Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003147

Physical Location & Seq

Genomic Coordinates Reverse (-)

10833874 .. 10839430

Gene Structure 5557 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ22917

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGCTTCCCTTTCATTTGGGGCGCATATGCCACAGTCCCACCACCAATTCATGAAAAGCTCGCGGCGGTTTCTCTCTCAGACCGAAAGCTTAGCTCCTTTTGGTTCGTCTTTACGTGGATTCAGAGGCCCAAGATTGCTGGGCAATGGAATGTTGGTCAGAGCTGAAGAGAGAGCCAGAGGTTCGGGTTCGGGTTCGGGTTCGGGTCAGCTGCCCAAAGCTCAGTCCCAGTCTGAGAAAGAGTTGCAGGAGTTGACACAAAGTTCTGGATCATGTGATCCTTTATGTTCGGTTGACGAAACGAGCTCAAGTGATTTTGAGGCCAGTTACAAGCCAAAGACTGATTTGCTGAAAGCTATAGCAATATTTGCGGCAGCTGCAACAGGGACGGTGGCAATTAACCACTCATGGGTTGCTGCTAATCAGGATGTTGCCATGACACTGCTATTTGGAATAGGATATGCAGGCATTATTTTTGAAGAATCTCTGGCCTTCAACAAGAGTGGAGTAGGTTTGATAATGGCTGTATGCTTGTGGATAGTGAGAAGTATTGGTGCTCCTTCAACTGATATAGCTGTTGCAGAGTTACAACATGCATCTGCTGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACAATTGTAGAGATAGTTGATTCTCATCAAGGATTTAAGCTGGTCACTGACAATATAACTACTCGAAAGCCAAGAACACTCCTCTGGGTGGTTGGTTTTGTGACTTTCTTCCTTAGTTCAATTCTTGACAACCTGACGTCTACCATTGTCATGGTCTCTTTATTGCGAAAACTAGTGCCTCCCTCAGACTTCCGCAAGCTTTTAGGAGGAGTTGTTGTCATAGCTGCAAATGCTGGTGGTGCGTGGACTCCTATTGGTGATGTTACCACCACTATGTTATGGATACATGGTCAGATATCAACAGTGGAGACAATGAAGGGATTATTTATACCAGCAGTCGTTTCTCTTGCTGTTCCGCTGGCACTTTTGTCCCTTACAAGTGACGCAAGTGGTGATGGACCAGACACATCCAGTGTTATGGCATCCGAACAGATGGCTCCCCGGGGACAGCTTGTTTTCTCGGTAGGCATCGGAGCTTTGATTTTTGTTCCGGTTTTCAAGTCCCTAACTGGTTTGCCTCCTTACATGGGTATGCTGCTGGGACTTGGAGTCCTTTGGATTCTGACTGATGCAATCCACTATGGTGAATCGGAACGACAAAGGTTGAAAGTACCACAGGCTTTGTCACGGATTGACACTCAAGGAGCACTTTTCTTCCTTGGAATTCTTTTATCTGTTAGCAGCCTGGAGGCGGCAGGAATTCTTCGGGAATTAGCAAACTACCTGGATGCTCATATTCCCAATATTGAACTGATTGCAAGTTCAATAGGAATTGTCTCAGCAATTATAGACAATGTTCCACTGGTTGCTGCAGCTATGGGGATGTACGATGTCGCCTCTTTTCCCCAGGACTCTGAGTTTTGGCAGCTGGTTGCGTATTGTGCTGGTACTGGTGGATCCATGCTAGTTATTGGTTCTGCGGCCGGAGTTGCTTTTATGGGGATGGAAAAGGTGGACTTCTTCTGGTATTTTCGCAAGGTGAGTGGGTTTGCTTTTGCCGGTTATGCTGCTGGTATTGCAGCCTATTTAGCGGCTCAAAACCTCCACATCTCAATACCAACAACCGTAGCTCAGGTTCCTTTCCTTTCTGGATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006814 GO:0006820 GO:0006848 GO:0006950 GO:0006970 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009941 GO:0015075 GO:0015291 GO:0015297 GO:0015318 GO:0015672 GO:0015711 GO:0015718 GO:0015849 GO:0022804 GO:0022857 GO:0030001 GO:0031967 GO:0031975 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050833 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098656 GO:1901475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CitMHS

