
Bme1390I CCNGG 2 cut(s) 381, 830
Bme18I GGWCC 1 cut(s) 953
BmgT120I GGNCC 2 cut(s) 239, 953
BmiI GGNNCC 4 cut(s) 184, 202, 415, 761
BmrFI CCNGG 2 cut(s) 381, 830
BmsI GCATC 2 cut(s) 458, 991
BmtI GCTAGC 2 cut(s) 90, 578
BpuEI CTTGAG 1 cut(s) 806
BpuMI CCSGG 1 cut(s) 381
BsaHI GRCGYC 1 cut(s) 93
BsaI GGTCTC 1 cut(s) 903
BsaWI WCCGGW 6 cut(s) 155, 185, 197, 221, 416, 443
Bsc4I CCNNNNNNNGG 4 cut(s) 120, 638, 905, 923
Bse118I RCCGGY 2 cut(s) 863, 1147
Bse1I ACTGG 3 cut(s) 408, 671, 813
Bse3DI GCAATG 2 cut(s) 1068, 1142
BseAI TCCGGA 2 cut(s) 155, 185
BseBI CCWGG 1 cut(s) 830
BseGI GGATG 1 cut(s) 684
BseLI CCNNNNNNNGG 4 cut(s) 120, 638, 905, 923
BseMI GCAATG 2 cut(s) 1068, 1142
BseNI ACTGG 3 cut(s) 408, 671, 813
BsePI GCGCGC 2 cut(s) 1037, 1039
BseRI GAGGAG 3 cut(s) 103, 525, 960
BseXI GCAGC 6 cut(s) 57, 114, 117, 120, 847, 862
BseYI CCCAGC 3 cut(s) 614, 848, 967
BsgI GTGCAG 1 cut(s) 942
Bsh1236I CGCG 3 cut(s) 508, 1039, 1041
BshFI GGCC 4 cut(s) 5, 240, 561, 1100
BsiHKAI GWGCWC 1 cut(s) 738
BslFI GGGAC 2 cut(s) 373, 865
BslI CCNNNNNNNGG 4 cut(s) 120, 638, 905, 923
BsmAI GTCTC 1 cut(s) 903
BsmFI GGGAC 2 cut(s) 373, 865
BsmI GAATGC 3 cut(s) 13, 175, 668
BsnI GGCC 4 cut(s) 5, 240, 561, 1100
Bso31I GGTCTC 1 cut(s) 903
Bsp1286I GDGCHC 1 cut(s) 738
Bsp13I TCCGGA 2 cut(s) 155, 185
Bsp143I GATC 3 cut(s) 643, 759, 1021
BspACI CCGC 4 cut(s) 18, 28, 395, 1177
BspANI GGCC 4 cut(s) 5, 240, 561, 1100
BspEI TCCGGA 2 cut(s) 155, 185
BspFNI CGCG 3 cut(s) 508, 1039, 1041
BspHI TCATGA 1 cut(s) 1199
BspLI GGNNCC 4 cut(s) 184, 202, 415, 761
BspOI GCTAGC 2 cut(s) 90, 578
BspPI GGATC 4 cut(s) 638, 754, 767, 1016
BspTI CTTAAG 1 cut(s) 320
BspTNI GGTCTC 1 cut(s) 903
BsrDI GCAATG 2 cut(s) 1068, 1142
BsrFI RCCGGY 2 cut(s) 863, 1147
BsrI ACTGG 3 cut(s) 408, 671, 813
BssAI RCCGGY 2 cut(s) 863, 1147
BssHII GCGCGC 2 cut(s) 1037, 1039
BssMI GATC 3 cut(s) 643, 759, 1021
BssNI GRCGYC 1 cut(s) 93
Bst2UI CCWGG 1 cut(s) 830
Bst4CI ACNGT 5 cut(s) 182, 346, 364, 728, 1011
Bst6I CTCTTC 3 cut(s) 121, 293, 429
BstACI GRCGYC 1 cut(s) 93
BstAFI CTTAAG 1 cut(s) 320
BstAPI GCANNNNNTGC 1 cut(s) 584
BstC8I GCNNGC 6 cut(s) 88, 576, 939, 1039, 1041, 1149
