Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0003147

Physical Location & Seq

Genomic Coordinates Forward (+)

18857612 .. 18861491

Gene Structure 3880 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1088200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGAGTTGAACCCAAGTTCTGGATCATGTTATCATATATGTTCGGTTGACGAAACAAGCTCGGAAGAATTTAAGGCCAGGTACCGGCCGAAGACTTATTTGCTGAAAGCCATTGCAGTATTTGCAGCAGCTGGAACAGGGGCAGTGGCAATTTACCACTCCTGGGTTGCTGCCAATCAGGATGTTGCCATGGCATTGCTGTTCGGAATAGGATATGTGGGCATCATTTTTGAAGAATCGCTGGCCTTCAACAAAAGTGGAGTAGGTCTGTTAATGGCTGTGAGCTTGTGGGCAGTAAGAAGTATTGGGGCTCCTTCAACAGATATAGCTGTTTCAGAGTTACAACATGCATTTGCTGAAGCCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTCGAGATAGTTGATTCACATCAAGGATTTAAGCTGGTTACTGACAATATAACCACTCGAAAGCCAAGGACGCTTCTTTGGGTGGTGGGTTTTGTCACTTTTCTCCTTAGTGCAATTCTTGACAACTTGACGTCTACCATTTTCATGGTTTCTTTATTGCGAAAATTAGTTCCTCAGTCAGAATTTCGCAAGCTCTTAGGAGCTGTTGTTGTCATAGCAGCAAATGCCGGTGGTGCATGGACTCCTATTGGTGATGTTACCACTACTATGCTGTGGATACATGGTCAGATATCCACATTGGAGATAATGAAGGTCCTTTTCTTCTTCTATCCTGAATATGGAAAGGTTGAACTGCAAATCTGTTGCAATTGGATGATAGATCTATTGGTGTCCTCTGAGGATGGGCATGAGAGTTGCTACCTCTGTTTTGAGGGAGTGGGAGGAAAGCGTCACCGGAGCCGCCTAAGTGCACCTCAGCGGTGCTTTGCCTCACGCCTAGGCCGGGCTATTGCTTGGACGCCTCGTCCACGCCTCACGATTGCTTTAGAGACCTTGTTTATACCTTCGGCCGTCTGTCTTGCTGTTCCACTGGCGCTTATGTCCCTGACTAGTGGAGTAAGTGGGGAAGGACCAGACACGTCCGATGTTATGGCATCTGAGGAGATGGCACCTCGGGGACAGCTTGTTTTCTCTGTAGGCATTGGAGCTTTGGTTTTTGTTCCAGTGTTCAAGGCCCTAACTGGTTTGCCTCCGCACATGGGTATGTTGCTGGGACTTGGAGTACTTTGGATTCTGACTGATGCTATTCATTACGGTGAATCGGAAAGACACAGGTTAAAAGTACCGCAGGCCTTGTCCCGGATTGACACTCAAGGAGCACTCTTCTTCCTTGGCATCCTATTGTCTGTTCGCAGCCTGGAGGCGGCAGGAATTCTTGGAGAAATAGCAAATTACCTGGATGCCCACATTCCCAATATTGAGCTGATTGCAAGTTCAATAGGAGTTGATCAGCGATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006814 GO:0006820 GO:0006848 GO:0006950 GO:0006970 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009941 GO:0015075 GO:0015291 GO:0015297 GO:0015318 GO:0015672 GO:0015711 GO:0015718 GO:0015849 GO:0022804 GO:0022857 GO:0030001 GO:0031967 GO:0031975 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050833 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098656 GO:1901475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CitMHS

Protein Analysis

