Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0003147

Physical Location & Seq

Genomic Coordinates Forward (+)

60234701 .. 60239551

Gene Structure 4851 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00209960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGCTTCCCTCTCATTTGGGGCCCATATGCCCCGGTCTCACCACCAATTCAAGAAAAGCTCGCGGCGGTTTCTCTCTCAGACCCAAAGCTTAGCTCCTTTTGGTTCGTCTTTGCGTGGATTCAGAGGCCCAAGATTGCTGGGCAATGGAATGTTGGTCAGAGCTGAAGAGAAAGCCAGAGGTTCGGGTCAGCCGCCCAAAGCTCAGTCCCAGTCTGAGAAAGAGTTGCAGGAGTTGACACCAAGTTCTGGATCATGTGATCCTTTATGTTCGGTTGACGAAACGAGCTCAAGTGATTTTGAGGCCAGTTACAAGCCAAAGACTGATTTGCTGAAAGCTATAGCAATATTTGCGGCAGCTGCAACAGGGACGGTGGCAATTAACCACTCATGGGTTGCTGCTAATCAGGATGTTGCCATGGCACTGCTATTTGGAATAGGATATGCGGGCATTATTTTTGAAGAATCTCTGGCCTTCAACAAGAGTGGAGTAGATCCTTTTCCTGCAACTAATTATGATTTTTGGCAGGCTCCTTCAACTGATATAGCTGTTGCAGAGTTACAACATGCATCTGCTGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACAATTGTAGAGATAGTTGATTCTCATCAAGGATTTAAGCTGGTCACTGACAATATAACTACTCGAAAGCCAAGAACACTCCTCTGGGTGGTTGGTTTTGTGACTTTCTTCCTTAGTTCAATTCTTGACAACCTGACGTCTACCATTGTCATGGTCTCTTTATTGCGAAAACTAGTGCCTCCCTCAGACTTCCGCAAGCTTTTAGGAGGAGTTGTTGTCATAGCTGCAAATGCTGGTGGTGCATGGACTCCTATTGGTGATGTTACCACCACTATGTTATGGATACATGGTCAGATATCAACAGTGGAGACAATGAAGGGATTATTTATACCAGCAGTCGTTTCTCTTGCTGTTCCGCTGGCACTTTTGTCCCTTACAAGTGAAGCAAGTGGTGATGGACCAGACACATCCAATGTTATGGCATCCGAACAGATGGCTCCCCGGGGACAGCTTGTTTTCTCTGTTGGCATTGGAGCTTTGATTTTTGTTCCGGTTTTCAAGTCCCTAACTGGTTTGCCTCCTTACATGGGTATGCTGCTGGGACTTGGAGTCCTTTGGATTCTGACTGATGCAATCCACTATGGTGAATCAGAAAGACAAAGGTTGAAAGTACCACAGGCTTTGTCACGGATTGACACTCAAGGAGCACTTTTCTTCCTTGGAATTCTTTTATCTGTTAGCAGCCTGGAGGCGGCAGGAATTCTTCGGGAATTAGCAAACTACCTGGATGCTCATATTCCCAATATTGAACTGATTGCAAGTTCAATAGGAATTGTCTCAGCAATTATAGACAATGTTCCACTGGTTGCTGCAGCTATGGGGATGTACGATGTCGCCTCTTTTCCCCAGGACTCTGAGTTTTGGCAGCTGGTTGCATATTGTGCCGGTACTGGTGGATCCATGCTAGTTATTGGTTCTGCCGCCGGAGTTGCTTTTATGGGGATGGAAAAGGTGGACTTCTTCTGGTACTTTCGCAAGGTGAGTGGGTTTGCTTTTGCCGGTTATGCTGCTGGTATTGCAGCCTATTTAGCAGCTCAAAACCTCCACATCTCGATACCAACAACCGTAGCTCAGGTTCCTTTCCTTTCTGGATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006814 GO:0006820 GO:0006848 GO:0006950 GO:0006970 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009941 GO:0015075 GO:0015291 GO:0015297 GO:0015318 GO:0015672 GO:0015711 GO:0015718 GO:0015849 GO:0022804 GO:0022857 GO:0030001 GO:0031967 GO:0031975 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050833 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098656 GO:1901475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CitMHS

