Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003147

Physical Location & Seq

Genomic Coordinates Reverse (-)

11119969 .. 11125278

Gene Structure 5310 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG077100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGCTTCCCTTTCATTTGGGGCGCATATGCCACAGTCCCACCCCCAATTCAAGAACAGCTCGCGGCGGTTTCTCTCTCAGACCCAAAGCTTTGCTCCTTTTGGTTCGTCTTTACGTGGATTCAGAGGCCCAAGATTGCTGGGCAATGGAATGTTGGTCAGAGCTGAAGAGAGAGCCAGAGGTTCGGGTTCGGGTCAGCTGCCCAAAGCTCAGTCCCAGTCTGAGAAAGAGTTGCAGGAGTTGACACAAAGTTCTGGATCATGTGATCCTTTATGTTCGGTTGACGAAACGAGCTCAAGTGATTTTGAGGCCAGTTACAAGCCAAAGACCGATTTGCTGAAAGCTATAGCAATATTTGCGGCAGCTGCAACAGGGACGGTGGCAATTAACCATTCATGGGTTGCTGCTAATCAGGATGTTGCCATGACACTGCTATTTGGAATAGGATATGCAGGCATTATTTTTGAAGAATCTCTGGCCTTCAACAAGAGTGGAGTAGGTTTGATAATGGCTGTATGCTTGTGGATAGTGAGAAGTATTGGTGCTCCTTCAACTGATATAGCTGTTGCAGAGTTACAACATGCATCTGCTGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACAATTGTAGAGATAGTTGATTCTCATCAAGGATTTAAGCTGGTCACTGACAATATAACTACTCGAAAGCCAAGAACACTCCTCTGGGTGGTTGGTTTTGTGACATTCTTCCTTAGTTCAATTCTTGACAACCTGACATCTACCATTGTCATGGTCTCTTTATTGCGAAAACTAGTGCCTCCCTCAGACTTCCGCAAGCTTTTAGGAGGAGTTGTTGTCATAGCTGCAAATGCTGGTGGTGCGTGGACTCCTATTGGTGATGTTACCACCACTATGTTATGGATACATGGTCAGATATCAACAGTGGAGACAATGAAGGGATTATTTATACCAGCAGTCGTTTCTCTTGCTGTTCCGCTGGCACTTTTGTCCCTTACAAGTGAAGCAAGTGGTGATGGACCAGACACATCCAGTGTTATGGCATCTGAACAGATGGCTCCCCGTGGACAGCTTGTTTTCTCGGTAGGCATCGGAGCTTTGATTTTTGTTCCAGTTTTCAAGTCCCTAACTGGTTTGCCTCCTTACATGGGTATGCTACTGGGACTTGGAGTCCTTTGGATTCTGACTGATGCAATCCACTATGGTGAATCGGAACGACAAAGGTTGAAAGTACCACAGGCTTTGTCACGGATTGACACTCAAGGAGCACTTTTCTTCCTTGGAATTCTTTTATCTGTTAGCAGCCTGGAGGCGGCAGGAATTCTTCGGGAATTAGCAAACTACCTGGATGCTCATATTCCCAATATTGAACTGATTGCAAGTTCAATAGGAATTGTCTCAGCAATTATAGACAATGTTCCACTGGTTGCTGCAGCTATGGGGATGTACGATGTCGCCTCTTTTCCCCAGGACTCTGAGTTTTGGCAGCTGGTTGCGTATTGTGCTGGTACTGGTGGATCCATGCTAGTTATTGGTTCTGCAGCCGGAGTTGCTTTTATGGGGATGGAAAAGGTGGACTTCTTCTGGTACTTTCGCAAGGTGAGTGGGTTTGCTTTTGCCGGTTATGCTGCTGGTATTGCAGCCTATTTAGCAGCTCAAAACCTCCACATCTCGATACCAACAACCGTAGCTCAGGTTCCTTTCCTTTCTGGATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006814 GO:0006820 GO:0006848 GO:0006950 GO:0006970 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009941 GO:0015075 GO:0015291 GO:0015297 GO:0015318 GO:0015672 GO:0015711 GO:0015718 GO:0015849 GO:0022804 GO:0022857 GO:0030001 GO:0031967 GO:0031975 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050833 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098656 GO:1901475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CitMHS