474

Amino Acids

51.23

Weight (kDa)

5.9

Isoelectric Point (pI)

39.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CitMHS	PF03600	72 - 458	2e-22	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49810 AT3G19490
fragaria_vesca	FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320
malus_domestica	MD05G1088200.v1.1
prunus_persica	Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1
pyrus_communis	pycom05g08760 pycom10g08240
rosa_chinensis	RchiOBHm_Chr6g0255461 RchiOBHm_Chr6g0255491 RchiOBHm_Chr6g0255511 RchiOBHm_Chr6g0255521
rosa_laevigata	RLG00000014834 RLG00000014835
rosa_multiflora	Rmu_sc0002360.1_g000008
rosa_roxburghii	Rroxscaffold_7G00209940 Rroxscaffold_7G00209960
rosa_rugosa	Rorug05G0559000 Rorug05G0559100 Rorug05G0559100
rosa_samantha	Rh6AG076700 Rh6AG077100 Rh6AG077200 Rh6BG069500 Rh6BG069800 Rh6CG068500 Rh6DG065300
rosa_wichuraiana	Rw6G006660 Rw6G006680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	536
Acc65I	GGTACC	1 cut(s)	81
AccB1I	GGYRCC	2 cut(s)	81, 1069
AccB7I	CCANNNNNTGG	1 cut(s)	20
AccI	GTMKAC	1 cut(s)	536
AciI	CCGC	5 cut(s)	862, 880, 1154, 1247, 1325
AclWI	GGATC	1 cut(s)	31
AcoI	YGGCCR	2 cut(s)	86, 969
AcsI	RAATTY	3 cut(s)	68, 584, 1332
AcuI	CTGAAG	1 cut(s)	378
AcyI	GRCGYC	2 cut(s)	533, 920
AfaI	GTAC	3 cut(s)	83, 1185, 1245
AfiI	CCNNNNNNNGG	8 cut(s)	20, 84, 163, 740, 904, 1160, 1260, 1324
AflIII	ACRYGT	1 cut(s)	1038
AgsI	TTSAA	7 cut(s)	10, 233, 250, 318, 752, 1132, 1398
AhdI	GACNNNNNGTC	1 cut(s)	924
AhlI	ACTAGT	1 cut(s)	1010
AjiI	CACGTC	1 cut(s)	1041
AjnI	CCWGG	4 cut(s)	77, 161, 1317, 1356
Alw21I	GWGCWC	2 cut(s)	874, 1282
Alw26I	GTCTC	1 cut(s)	944
Alw44I	GTGCAC	1 cut(s)	870
AlwI	GGATC	1 cut(s)	31
AlwNI	CAGNNNCTG	1 cut(s)	131
Ama87I	CYCGRG	1 cut(s)	1074
AoxI	GGCC	7 cut(s)	75, 86, 243, 901, 969, 1134, 1251
ApaLI	GTGCAC	1 cut(s)	870
ApeKI	GCWGC	5 cut(s)	125, 128, 170, 620, 1314
ApoI	RAATTY	3 cut(s)	68, 584, 1332
Asp718I	GGTACC	1 cut(s)	81
AspA2I	CCTAGG	1 cut(s)	898
AspLEI	GCGC	1 cut(s)	997
AspS9I	GGNCC	3 cut(s)	715, 1031, 1135
AsuC2I	CCSGG	2 cut(s)	905, 1261
AsuHPI	GGTGA	3 cut(s)	665, 845, 1229
AvaI	CYCGRG	1 cut(s)	1074
AvaII	GGWCC	2 cut(s)	715, 1031
AvrII	CCTAGG	1 cut(s)	898
BaeGI	GKGCMC	1 cut(s)	874
BanI	GGYRCC	2 cut(s)	81, 1069