Protein Analysis

579

Amino Acids

61.3

Weight (kDa)

5.61

Isoelectric Point (pI)

38.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CitMHS	PF03600	155 - 495	1.2e-24	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49810 AT3G19490
fragaria_vesca	FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320 FvH4_2g05320
malus_domestica	MD05G1088200.v1.1
prunus_persica	Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1 Prupe.8G134200_v2.0.a1
pyrus_communis	pycom05g08760 pycom10g08240
rosa_chinensis	RchiOBHm_Chr6g0255461 RchiOBHm_Chr6g0255491 RchiOBHm_Chr6g0255511 RchiOBHm_Chr6g0255521
rosa_laevigata	RLG00000014834 RLG00000014835
rosa_multiflora	Rmu_sc0002360.1_g000008
rosa_roxburghii	Rroxscaffold_7G00209940 Rroxscaffold_7G00209960
rosa_rugosa	Rorug05G0559000 Rorug05G0559100 Rorug05G0559100
rosa_samantha	Rh6AG076700 Rh6AG077100 Rh6AG077200 Rh6BG069500 Rh6BG069800 Rh6CG068500 Rh6DG065300
rosa_wichuraiana	Rw6G006660 Rw6G006680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	782
AccI	GTMKAC	1 cut(s)	782
AccII	CGCG	1 cut(s)	64
AciI	CCGC	8 cut(s)	64, 67, 371, 835, 998, 1334, 1562, 1673
AclWI	GGATC	5 cut(s)	272, 277, 1533, 1546, 1728
AcoI	YGGCCR	1 cut(s)	1563
AcsI	RAATTY	2 cut(s)	1305, 1341
AcuI	CTGAAG	2 cut(s)	186, 624
AcyI	GRCGYC	1 cut(s)	779
AfaI	GTAC	3 cut(s)	1254, 1469, 1531
AfiI	CCNNNNNNNGG	4 cut(s)	409, 730, 1169, 1333
AgsI	TTSAA	8 cut(s)	479, 496, 564, 762, 1141, 1249, 1391, 1407
AhdI	GACNNNNNGTC	1 cut(s)	1190
AhlI	ACTAGT	1 cut(s)	814
AjnI	CCWGG	3 cut(s)	1326, 1365, 1488
AleI	CACNNNNGTG	1 cut(s)	1224
Alw21I	GWGCWC	3 cut(s)	308, 559, 1291
Alw26I	GTCTC	3 cut(s)	802, 944, 1423
AlwI	GGATC	5 cut(s)	272, 277, 1533, 1546, 1728
Ama87I	CYCGRG	1 cut(s)	1083
AoxI	GGCC	4 cut(s)	127, 321, 489, 1563
ApoI	RAATTY	2 cut(s)	1305, 1341
AspLEI	GCGC	1 cut(s)	25
AspS9I	GGNCC	2 cut(s)	128, 1040
AsuC2I	CCSGG	2 cut(s)	1084, 1085
AsuHPI	GGTGA	4 cut(s)	911, 1046, 1238, 1633
AvaI	CYCGRG	1 cut(s)	1083
AvaII	GGWCC	1 cut(s)	1040
BamHI	GGATCC	2 cut(s)	1538, 1733
BanII	GRGCYC	1 cut(s)	308
Bbv12I	GWGCWC	3 cut(s)	308, 559, 1291
BccI	CCATC	3 cut(s)	1031, 1069, 1579