Protein Analysis

575

Amino Acids

61.0

Weight (kDa)

5.64

Isoelectric Point (pI)

38.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CitMHS	PF03600	151 - 491	8.6e-25	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49810 AT3G19490
fragaria_vesca	FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320
malus_domestica	MD05G1088200.v1.1
prunus_persica	Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1
pyrus_communis	pycom05g08760 pycom10g08240
rosa_chinensis	RchiOBHm_Chr6g0255461 RchiOBHm_Chr6g0255491 RchiOBHm_Chr6g0255511 RchiOBHm_Chr6g0255521
rosa_laevigata	RLG00000014834 RLG00000014835
rosa_multiflora	Rmu_sc0002360.1_g000008
rosa_roxburghii	Rroxscaffold_7G00209940 Rroxscaffold_7G00209960
rosa_rugosa	Rorug05G0559000 Rorug05G0559100 Rorug05G0559100
rosa_samantha	Rh6AG076700 Rh6AG077100 Rh6AG077200 Rh6BG069500 Rh6BG069800 Rh6CG068500 Rh6DG065300
rosa_wichuraiana	Rw6G006660 Rw6G006680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	64
AciI	CCGC	6 cut(s)	64, 67, 359, 823, 986, 1322
AclWI	GGATC	5 cut(s)	260, 265, 1521, 1534, 1716
AcsI	RAATTY	2 cut(s)	1293, 1329
AcuI	CTGAAG	2 cut(s)	186, 612
AfaI	GTAC	4 cut(s)	1242, 1457, 1519, 1598
AfiI	CCNNNNNNNGG	4 cut(s)	397, 718, 1157, 1321
AgsI	TTSAA	9 cut(s)	52, 467, 484, 552, 750, 1129, 1237, 1379, 1395
AhdI	GACNNNNNGTC	1 cut(s)	1178
AhlI	ACTAGT	1 cut(s)	802
AjnI	CCWGG	3 cut(s)	1314, 1353, 1476
AleI	CACNNNNGTG	1 cut(s)	1212
Alw21I	GWGCWC	3 cut(s)	296, 547, 1279
Alw26I	GTCTC	3 cut(s)	790, 932, 1411
AlwI	GGATC	5 cut(s)	260, 265, 1521, 1534, 1716
AoxI	GGCC	3 cut(s)	127, 309, 477
ApoI	RAATTY	2 cut(s)	1293, 1329
AspLEI	GCGC	1 cut(s)	25
AspS9I	GGNCC	2 cut(s)	128, 1028
AsuHPI	GGTGA	4 cut(s)	899, 1034, 1226, 1621
AvaII	GGWCC	1 cut(s)	1028
BamHI	GGATCC	2 cut(s)	1526, 1721
BanII	GRGCYC	1 cut(s)	296
Bbv12I	GWGCWC	3 cut(s)	296, 547, 1279
BccI	CCATC	3 cut(s)	1019, 1057, 1567
BciT130I	CCWGG	3 cut(s)	1316, 1355, 1478
BciVI	GTATCC	1 cut(s)	906
BcoDI	GTCTC	3 cut(s)	790, 932, 1411
BcuI	ACTAGT	1 cut(s)	802
BfaI	CTAG	2 cut(s)	803, 1535
BfmI	CTRYAG	3 cut(s)	345, 1440, 1548
BfuI	GTATCC	1 cut(s)	906
Bme1390I	CCNGG	3 cut(s)	1316, 1355, 1478
Bme18I	GGWCC	1 cut(s)	1028
BmeRI	GACNNNNNGTC	1 cut(s)	1178
BmgT120I	GGNCC	2 cut(s)	128, 1028
BmiI	GGNNCC	4 cut(s)	1068, 1528, 1707, 1723