BanII	GRGCYC	1 cut(s)	313
BbsI	GAAGAC	1 cut(s)	98
Bbv12I	GWGCWC	2 cut(s)	874, 1282
BbvCI	CCTCAGC	1 cut(s)	876
BbvI	GCAGC	5 cut(s)	137, 140, 157, 632, 1326
BccI	CCATC	2 cut(s)	797, 1060
BceAI	ACGGC	1 cut(s)	956
BciT130I	CCWGG	4 cut(s)	79, 163, 1319, 1358
BciVI	GTATCC	1 cut(s)	672
BclI	TGATCA	1 cut(s)	1408
BcnI	CCSGG	2 cut(s)	905, 1261
BcoDI	GTCTC	1 cut(s)	944
BcuI	ACTAGT	1 cut(s)	1010
BfaI	CTAG	2 cut(s)	899, 1011
BfmI	CTRYAG	1 cut(s)	1095
BfoI	RGCGCY	1 cut(s)	998
BfuI	GTATCC	1 cut(s)	672
BglII	AGATCT	1 cut(s)	781
BisI	GCNGC	7 cut(s)	126, 129, 171, 621, 862, 1315, 1326
BlnI	CCTAGG	1 cut(s)	898
BlsI	GCNGC	7 cut(s)	127, 130, 172, 622, 863, 1316, 1327
BmcAI	AGTACT	1 cut(s)	1185
Bme1390I	CCNGG	6 cut(s)	79, 163, 905, 1261, 1319, 1358
Bme18I	GGWCC	2 cut(s)	715, 1031
BmeRI	GACNNNNNGTC	1 cut(s)	924
BmeT110I	CYCGRG	1 cut(s)	1074
BmgBI	CACGTC	1 cut(s)	1041
BmgT120I	GGNCC	3 cut(s)	715, 1031, 1135
BmiI	GGNNCC	4 cut(s)	83, 312, 860, 1071
BmrFI	CCNGG	6 cut(s)	79, 163, 905, 1261, 1319, 1358
BmsI	GCATC	5 cut(s)	231, 1064, 1192, 1305, 1351
BoxI	GACNNNNGTC	1 cut(s)	401
BpiI	GAAGAC	1 cut(s)	98
BpmI	CTGGAG	1 cut(s)	1340
Bpu10I	CCTNAGC	1 cut(s)	876
BpuEI	CTTGAG	1 cut(s)	1257
BpuMI	CCSGG	2 cut(s)	905, 1261
BsaBI	GATNNNNATC	1 cut(s)	420
BsaHI	GRCGYC	2 cut(s)	533, 920
BsaI	GGTCTC	1 cut(s)	944
BsaJI	CCNNGG	6 cut(s)	162, 189, 467, 898, 1073, 1291
BsaWI	WCCGGW	1 cut(s)	855
BsaXI	ACNNNNNCTCC	4 cut(s)	594, 624, 1098, 1128
Bsc4I	CCNNNNNNNGG	8 cut(s)	20, 84, 163, 740, 904, 1160, 1260, 1324
Bse118I	RCCGGY	2 cut(s)	84, 629
Bse1I	ACTGG	4 cut(s)	363, 996, 1124, 1147
Bse3DI	GCAATG	3 cut(s)	111, 194, 399
Bse8I	GATNNNNATC	1 cut(s)	420
BseBI	CCWGG	4 cut(s)	79, 163, 1319, 1358
BseDI	CCNNGG	6 cut(s)	162, 189, 467, 898, 1073, 1291
BseGI	GGATG	5 cut(s)	187, 780, 808, 1296, 1366
BseJI	GATNNNNATC	1 cut(s)	420
BseLI	CCNNNNNNNGG	8 cut(s)	20, 84, 163, 740, 904, 1160, 1260, 1324
BseMI	GCAATG	3 cut(s)	111, 194, 399
BseMII	CTCAG	4 cut(s)	590, 789, 890, 1050
BseNI	ACTGG	4 cut(s)	363, 996, 1124, 1147
BseRI	GAGGAG	1 cut(s)	1076
BseSI	GKGCMC	1 cut(s)	874
BseX3I	CGGCCG	2 cut(s)	86, 969
BseXI	GCAGC	5 cut(s)	137, 140, 157, 632, 1326
BseYI	CCCAGC	1 cut(s)	1171
Bsh1285I	CGRYCG	2 cut(s)	89, 972
BshFI	GGCC	7 cut(s)	77, 88, 245, 903, 971, 1136, 1253
