MD05G1121300.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
24404832 .. 24407951
3120 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1121300.v1.1.491

Sequence Viewer

Length: 1761 bp
ATGATACTTGAGGAGGCATTGAGGGACTTGATAAAGAAGAAGAATAAGAAGAAGAATGTTGTGTTGGTTGGGATTCCAATTGATAGCCAGAGCACAGAGCTTCTCGGATGGGCTCTCGTTAAAGTCGCCCAGCCCGGAGATTGCGTGATTGCAGCTCATGTCTGTCGAAGTTCTGATTATGTCTCGAAAGCCAAGACGATGTTGGATGGTTACGTAGAGGCTTATGAGGGGCTATGTGACATGAAAAAGGTGGAGCTCATCAGTCAGGTCTTGACGGGAAGGTCAATCCGAAAAGCTCTAGTTAGAGAGGCGAAAAAACATTCTACCGTGGCCATAGTTGTAGGCATAAGCAATCCAAACACTCTTGGCAGTTGGGATTCTACGGCGAAATTCTGCGGTAAGAAATTGGGACCAACCACTGATGTTGTGGGCATCCACAACGGGAAAATTGTGTTCAGAAGGTGCACCAGCAACCAACTACCAGCTTTGGTAGGTCTCACAGAAGACCCAAGACCAAGTCTTTGCTTTGAGAGTCTCACTCCCAAAGGATACTCATCTGAATTTGGTGACTTTGAGGCGGATACAGAAACCCCGAAATCTTCTAATATGGCAGAGGGCTCCCTAGATGGTTCGAAGCACAGTAGTGAAGACACGATGTATGAACAAAAGAGAGTGCCTTGGAGATCAACTTCACTTGGTGCAGCAGAACATGTGGTTAAGAACCTTGGCTGGCCCCTACTTCGAAGAGCGAGTTCTGCCAATCCTCAATTTCCCGCCACCAGGGACATGTCTGTGGTGCAATGGGTGATGAGCTTGCCTGACCGCTCTCCACAGCAGTCTCCTCAGTGTACAACTATCAAAGAAAATCCGTTCGAACGAAGTATAGGTGACATTATTGATGAGAGTATGGAGGATGGTTTTTCTGCTTTTGATGAGCTTCCTGAAAGGTTAAAGCATCTGCTCCAAACAAAATCATCTGGTTGCAGATGGTTTAGTCATGAGCTTCTAAAAGCTTCAACTTCTCAATTTTCTTCAGAAAATCTTATCGGGAAAGGAGGATGCAACCTCGTCTACAAGGGAACTCTTTCAGATGGGAAGCCAGTGGCAGTGAAGATTATGAAATCATCCAAAGAAGCATGGAAGGATTTCACTGATGAAGTCGATATCATGTCCTCGCTGAAGCACAAAAACATTTTACCTCTGCTCGGGTTCTGCATCAAAGACAACGTTCTAATCTCTGTGTATGATTTCTTACCTAAGGGAAGCTTAGAGGCAAATTTACATGGCAAGAACAACTACAAATCTCTATTGTCATGGGAGGTGAGATTTAATGTTGCTGTTGGTATTGCTAAAGCCCTCAGTTATCTGAACAACGAATGTCCTCAACCAGTTATTCATAGAGATGTCAAGTCCTCAAACATTCTTCTCACCAAAGATTTTGAACCGCAGTTATCTGATTTTGGCCTTGCAATCTGGGGACCAACAGCTACATCTTTTAAGACCGAATGTGATGTGGTGGGAACATTTGGTTATCTTGCTCCCGAATATTTCATGTATGGAAAAATCAGTGACAAGATTGATGTCTATGCCTTTGGCGTGGTCCTGCTAGAATTATTATCAGGAAGAAAACCAATTGGCTCCGAGACACCAAAAGAACAAGAAAGCTTGGTCATGTGGGCAAAGCCGAAAATAGAGAAAGGTGATGTAAAAGAAATACTGGATCCAAATTTGGATGGAAAGTTGATGAGGTTCAGGTGCTGA

Protein Analysis

587

Amino Acids

64.88

Weight (kDa)

8.08

Isoelectric Point (pI)