Protein Analysis

570

Amino Acids

60.69

Weight (kDa)

5.62

Isoelectric Point (pI)

37.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CitMHS	PF03600	195 - 486	4.2e-24	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49810 AT3G19490
fragaria_vesca	FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320
malus_domestica	MD05G1088200.v1.1
prunus_persica	Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1
pyrus_communis	pycom05g08760 pycom10g08240
rosa_chinensis	RchiOBHm_Chr6g0255461 RchiOBHm_Chr6g0255491 RchiOBHm_Chr6g0255511 RchiOBHm_Chr6g0255521
rosa_laevigata	RLG00000014834 RLG00000014835
rosa_multiflora	Rmu_sc0002360.1_g000008
rosa_roxburghii	Rroxscaffold_7G00209940 Rroxscaffold_7G00209960
rosa_rugosa	Rorug05G0559000 Rorug05G0559100 Rorug05G0559100
rosa_samantha	Rh6AG076700 Rh6AG077100 Rh6AG077200 Rh6BG069500 Rh6BG069800 Rh6CG068500 Rh6DG065300
rosa_wichuraiana	Rw6G006660 Rw6G006680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	755
AccB7I	CCANNNNNTGG	1 cut(s)	248
AccI	GTMKAC	1 cut(s)	755
AccII	CGCG	1 cut(s)	64
AciI	CCGC	9 cut(s)	64, 67, 194, 353, 446, 808, 971, 1307, 1536
AclWI	GGATC	6 cut(s)	254, 259, 488, 1506, 1519, 1701
AcsI	RAATTY	2 cut(s)	1278, 1314
AcuI	CTGAAG	2 cut(s)	186, 597
AcyI	GRCGYC	1 cut(s)	752
AfaI	GTAC	4 cut(s)	1227, 1442, 1504, 1583
AfiI	CCNNNNNNNGG	5 cut(s)	248, 391, 703, 1142, 1306
AgsI	TTSAA	9 cut(s)	52, 461, 478, 537, 735, 1114, 1222, 1364, 1380
AhdI	GACNNNNNGTC	1 cut(s)	1163
AhlI	ACTAGT	1 cut(s)	787
AjnI	CCWGG	3 cut(s)	1299, 1338, 1461
AleI	CACNNNNGTG	1 cut(s)	1197
Alw21I	GWGCWC	2 cut(s)	290, 1264
Alw26I	GTCTC	4 cut(s)	42, 775, 917, 1396
AlwI	GGATC	6 cut(s)	254, 259, 488, 1506, 1519, 1701
Ama87I	CYCGRG	1 cut(s)	1056
AoxI	GGCC	4 cut(s)	21, 127, 303, 471
ApaI	GGGCCC	1 cut(s)	25
ApoI	RAATTY	2 cut(s)	1278, 1314
AspS9I	GGNCC	4 cut(s)	21, 22, 128, 1013
AsuC2I	CCSGG	3 cut(s)	34, 1057, 1058
AsuHPI	GGTGA	5 cut(s)	32, 884, 1019, 1211, 1606
AvaI	CYCGRG	1 cut(s)	1056
AvaII	GGWCC	1 cut(s)	1013
BaeGI	GKGCMC	1 cut(s)	25
BamHI	GGATCC	2 cut(s)	1511, 1706
BanII	GRGCYC	2 cut(s)	25, 290
Bbv12I	GWGCWC	2 cut(s)	290, 1264
