Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0003147

Physical Location & Seq

Genomic Coordinates Reverse (-)

6671837 .. 6676930

Gene Structure 5094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG065300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGCTTCCCTCGCATTTGGGGCCCATATGCCCCAGTCCCACCACCAATTGAAGAAAAGCTCGCGGCGGTTTCTCTCTCAGACCCAAAGCTTAGCTCCTTTTGGTTCGTCTTTGCGTGGAGTCAGAGGCCCAAGATTGCTGGGCAATGGAATGTTGGTCAGAGCTGAAGAGAAAGCCAGAGGTTCGGGTTCGGGTTCGGGTCAGCTGCCCAAGGCTCAGTCCCAGTCTGAGAAAGAGTTGCAGGAGTTAACACCAAGTTCTGGATCATGTGATCCTTTATGTTCGGTTGACGAAACAAGTTCAAGTGATTTTGAGGCCAGTTACAAGCCAAAGACTGATTTGCTGAAAGCTATAGCAATATTTGCGGCAGCTGCAGCAGGGACGGTGGCAATTAACCACTCATGGGTTGCTGCTAATCAGGATGTTGCCATGGCACTGCTATTTGGAATAGGATATGCGGGCATTATTTTTGAAGAATCTCTGGCCTTCAACAAGAGTGGAGTAGGTTTGATAATGGCTGTATGCTTGTGGATAGTGAGAAGTATTGGTGCTCCTTCAACTGATATAGCTGTTGCAGAGTTACAACATGCATCTGCTGAAGTCAGTGAAATAGTGTTTTTCCTGCTTGGTGCAATGACAATTGTAGAGATAGTTGATGCTCATCAAGGATTTAAGCTGGTCACTGACAATATAACTACTCGAAAGCCAAGAACACTCCTCTGGGTGGTTGGTTTTGTGACTTTCTTCCTTAGTTCAATTCTTGACAACCTGACGTCTACCATTGTCATGGTCTCTTTATTGCGAAAATTAGTGCCTCCCTCAGACTTCCGCAAGCTTTTAGGAGGAGTTGTTGTCATAGCTGCAAATGCTGGTGGTGCGTGGACTCCTATTGGTGATGTTACCACCACTATGTTATGGATACATGGTCAGATATCAACAGTGGAGACAATGAAGGGATTATTTATACCAGCAGTCGTTTCTCTTGCTGTTCCGCTGGCACTTTTGTCCCTTACAAGTGAAGCAAGTGGTGATGGACCAGACACATCCAATGTTATGGCATCCGAACAGATGGCTCCCCGGGGACAGCTTGTTTTCTCTGTAGGCATCGGAGCTTTGATTTTTGTTCCAGTTTTCAAGTCCCTAACTGGTTTGCCTCCTTACATGGGTATGCTGCTGGGACTTGGAGTCCTTTGGATTCTGACTGATGCAATCCACTATGGTGAATCGGAAAGACAAAGGTTGAAAGTACCACAGGCTTTGTCACGGATTGACACTCAAGGAGCACTTTTCTTCCTTGGAATTCTTTTATCTGTTAGCAGCCTGGAGGCGGCAGGAATTCTTCGGGAATTAGCAAACTACCTGGATGCTCATATTCCCAATATTGAACTGATTGCAAGTTCAATAGGAATTGTCTCAGCAATTATAGACAATGTTCCACTGGTTGCTGCAGCTATGGGGACGTACGATGTCGCCTCTTTTCCCCAGGACTCTGAGTTTTGGCAGCTGGTTGCATATTGTGCTGGTACTGGTGGATCCATGTTAGTTATTGGTTCTGCAGCCGGAGTTGCTTTTATGGGGATGGAAAAGGTGGACTTCTTCTGGTACTTTCGCAAGGTGAGTGGGTTTGCTTTTGCCGGTTATGCTGCTGGTATTGCAGCCTATTTAGCAGCTCAAAACCTCCACATCTCGATACCAACAACCGTAGCTCAGGTTCCTTTCCTTTCTGGATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006814 GO:0006820 GO:0006848 GO:0006950 GO:0006970 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009941 GO:0015075 GO:0015291 GO:0015297 GO:0015318 GO:0015672 GO:0015711 GO:0015718 GO:0015849 GO:0022804 GO:0022857 GO:0030001 GO:0031967 GO:0031975 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050833 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098656 GO:1901475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CitMHS

Protein Analysis

577

Amino Acids

60.93

Weight (kDa)