BstF5I GGATG 1 cut(s) 684
BstFNI CGCG 3 cut(s) 508, 1039, 1041
BstHHI GCGC 3 cut(s) 1039, 1041, 1043
BstKTI GATC 3 cut(s) 646, 762, 1024
BstMAI GTCTC 1 cut(s) 903
BstMBI GATC 3 cut(s) 643, 759, 1021
BstMWI GCNNNNNNNGC 4 cut(s) 92, 108, 584, 1097
BstNI CCWGG 1 cut(s) 830
BstNSI RCATGY 1 cut(s) 941
BstSCI CCNGG 2 cut(s) 379, 828
BstUI CGCG 3 cut(s) 508, 1039, 1041
BstV1I GCAGC 6 cut(s) 57, 114, 117, 120, 847, 862
BstX2I RGATCY 3 cut(s) 643, 759, 1021
BstXI CCANNNNNNTGG 1 cut(s) 1063
BstYI RGATCY 3 cut(s) 643, 759, 1021
BsuRI GGCC 4 cut(s) 5, 240, 561, 1100
BtsCI GGATG 1 cut(s) 684
BtsI GCAGTG 1 cut(s) 476
BtsIMutI CAGTG 3 cut(s) 476, 678, 806
Cac8I GCNNGC 6 cut(s) 88, 576, 939, 1039, 1041, 1149
CciI TCATGA 1 cut(s) 1199
CfoI GCGC 3 cut(s) 1039, 1041, 1043
Cfr10I RCCGGY 2 cut(s) 863, 1147
Cfr13I GGNCC 2 cut(s) 239, 953
CseI GACGC 3 cut(s) 80, 92, 101
Csp6I GTAC 3 cut(s) 504, 724, 833
CviAII CATG 6 cut(s) 137, 584, 839, 938, 1015, 1200
CviQI GTAC 3 cut(s) 504, 724, 833
DpnI GATC 3 cut(s) 645, 761, 1023
DpnII GATC 3 cut(s) 643, 759, 1021
DrdI GACNNNNNNGTC 1 cut(s) 59
DseDI GACNNNNNNGTC 1 cut(s) 59
EaeI YGGCCR 2 cut(s) 3, 559
Eam1104I CTCTTC 3 cut(s) 121, 293, 429
EarI CTCTTC 3 cut(s) 121, 293, 429
EciI GGCGGA 1 cut(s) 7
Eco147I AGGCCT 1 cut(s) 1100
Eco31I GGTCTC 1 cut(s) 903
Eco47I GGWCC 1 cut(s) 953
Eco57I CTGAAG 1 cut(s) 102
EcoO109I RGGNCCY 1 cut(s) 953
EcoRI GAATTC 2 cut(s) 676, 820
EcoRII CCWGG 1 cut(s) 828
FaeI CATG 6 cut(s) 140, 587, 842, 941, 1018, 1203
FaqI GGGAC 2 cut(s) 373, 865
FatI CATG 6 cut(s) 136, 583, 838, 937, 1014, 1199
Fnu4HI GCNGC 6 cut(s) 46, 103, 106, 109, 861, 876
FokI GGATG 1 cut(s) 671
Fsp4HI GCNGC 6 cut(s) 46, 103, 106, 109, 861, 876
FspBI CTAG 2 cut(s) 87, 575
GlaI GCGC 3 cut(s) 1038, 1040, 1042
GluI GCNGC 6 cut(s) 46, 103, 106, 109, 861, 876
GsaI CCCAGC 3 cut(s) 618, 852, 971
HaeIII GGCC 4 cut(s) 5, 240, 561, 1100
HgaI GACGC 3 cut(s) 80, 92, 101
HhaI GCGC 3 cut(s) 1039, 1041, 1043
Hin1I GRCGYC 1 cut(s) 93
Hin1II CATG 6 cut(s) 140, 587, 842, 941, 1018, 1203
Hin6I GCGC 3 cut(s) 1037, 1039, 1041
HinP1I GCGC 3 cut(s) 1037, 1039, 1041
HindIII AAGCTT 1 cut(s) 317