41.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 344 - 555 2.7e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 346 - 552 2.3e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 280
AccBSI CCGCTC 1 cut(s) 825
AccI GTMKAC 1 cut(s) 1071
AciI CCGC 5 cut(s) 396, 578, 774, 823, 1445
AclI AACGTT 1 cut(s) 1227
AclWI GGATC 2 cut(s) 1715, 1728
AcoI YGGCCR 1 cut(s) 330
AcsI RAATTY 4 cut(s) 389, 560, 1276, 1726
AcuI CTGAAG 2 cut(s) 1017, 1199
AdeI CACNNNGTG 1 cut(s) 698
AfaI GTAC 1 cut(s) 850
AfiI CCNNNNNNNGG 2 cut(s) 780, 1205
AflIII ACRYGT 2 cut(s) 709, 786
AgsI TTSAA 2 cut(s) 1017, 1442
AjnI CCWGG 1 cut(s) 779
AjuI GAANNNNNNNTTGG 2 cut(s) 47, 79
AleI CACNNNNGTG 1 cut(s) 642
Alw21I GWGCWC 3 cut(s) 95, 258, 467
Alw26I GTCTC 5 cut(s) 187, 500, 539, 843, 1637
Alw44I GTGCAC 1 cut(s) 463
AlwI GGATC 2 cut(s) 1715, 1728
AlwNI CAGNNNCTG 1 cut(s) 1758
Ama87I CYCGRG 1 cut(s) 1205
AoxI GGCC 3 cut(s) 330, 731, 1462
ApaLI GTGCAC 1 cut(s) 463
ApeKI GCWGC 2 cut(s) 152, 701
ApoI RAATTY 4 cut(s) 389, 560, 1276, 1726
ArsI GACNNNNNNTTYG 2 cut(s) 504, 536
Asp700I GAANNNNTTC 2 cut(s) 1084, 1145
AspS9I GGNCC 4 cut(s) 410, 732, 1478, 1600
AsuC2I CCSGG 1 cut(s) 135
AsuHPI GGTGA 6 cut(s) 578, 817, 899, 1333, 1420, 1712
AsuII TTCGAA 3 cut(s) 632, 742, 873
AvaI CYCGRG 1 cut(s) 1205
AvaII GGWCC 3 cut(s) 410, 1478, 1600
AxyI CCTNAGG 1 cut(s) 1257
BaeGI GKGCMC 1 cut(s) 467
BalI TGGCCA 1 cut(s) 332
BamHI GGATCC 1 cut(s) 1720
BanII GRGCYC 3 cut(s) 115, 258, 620
BbsI GAAGAC 2 cut(s) 510, 654
Bbv12I GWGCWC 3 cut(s) 95, 258, 467
BbvI GCAGC 2 cut(s) 164, 713
BccI CCATC 7 cut(s) 102, 200, 620, 908, 981, 1085, 1727
BceAI ACGGC 1 cut(s) 399
BciT130I CCWGG 1 cut(s) 781
BciVI GTATCC 2 cut(s) 542, 574
BcnI CCSGG 1 cut(s) 135
BcoDI GTCTC 5 cut(s) 187, 500, 539, 843, 1637
BfaI CTAG 3 cut(s) 299, 623, 1607
BfuI GTATCC 2 cut(s) 542, 574
BisI GCNGC 2 cut(s) 153, 702
BlsI GCNGC 2 cut(s) 154, 703
Bme1390I CCNGG 2 cut(s) 135, 781
Bme18I GGWCC 3 cut(s) 410, 1478, 1600
BmeT110I CYCGRG 1 cut(s) 1205
BmgT120I GGNCC 4 cut(s) 410, 732, 1478, 1600
BmiI GGNNCC 6 cut(s) 411, 619, 734, 1479, 1639, 1722
BmrFI CCNGG 2 cut(s) 135, 781
BmsI GCATC 4 cut(s) 441, 964, 1049, 1224
BpiI GAAGAC 2 cut(s) 510, 654