BshNI	GGYRCC	2 cut(s)	81, 1069
BsiEI	CGRYCG	2 cut(s)	89, 972
BsiHKAI	GWGCWC	2 cut(s)	874, 1282
BsiHKCI	CYCGRG	1 cut(s)	1074
BsiSI	CCGG	5 cut(s)	85, 630, 856, 904, 1261
BslFI	GGGAC	4 cut(s)	988, 1092, 1188, 1243
BslI	CCNNNNNNNGG	8 cut(s)	20, 84, 163, 740, 904, 1160, 1260, 1324
BsmAI	GTCTC	1 cut(s)	944
BsmFI	GGGAC	4 cut(s)	988, 1092, 1188, 1243
BsnI	GGCC	7 cut(s)	77, 88, 245, 903, 971, 1136, 1253
Bso31I	GGTCTC	1 cut(s)	944
BsoBI	CYCGRG	1 cut(s)	1074
Bsp1286I	GDGCHC	3 cut(s)	313, 874, 1282
Bsp143I	GATC	3 cut(s)	23, 781, 1408
Bsp19I	CCATGG	1 cut(s)	189
BspACI	CCGC	5 cut(s)	862, 880, 1154, 1247, 1325
BspANI	GGCC	7 cut(s)	77, 88, 245, 903, 971, 1136, 1253
BspCNI	CTCAG	4 cut(s)	589, 790, 889, 1051
BspLI	GGNNCC	4 cut(s)	83, 312, 860, 1071
BspPI	GGATC	1 cut(s)	31
BspT107I	GGYRCC	2 cut(s)	81, 1069
BspTNI	GGTCTC	1 cut(s)	944
BsrDI	GCAATG	3 cut(s)	111, 194, 399
BsrFI	RCCGGY	2 cut(s)	84, 629
BsrI	ACTGG	4 cut(s)	363, 996, 1124, 1147
BssAI	RCCGGY	2 cut(s)	84, 629
BssECI	CCNNGG	6 cut(s)	162, 189, 467, 898, 1073, 1291
BssMI	GATC	3 cut(s)	23, 781, 1408
BssNI	GRCGYC	2 cut(s)	533, 920
BssT1I	CCWWGG	4 cut(s)	189, 467, 898, 1291
Bst2UI	CCWGG	4 cut(s)	79, 163, 1319, 1358
Bst4CI	ACNGT	1 cut(s)	1217
Bst6I	CTCTTC	1 cut(s)	1289
BstACI	GRCGYC	2 cut(s)	533, 920
BstAPI	GCANNNNNTGC	2 cut(s)	122, 626
BstC8I	GCNNGC	3 cut(s)	243, 593, 1251
BstDEI	CTNAG	7 cut(s)	509, 576, 598, 798, 866, 876, 1059
BstDSI	CCRYGG	1 cut(s)	189
BstF5I	GGATG	5 cut(s)	187, 780, 808, 1296, 1366
BstH2I	RGCGCY	1 cut(s)	998
BstHHI	GCGC	1 cut(s)	997
BstKTI	GATC	3 cut(s)	26, 784, 1411
BstMAI	GTCTC	1 cut(s)	944
BstMBI	GATC	3 cut(s)	23, 781, 1408
BstMCI	CGRYCG	2 cut(s)	89, 972
BstMWI	GCNNNNNNNGC	4 cut(s)	122, 472, 626, 635
BstNI	CCWGG	4 cut(s)	79, 163, 1319, 1358
BstNSI	RCATGY	1 cut(s)	350
BstPAI	GACNNNNGTC	1 cut(s)	401
BstSCI	CCNGG	6 cut(s)	77, 161, 903, 1259, 1317, 1356
BstSFI	CTRYAG	1 cut(s)	1095
BstSLI	GKGCMC	1 cut(s)	874
BstV1I	GCAGC	5 cut(s)	137, 140, 157, 632, 1326
BstV2I	GAAGAC	1 cut(s)	98
BstX2I	RGATCY	1 cut(s)	781
BstXI	CCANNNNNNTGG	1 cut(s)	547
BstYI	RGATCY	1 cut(s)	781
BstZI	CGGCCG	2 cut(s)	86, 969
BsuI	GTATCC	1 cut(s)	672
BsuRI	GGCC	7 cut(s)	77, 88, 245, 903, 971, 1136, 1253
BtgI	CCRYGG	1 cut(s)	189