BciT130I	CCWGG	3 cut(s)	1328, 1367, 1490
BciVI	GTATCC	1 cut(s)	918
BcnI	CCSGG	2 cut(s)	1084, 1085
BcoDI	GTCTC	3 cut(s)	802, 944, 1423
BcuI	ACTAGT	1 cut(s)	814
BfaI	CTAG	2 cut(s)	815, 1547
BfmI	CTRYAG	2 cut(s)	357, 1452
BfuI	GTATCC	1 cut(s)	918
BlpI	GCTNAGC	1 cut(s)	91
Bme1390I	CCNGG	5 cut(s)	1084, 1085, 1328, 1367, 1490
Bme18I	GGWCC	1 cut(s)	1040
BmeRI	GACNNNNNGTC	1 cut(s)	1190
BmeT110I	CYCGRG	1 cut(s)	1083
BmgT120I	GGNCC	2 cut(s)	128, 1040
BmiI	GGNNCC	4 cut(s)	1080, 1540, 1719, 1735
BmrFI	CCNGG	5 cut(s)	1084, 1085, 1328, 1367, 1490
BmrI	ACTGGG	1 cut(s)	223
BmsI	GCATC	5 cut(s)	605, 1073, 1119, 1201, 1360
BmuI	ACTGGG	1 cut(s)	223
BpmI	CTGGAG	1 cut(s)	1349
Bpu10I	CCTNAGC	1 cut(s)	1713
Bpu1102I	GCTNAGC	1 cut(s)	91
BpuEI	CTTGAG	2 cut(s)	292, 1266
BpuMI	CCSGG	2 cut(s)	1084, 1085
BsaAI	YACGTR	1 cut(s)	116
BsaBI	GATNNNNATC	1 cut(s)	666
BsaHI	GRCGYC	1 cut(s)	779
BsaI	GGTCTC	1 cut(s)	802
BsaJI	CCNNGG	5 cut(s)	1082, 1083, 1084, 1300, 1488
BsaWI	WCCGGW	1 cut(s)	1132
BsaXI	ACNNNNNCTCC	4 cut(s)	840, 843, 870, 873
Bsc4I	CCNNNNNNNGG	4 cut(s)	409, 730, 1169, 1333
Bse118I	RCCGGY	1 cut(s)	1640
Bse1I	ACTGG	6 cut(s)	229, 324, 1053, 1156, 1449, 1537
Bse3DI	GCAATG	2 cut(s)	151, 645
Bse8I	GATNNNNATC	1 cut(s)	666
BseBI	CCWGG	3 cut(s)	1328, 1367, 1490
BseDI	CCNNGG	5 cut(s)	1082, 1083, 1084, 1300, 1488
BseGI	GGATG	6 cut(s)	433, 1049, 1064, 1375, 1470, 1590
BseJI	GATNNNNATC	1 cut(s)	666
BseLI	CCNNNNNNNGG	4 cut(s)	409, 730, 1169, 1333
BseMI	GCAATG	2 cut(s)	151, 645
BseMII	CTCAG	7 cut(s)	92, 225, 236, 840, 1434, 1488, 1727
BseNI	ACTGG	6 cut(s)	229, 324, 1053, 1156, 1449, 1537
BseRI	GAGGAG	2 cut(s)	713, 864
BseX3I	CGGCCG	1 cut(s)	1563
BseYI	CCCAGC	2 cut(s)	139, 1180
Bsh1236I	CGCG	1 cut(s)	64
Bsh1285I	CGRYCG	1 cut(s)	1566
BshFI	GGCC	4 cut(s)	129, 323, 491, 1565
BsiEI	CGRYCG	1 cut(s)	1566
BsiHKAI	GWGCWC	3 cut(s)	308, 559, 1291
BsiHKCI	CYCGRG	1 cut(s)	1083
BsiSI	CCGG	4 cut(s)	1084, 1133, 1566, 1641
BslFI	GGGAC	7 cut(s)	22, 211, 400, 997, 1101, 1129, 1197
BslI	CCNNNNNNNGG	4 cut(s)	409, 730, 1169, 1333
BsmAI	GTCTC	3 cut(s)	802, 944, 1423
BsmFI	GGGAC	7 cut(s)	22, 211, 400, 997, 1101, 1129, 1197
BsnI	GGCC	4 cut(s)	129, 323, 491, 1565