BplI GAGNNNNNCTC 2 cut(s) 523, 555
Bpu14I TTCGAA 3 cut(s) 632, 742, 873
BpuEI CTTGAG 1 cut(s) 29
BpuMI CCSGG 1 cut(s) 135
BsaAI YACGTR 1 cut(s) 214
BsaBI GATNNNNATC 1 cut(s) 553
BsaI GGTCTC 1 cut(s) 500
BsaJI CCNNGG 4 cut(s) 327, 677, 724, 780
BsaXI ACNNNNNCTCC 2 cut(s) 129, 159
Bsc4I CCNNNNNNNGG 2 cut(s) 780, 1205
Bse1I ACTGG 3 cut(s) 1100, 1388, 1722
Bse21I CCTNAGG 1 cut(s) 1257
Bse3DI GCAATG 1 cut(s) 806
Bse8I GATNNNNATC 1 cut(s) 553
BseBI CCWGG 1 cut(s) 781
BseDI CCNNGG 4 cut(s) 327, 677, 724, 780
BseGI GGATG 7 cut(s) 113, 211, 432, 919, 1064, 1124, 1738
BseJI GATNNNNATC 1 cut(s) 553
BseLI CCNNNNNNNGG 2 cut(s) 780, 1205
BseMI GCAATG 1 cut(s) 806
BseMII CTCAG 2 cut(s) 857, 1372
BseNI ACTGG 3 cut(s) 1100, 1388, 1722
BseRI GAGGAG 2 cut(s) 26, 831
BseSI GKGCMC 1 cut(s) 467
BseXI GCAGC 2 cut(s) 164, 713
BseYI CCCAGC 1 cut(s) 129
BsgI GTGCAG 1 cut(s) 720
BshFI GGCC 3 cut(s) 332, 733, 1464
BsiHKAI GWGCWC 3 cut(s) 95, 258, 467
BsiHKCI CYCGRG 1 cut(s) 1205
BsiSI CCGG 1 cut(s) 135
BslFI GGGAC 4 cut(s) 38, 423, 797, 1491
BslI CCNNNNNNNGG 2 cut(s) 780, 1205
BsmAI GTCTC 5 cut(s) 187, 500, 539, 843, 1637
BsmFI GGGAC 4 cut(s) 38, 423, 797, 1491
BsnI GGCC 3 cut(s) 332, 733, 1464
Bso31I GGTCTC 1 cut(s) 500
BsoBI CYCGRG 1 cut(s) 1205
Bsp119I TTCGAA 3 cut(s) 632, 742, 873
Bsp1286I GDGCHC 5 cut(s) 95, 115, 258, 467, 620
Bsp1407I TGTACA 1 cut(s) 848
Bsp143I GATC 2 cut(s) 683, 1720
BspACI CCGC 5 cut(s) 396, 578, 774, 823, 1445
BspANI GGCC 3 cut(s) 332, 733, 1464
BspCNI CTCAG 2 cut(s) 856, 1371
BspHI TCATGA 1 cut(s) 997
BspLI GGNNCC 6 cut(s) 411, 619, 734, 1479, 1639, 1722
BspPI GGATC 2 cut(s) 1715, 1728
BspQI GCTCTTC 1 cut(s) 739
BspT104I TTCGAA 3 cut(s) 632, 742, 873
BspTNI GGTCTC 1 cut(s) 500
BsrBI CCGCTC 1 cut(s) 825
BsrDI GCAATG 1 cut(s) 806
BsrGI TGTACA 1 cut(s) 848
BsrI ACTGG 3 cut(s) 1100, 1388, 1722
BssECI CCNNGG 4 cut(s) 327, 677, 724, 780
BssMI GATC 2 cut(s) 683, 1720
BssT1I CCWWGG 2 cut(s) 677, 724
Bst2UI CCWGG 1 cut(s) 781
Bst4CI ACNGT 2 cut(s) 328, 641
Bst6I CTCTTC 1 cut(s) 739
BstAUI TGTACA 1 cut(s) 848
BstBAI YACGTR 1 cut(s) 214
BstBI TTCGAA 3 cut(s) 632, 742, 873