BtrI	CACGTC	1 cut(s)	1041
BtsCI	GGATG	5 cut(s)	187, 780, 808, 1296, 1366
BtsI	GCAGTG	1 cut(s)	150
BtsIMutI	CAGTG	4 cut(s)	150, 370, 989, 1131
Cac8I	GCNNGC	3 cut(s)	243, 593, 1251
CaiI	CAGNNNCTG	1 cut(s)	131
CfoI	GCGC	1 cut(s)	997
Cfr10I	RCCGGY	2 cut(s)	84, 629
Cfr13I	GGNCC	3 cut(s)	715, 1031, 1135
CseI	GACGC	3 cut(s)	481, 839, 928
Csp6I	GTAC	3 cut(s)	82, 1184, 1244
CspCI	CAANNNNNGTGG	2 cut(s)	238, 273
CviAII	CATG	8 cut(s)	27, 190, 347, 547, 639, 683, 809, 1159
CviQI	GTAC	3 cut(s)	82, 1184, 1244
DdeI	CTNAG	7 cut(s)	509, 576, 598, 798, 866, 876, 1059
DpnI	GATC	3 cut(s)	25, 783, 1410
DpnII	GATC	3 cut(s)	23, 781, 1408
DriI	GACNNNNNGTC	1 cut(s)	924
EaeI	YGGCCR	2 cut(s)	86, 969
EagI	CGGCCG	2 cut(s)	86, 969
Eam1104I	CTCTTC	1 cut(s)	1289
Eam1105I	GACNNNNNGTC	1 cut(s)	924
EarI	CTCTTC	1 cut(s)	1289
EclXI	CGGCCG	2 cut(s)	86, 969
Eco130I	CCWWGG	4 cut(s)	189, 467, 898, 1291
Eco147I	AGGCCT	1 cut(s)	1253
Eco24I	GRGCYC	1 cut(s)	313
Eco31I	GGTCTC	1 cut(s)	944
Eco32I	GATATC	1 cut(s)	693
Eco47I	GGWCC	2 cut(s)	715, 1031
Eco52I	CGGCCG	2 cut(s)	86, 969
Eco57I	CTGAAG	1 cut(s)	378
Eco88I	CYCGRG	1 cut(s)	1074
EcoO109I	RGGNCCY	2 cut(s)	715, 1135
EcoRI	GAATTC	1 cut(s)	1332
EcoRII	CCWGG	4 cut(s)	77, 161, 1317, 1356
EcoRV	GATATC	1 cut(s)	693
EcoT14I	CCWWGG	4 cut(s)	189, 467, 898, 1291
EcoT22I	ATGCAT	1 cut(s)	352
EcoT38I	GRGCYC	1 cut(s)	313
ErhI	CCWWGG	4 cut(s)	189, 467, 898, 1291
FaeI	CATG	8 cut(s)	30, 193, 350, 550, 642, 686, 812, 1162
FaqI	GGGAC	4 cut(s)	988, 1092, 1188, 1243
FatI	CATG	8 cut(s)	26, 189, 346, 546, 638, 682, 808, 1158
FbaI	TGATCA	1 cut(s)	1408
FblI	GTMKAC	1 cut(s)	536
Fnu4HI	GCNGC	7 cut(s)	126, 129, 171, 621, 862, 1315, 1326
FokI	GGATG	5 cut(s)	194, 787, 815, 1283, 1373
FriOI	GRGCYC	1 cut(s)	313
Fsp4HI	GCNGC	7 cut(s)	126, 129, 171, 621, 862, 1315, 1326
FspBI	CTAG	2 cut(s)	899, 1011
GlaI	GCGC	1 cut(s)	996
GluI	GCNGC	7 cut(s)	126, 129, 171, 621, 862, 1315, 1326
GsaI	CCCAGC	1 cut(s)	1175
GsuI	CTGGAG	1 cut(s)	1340
HaeII	RGCGCY	1 cut(s)	998
HaeIII	GGCC	7 cut(s)	77, 88, 245, 903, 971, 1136, 1253
HapII	CCGG	5 cut(s)	85, 630, 856, 904, 1261
HgaI	GACGC	3 cut(s)	481, 839, 928
HhaI	GCGC	1 cut(s)	997
Hin1I	GRCGYC	2 cut(s)	533, 920
Hin1II	CATG	8 cut(s)	30, 193, 350, 550, 642, 686, 812, 1162
Hin6I	GCGC	1 cut(s)	995