HinfI GANTC 6 cut(s) 38, 250, 256, 285, 744, 1139
HphI GGTGA 1 cut(s) 938
Hpy166II GTNNAC 1 cut(s) 126
Hpy188I TCNGA 6 cut(s) 52, 255, 311, 454, 648, 764
Hpy188III TCNNGA 5 cut(s) 156, 186, 754, 785, 1200
Hpy8I GTNNAC 1 cut(s) 126
Hpy99I CGWCG 5 cut(s) 74, 86, 95, 296, 377
HpyAV CCTTC 1 cut(s) 1090
HpyCH4III ACNGT 5 cut(s) 182, 346, 364, 728, 1011
HpyCH4IV ACGT 1 cut(s) 375
HpyCH4V TGCA 7 cut(s) 367, 449, 481, 550, 587, 937, 959
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 108, 584, 1097
HpySE526I ACGT 1 cut(s) 375
Hsp92I GRCGYC 1 cut(s) 93
Hsp92II CATG 6 cut(s) 140, 587, 842, 941, 1018, 1203
HspAI GCGC 3 cut(s) 1037, 1039, 1041
Kpn2I TCCGGA 2 cut(s) 155, 185
KroI GCCGGC 1 cut(s) 1147
KroNI GCCGGC 1 cut(s) 1149
Kzo9I GATC 3 cut(s) 643, 759, 1021
LmnI GCTCC 3 cut(s) 53, 116, 1088
Lsp1109I GCAGC 6 cut(s) 57, 114, 117, 120, 847, 862
LweI GCATC 2 cut(s) 458, 991
MaeI CTAG 2 cut(s) 87, 575
MaeII ACGT 1 cut(s) 375
MaeIII GTNAC 1 cut(s) 346
MalI GATC 3 cut(s) 645, 761, 1023
MboI GATC 3 cut(s) 643, 759, 1021
MboII GAAGA 4 cut(s) 108, 280, 446, 1085
MflI RGATCY 3 cut(s) 643, 759, 1021
MhlI GDGCHC 1 cut(s) 738
MlsI TGGCCA 2 cut(s) 5, 561
MluNI TGGCCA 2 cut(s) 5, 561
MlyI GAGTC 4 cut(s) 265, 279, 753, 1148
MmeI TCCRAC 3 cut(s) 75, 600, 908
Mox20I TGGCCA 2 cut(s) 5, 561
MroI TCCGGA 2 cut(s) 155, 185
MroNI GCCGGC 1 cut(s) 1147
MroXI GAANNNNTTC 2 cut(s) 181, 824
MscI TGGCCA 2 cut(s) 5, 561
MseI TTAA 3 cut(s) 321, 390, 1032
MslI CAYNNNNRTG 2 cut(s) 30, 843
Msp20I TGGCCA 2 cut(s) 5, 561
MspA1I CMGCKG 1 cut(s) 971
MspCI CTTAAG 1 cut(s) 320
MspR9I CCNGG 2 cut(s) 381, 830
Mva1269I GAATGC 3 cut(s) 13, 175, 668
MvaI CCWGG 1 cut(s) 830
MvnI CGCG 3 cut(s) 508, 1039, 1041
MwoI GCNNNNNNNGC 4 cut(s) 92, 108, 584, 1097
NaeI GCCGGC 1 cut(s) 1149
NciI CCSGG 1 cut(s) 381
NdeII GATC 3 cut(s) 643, 759, 1021
NgoMIV GCCGGC 1 cut(s) 1147
NheI GCTAGC 2 cut(s) 86, 574
NlaIII CATG 6 cut(s) 140, 587, 842, 941, 1018, 1203
NlaIV GGNNCC 4 cut(s) 184, 202, 415, 761
NspI RCATGY 1 cut(s) 941
OliI CACNNNNGTG 1 cut(s) 30
PaeI GCATGC 1 cut(s) 941
PagI TCATGA 1 cut(s) 1199
PauI GCGCGC 2 cut(s) 1037, 1039
PceI AGGCCT 1 cut(s) 1100