BstC8I GCNNGC 2 cut(s) 731, 815
BstDEI CTNAG 4 cut(s) 843, 1257, 1267, 1358
BstDSI CCRYGG 1 cut(s) 327
BstF5I GGATG 7 cut(s) 113, 211, 432, 919, 1064, 1124, 1738
BstKTI GATC 2 cut(s) 686, 1723
BstMAI GTCTC 5 cut(s) 187, 500, 539, 843, 1637
BstMBI GATC 2 cut(s) 683, 1720
BstMWI GCNNNNNNNGC 1 cut(s) 755
BstNI CCWGG 1 cut(s) 781
BstNSI RCATGY 2 cut(s) 713, 790
BstSCI CCNGG 2 cut(s) 133, 779
BstSLI GKGCMC 1 cut(s) 467
BstSNI TACGTA 1 cut(s) 214
BstV1I GCAGC 2 cut(s) 164, 713
BstV2I GAAGAC 2 cut(s) 510, 654
BstX2I RGATCY 1 cut(s) 1720
BstYI RGATCY 1 cut(s) 1720
Bsu36I CCTNAGG 1 cut(s) 1257
BsuI GTATCC 2 cut(s) 542, 574
BsuRI GGCC 3 cut(s) 332, 733, 1464
BtgI CCRYGG 1 cut(s) 327
BtsCI GGATG 7 cut(s) 113, 211, 432, 919, 1064, 1124, 1738
BtsI GCAGTG 1 cut(s) 1113
BtsIMutI CAGTG 6 cut(s) 417, 851, 1107, 1113, 1149, 1573
Cac8I GCNNGC 2 cut(s) 731, 815
CaiI CAGNNNCTG 1 cut(s) 1758
CciI TCATGA 1 cut(s) 997
Cfr13I GGNCC 4 cut(s) 410, 732, 1478, 1600
Csp6I GTAC 1 cut(s) 849
CspCI CAANNNNNGTGG 2 cut(s) 406, 441
CviQI GTAC 1 cut(s) 849
DdeI CTNAG 4 cut(s) 843, 1257, 1267, 1358
DpnI GATC 2 cut(s) 685, 1722
DpnII GATC 2 cut(s) 683, 1720
DraIII CACNNNGTG 1 cut(s) 698
DrdI GACNNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 1 cut(s) 330
Eam1104I CTCTTC 1 cut(s) 739
EarI CTCTTC 1 cut(s) 739
EciI GGCGGA 1 cut(s) 593
Ecl136II GAGCTC 1 cut(s) 256
Eco105I TACGTA 1 cut(s) 214
Eco130I CCWWGG 2 cut(s) 677, 724
Eco24I GRGCYC 3 cut(s) 115, 258, 620
Eco31I GGTCTC 1 cut(s) 500
Eco32I GATATC 1 cut(s) 1165
Eco47I GGWCC 3 cut(s) 410, 1478, 1600
Eco53kI GAGCTC 1 cut(s) 256
Eco57I CTGAAG 2 cut(s) 1017, 1199
Eco81I CCTNAGG 1 cut(s) 1257
Eco88I CYCGRG 1 cut(s) 1205
EcoICRI GAGCTC 1 cut(s) 256
EcoRII CCWGG 1 cut(s) 779
EcoRV GATATC 1 cut(s) 1165
EcoT14I CCWWGG 2 cut(s) 677, 724
EcoT38I GRGCYC 3 cut(s) 115, 258, 620
ErhI CCWWGG 2 cut(s) 677, 724
FalI AAGNNNNNCTT 2 cut(s) 1250, 1282
FaqI GGGAC 4 cut(s) 38, 423, 797, 1491
FauI CCCGC 1 cut(s) 781
FblI GTMKAC 1 cut(s) 1071
Fnu4HI GCNGC 2 cut(s) 153, 702
FokI GGATG 7 cut(s) 120, 218, 419, 926, 1071, 1111, 1745
FriOI GRGCYC 3 cut(s) 115, 258, 620
Fsp4HI GCNGC 2 cut(s) 153, 702