HinP1I	GCGC	1 cut(s)	995
HincII	GTYRAC	1 cut(s)	49
HindII	GTYRAC	1 cut(s)	49
HinfI	GANTC	5 cut(s)	236, 416, 643, 1192, 1220
HpaII	CCGG	5 cut(s)	85, 630, 856, 904, 1261
HphI	GGTGA	3 cut(s)	665, 845, 1229
Hpy166II	GTNNAC	4 cut(s)	49, 537, 872, 929
Hpy188III	TCNNGA	6 cut(s)	21, 179, 406, 521, 734, 937
Hpy8I	GTNNAC	4 cut(s)	49, 537, 872, 929
HpyAV	CCTTC	5 cut(s)	256, 324, 706, 975, 1022
HpyCH4III	ACNGT	1 cut(s)	1217
HpyCH4IV	ACGT	2 cut(s)	533, 1040
HpyF10VI	GCNNNNNNNGC	4 cut(s)	122, 472, 626, 635
HpyF3I	CTNAG	7 cut(s)	509, 576, 598, 798, 866, 876, 1059
HpySE526I	ACGT	2 cut(s)	533, 1040
Hsp92I	GRCGYC	2 cut(s)	533, 920
Hsp92II	CATG	8 cut(s)	30, 193, 350, 550, 642, 686, 812, 1162
HspAI	GCGC	1 cut(s)	995
KpnI	GGTACC	1 cut(s)	85
Ksp22I	TGATCA	1 cut(s)	1408
Kzo9I	GATC	3 cut(s)	23, 781, 1408
LmnI	GCTCC	5 cut(s)	316, 602, 858, 1106, 1277
Lsp1109I	GCAGC	5 cut(s)	137, 140, 157, 632, 1326
LweI	GCATC	5 cut(s)	231, 1064, 1192, 1305, 1351
MaeI	CTAG	2 cut(s)	899, 1011
MaeII	ACGT	2 cut(s)	533, 1040
MaeIII	GTNAC	5 cut(s)	339, 439, 496, 658, 851
MalI	GATC	3 cut(s)	25, 783, 1410
MboI	GATC	3 cut(s)	23, 781, 1408
MboII	GAAGA	7 cut(s)	77, 103, 245, 715, 718, 1276, 1279
MfeI	CAATTG	1 cut(s)	769
MflI	RGATCY	1 cut(s)	781
MhlI	GDGCHC	3 cut(s)	313, 874, 1282
MluCI	AATT	8 cut(s)	68, 150, 516, 566, 584, 769, 1332, 1351
MlyI	GAGTC	1 cut(s)	637
Mph1103I	ATGCAT	1 cut(s)	352
MseI	TTAA	4 cut(s)	72, 272, 432, 1238
MslI	CAYNNNNRTG	4 cut(s)	545, 668, 1163, 1215
MspA1I	CMGCKG	2 cut(s)	131, 880
MspI	CCGG	5 cut(s)	85, 630, 856, 904, 1261
MspR9I	CCNGG	6 cut(s)	79, 163, 905, 1261, 1319, 1358
MunI	CAATTG	1 cut(s)	769
MvaI	CCWGG	4 cut(s)	79, 163, 1319, 1358
MwoI	GCNNNNNNNGC	4 cut(s)	122, 472, 626, 635
NciI	CCSGG	2 cut(s)	905, 1261
NcoI	CCATGG	1 cut(s)	189
NdeII	GATC	3 cut(s)	23, 781, 1408
NlaIII	CATG	8 cut(s)	30, 193, 350, 550, 642, 686, 812, 1162
NlaIV	GGNNCC	4 cut(s)	83, 312, 860, 1071
NmuCI	GTSAC	2 cut(s)	496, 851
NsiI	ATGCAT	1 cut(s)	352
NspI	RCATGY	1 cut(s)	350
PceI	AGGCCT	1 cut(s)	1253
PfeI	GAWTC	4 cut(s)	236, 416, 1192, 1220
PflMI	CCANNNNNTGG	1 cut(s)	20
PfoI	TCCNGGA	1 cut(s)	1259
PkrI	GCNGC	7 cut(s)	127, 130, 172, 622, 863, 1316, 1327
PleI	GAGTC	1 cut(s)	637
PpsI	GAGTC	1 cut(s)	637
PpuMI	RGGWCCY	1 cut(s)	715