Bso31I	GGTCTC	1 cut(s)	802
BsoBI	CYCGRG	1 cut(s)	1083
Bsp1286I	GDGCHC	3 cut(s)	308, 559, 1291
Bsp143I	GATC	4 cut(s)	269, 277, 1538, 1733
Bsp1720I	GCTNAGC	1 cut(s)	91
BspACI	CCGC	8 cut(s)	64, 67, 371, 835, 998, 1334, 1562, 1673
BspANI	GGCC	4 cut(s)	129, 323, 491, 1565
BspCNI	CTCAG	7 cut(s)	91, 226, 235, 839, 1433, 1489, 1726
BspFNI	CGCG	1 cut(s)	64
BspHI	TCATGA	1 cut(s)	51
BspLI	GGNNCC	4 cut(s)	1080, 1540, 1719, 1735
BspMAI	CTGCAG	1 cut(s)	1456
BspPI	GGATC	5 cut(s)	272, 277, 1533, 1546, 1728
BspTNI	GGTCTC	1 cut(s)	802
BsrDI	GCAATG	2 cut(s)	151, 645
BsrFI	RCCGGY	1 cut(s)	1640
BsrI	ACTGG	6 cut(s)	229, 324, 1053, 1156, 1449, 1537
BssAI	RCCGGY	1 cut(s)	1640
BssECI	CCNNGG	5 cut(s)	1082, 1083, 1084, 1300, 1488
BssMI	GATC	4 cut(s)	269, 277, 1538, 1733
BssNI	GRCGYC	1 cut(s)	779
BssT1I	CCWWGG	1 cut(s)	1300
Bst2UI	CCWGG	3 cut(s)	1328, 1367, 1490
Bst4CI	ACNGT	4 cut(s)	36, 391, 946, 1708
Bst6I	CTCTTC	1 cut(s)	162
BstACI	GRCGYC	1 cut(s)	779
BstAPI	GCANNNNNTGC	1 cut(s)	368
BstBAI	YACGTR	1 cut(s)	116
BstC8I	GCNNGC	4 cut(s)	62, 466, 839, 1002
BstDEI	CTNAG	9 cut(s)	78, 91, 222, 234, 755, 826, 1420, 1497, 1713
BstF5I	GGATG	6 cut(s)	433, 1049, 1064, 1375, 1470, 1590
BstFNI	CGCG	1 cut(s)	64
BstHHI	GCGC	1 cut(s)	25
BstKTI	GATC	4 cut(s)	272, 280, 1541, 1736
BstMAI	GTCTC	3 cut(s)	802, 944, 1423
BstMBI	GATC	4 cut(s)	269, 277, 1538, 1733
BstMCI	CGRYCG	1 cut(s)	1566
BstMWI	GCNNNNNNNGC	9 cut(s)	368, 377, 872, 881, 1523, 1571, 1646, 1658, 1670
BstNI	CCWGG	3 cut(s)	1328, 1367, 1490
BstNSI	RCATGY	1 cut(s)	596
BstSCI	CCNGG	5 cut(s)	1082, 1083, 1326, 1365, 1488
BstSFI	CTRYAG	2 cut(s)	357, 1452
BstUI	CGCG	1 cut(s)	64
BstX2I	RGATCY	2 cut(s)	1538, 1733
BstXI	CCANNNNNNTGG	2 cut(s)	793, 1060
BstYI	RGATCY	2 cut(s)	1538, 1733
BstZI	CGGCCG	1 cut(s)	1563
BsuI	GTATCC	1 cut(s)	918
BsuRI	GGCC	4 cut(s)	129, 323, 491, 1565
BtsCI	GGATG	6 cut(s)	433, 1049, 1064, 1375, 1470, 1590
BtsI	GCAGTG	1 cut(s)	440
BtsIMutI	CAGTG	6 cut(s)	440, 616, 687, 951, 1060, 1442
Cac8I	GCNNGC	4 cut(s)	62, 466, 839, 1002
CciI	TCATGA	1 cut(s)	51
CfoI	GCGC	1 cut(s)	25
Cfr10I	RCCGGY	1 cut(s)	1640
Cfr13I	GGNCC	2 cut(s)	128, 1040