5.83

Isoelectric Point (pI)

37.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CitMHS	PF03600	153 - 489	4.4e-25	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49810 AT3G19490
fragaria_vesca	FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320
malus_domestica	MD05G1088200.v1.1
prunus_persica	Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1
pyrus_communis	pycom05g08760 pycom10g08240
rosa_chinensis	RchiOBHm_Chr6g0255461 RchiOBHm_Chr6g0255491 RchiOBHm_Chr6g0255511 RchiOBHm_Chr6g0255521
rosa_laevigata	RLG00000014834 RLG00000014835
rosa_multiflora	Rmu_sc0002360.1_g000008
rosa_roxburghii	Rroxscaffold_7G00209940 Rroxscaffold_7G00209960
rosa_rugosa	Rorug05G0559000 Rorug05G0559100 Rorug05G0559100
rosa_samantha	Rh6AG076700 Rh6AG077100 Rh6AG077200 Rh6BG069500 Rh6BG069800 Rh6CG068500 Rh6DG065300
rosa_wichuraiana	Rw6G006660 Rw6G006680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	776
AccB7I	CCANNNNNTGG	1 cut(s)	260
AccI	GTMKAC	1 cut(s)	776
AccII	CGCG	1 cut(s)	64
AciI	CCGC	7 cut(s)	64, 67, 365, 458, 829, 992, 1328
AclWI	GGATC	5 cut(s)	266, 271, 1527, 1540, 1722
AcsI	RAATTY	2 cut(s)	1299, 1335
AcuI	CTGAAG	2 cut(s)	186, 618
AcyI	GRCGYC	1 cut(s)	773
AfaI	GTAC	4 cut(s)	1248, 1463, 1525, 1604
AfiI	CCNNNNNNNGG	5 cut(s)	260, 403, 724, 1163, 1327
AhdI	GACNNNNNGTC	1 cut(s)	1184
AjnI	CCWGG	3 cut(s)	1320, 1359, 1482
AleI	CACNNNNGTG	1 cut(s)	1218
Alw21I	GWGCWC	2 cut(s)	553, 1285
Alw26I	GTCTC	3 cut(s)	796, 938, 1417
AlwI	GGATC	5 cut(s)	266, 271, 1527, 1540, 1722
Ama87I	CYCGRG	1 cut(s)	1077
AoxI	GGCC	4 cut(s)	21, 127, 315, 483
ApaI	GGGCCC	1 cut(s)	25
ApoI	RAATTY	2 cut(s)	1299, 1335
AspS9I	GGNCC	4 cut(s)	21, 22, 128, 1034
AsuC2I	CCSGG	2 cut(s)	1078, 1079
AsuHPI	GGTGA	4 cut(s)	905, 1040, 1232, 1627
AvaI	CYCGRG	1 cut(s)	1077
AvaII	GGWCC	1 cut(s)	1034
BaeGI	GKGCMC	1 cut(s)	25
BamHI	GGATCC	2 cut(s)	1532, 1727
BanII	GRGCYC	1 cut(s)	25
Bbv12I	GWGCWC	2 cut(s)	553, 1285
BccI	CCATC	3 cut(s)	1025, 1063, 1573
BciT130I	CCWGG	3 cut(s)	1322, 1361, 1484
BciVI	GTATCC	1 cut(s)	912
BcnI	CCSGG	2 cut(s)	1078, 1079
BcoDI	GTCTC	3 cut(s)	796, 938, 1417
BfmI	CTRYAG	5 cut(s)	351, 372, 1098, 1446, 1554
BfuI	GTATCC	1 cut(s)	912
BlpI	GCTNAGC	1 cut(s)	91
Bme1390I	CCNGG	5 cut(s)	1078, 1079, 1322, 1361, 1484
Bme18I	GGWCC	1 cut(s)	1034
BmeRI	GACNNNNNGTC	1 cut(s)	1184
BmeT110I	CYCGRG	1 cut(s)	1077