PcsI WCGNNNNNNNCGW 2 cut(s) 78, 87
PctI GAATGC 3 cut(s) 13, 175, 668
PdiI GCCGGC 1 cut(s) 1149
PdmI GAANNNNTTC 2 cut(s) 181, 824
PfeI GAWTC 2 cut(s) 38, 250
PflMI CCANNNNNTGG 1 cut(s) 905
PfoI TCCNGGA 1 cut(s) 379
PkrI GCNGC 6 cut(s) 47, 104, 107, 110, 862, 877
PleI GAGTC 4 cut(s) 264, 279, 752, 1147
PpsI GAGTC 4 cut(s) 264, 279, 752, 1147
PpuMI RGGWCCY 1 cut(s) 953
Psp5II RGGWCCY 1 cut(s) 953
Psp6I CCWGG 1 cut(s) 828
PspFI CCCAGC 3 cut(s) 614, 848, 967
PspGI CCWGG 1 cut(s) 828
PspN4I GGNNCC 4 cut(s) 184, 202, 415, 761
PspPI GGNCC 2 cut(s) 239, 953
PspPPI RGGWCCY 1 cut(s) 953
PsuI RGATCY 3 cut(s) 643, 759, 1021
PteI GCGCGC 2 cut(s) 1037, 1039
PvuII CAGCTG 1 cut(s) 971
RsaI GTAC 3 cut(s) 505, 725, 834
RsaNI GTAC 3 cut(s) 504, 724, 833
RseI CAYNNNNRTG 2 cut(s) 30, 843
SaqAI TTAA 3 cut(s) 321, 390, 1032
SatI GCNGC 6 cut(s) 46, 103, 106, 109, 861, 876
Sau3AI GATC 3 cut(s) 643, 759, 1021
Sau96I GGNCC 2 cut(s) 239, 953
ScaI AGTACT 1 cut(s) 725
SchI GAGTC 4 cut(s) 265, 279, 753, 1148
ScrFI CCNGG 2 cut(s) 381, 830
SduI GDGCHC 1 cut(s) 738
SfaNI GCATC 2 cut(s) 458, 991
SinI GGWCC 1 cut(s) 953
SmiMI CAYNNNNRTG 2 cut(s) 30, 843
SmlI CTYRAG 2 cut(s) 320, 785
SmoI CTYRAG 2 cut(s) 320, 785
SphI GCATGC 1 cut(s) 941
SseBI AGGCCT 1 cut(s) 1100
SsiI CCGC 4 cut(s) 18, 28, 395, 1177
SspMI CTAG 2 cut(s) 87, 575
StuI AGGCCT 1 cut(s) 1100
StyD4I CCNGG 2 cut(s) 379, 828
TaaI ACNGT 5 cut(s) 182, 346, 364, 728, 1011
TaiI ACGT 1 cut(s) 378
TaqI TCGA 6 cut(s) 81, 167, 215, 291, 372, 1153
TatI WGTACW 1 cut(s) 723
TfiI GAWTC 2 cut(s) 38, 250
Tru1I TTAA 3 cut(s) 321, 390, 1032
Tru9I TTAA 3 cut(s) 321, 390, 1032
TscAI CASTG 3 cut(s) 483, 678, 813
TseI GCWGC 6 cut(s) 45, 102, 105, 108, 860, 875
TspDTI ATGAA 5 cut(s) 447, 1003, 1086, 1094, 1188
TspGWI ACGGA 2 cut(s) 49, 365
TspRI CASTG 3 cut(s) 483, 678, 813
Van91I CCANNNNNTGG 1 cut(s) 905
Vha464I CTTAAG 1 cut(s) 320
VpaK11BI GGWCC 1 cut(s) 953
XapI RAATTY 3 cut(s) 589, 676, 820
XceI RCATGY 1 cut(s) 941
XcmI CCANNNNNNNNNTGG 1 cut(s) 836
XmnI GAANNNNTTC 2 cut(s) 181, 824
XspI CTAG 2 cut(s) 87, 575
ZrmI AGTACT 1 cut(s) 725
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.