Cfr9I	CCCGGG	1 cut(s)	1083
CseI	GACGC	1 cut(s)	1034
Csp6I	GTAC	3 cut(s)	1253, 1468, 1530
CspCI	CAANNNNNGTGG	6 cut(s)	484, 519, 1245, 1280, 1606, 1641
CviAII	CATG	9 cut(s)	52, 273, 408, 436, 593, 793, 929, 1168, 1543
CviQI	GTAC	3 cut(s)	1253, 1468, 1530
DdeI	CTNAG	9 cut(s)	78, 91, 222, 234, 755, 826, 1420, 1497, 1713
DpnI	GATC	4 cut(s)	271, 279, 1540, 1735
DpnII	GATC	4 cut(s)	269, 277, 1538, 1733
DriI	GACNNNNNGTC	1 cut(s)	1190
EaeI	YGGCCR	1 cut(s)	1563
EagI	CGGCCG	1 cut(s)	1563
Eam1104I	CTCTTC	1 cut(s)	162
Eam1105I	GACNNNNNGTC	1 cut(s)	1190
EarI	CTCTTC	1 cut(s)	162
Ecl136II	GAGCTC	1 cut(s)	306
EclXI	CGGCCG	1 cut(s)	1563
Eco130I	CCWWGG	1 cut(s)	1300
Eco24I	GRGCYC	1 cut(s)	308
Eco31I	GGTCTC	1 cut(s)	802
Eco32I	GATATC	1 cut(s)	939
Eco47I	GGWCC	1 cut(s)	1040
Eco52I	CGGCCG	1 cut(s)	1563
Eco53kI	GAGCTC	1 cut(s)	306
Eco57I	CTGAAG	2 cut(s)	186, 624
Eco88I	CYCGRG	1 cut(s)	1083
EcoICRI	GAGCTC	1 cut(s)	306
EcoRI	GAATTC	2 cut(s)	1305, 1341
EcoRII	CCWGG	3 cut(s)	1326, 1365, 1488
EcoRV	GATATC	1 cut(s)	939
EcoT14I	CCWWGG	1 cut(s)	1300
EcoT22I	ATGCAT	1 cut(s)	598
EcoT38I	GRGCYC	1 cut(s)	308
ErhI	CCWWGG	1 cut(s)	1300
FaeI	CATG	9 cut(s)	55, 276, 411, 439, 596, 796, 932, 1171, 1546
FalI	AAGNNNNNCTT	4 cut(s)	1275, 1307, 1583, 1615
FaqI	GGGAC	7 cut(s)	22, 211, 400, 997, 1101, 1129, 1197
FatI	CATG	9 cut(s)	51, 272, 407, 435, 592, 792, 928, 1167, 1542
FauNDI	CATATG	1 cut(s)	27
FblI	GTMKAC	1 cut(s)	782
FokI	GGATG	6 cut(s)	440, 1036, 1051, 1382, 1477, 1597
FriOI	GRGCYC	1 cut(s)	308
FspBI	CTAG	2 cut(s)	815, 1547
GlaI	GCGC	1 cut(s)	24
GsaI	CCCAGC	2 cut(s)	143, 1184
GsuI	CTGGAG	1 cut(s)	1349
HaeIII	GGCC	4 cut(s)	129, 323, 491, 1565
HapII	CCGG	4 cut(s)	1084, 1133, 1566, 1641
HgaI	GACGC	1 cut(s)	1034
HhaI	GCGC	1 cut(s)	25
Hin1I	GRCGYC	1 cut(s)	779
Hin1II	CATG	9 cut(s)	55, 276, 411, 439, 596, 796, 932, 1171, 1546
Hin6I	GCGC	1 cut(s)	23
HinP1I	GCGC	1 cut(s)	23
HincII	GTYRAC	2 cut(s)	255, 295
HindII	GTYRAC	2 cut(s)	255, 295
HindIII	AAGCTT	2 cut(s)	88, 839
HinfI	GANTC	8 cut(s)	120, 482, 662, 889, 1191, 1201, 1229, 1493
HpaII	CCGG	4 cut(s)	1084, 1133, 1566, 1641
HphI	GGTGA	4 cut(s)	911, 1046, 1238, 1633