BmrFI	CCNGG	3 cut(s)	1316, 1355, 1478
BmrI	ACTGGG	2 cut(s)	211, 1178
BmsI	GCATC	5 cut(s)	593, 1061, 1107, 1189, 1348
BmuI	ACTGGG	2 cut(s)	211, 1178
BpmI	CTGGAG	1 cut(s)	1337
Bpu10I	CCTNAGC	1 cut(s)	1701
BpuEI	CTTGAG	2 cut(s)	280, 1254
BsaAI	YACGTR	1 cut(s)	116
BsaBI	GATNNNNATC	1 cut(s)	654
BsaI	GGTCTC	1 cut(s)	790
BsaJI	CCNNGG	3 cut(s)	1072, 1288, 1476
BsaXI	ACNNNNNCTCC	4 cut(s)	828, 831, 858, 861
Bsc4I	CCNNNNNNNGG	4 cut(s)	397, 718, 1157, 1321
Bse118I	RCCGGY	1 cut(s)	1628
Bse1I	ACTGG	8 cut(s)	217, 312, 1041, 1121, 1144, 1173, 1437, 1525
Bse3DI	GCAATG	2 cut(s)	151, 633
Bse8I	GATNNNNATC	1 cut(s)	654
BseBI	CCWGG	3 cut(s)	1316, 1355, 1478
BseDI	CCNNGG	3 cut(s)	1072, 1288, 1476
BseGI	GGATG	5 cut(s)	421, 1037, 1363, 1458, 1578
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	4 cut(s)	397, 718, 1157, 1321
BseMI	GCAATG	2 cut(s)	151, 633
BseMII	CTCAG	7 cut(s)	92, 213, 224, 828, 1422, 1476, 1715
BseNI	ACTGG	8 cut(s)	217, 312, 1041, 1121, 1144, 1173, 1437, 1525
BseRI	GAGGAG	2 cut(s)	701, 852
BseYI	CCCAGC	1 cut(s)	139
Bsh1236I	CGCG	1 cut(s)	64
BshFI	GGCC	3 cut(s)	129, 311, 479
BsiHKAI	GWGCWC	3 cut(s)	296, 547, 1279
BsiSI	CCGG	2 cut(s)	1554, 1629
BslFI	GGGAC	6 cut(s)	22, 199, 388, 985, 1117, 1185
BslI	CCNNNNNNNGG	4 cut(s)	397, 718, 1157, 1321
BsmAI	GTCTC	3 cut(s)	790, 932, 1411
BsmFI	GGGAC	6 cut(s)	22, 199, 388, 985, 1117, 1185
BsnI	GGCC	3 cut(s)	129, 311, 479
Bso31I	GGTCTC	1 cut(s)	790
Bsp1286I	GDGCHC	3 cut(s)	296, 547, 1279
Bsp143I	GATC	4 cut(s)	257, 265, 1526, 1721
BspACI	CCGC	6 cut(s)	64, 67, 359, 823, 986, 1322
BspANI	GGCC	3 cut(s)	129, 311, 479
BspCNI	CTCAG	7 cut(s)	91, 214, 223, 827, 1421, 1477, 1714
BspFNI	CGCG	1 cut(s)	64
BspLI	GGNNCC	4 cut(s)	1068, 1528, 1707, 1723
BspMAI	CTGCAG	2 cut(s)	1444, 1552
BspPI	GGATC	5 cut(s)	260, 265, 1521, 1534, 1716
BspTNI	GGTCTC	1 cut(s)	790
BsrDI	GCAATG	2 cut(s)	151, 633
BsrFI	RCCGGY	1 cut(s)	1628
BsrI	ACTGG	8 cut(s)	217, 312, 1041, 1121, 1144, 1173, 1437, 1525
BssAI	RCCGGY	1 cut(s)	1628
BssECI	CCNNGG	3 cut(s)	1072, 1288, 1476
BssMI	GATC	4 cut(s)	257, 265, 1526, 1721
BssT1I	CCWWGG	1 cut(s)	1288
Bst2UI	CCWGG	3 cut(s)	1316, 1355, 1478
Bst4CI	ACNGT	4 cut(s)	36, 379, 934, 1696
Bst6I	CTCTTC	1 cut(s)	162
BstAPI	GCANNNNNTGC	1 cut(s)	356
BstBAI	YACGTR	1 cut(s)	116