BccI	CCATC	3 cut(s)	1004, 1042, 1552
BciT130I	CCWGG	3 cut(s)	1301, 1340, 1463
BciVI	GTATCC	1 cut(s)	891
BcnI	CCSGG	3 cut(s)	34, 1057, 1058
BcoDI	GTCTC	4 cut(s)	42, 775, 917, 1396
BcuI	ACTAGT	1 cut(s)	787
BfaI	CTAG	2 cut(s)	788, 1520
BfmI	CTRYAG	2 cut(s)	339, 1425
BfuI	GTATCC	1 cut(s)	891
BlpI	GCTNAGC	1 cut(s)	91
Bme1390I	CCNGG	6 cut(s)	34, 1057, 1058, 1301, 1340, 1463
Bme18I	GGWCC	1 cut(s)	1013
BmeRI	GACNNNNNGTC	1 cut(s)	1163
BmeT110I	CYCGRG	1 cut(s)	1056
BmgT120I	GGNCC	4 cut(s)	21, 22, 128, 1013
BmiI	GGNNCC	7 cut(s)	22, 23, 531, 1053, 1513, 1692, 1708
BmrFI	CCNGG	6 cut(s)	34, 1057, 1058, 1301, 1340, 1463
BmrI	ACTGGG	1 cut(s)	205
BmsI	GCATC	4 cut(s)	578, 1046, 1174, 1333
BmuI	ACTGGG	1 cut(s)	205
BpmI	CTGGAG	1 cut(s)	1322
Bpu10I	CCTNAGC	1 cut(s)	1686
Bpu1102I	GCTNAGC	1 cut(s)	91
BpuEI	CTTGAG	2 cut(s)	274, 1239
BpuMI	CCSGG	3 cut(s)	34, 1057, 1058
BsaBI	GATNNNNATC	1 cut(s)	639
BsaHI	GRCGYC	1 cut(s)	752
BsaI	GGTCTC	2 cut(s)	42, 775
BsaJI	CCNNGG	7 cut(s)	32, 417, 1055, 1056, 1057, 1273, 1461
BsaWI	WCCGGW	1 cut(s)	1105
BsaXI	ACNNNNNCTCC	4 cut(s)	813, 816, 843, 846
Bsc4I	CCNNNNNNNGG	5 cut(s)	248, 391, 703, 1142, 1306
Bse118I	RCCGGY	2 cut(s)	1499, 1613
Bse1I	ACTGG	5 cut(s)	211, 306, 1129, 1422, 1510
Bse3DI	GCAATG	2 cut(s)	151, 618
Bse8I	GATNNNNATC	1 cut(s)	639
BseBI	CCWGG	3 cut(s)	1301, 1340, 1463
BseDI	CCNNGG	7 cut(s)	32, 417, 1055, 1056, 1057, 1273, 1461
BseGI	GGATG	6 cut(s)	415, 1022, 1037, 1348, 1443, 1563
BseJI	GATNNNNATC	1 cut(s)	639
BseLI	CCNNNNNNNGG	5 cut(s)	248, 391, 703, 1142, 1306
BseMI	GCAATG	2 cut(s)	151, 618
BseMII	CTCAG	7 cut(s)	92, 207, 218, 813, 1407, 1461, 1700
BseNI	ACTGG	5 cut(s)	211, 306, 1129, 1422, 1510
BseRI	GAGGAG	2 cut(s)	686, 837
BseSI	GKGCMC	1 cut(s)	25
BseYI	CCCAGC	2 cut(s)	139, 1153
Bsh1236I	CGCG	1 cut(s)	64
BshFI	GGCC	4 cut(s)	23, 129, 305, 473
BsiHKAI	GWGCWC	2 cut(s)	290, 1264
BsiHKCI	CYCGRG	1 cut(s)	1056
BsiSI	CCGG	6 cut(s)	34, 1057, 1106, 1500, 1539, 1614
BslFI	GGGAC	6 cut(s)	193, 382, 970, 1074, 1102, 1170
BslI	CCNNNNNNNGG	5 cut(s)	248, 391, 703, 1142, 1306
BsmAI	GTCTC	4 cut(s)	42, 775, 917, 1396