Hpy166II	GTNNAC	5 cut(s)	255, 295, 783, 888, 1597
Hpy188III	TCNNGA	7 cut(s)	52, 267, 425, 767, 1349, 1731, 1737
Hpy8I	GTNNAC	5 cut(s)	255, 295, 783, 888, 1597
HpyAV	CCTTC	3 cut(s)	502, 570, 952
HpyCH4III	ACNGT	4 cut(s)	36, 391, 946, 1708
HpyCH4IV	ACGT	2 cut(s)	115, 779
HpyF10VI	GCNNNNNNNGC	9 cut(s)	368, 377, 872, 881, 1523, 1571, 1646, 1658, 1670
HpyF3I	CTNAG	9 cut(s)	78, 91, 222, 234, 755, 826, 1420, 1497, 1713
HpySE526I	ACGT	2 cut(s)	115, 779
Hsp92I	GRCGYC	1 cut(s)	779
Hsp92II	CATG	9 cut(s)	55, 276, 411, 439, 596, 796, 932, 1171, 1546
HspAI	GCGC	1 cut(s)	23
Kzo9I	GATC	4 cut(s)	269, 277, 1538, 1733
LmnI	GCTCC	5 cut(s)	100, 562, 1084, 1115, 1286
LweI	GCATC	5 cut(s)	605, 1073, 1119, 1201, 1360
MaeI	CTAG	2 cut(s)	815, 1547
MaeII	ACGT	2 cut(s)	115, 779
MaeIII	GTNAC	7 cut(s)	326, 585, 685, 742, 904, 1022, 1266
MalI	GATC	4 cut(s)	271, 279, 1540, 1735
MboI	GATC	4 cut(s)	269, 277, 1538, 1733
MboII	GAAGA	6 cut(s)	179, 491, 742, 1288, 1337, 1594
MfeI	CAATTG	1 cut(s)	645
MflI	RGATCY	2 cut(s)	1538, 1733
MhlI	GDGCHC	3 cut(s)	308, 559, 1291
MluCI	AATT	9 cut(s)	47, 396, 645, 762, 1305, 1341, 1352, 1413, 1425
MlyI	GAGTC	3 cut(s)	883, 1200, 1487
Mph1103I	ATGCAT	1 cut(s)	598
MseI	TTAA	2 cut(s)	399, 678
MslI	CAYNNNNRTG	4 cut(s)	791, 914, 1172, 1224
MspA1I	CMGCKG	4 cut(s)	211, 377, 1000, 1510
MspI	CCGG	4 cut(s)	1084, 1133, 1566, 1641
MspR9I	CCNGG	5 cut(s)	1084, 1085, 1328, 1367, 1490
MunI	CAATTG	1 cut(s)	645
MvaI	CCWGG	3 cut(s)	1328, 1367, 1490
MvnI	CGCG	1 cut(s)	64
MwoI	GCNNNNNNNGC	9 cut(s)	368, 377, 872, 881, 1523, 1571, 1646, 1658, 1670
NciI	CCSGG	2 cut(s)	1084, 1085
NdeI	CATATG	1 cut(s)	27
NdeII	GATC	4 cut(s)	269, 277, 1538, 1733
NlaIII	CATG	9 cut(s)	55, 276, 411, 439, 596, 796, 932, 1171, 1546
NlaIV	GGNNCC	4 cut(s)	1080, 1540, 1719, 1735
NmuCI	GTSAC	4 cut(s)	685, 742, 1022, 1266
NsiI	ATGCAT	1 cut(s)	598
NspI	RCATGY	1 cut(s)	596
OliI	CACNNNNGTG	1 cut(s)	1224
PagI	TCATGA	1 cut(s)	51
PfeI	GAWTC	5 cut(s)	120, 482, 662, 1201, 1229
PleI	GAGTC	3 cut(s)	883, 1199, 1487
PpsI	GAGTC	3 cut(s)	883, 1199, 1487
Ppu21I	YACGTR	1 cut(s)	116
Psp124BI	GAGCTC	1 cut(s)	308
Psp6I	CCWGG	3 cut(s)	1326, 1365, 1488