BstC8I	GCNNGC	4 cut(s)	62, 454, 827, 990
BstDEI	CTNAG	8 cut(s)	78, 210, 222, 743, 814, 1408, 1485, 1701
BstDSI	CCRYGG	1 cut(s)	1072
BstF5I	GGATG	5 cut(s)	421, 1037, 1363, 1458, 1578
BstFNI	CGCG	1 cut(s)	64
BstHHI	GCGC	1 cut(s)	25
BstKTI	GATC	4 cut(s)	260, 268, 1529, 1724
BstMAI	GTCTC	3 cut(s)	790, 932, 1411
BstMBI	GATC	4 cut(s)	257, 265, 1526, 1721
BstMWI	GCNNNNNNNGC	9 cut(s)	356, 365, 860, 869, 1511, 1559, 1634, 1646, 1658
BstNI	CCWGG	3 cut(s)	1316, 1355, 1478
BstNSI	RCATGY	1 cut(s)	584
BstSCI	CCNGG	3 cut(s)	1314, 1353, 1476
BstSFI	CTRYAG	3 cut(s)	345, 1440, 1548
BstUI	CGCG	1 cut(s)	64
BstX2I	RGATCY	2 cut(s)	1526, 1721
BstXI	CCANNNNNNTGG	2 cut(s)	781, 1048
BstYI	RGATCY	2 cut(s)	1526, 1721
BsuI	GTATCC	1 cut(s)	906
BsuRI	GGCC	3 cut(s)	129, 311, 479
BtgI	CCRYGG	1 cut(s)	1072
BtsCI	GGATG	5 cut(s)	421, 1037, 1363, 1458, 1578
BtsI	GCAGTG	1 cut(s)	428
BtsIMutI	CAGTG	6 cut(s)	428, 604, 675, 939, 1048, 1430
Cac8I	GCNNGC	4 cut(s)	62, 454, 827, 990
CfoI	GCGC	1 cut(s)	25
Cfr10I	RCCGGY	1 cut(s)	1628
Cfr13I	GGNCC	2 cut(s)	128, 1028
Csp6I	GTAC	4 cut(s)	1241, 1456, 1518, 1597
CspCI	CAANNNNNGTGG	6 cut(s)	472, 507, 1233, 1268, 1594, 1629
CviAII	CATG	8 cut(s)	261, 396, 424, 581, 781, 917, 1156, 1531
CviQI	GTAC	4 cut(s)	1241, 1456, 1518, 1597
DdeI	CTNAG	8 cut(s)	78, 210, 222, 743, 814, 1408, 1485, 1701
DpnI	GATC	4 cut(s)	259, 267, 1528, 1723
DpnII	GATC	4 cut(s)	257, 265, 1526, 1721
DriI	GACNNNNNGTC	1 cut(s)	1178
Eam1104I	CTCTTC	1 cut(s)	162
Eam1105I	GACNNNNNGTC	1 cut(s)	1178
EarI	CTCTTC	1 cut(s)	162
Ecl136II	GAGCTC	1 cut(s)	294
Eco130I	CCWWGG	1 cut(s)	1288
Eco24I	GRGCYC	1 cut(s)	296
Eco31I	GGTCTC	1 cut(s)	790
Eco32I	GATATC	1 cut(s)	927
Eco47I	GGWCC	1 cut(s)	1028
Eco53kI	GAGCTC	1 cut(s)	294
Eco57I	CTGAAG	2 cut(s)	186, 612
EcoICRI	GAGCTC	1 cut(s)	294
EcoRI	GAATTC	2 cut(s)	1293, 1329
EcoRII	CCWGG	3 cut(s)	1314, 1353, 1476
EcoRV	GATATC	1 cut(s)	927
EcoT14I	CCWWGG	1 cut(s)	1288
EcoT22I	ATGCAT	1 cut(s)	586
EcoT38I	GRGCYC	1 cut(s)	296
ErhI	CCWWGG	1 cut(s)	1288
FaeI	CATG	8 cut(s)	264, 399, 427, 584, 784, 920, 1159, 1534
FalI	AAGNNNNNCTT	4 cut(s)	1263, 1295, 1571, 1603
FaqI	GGGAC	6 cut(s)	22, 199, 388, 985, 1117, 1185
FatI	CATG	8 cut(s)	260, 395, 423, 580, 780, 916, 1155, 1530
FauNDI	CATATG	1 cut(s)	27
FokI	GGATG	5 cut(s)	428, 1024, 1370, 1465, 1585