BsmFI	GGGAC	6 cut(s)	193, 382, 970, 1074, 1102, 1170
BsnI	GGCC	4 cut(s)	23, 129, 305, 473
Bso31I	GGTCTC	2 cut(s)	42, 775
BsoBI	CYCGRG	1 cut(s)	1056
Bsp120I	GGGCCC	1 cut(s)	21
Bsp1286I	GDGCHC	3 cut(s)	25, 290, 1264
Bsp143I	GATC	5 cut(s)	251, 259, 493, 1511, 1706
Bsp1720I	GCTNAGC	1 cut(s)	91
Bsp19I	CCATGG	1 cut(s)	417
BspACI	CCGC	9 cut(s)	64, 67, 194, 353, 446, 808, 971, 1307, 1536
BspANI	GGCC	4 cut(s)	23, 129, 305, 473
BspCNI	CTCAG	7 cut(s)	91, 208, 217, 812, 1406, 1462, 1699
BspFNI	CGCG	1 cut(s)	64
BspLI	GGNNCC	7 cut(s)	22, 23, 531, 1053, 1513, 1692, 1708
BspMAI	CTGCAG	1 cut(s)	1429
BspPI	GGATC	6 cut(s)	254, 259, 488, 1506, 1519, 1701
BspTNI	GGTCTC	2 cut(s)	42, 775
BsrDI	GCAATG	2 cut(s)	151, 618
BsrFI	RCCGGY	2 cut(s)	1499, 1613
BsrI	ACTGG	5 cut(s)	211, 306, 1129, 1422, 1510
BssAI	RCCGGY	2 cut(s)	1499, 1613
BssECI	CCNNGG	7 cut(s)	32, 417, 1055, 1056, 1057, 1273, 1461
BssMI	GATC	5 cut(s)	251, 259, 493, 1511, 1706
BssNI	GRCGYC	1 cut(s)	752
BssT1I	CCWWGG	2 cut(s)	417, 1273
Bst2UI	CCWGG	3 cut(s)	1301, 1340, 1463
Bst4CI	ACNGT	3 cut(s)	373, 919, 1681
Bst6I	CTCTTC	1 cut(s)	162
BstACI	GRCGYC	1 cut(s)	752
BstAPI	GCANNNNNTGC	2 cut(s)	350, 1496
BstC8I	GCNNGC	5 cut(s)	62, 448, 528, 812, 975
BstDEI	CTNAG	9 cut(s)	78, 91, 204, 216, 728, 799, 1393, 1470, 1686
BstDSI	CCRYGG	1 cut(s)	417
BstF5I	GGATG	6 cut(s)	415, 1022, 1037, 1348, 1443, 1563
BstFNI	CGCG	1 cut(s)	64
BstKTI	GATC	5 cut(s)	254, 262, 496, 1514, 1709
BstMAI	GTCTC	4 cut(s)	42, 775, 917, 1396
BstMBI	GATC	5 cut(s)	251, 259, 493, 1511, 1706
BstMWI	GCNNNNNNNGC	9 cut(s)	350, 359, 845, 854, 1496, 1544, 1619, 1631, 1643
BstNI	CCWGG	3 cut(s)	1301, 1340, 1463
BstNSI	RCATGY	1 cut(s)	569
BstSCI	CCNGG	6 cut(s)	32, 1055, 1056, 1299, 1338, 1461
BstSFI	CTRYAG	2 cut(s)	339, 1425
BstSLI	GKGCMC	1 cut(s)	25
BstUI	CGCG	1 cut(s)	64
BstX2I	RGATCY	3 cut(s)	493, 1511, 1706
BstXI	CCANNNNNNTGG	2 cut(s)	766, 1033
BstYI	RGATCY	3 cut(s)	493, 1511, 1706
BsuI	GTATCC	1 cut(s)	891
BsuRI	GGCC	4 cut(s)	23, 129, 305, 473
BtgI	CCRYGG	1 cut(s)	417
BtsCI	GGATG	6 cut(s)	415, 1022, 1037, 1348, 1443, 1563
BtsI	GCAGTG	1 cut(s)	422