PspFI	CCCAGC	2 cut(s)	139, 1180
PspGI	CCWGG	3 cut(s)	1326, 1365, 1488
PspN4I	GGNNCC	4 cut(s)	1080, 1540, 1719, 1735
PspPI	GGNCC	2 cut(s)	128, 1040
PsrI	GAACNNNNNNTAC	2 cut(s)	1701, 1733
PstI	CTGCAG	1 cut(s)	1456
PsuI	RGATCY	2 cut(s)	1538, 1733
PvuII	CAGCTG	3 cut(s)	211, 377, 1510
RsaI	GTAC	3 cut(s)	1254, 1469, 1531
RsaNI	GTAC	3 cut(s)	1253, 1468, 1530
RseI	CAYNNNNRTG	4 cut(s)	791, 914, 1172, 1224
SacI	GAGCTC	1 cut(s)	308
SaqAI	TTAA	2 cut(s)	399, 678
Sau3AI	GATC	4 cut(s)	269, 277, 1538, 1733
Sau96I	GGNCC	2 cut(s)	128, 1040
SchI	GAGTC	3 cut(s)	883, 1200, 1487
ScrFI	CCNGG	5 cut(s)	1084, 1085, 1328, 1367, 1490
SduI	GDGCHC	3 cut(s)	308, 559, 1291
SfaNI	GCATC	5 cut(s)	605, 1073, 1119, 1201, 1360
SfcI	CTRYAG	2 cut(s)	357, 1452
SinI	GGWCC	1 cut(s)	1040
SmaI	CCCGGG	1 cut(s)	1085
SmiMI	CAYNNNNRTG	4 cut(s)	791, 914, 1172, 1224
SmlI	CTYRAG	2 cut(s)	307, 1281
SmoI	CTYRAG	2 cut(s)	307, 1281
SpeI	ACTAGT	1 cut(s)	814
Sse9I	AATT	9 cut(s)	47, 396, 645, 762, 1305, 1341, 1352, 1413, 1425
SsiI	CCGC	8 cut(s)	64, 67, 371, 835, 998, 1334, 1562, 1673
SspI	AATATT	2 cut(s)	366, 1387
SspMI	CTAG	2 cut(s)	815, 1547
SstI	GAGCTC	1 cut(s)	308
StyD4I	CCNGG	5 cut(s)	1082, 1083, 1326, 1365, 1488
StyI	CCWWGG	1 cut(s)	1300
TaaI	ACNGT	4 cut(s)	36, 391, 946, 1708
TaiI	ACGT	2 cut(s)	118, 782
TaqI	TCGA	1 cut(s)	706
TaqII	GACCGA	1 cut(s)	98
TasI	AATT	9 cut(s)	47, 396, 645, 762, 1305, 1341, 1352, 1413, 1425
TauI	GCSGC	5 cut(s)	67, 374, 1337, 1565, 1676
TfiI	GAWTC	5 cut(s)	120, 482, 662, 1201, 1229
Tru1I	TTAA	2 cut(s)	399, 678
Tru9I	TTAA	2 cut(s)	399, 678
TscAI	CASTG	6 cut(s)	447, 616, 694, 951, 1060, 1449
TseFI	GTSAC	4 cut(s)	685, 742, 1022, 1266
Tsp45I	GTSAC	4 cut(s)	685, 742, 1022, 1266
TspDTI	ATGAA	3 cut(s)	40, 68, 971
TspGWI	ACGGA	1 cut(s)	1285
TspMI	CCCGGG	1 cut(s)	1083
TspRI	CASTG	6 cut(s)	447, 616, 694, 951, 1060, 1449
VpaK11BI	GGWCC	1 cut(s)	1040
XapI	RAATTY	2 cut(s)	1305, 1341
XceI	RCATGY	1 cut(s)	596
XmaI	CCCGGG	1 cut(s)	1083
XmiI	GTMKAC	1 cut(s)	782
XspI	CTAG	2 cut(s)	815, 1547
ZraI	GACGTC	1 cut(s)	780
Zsp2I	ATGCAT	1 cut(s)	598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.