FriOI	GRGCYC	1 cut(s)	296
FspBI	CTAG	2 cut(s)	803, 1535
GlaI	GCGC	1 cut(s)	24
GsaI	CCCAGC	1 cut(s)	143
GsuI	CTGGAG	1 cut(s)	1337
HaeIII	GGCC	3 cut(s)	129, 311, 479
HapII	CCGG	2 cut(s)	1554, 1629
HhaI	GCGC	1 cut(s)	25
Hin1II	CATG	8 cut(s)	264, 399, 427, 584, 784, 920, 1159, 1534
Hin6I	GCGC	1 cut(s)	23
HinP1I	GCGC	1 cut(s)	23
HincII	GTYRAC	2 cut(s)	243, 283
HindII	GTYRAC	2 cut(s)	243, 283
HindIII	AAGCTT	2 cut(s)	88, 827
HinfI	GANTC	8 cut(s)	120, 470, 650, 877, 1179, 1189, 1217, 1481
HpaII	CCGG	2 cut(s)	1554, 1629
HphI	GGTGA	4 cut(s)	899, 1034, 1226, 1621
Hpy166II	GTNNAC	5 cut(s)	243, 283, 876, 1076, 1585
Hpy188III	TCNNGA	8 cut(s)	52, 255, 413, 755, 1337, 1681, 1719, 1725
Hpy8I	GTNNAC	5 cut(s)	243, 283, 876, 1076, 1585
HpyAV	CCTTC	3 cut(s)	490, 558, 940
HpyCH4III	ACNGT	4 cut(s)	36, 379, 934, 1696
HpyCH4IV	ACGT	1 cut(s)	115
HpyF10VI	GCNNNNNNNGC	9 cut(s)	356, 365, 860, 869, 1511, 1559, 1634, 1646, 1658
HpyF3I	CTNAG	8 cut(s)	78, 210, 222, 743, 814, 1408, 1485, 1701
HpySE526I	ACGT	1 cut(s)	115
Hsp92II	CATG	8 cut(s)	264, 399, 427, 584, 784, 920, 1159, 1534
HspAI	GCGC	1 cut(s)	23
Kzo9I	GATC	4 cut(s)	257, 265, 1526, 1721
LmnI	GCTCC	5 cut(s)	100, 550, 1072, 1103, 1274
LweI	GCATC	5 cut(s)	593, 1061, 1107, 1189, 1348
MaeI	CTAG	2 cut(s)	803, 1535
MaeII	ACGT	1 cut(s)	115
MaeIII	GTNAC	6 cut(s)	314, 573, 673, 730, 892, 1254
MalI	GATC	4 cut(s)	259, 267, 1528, 1723
MboI	GATC	4 cut(s)	257, 265, 1526, 1721
MboII	GAAGA	6 cut(s)	179, 479, 730, 1276, 1325, 1582
MfeI	CAATTG	1 cut(s)	633
MflI	RGATCY	2 cut(s)	1526, 1721
MhlI	GDGCHC	3 cut(s)	296, 547, 1279
MluCI	AATT	9 cut(s)	47, 384, 633, 750, 1293, 1329, 1340, 1401, 1413
MlyI	GAGTC	3 cut(s)	871, 1188, 1475
Mph1103I	ATGCAT	1 cut(s)	586
MseI	TTAA	2 cut(s)	387, 666
MslI	CAYNNNNRTG	4 cut(s)	779, 902, 1160, 1212
MspA1I	CMGCKG	4 cut(s)	199, 365, 988, 1498
MspI	CCGG	2 cut(s)	1554, 1629
MspR9I	CCNGG	3 cut(s)	1316, 1355, 1478
MunI	CAATTG	1 cut(s)	633
MvaI	CCWGG	3 cut(s)	1316, 1355, 1478
MvnI	CGCG	1 cut(s)	64
MwoI	GCNNNNNNNGC	9 cut(s)	356, 365, 860, 869, 1511, 1559, 1634, 1646, 1658
NdeI	CATATG	1 cut(s)	27
NdeII	GATC	4 cut(s)	257, 265, 1526, 1721
NlaIII	CATG	8 cut(s)	264, 399, 427, 584, 784, 920, 1159, 1534
NlaIV	GGNNCC	4 cut(s)	1068, 1528, 1707, 1723