BtsIMutI	CAGTG	5 cut(s)	422, 589, 660, 924, 1415
Cac8I	GCNNGC	5 cut(s)	62, 448, 528, 812, 975
Cfr10I	RCCGGY	2 cut(s)	1499, 1613
Cfr13I	GGNCC	4 cut(s)	21, 22, 128, 1013
Cfr9I	CCCGGG	1 cut(s)	1056
Csp6I	GTAC	4 cut(s)	1226, 1441, 1503, 1582
CspCI	CAANNNNNGTGG	6 cut(s)	466, 501, 1218, 1253, 1579, 1614
CviAII	CATG	9 cut(s)	255, 390, 418, 566, 766, 858, 902, 1141, 1516
CviQI	GTAC	4 cut(s)	1226, 1441, 1503, 1582
DdeI	CTNAG	9 cut(s)	78, 91, 204, 216, 728, 799, 1393, 1470, 1686
DpnI	GATC	5 cut(s)	253, 261, 495, 1513, 1708
DpnII	GATC	5 cut(s)	251, 259, 493, 1511, 1706
DriI	GACNNNNNGTC	1 cut(s)	1163
Eam1104I	CTCTTC	1 cut(s)	162
Eam1105I	GACNNNNNGTC	1 cut(s)	1163
EarI	CTCTTC	1 cut(s)	162
Ecl136II	GAGCTC	1 cut(s)	288
Eco130I	CCWWGG	2 cut(s)	417, 1273
Eco24I	GRGCYC	2 cut(s)	25, 290
Eco31I	GGTCTC	2 cut(s)	42, 775
Eco32I	GATATC	1 cut(s)	912
Eco47I	GGWCC	1 cut(s)	1013
Eco53kI	GAGCTC	1 cut(s)	288
Eco57I	CTGAAG	2 cut(s)	186, 597
Eco88I	CYCGRG	1 cut(s)	1056
EcoICRI	GAGCTC	1 cut(s)	288
EcoO109I	RGGNCCY	1 cut(s)	21
EcoRI	GAATTC	2 cut(s)	1278, 1314
EcoRII	CCWGG	3 cut(s)	1299, 1338, 1461
EcoRV	GATATC	1 cut(s)	912
EcoT14I	CCWWGG	2 cut(s)	417, 1273
EcoT22I	ATGCAT	1 cut(s)	571
EcoT38I	GRGCYC	2 cut(s)	25, 290
ErhI	CCWWGG	2 cut(s)	417, 1273
FaeI	CATG	9 cut(s)	258, 393, 421, 569, 769, 861, 905, 1144, 1519
FalI	AAGNNNNNCTT	4 cut(s)	1248, 1280, 1556, 1588
FaqI	GGGAC	6 cut(s)	193, 382, 970, 1074, 1102, 1170
FatI	CATG	9 cut(s)	254, 389, 417, 565, 765, 857, 901, 1140, 1515
FauI	CCCGC	1 cut(s)	439
FauNDI	CATATG	1 cut(s)	27
FblI	GTMKAC	1 cut(s)	755
FokI	GGATG	6 cut(s)	422, 1009, 1024, 1355, 1450, 1570
FriOI	GRGCYC	2 cut(s)	25, 290
FspBI	CTAG	2 cut(s)	788, 1520
GsaI	CCCAGC	2 cut(s)	143, 1157
GsuI	CTGGAG	1 cut(s)	1322
HaeIII	GGCC	4 cut(s)	23, 129, 305, 473
HapII	CCGG	6 cut(s)	34, 1057, 1106, 1500, 1539, 1614
Hin1I	GRCGYC	1 cut(s)	752
Hin1II	CATG	9 cut(s)	258, 393, 421, 569, 769, 861, 905, 1144, 1519
HincII	GTYRAC	2 cut(s)	237, 277
HindII	GTYRAC	2 cut(s)	237, 277
HindIII	AAGCTT	2 cut(s)	88, 812
HinfI	GANTC	8 cut(s)	120, 464, 635, 862, 1164, 1174, 1202, 1466