BmgT120I	GGNCC	4 cut(s)	21, 22, 128, 1034
BmiI	GGNNCC	6 cut(s)	22, 23, 1074, 1534, 1713, 1729
BmrFI	CCNGG	5 cut(s)	1078, 1079, 1322, 1361, 1484
BmrI	ACTGGG	2 cut(s)	28, 217
BmsI	GCATC	6 cut(s)	599, 646, 1067, 1113, 1195, 1354
BmuI	ACTGGG	2 cut(s)	28, 217
BpmI	CTGGAG	1 cut(s)	1343
Bpu10I	CCTNAGC	1 cut(s)	1707
Bpu1102I	GCTNAGC	1 cut(s)	91
BpuEI	CTTGAG	1 cut(s)	1260
BpuMI	CCSGG	2 cut(s)	1078, 1079
BsaBI	GATNNNNATC	1 cut(s)	660
BsaHI	GRCGYC	1 cut(s)	773
BsaI	GGTCTC	1 cut(s)	796
BsaJI	CCNNGG	7 cut(s)	210, 429, 1076, 1077, 1078, 1294, 1482
BsaXI	ACNNNNNCTCC	4 cut(s)	834, 837, 864, 867
Bsc4I	CCNNNNNNNGG	5 cut(s)	260, 403, 724, 1163, 1327
Bse118I	RCCGGY	1 cut(s)	1634
Bse1I	ACTGG	7 cut(s)	34, 223, 318, 1127, 1150, 1443, 1531
Bse3DI	GCAATG	2 cut(s)	151, 639
Bse8I	GATNNNNATC	1 cut(s)	660
BseBI	CCWGG	3 cut(s)	1322, 1361, 1484
BseDI	CCNNGG	7 cut(s)	210, 429, 1076, 1077, 1078, 1294, 1482
BseGI	GGATG	5 cut(s)	427, 1043, 1058, 1369, 1584
BseJI	GATNNNNATC	1 cut(s)	660
BseLI	CCNNNNNNNGG	5 cut(s)	260, 403, 724, 1163, 1327
BseMI	GCAATG	2 cut(s)	151, 639
BseMII	CTCAG	7 cut(s)	92, 219, 230, 834, 1428, 1482, 1721
BseNI	ACTGG	7 cut(s)	34, 223, 318, 1127, 1150, 1443, 1531
BseRI	GAGGAG	2 cut(s)	707, 858
BseSI	GKGCMC	1 cut(s)	25
BseYI	CCCAGC	2 cut(s)	139, 1174
Bsh1236I	CGCG	1 cut(s)	64
BshFI	GGCC	4 cut(s)	23, 129, 317, 485
BsiHKAI	GWGCWC	2 cut(s)	553, 1285
BsiHKCI	CYCGRG	1 cut(s)	1077
BsiSI	CCGG	3 cut(s)	1078, 1560, 1635
BsiWI	CGTACG	1 cut(s)	1461
BslFI	GGGAC	8 cut(s)	22, 205, 394, 991, 1095, 1123, 1191, 1471
BslI	CCNNNNNNNGG	5 cut(s)	260, 403, 724, 1163, 1327
BsmAI	GTCTC	3 cut(s)	796, 938, 1417
BsmFI	GGGAC	8 cut(s)	22, 205, 394, 991, 1095, 1123, 1191, 1471
BsnI	GGCC	4 cut(s)	23, 129, 317, 485
Bso31I	GGTCTC	1 cut(s)	796
BsoBI	CYCGRG	1 cut(s)	1077
Bsp120I	GGGCCC	1 cut(s)	21
Bsp1286I	GDGCHC	3 cut(s)	25, 553, 1285
Bsp143I	GATC	4 cut(s)	263, 271, 1532, 1727
Bsp1720I	GCTNAGC	1 cut(s)	91
Bsp19I	CCATGG	1 cut(s)	429
BspACI	CCGC	7 cut(s)	64, 67, 365, 458, 829, 992, 1328
BspANI	GGCC	4 cut(s)	23, 129, 317, 485
BspCNI	CTCAG	7 cut(s)	91, 220, 229, 833, 1427, 1483, 1720
BspFNI	CGCG	1 cut(s)	64
BspLI	GGNNCC	6 cut(s)	22, 23, 1074, 1534, 1713, 1729
BspMAI	CTGCAG	3 cut(s)	376, 1450, 1558
BspPI	GGATC	5 cut(s)	266, 271, 1527, 1540, 1722
BspTNI	GGTCTC	1 cut(s)	796
BsrDI	GCAATG	2 cut(s)	151, 639
BsrFI	RCCGGY	1 cut(s)	1634