NmuCI	GTSAC	3 cut(s)	673, 730, 1254
NsiI	ATGCAT	1 cut(s)	586
NspI	RCATGY	1 cut(s)	584
OliI	CACNNNNGTG	1 cut(s)	1212
PfeI	GAWTC	5 cut(s)	120, 470, 650, 1189, 1217
PleI	GAGTC	3 cut(s)	871, 1187, 1475
PpsI	GAGTC	3 cut(s)	871, 1187, 1475
Ppu21I	YACGTR	1 cut(s)	116
Psp124BI	GAGCTC	1 cut(s)	296
Psp6I	CCWGG	3 cut(s)	1314, 1353, 1476
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	3 cut(s)	1314, 1353, 1476
PspN4I	GGNNCC	4 cut(s)	1068, 1528, 1707, 1723
PspPI	GGNCC	2 cut(s)	128, 1028
PsrI	GAACNNNNNNTAC	2 cut(s)	1689, 1721
PstI	CTGCAG	2 cut(s)	1444, 1552
PsuI	RGATCY	2 cut(s)	1526, 1721
PvuII	CAGCTG	3 cut(s)	199, 365, 1498
RsaI	GTAC	4 cut(s)	1242, 1457, 1519, 1598
RsaNI	GTAC	4 cut(s)	1241, 1456, 1518, 1597
RseI	CAYNNNNRTG	4 cut(s)	779, 902, 1160, 1212
SacI	GAGCTC	1 cut(s)	296
SaqAI	TTAA	2 cut(s)	387, 666
Sau3AI	GATC	4 cut(s)	257, 265, 1526, 1721
Sau96I	GGNCC	2 cut(s)	128, 1028
SchI	GAGTC	3 cut(s)	871, 1188, 1475
ScrFI	CCNGG	3 cut(s)	1316, 1355, 1478
SduI	GDGCHC	3 cut(s)	296, 547, 1279
SfaNI	GCATC	5 cut(s)	593, 1061, 1107, 1189, 1348
SfcI	CTRYAG	3 cut(s)	345, 1440, 1548
SinI	GGWCC	1 cut(s)	1028
SmiMI	CAYNNNNRTG	4 cut(s)	779, 902, 1160, 1212
SmlI	CTYRAG	2 cut(s)	295, 1269
SmoI	CTYRAG	2 cut(s)	295, 1269
SpeI	ACTAGT	1 cut(s)	802
Sse9I	AATT	9 cut(s)	47, 384, 633, 750, 1293, 1329, 1340, 1401, 1413
SsiI	CCGC	6 cut(s)	64, 67, 359, 823, 986, 1322
SspI	AATATT	2 cut(s)	354, 1375
SspMI	CTAG	2 cut(s)	803, 1535
SstI	GAGCTC	1 cut(s)	296
StyD4I	CCNGG	3 cut(s)	1314, 1353, 1476
StyI	CCWWGG	1 cut(s)	1288
TaaI	ACNGT	4 cut(s)	36, 379, 934, 1696
TaiI	ACGT	1 cut(s)	118
TaqI	TCGA	2 cut(s)	694, 1682
TaqII	GACCGA	1 cut(s)	344
TasI	AATT	9 cut(s)	47, 384, 633, 750, 1293, 1329, 1340, 1401, 1413
TauI	GCSGC	3 cut(s)	67, 362, 1325
TfiI	GAWTC	5 cut(s)	120, 470, 650, 1189, 1217
Tru1I	TTAA	2 cut(s)	387, 666
Tru9I	TTAA	2 cut(s)	387, 666
TscAI	CASTG	6 cut(s)	435, 604, 682, 939, 1048, 1437
TseFI	GTSAC	3 cut(s)	673, 730, 1254
Tsp45I	GTSAC	3 cut(s)	673, 730, 1254
TspDTI	ATGAA	2 cut(s)	384, 959
TspGWI	ACGGA	1 cut(s)	1273
TspRI	CASTG	6 cut(s)	435, 604, 682, 939, 1048, 1437
VpaK11BI	GGWCC	1 cut(s)	1028
XapI	RAATTY	2 cut(s)	1293, 1329
XceI	RCATGY	1 cut(s)	584
XspI	CTAG	2 cut(s)	803, 1535
Zsp2I	ATGCAT	1 cut(s)	586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.