PshAI	GACNNNNGTC	1 cut(s)	401
Psp5II	RGGWCCY	1 cut(s)	715
Psp6I	CCWGG	4 cut(s)	77, 161, 1317, 1356
PspFI	CCCAGC	1 cut(s)	1171
PspGI	CCWGG	4 cut(s)	77, 161, 1317, 1356
PspN4I	GGNNCC	4 cut(s)	83, 312, 860, 1071
PspPI	GGNCC	3 cut(s)	715, 1031, 1135
PspPPI	RGGWCCY	1 cut(s)	715
PstNI	CAGNNNCTG	1 cut(s)	131
PsuI	RGATCY	1 cut(s)	781
PvuII	CAGCTG	1 cut(s)	131
RsaI	GTAC	3 cut(s)	83, 1185, 1245
RsaNI	GTAC	3 cut(s)	82, 1184, 1244
RseI	CAYNNNNRTG	4 cut(s)	545, 668, 1163, 1215
SaqAI	TTAA	4 cut(s)	72, 272, 432, 1238
SatI	GCNGC	7 cut(s)	126, 129, 171, 621, 862, 1315, 1326
Sau3AI	GATC	3 cut(s)	23, 781, 1408
Sau96I	GGNCC	3 cut(s)	715, 1031, 1135
ScaI	AGTACT	1 cut(s)	1185
SchI	GAGTC	1 cut(s)	637
ScrFI	CCNGG	6 cut(s)	79, 163, 905, 1261, 1319, 1358
SduI	GDGCHC	3 cut(s)	313, 874, 1282
SfaNI	GCATC	5 cut(s)	231, 1064, 1192, 1305, 1351
SfcI	CTRYAG	1 cut(s)	1095
SinI	GGWCC	2 cut(s)	715, 1031
SmiMI	CAYNNNNRTG	4 cut(s)	545, 668, 1163, 1215
SmlI	CTYRAG	1 cut(s)	1272
SmoI	CTYRAG	1 cut(s)	1272
SpeI	ACTAGT	1 cut(s)	1010
Sse9I	AATT	8 cut(s)	68, 150, 516, 566, 584, 769, 1332, 1351
SseBI	AGGCCT	1 cut(s)	1253
SsiI	CCGC	5 cut(s)	862, 880, 1154, 1247, 1325
SspI	AATATT	1 cut(s)	1378
SspMI	CTAG	2 cut(s)	899, 1011
StuI	AGGCCT	1 cut(s)	1253
StyD4I	CCNGG	6 cut(s)	77, 161, 903, 1259, 1317, 1356
StyI	CCWWGG	4 cut(s)	189, 467, 898, 1291
TaaI	ACNGT	1 cut(s)	1217
TaiI	ACGT	2 cut(s)	536, 1043
TaqI	TCGA	2 cut(s)	405, 460
TasI	AATT	8 cut(s)	68, 150, 516, 566, 584, 769, 1332, 1351
TatI	WGTACW	1 cut(s)	1183
TauI	GCSGC	2 cut(s)	864, 1328
TfiI	GAWTC	4 cut(s)	236, 416, 1192, 1220
Tru1I	TTAA	4 cut(s)	72, 272, 432, 1238
Tru9I	TTAA	4 cut(s)	72, 272, 432, 1238
TscAI	CASTG	4 cut(s)	150, 370, 996, 1131
TseFI	GTSAC	2 cut(s)	496, 851
TseI	GCWGC	5 cut(s)	125, 128, 170, 620, 1314
Tsp45I	GTSAC	2 cut(s)	496, 851
TspDTI	ATGAA	3 cut(s)	535, 725, 1199
TspRI	CASTG	4 cut(s)	150, 370, 996, 1131
Van91I	CCANNNNNTGG	1 cut(s)	20
VneI	GTGCAC	1 cut(s)	870
VpaK11BI	GGWCC	2 cut(s)	715, 1031
XapI	RAATTY	3 cut(s)	68, 584, 1332
XceI	RCATGY	1 cut(s)	350
XmaJI	CCTAGG	1 cut(s)	898
XmiI	GTMKAC	1 cut(s)	536
XspI	CTAG	2 cut(s)	899, 1011
ZraI	GACGTC	1 cut(s)	534
ZrmI	AGTACT	1 cut(s)	1185
Zsp2I	ATGCAT	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.