HpaII	CCGG	6 cut(s)	34, 1057, 1106, 1500, 1539, 1614
HphI	GGTGA	5 cut(s)	32, 884, 1019, 1211, 1606
Hpy166II	GTNNAC	4 cut(s)	237, 277, 756, 1570
Hpy188III	TCNNGA	8 cut(s)	52, 249, 407, 740, 1322, 1666, 1704, 1710
Hpy8I	GTNNAC	4 cut(s)	237, 277, 756, 1570
HpyAV	CCTTC	3 cut(s)	484, 543, 925
HpyCH4III	ACNGT	3 cut(s)	373, 919, 1681
HpyCH4IV	ACGT	1 cut(s)	752
HpyF10VI	GCNNNNNNNGC	9 cut(s)	350, 359, 845, 854, 1496, 1544, 1619, 1631, 1643
HpyF3I	CTNAG	9 cut(s)	78, 91, 204, 216, 728, 799, 1393, 1470, 1686
HpySE526I	ACGT	1 cut(s)	752
Hsp92I	GRCGYC	1 cut(s)	752
Hsp92II	CATG	9 cut(s)	258, 393, 421, 569, 769, 861, 905, 1144, 1519
Kzo9I	GATC	5 cut(s)	251, 259, 493, 1511, 1706
LmnI	GCTCC	5 cut(s)	100, 535, 1057, 1088, 1259
LweI	GCATC	4 cut(s)	578, 1046, 1174, 1333
MaeI	CTAG	2 cut(s)	788, 1520
MaeII	ACGT	1 cut(s)	752
MaeIII	GTNAC	6 cut(s)	308, 558, 658, 715, 877, 1239
MalI	GATC	5 cut(s)	253, 261, 495, 1513, 1708
MboI	GATC	5 cut(s)	251, 259, 493, 1511, 1706
MboII	GAAGA	6 cut(s)	179, 473, 715, 1261, 1310, 1567
MfeI	CAATTG	1 cut(s)	618
MflI	RGATCY	3 cut(s)	493, 1511, 1706
MhlI	GDGCHC	3 cut(s)	25, 290, 1264
MlyI	GAGTC	3 cut(s)	856, 1173, 1460
Mph1103I	ATGCAT	1 cut(s)	571
MseI	TTAA	2 cut(s)	381, 651
MslI	CAYNNNNRTG	4 cut(s)	764, 887, 1145, 1197
MspA1I	CMGCKG	3 cut(s)	359, 973, 1483
MspI	CCGG	6 cut(s)	34, 1057, 1106, 1500, 1539, 1614
MspR9I	CCNGG	6 cut(s)	34, 1057, 1058, 1301, 1340, 1463
MunI	CAATTG	1 cut(s)	618
MvaI	CCWGG	3 cut(s)	1301, 1340, 1463
MvnI	CGCG	1 cut(s)	64
MwoI	GCNNNNNNNGC	9 cut(s)	350, 359, 845, 854, 1496, 1544, 1619, 1631, 1643
NciI	CCSGG	3 cut(s)	34, 1057, 1058
NcoI	CCATGG	1 cut(s)	417
NdeI	CATATG	1 cut(s)	27
NdeII	GATC	5 cut(s)	251, 259, 493, 1511, 1706
NlaIII	CATG	9 cut(s)	258, 393, 421, 569, 769, 861, 905, 1144, 1519
NlaIV	GGNNCC	7 cut(s)	22, 23, 531, 1053, 1513, 1692, 1708
NmuCI	GTSAC	3 cut(s)	658, 715, 1239
NsiI	ATGCAT	1 cut(s)	571
NspI	RCATGY	1 cut(s)	569
OliI	CACNNNNGTG	1 cut(s)	1197
PfeI	GAWTC	5 cut(s)	120, 464, 635, 1174, 1202
PflMI	CCANNNNNTGG	1 cut(s)	248
PleI	GAGTC	3 cut(s)	856, 1172, 1460
PpsI	GAGTC	3 cut(s)	856, 1172, 1460