FspBI CTAG 3 cut(s) 299, 623, 1607
GluI GCNGC 2 cut(s) 153, 702
GsaI CCCAGC 1 cut(s) 133
HaeIII GGCC 3 cut(s) 332, 733, 1464
HapII CCGG 1 cut(s) 135
HindIII AAGCTT 3 cut(s) 1011, 1264, 1663
HinfI GANTC 3 cut(s) 73, 377, 532
HpaII CCGG 1 cut(s) 135
HphI GGTGA 6 cut(s) 578, 817, 899, 1333, 1420, 1712
Hpy166II GTNNAC 3 cut(s) 465, 849, 1072
Hpy188III TCNNGA 7 cut(s) 184, 271, 941, 998, 1048, 1541, 1620
Hpy8I GTNNAC 3 cut(s) 465, 849, 1072
HpyAV CCTTC 3 cut(s) 273, 453, 1135
HpyCH4III ACNGT 2 cut(s) 328, 641
HpyCH4IV ACGT 2 cut(s) 213, 1227
HpyCH4V TGCA 8 cut(s) 152, 465, 701, 799, 984, 1062, 1215, 1469
HpyF10VI GCNNNNNNNGC 1 cut(s) 755
HpyF3I CTNAG 4 cut(s) 843, 1257, 1267, 1358
HpySE526I ACGT 2 cut(s) 213, 1227
Kzo9I GATC 2 cut(s) 683, 1720
LguI GCTCTTC 1 cut(s) 739
LmnI GCTCC 5 cut(s) 253, 623, 966, 1543, 1643
Lsp1109I GCAGC 2 cut(s) 164, 713
LweI GCATC 4 cut(s) 441, 964, 1049, 1224
MaeI CTAG 3 cut(s) 299, 623, 1607
MaeII ACGT 2 cut(s) 213, 1227
MaeIII GTNAC 5 cut(s) 209, 236, 566, 887, 1568
MalI GATC 2 cut(s) 685, 1722
MbiI CCGCTC 1 cut(s) 825
MboI GATC 2 cut(s) 683, 1720
MfeI CAATTG 2 cut(s) 78, 1632
MflI RGATCY 1 cut(s) 1720
MhlI GDGCHC 5 cut(s) 95, 115, 258, 467, 620
MlsI TGGCCA 1 cut(s) 332
MluNI TGGCCA 1 cut(s) 332
MlyI GAGTC 1 cut(s) 541
MmeI TCCRAC 1 cut(s) 183
Mox20I TGGCCA 1 cut(s) 332
MroXI GAANNNNTTC 2 cut(s) 1084, 1145
MscI TGGCCA 1 cut(s) 332
MseI TTAA 5 cut(s) 120, 717, 950, 1329, 1497
MslI CAYNNNNRTG 3 cut(s) 642, 791, 1401
Msp20I TGGCCA 1 cut(s) 332
MspI CCGG 1 cut(s) 135
MspR9I CCNGG 2 cut(s) 135, 781
MunI CAATTG 2 cut(s) 78, 1632
MvaI CCWGG 1 cut(s) 781
MwoI GCNNNNNNNGC 1 cut(s) 755
NciI CCSGG 1 cut(s) 135
NdeII GATC 2 cut(s) 683, 1720
NlaIV GGNNCC 6 cut(s) 411, 619, 734, 1479, 1639, 1722
NmuCI GTSAC 4 cut(s) 236, 566, 887, 1568
NspI RCATGY 2 cut(s) 713, 790
NspV TTCGAA 3 cut(s) 632, 742, 873
OliI CACNNNNGTG 1 cut(s) 642
PagI TCATGA 1 cut(s) 997
PciI ACATGT 2 cut(s) 709, 786
PciSI GCTCTTC 1 cut(s) 739
PdmI GAANNNNTTC 2 cut(s) 1084, 1145
PfeI GAWTC 2 cut(s) 73, 377
PflFI GACNNNGTC 1 cut(s) 516
PkrI GCNGC 2 cut(s) 154, 703
PleI GAGTC 1 cut(s) 540
PpsI GAGTC 1 cut(s) 540