BsrI	ACTGG	7 cut(s)	34, 223, 318, 1127, 1150, 1443, 1531
BssAI	RCCGGY	1 cut(s)	1634
BssECI	CCNNGG	7 cut(s)	210, 429, 1076, 1077, 1078, 1294, 1482
BssMI	GATC	4 cut(s)	263, 271, 1532, 1727
BssNI	GRCGYC	1 cut(s)	773
BssT1I	CCWWGG	3 cut(s)	210, 429, 1294
Bst2UI	CCWGG	3 cut(s)	1322, 1361, 1484
Bst4CI	ACNGT	3 cut(s)	385, 940, 1702
Bst6I	CTCTTC	1 cut(s)	162
BstACI	GRCGYC	1 cut(s)	773
BstAPI	GCANNNNNTGC	2 cut(s)	362, 1517
BstC8I	GCNNGC	4 cut(s)	62, 460, 833, 996
BstDEI	CTNAG	9 cut(s)	78, 91, 216, 228, 749, 820, 1414, 1491, 1707
BstDSI	CCRYGG	1 cut(s)	429
BstF5I	GGATG	5 cut(s)	427, 1043, 1058, 1369, 1584
BstFNI	CGCG	1 cut(s)	64
BstKTI	GATC	4 cut(s)	266, 274, 1535, 1730
BstMAI	GTCTC	3 cut(s)	796, 938, 1417
BstMBI	GATC	4 cut(s)	263, 271, 1532, 1727
BstNI	CCWGG	3 cut(s)	1322, 1361, 1484
BstNSI	RCATGY	1 cut(s)	590
BstSCI	CCNGG	5 cut(s)	1076, 1077, 1320, 1359, 1482
BstSFI	CTRYAG	5 cut(s)	351, 372, 1098, 1446, 1554
BstSLI	GKGCMC	1 cut(s)	25
BstUI	CGCG	1 cut(s)	64
BstX2I	RGATCY	2 cut(s)	1532, 1727
BstXI	CCANNNNNNTGG	2 cut(s)	787, 1054
BstYI	RGATCY	2 cut(s)	1532, 1727
BsuI	GTATCC	1 cut(s)	912
BsuRI	GGCC	4 cut(s)	23, 129, 317, 485
BtgI	CCRYGG	1 cut(s)	429
BtsCI	GGATG	5 cut(s)	427, 1043, 1058, 1369, 1584
BtsI	GCAGTG	1 cut(s)	434
BtsIMutI	CAGTG	5 cut(s)	434, 610, 681, 945, 1436
Cac8I	GCNNGC	4 cut(s)	62, 460, 833, 996
Cfr10I	RCCGGY	1 cut(s)	1634
Cfr13I	GGNCC	4 cut(s)	21, 22, 128, 1034
Cfr9I	CCCGGG	1 cut(s)	1077
Csp6I	GTAC	4 cut(s)	1247, 1462, 1524, 1603
CspCI	CAANNNNNGTGG	6 cut(s)	478, 513, 1239, 1274, 1600, 1635
CviAII	CATG	8 cut(s)	267, 402, 430, 587, 787, 923, 1162, 1537
CviQI	GTAC	4 cut(s)	1247, 1462, 1524, 1603
DdeI	CTNAG	9 cut(s)	78, 91, 216, 228, 749, 820, 1414, 1491, 1707
DpnI	GATC	4 cut(s)	265, 273, 1534, 1729
DpnII	GATC	4 cut(s)	263, 271, 1532, 1727
DriI	GACNNNNNGTC	1 cut(s)	1184
Eam1104I	CTCTTC	1 cut(s)	162
Eam1105I	GACNNNNNGTC	1 cut(s)	1184
EarI	CTCTTC	1 cut(s)	162
Eco130I	CCWWGG	3 cut(s)	210, 429, 1294
Eco24I	GRGCYC	1 cut(s)	25
Eco31I	GGTCTC	1 cut(s)	796
Eco32I	GATATC	1 cut(s)	933
Eco47I	GGWCC	1 cut(s)	1034
Eco57I	CTGAAG	2 cut(s)	186, 618
Eco88I	CYCGRG	1 cut(s)	1077
EcoO109I	RGGNCCY	1 cut(s)	21
EcoRI	GAATTC	2 cut(s)	1299, 1335
EcoRII	CCWGG	3 cut(s)	1320, 1359, 1482
EcoRV	GATATC	1 cut(s)	933
EcoT14I	CCWWGG	3 cut(s)	210, 429, 1294
EcoT22I	ATGCAT	1 cut(s)	592
EcoT38I	GRGCYC	1 cut(s)	25
ErhI	CCWWGG	3 cut(s)	210, 429, 1294