Psp124BI	GAGCTC	1 cut(s)	290
Psp6I	CCWGG	3 cut(s)	1299, 1338, 1461
PspFI	CCCAGC	2 cut(s)	139, 1153
PspGI	CCWGG	3 cut(s)	1299, 1338, 1461
PspN4I	GGNNCC	7 cut(s)	22, 23, 531, 1053, 1513, 1692, 1708
PspOMI	GGGCCC	1 cut(s)	21
PspPI	GGNCC	4 cut(s)	21, 22, 128, 1013
PsrI	GAACNNNNNNTAC	2 cut(s)	1674, 1706
PstI	CTGCAG	1 cut(s)	1429
PsuI	RGATCY	3 cut(s)	493, 1511, 1706
PvuII	CAGCTG	2 cut(s)	359, 1483
RsaI	GTAC	4 cut(s)	1227, 1442, 1504, 1583
RsaNI	GTAC	4 cut(s)	1226, 1441, 1503, 1582
RseI	CAYNNNNRTG	4 cut(s)	764, 887, 1145, 1197
SacI	GAGCTC	1 cut(s)	290
SaqAI	TTAA	2 cut(s)	381, 651
Sau3AI	GATC	5 cut(s)	251, 259, 493, 1511, 1706
Sau96I	GGNCC	4 cut(s)	21, 22, 128, 1013
SchI	GAGTC	3 cut(s)	856, 1173, 1460
ScrFI	CCNGG	6 cut(s)	34, 1057, 1058, 1301, 1340, 1463
SduI	GDGCHC	3 cut(s)	25, 290, 1264
SfaNI	GCATC	4 cut(s)	578, 1046, 1174, 1333
SfcI	CTRYAG	2 cut(s)	339, 1425
SinI	GGWCC	1 cut(s)	1013
SmaI	CCCGGG	1 cut(s)	1058
SmiMI	CAYNNNNRTG	4 cut(s)	764, 887, 1145, 1197
SmlI	CTYRAG	2 cut(s)	289, 1254
SmoI	CTYRAG	2 cut(s)	289, 1254
SpeI	ACTAGT	1 cut(s)	787
SsiI	CCGC	9 cut(s)	64, 67, 194, 353, 446, 808, 971, 1307, 1536
SspI	AATATT	2 cut(s)	348, 1360
SspMI	CTAG	2 cut(s)	788, 1520
SstI	GAGCTC	1 cut(s)	290
StyD4I	CCNGG	6 cut(s)	32, 1055, 1056, 1299, 1338, 1461
StyI	CCWWGG	2 cut(s)	417, 1273
TaaI	ACNGT	3 cut(s)	373, 919, 1681
TaiI	ACGT	1 cut(s)	755
TaqI	TCGA	2 cut(s)	679, 1667
TauI	GCSGC	5 cut(s)	67, 196, 356, 1310, 1538
TfiI	GAWTC	5 cut(s)	120, 464, 635, 1174, 1202
Tru1I	TTAA	2 cut(s)	381, 651
Tru9I	TTAA	2 cut(s)	381, 651
TscAI	CASTG	5 cut(s)	429, 589, 667, 924, 1422
TseFI	GTSAC	3 cut(s)	658, 715, 1239
Tsp45I	GTSAC	3 cut(s)	658, 715, 1239
TspDTI	ATGAA	1 cut(s)	944
TspGWI	ACGGA	1 cut(s)	1258
TspMI	CCCGGG	1 cut(s)	1056
TspRI	CASTG	5 cut(s)	429, 589, 667, 924, 1422
Van91I	CCANNNNNTGG	1 cut(s)	248
VpaK11BI	GGWCC	1 cut(s)	1013
XapI	RAATTY	2 cut(s)	1278, 1314
XceI	RCATGY	1 cut(s)	569
XmaI	CCCGGG	1 cut(s)	1056
XmiI	GTMKAC	1 cut(s)	755
XspI	CTAG	2 cut(s)	788, 1520
ZraI	GACGTC	1 cut(s)	753
Zsp2I	ATGCAT	1 cut(s)	571

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.