Ppu21I YACGTR 1 cut(s) 214
PscI ACATGT 2 cut(s) 709, 786
Psp124BI GAGCTC 1 cut(s) 258
Psp1406I AACGTT 1 cut(s) 1227
Psp6I CCWGG 1 cut(s) 779
PspFI CCCAGC 1 cut(s) 129
PspGI CCWGG 1 cut(s) 779
PspN4I GGNNCC 6 cut(s) 411, 619, 734, 1479, 1639, 1722
PspPI GGNCC 4 cut(s) 410, 732, 1478, 1600
PstNI CAGNNNCTG 1 cut(s) 1758
PsuI RGATCY 1 cut(s) 1720
PsyI GACNNNGTC 1 cut(s) 516
RsaI GTAC 1 cut(s) 850
RsaNI GTAC 1 cut(s) 849
RseI CAYNNNNRTG 3 cut(s) 642, 791, 1401
SacI GAGCTC 1 cut(s) 258
SapI GCTCTTC 1 cut(s) 739
SaqAI TTAA 5 cut(s) 120, 717, 950, 1329, 1497
SatI GCNGC 2 cut(s) 153, 702
Sau3AI GATC 2 cut(s) 683, 1720
Sau96I GGNCC 4 cut(s) 410, 732, 1478, 1600
SchI GAGTC 1 cut(s) 541
ScrFI CCNGG 2 cut(s) 135, 781
SduI GDGCHC 5 cut(s) 95, 115, 258, 467, 620
SfaNI GCATC 4 cut(s) 441, 964, 1049, 1224
SfuI TTCGAA 3 cut(s) 632, 742, 873
SinI GGWCC 3 cut(s) 410, 1478, 1600
SmiMI CAYNNNNRTG 3 cut(s) 642, 791, 1401
SmlI CTYRAG 1 cut(s) 8
SmoI CTYRAG 1 cut(s) 8
SnaBI TACGTA 1 cut(s) 214
SsiI CCGC 5 cut(s) 396, 578, 774, 823, 1445
SspI AATATT 1 cut(s) 1547
SspMI CTAG 3 cut(s) 299, 623, 1607
SstI GAGCTC 1 cut(s) 258
StyD4I CCNGG 2 cut(s) 133, 779
StyI CCWWGG 2 cut(s) 677, 724
TaaI ACNGT 2 cut(s) 328, 641
TaiI ACGT 2 cut(s) 216, 1230
TaqI TCGA 6 cut(s) 166, 185, 632, 742, 873, 1161
TaqII GACCGA 1 cut(s) 1517
TatI WGTACW 1 cut(s) 848
TfiI GAWTC 2 cut(s) 73, 377
Tru1I TTAA 5 cut(s) 120, 717, 950, 1329, 1497
Tru9I TTAA 5 cut(s) 120, 717, 950, 1329, 1497
TscAI CASTG 6 cut(s) 424, 851, 1107, 1113, 1156, 1573
TseFI GTSAC 4 cut(s) 236, 566, 887, 1568
TseI GCWGC 2 cut(s) 152, 701
Tsp45I GTSAC 4 cut(s) 236, 566, 887, 1568
TspDTI ATGAA 6 cut(s) 257, 675, 1133, 1170, 1385, 1540
TspGWI ACGGA 1 cut(s) 858
TspRI CASTG 6 cut(s) 424, 851, 1107, 1113, 1156, 1573
Tth111I GACNNNGTC 1 cut(s) 516
VneI GTGCAC 1 cut(s) 463
VpaK11BI GGWCC 3 cut(s) 410, 1478, 1600
XapI RAATTY 4 cut(s) 389, 560, 1276, 1726
XceI RCATGY 2 cut(s) 713, 790
XcmI CCANNNNNNNNNTGG 2 cut(s) 199, 424
XmiI GTMKAC 1 cut(s) 1071
XmnI GAANNNNTTC 2 cut(s) 1084, 1145
XspI CTAG 3 cut(s) 299, 623, 1607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.