FaeI	CATG	8 cut(s)	270, 405, 433, 590, 790, 926, 1165, 1540
FalI	AAGNNNNNCTT	4 cut(s)	1269, 1301, 1577, 1609
FaqI	GGGAC	8 cut(s)	22, 205, 394, 991, 1095, 1123, 1191, 1471
FatI	CATG	8 cut(s)	266, 401, 429, 586, 786, 922, 1161, 1536
FauI	CCCGC	1 cut(s)	451
FauNDI	CATATG	1 cut(s)	27
FblI	GTMKAC	1 cut(s)	776
FokI	GGATG	5 cut(s)	434, 1030, 1045, 1376, 1591
FriOI	GRGCYC	1 cut(s)	25
GsaI	CCCAGC	2 cut(s)	143, 1178
GsuI	CTGGAG	1 cut(s)	1343
HaeIII	GGCC	4 cut(s)	23, 129, 317, 485
HapII	CCGG	3 cut(s)	1078, 1560, 1635
Hin1I	GRCGYC	1 cut(s)	773
Hin1II	CATG	8 cut(s)	270, 405, 433, 590, 790, 926, 1165, 1540
HincII	GTYRAC	2 cut(s)	249, 289
HindII	GTYRAC	2 cut(s)	249, 289
HindIII	AAGCTT	2 cut(s)	88, 833
HinfI	GANTC	7 cut(s)	120, 476, 883, 1185, 1195, 1223, 1487
HpaI	GTTAAC	1 cut(s)	249
HpaII	CCGG	3 cut(s)	1078, 1560, 1635
HphI	GGTGA	4 cut(s)	905, 1040, 1232, 1627
Hpy166II	GTNNAC	5 cut(s)	249, 289, 777, 882, 1591
Hpy188III	TCNNGA	7 cut(s)	261, 419, 761, 1343, 1687, 1725, 1731
Hpy8I	GTNNAC	5 cut(s)	249, 289, 777, 882, 1591
HpyAV	CCTTC	3 cut(s)	496, 564, 946
HpyCH4III	ACNGT	3 cut(s)	385, 940, 1702
HpyCH4IV	ACGT	2 cut(s)	773, 1460
HpyF3I	CTNAG	9 cut(s)	78, 91, 216, 228, 749, 820, 1414, 1491, 1707
HpySE526I	ACGT	2 cut(s)	773, 1460
Hsp92I	GRCGYC	1 cut(s)	773
Hsp92II	CATG	8 cut(s)	270, 405, 433, 590, 790, 926, 1165, 1540
KspAI	GTTAAC	1 cut(s)	249
Kzo9I	GATC	4 cut(s)	263, 271, 1532, 1727
LmnI	GCTCC	5 cut(s)	100, 556, 1078, 1109, 1280
LweI	GCATC	6 cut(s)	599, 646, 1067, 1113, 1195, 1354
MaeII	ACGT	2 cut(s)	773, 1460
MaeIII	GTNAC	6 cut(s)	320, 579, 679, 736, 898, 1260
MalI	GATC	4 cut(s)	265, 273, 1534, 1729
MboI	GATC	4 cut(s)	263, 271, 1532, 1727
MboII	GAAGA	7 cut(s)	64, 179, 485, 736, 1282, 1331, 1588
MfeI	CAATTG	2 cut(s)	47, 639
MflI	RGATCY	2 cut(s)	1532, 1727
MhlI	GDGCHC	3 cut(s)	25, 553, 1285
MlyI	GAGTC	4 cut(s)	129, 877, 1194, 1481
Mph1103I	ATGCAT	1 cut(s)	592
MseI	TTAA	3 cut(s)	248, 393, 672
MslI	CAYNNNNRTG	4 cut(s)	785, 908, 1166, 1218
MspA1I	CMGCKG	4 cut(s)	205, 371, 994, 1504
MspI	CCGG	3 cut(s)	1078, 1560, 1635
MspR9I	CCNGG	5 cut(s)	1078, 1079, 1322, 1361, 1484
MunI	CAATTG	2 cut(s)	47, 639
MvaI	CCWGG	3 cut(s)	1322, 1361, 1484
MvnI	CGCG	1 cut(s)	64
NciI	CCSGG	2 cut(s)	1078, 1079
NcoI	CCATGG	1 cut(s)	429
NdeI	CATATG	1 cut(s)	27
NdeII	GATC	4 cut(s)	263, 271, 1532, 1727
NlaIII	CATG	8 cut(s)	270, 405, 433, 590, 790, 926, 1165, 1540
NlaIV	GGNNCC	6 cut(s)	22, 23, 1074, 1534, 1713, 1729
NmuCI	GTSAC	3 cut(s)	679, 736, 1260
NsiI	ATGCAT	1 cut(s)	592
NspI	RCATGY	1 cut(s)	590
OliI	CACNNNNGTG	1 cut(s)	1218
PfeI	GAWTC	3 cut(s)	476, 1195, 1223
Pfl23II	CGTACG	1 cut(s)	1461
PflMI	CCANNNNNTGG	1 cut(s)	260
PleI	GAGTC	4 cut(s)	128, 877, 1193, 1481
PpsI	GAGTC	4 cut(s)	128, 877, 1193, 1481
Psp6I	CCWGG	3 cut(s)	1320, 1359, 1482
PspFI	CCCAGC	2 cut(s)	139, 1174
PspGI	CCWGG	3 cut(s)	1320, 1359, 1482
PspLI	CGTACG	1 cut(s)	1461
PspN4I	GGNNCC	6 cut(s)	22, 23, 1074, 1534, 1713, 1729
PspOMI	GGGCCC	1 cut(s)	21
PspPI	GGNCC	4 cut(s)	21, 22, 128, 1034
PsrI	GAACNNNNNNTAC	2 cut(s)	1695, 1727
PstI	CTGCAG	3 cut(s)	376, 1450, 1558
PsuI	RGATCY	2 cut(s)	1532, 1727
PvuII	CAGCTG	3 cut(s)	205, 371, 1504
RsaI	GTAC	4 cut(s)	1248, 1463, 1525, 1604
RsaNI	GTAC	4 cut(s)	1247, 1462, 1524, 1603
RseI	CAYNNNNRTG	4 cut(s)	785, 908, 1166, 1218
SaqAI	TTAA	3 cut(s)	248, 393, 672
Sau3AI	GATC	4 cut(s)	263, 271, 1532, 1727
Sau96I	GGNCC	4 cut(s)	21, 22, 128, 1034
SchI	GAGTC	4 cut(s)	129, 877, 1194, 1481
ScrFI	CCNGG	5 cut(s)	1078, 1079, 1322, 1361, 1484
SduI	GDGCHC	3 cut(s)	25, 553, 1285
SfaNI	GCATC	6 cut(s)	599, 646, 1067, 1113, 1195, 1354
SfcI	CTRYAG	5 cut(s)	351, 372, 1098, 1446, 1554
SinI	GGWCC	1 cut(s)	1034
SmaI	CCCGGG	1 cut(s)	1079
SmiMI	CAYNNNNRTG	4 cut(s)	785, 908, 1166, 1218
SmlI	CTYRAG	1 cut(s)	1275
SmoI	CTYRAG	1 cut(s)	1275
SsiI	CCGC	7 cut(s)	64, 67, 365, 458, 829, 992, 1328
SspI	AATATT	2 cut(s)	360, 1381
StyD4I	CCNGG	5 cut(s)	1076, 1077, 1320, 1359, 1482
StyI	CCWWGG	3 cut(s)	210, 429, 1294
TaaI	ACNGT	3 cut(s)	385, 940, 1702
TaiI	ACGT	2 cut(s)	776, 1463
TaqI	TCGA	2 cut(s)	700, 1688
TauI	GCSGC	3 cut(s)	67, 368, 1331
TfiI	GAWTC	3 cut(s)	476, 1195, 1223
Tru1I	TTAA	3 cut(s)	248, 393, 672
Tru9I	TTAA	3 cut(s)	248, 393, 672
TscAI	CASTG	5 cut(s)	441, 610, 688, 945, 1443
TseFI	GTSAC	3 cut(s)	679, 736, 1260
Tsp45I	GTSAC	3 cut(s)	679, 736, 1260
TspDTI	ATGAA	1 cut(s)	965
TspGWI	ACGGA	1 cut(s)	1279
TspMI	CCCGGG	1 cut(s)	1077
TspRI	CASTG	5 cut(s)	441, 610, 688, 945, 1443
Van91I	CCANNNNNTGG	1 cut(s)	260
VpaK11BI	GGWCC	1 cut(s)	1034
XapI	RAATTY	2 cut(s)	1299, 1335
XceI	RCATGY	1 cut(s)	590
XmaI	CCCGGG	1 cut(s)	1077
XmiI	GTMKAC	1 cut(s)	776
ZraI	GACGTC	1 cut(s)	774
Zsp2I	ATGCAT	1 cut(s)	592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.