Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001023

Physical Location & Seq

Genomic Coordinates Reverse (-)

2381440 .. 2384418

Gene Structure 2979 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G001530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGATACTTGAGGAGGTATTCAAGGATTTCAAGAAGAACAAGAAGAATAATAATAAGAAGAATGTGGTCTTGGTTGGGATTAAAATTGATGACCAAAGCAGAGAGCTTCTTGGATGGGCTCTCGCGAAAGCTGCTGAAGCCGGAGACTGCGTTATTGCGGTTCATGTCTGCCGAAGTTCTGATCAATCCGTGAAGGACAAGCCAATAGTGGATAGTTATGTAGAGGCTTTTGAAGGGTTATGTAATATAAAAAAGGTAGACCTCATCAGTCAGGTATTGATAGGAAGCTCAATCCGAAAGGCGCTAGTGAAAGAGGCAAAGAACCATGAAACTATGGCTGTAGTTGTAGGCACAAGCAAGCCAAGCCAAGGGTTTAAGGATTCTACGGCGAAATACTGTGCTAAGAAATTGCCTCCAAGCACAGATGTGGTGGCAATCAGCAAGGGGGAAATTGTATACAGAAGATGTACAAGTAATGAACAATCAGGTCTAGCAGGTGATGAGCCAAGGCCAAGTATGAGTCAGATTTATAATTGTATTCCTAGAGGAAAAAGCCAATCTGAATTTGGTGACTCTGAGGCGGATACAGAAACTGTTAAATCATTTTCTGATAAGGCTGAGAGCTCCCAAGCTAGTCCTATGCGTGACAATGAAGACCTGAAGAAAGAGCATAAAAGAGCTCATAACAGATCAGCTTCTTCACTTAGTATAGGAGAGTCAGCAGAGAATTCTGTGAGTAAACAAATCCCGGGCACAAGGAACATGTCTGTGGTGCAATGGGTGATGAGCTTACCAGATCGTTCTCCACAGCAGTCTCCTCAATGTTCAATCATAAGAGAAACTTCCTTTGAAGAAGGTATCAAGAGTACTTCTTCTGATTTGGATGCGCTACCGAATGAGTTAAAGAGTCTCCTGAAAACAAATCGTTGCAAATGGTTCAGTCACGAGGTTCTGAAAACTGCAACTTCAAATTTCTCTTCAGAAAATCTTATTGGGAAAGGAGGATGCAACCTTGTGTTCAAGGGAATTCTACCAGATGGCAAGAAAGTGGCAGTAAAGCTTATGAAGTCTTCCAAAGCAAAGTGGAAGGATTTTGCTCATGAAGTCGACATCATCTCCTTGAGCAATGTTCTAATATCTGTTTATGATTTCTCGCCTAAAGGAAGCTTAGAGGAGAATTTACATGGCAAGAATAAAGGAAAACCTGTATTGTCATGGGAAGTGAGATTCAAAGCTGCTGTTGGGATTGCTGAAGCTCTAAATTACCTGCACAACGAATGTTCTCCACCAGTTATTCATAGAGATGTCAAGTCTTCAAACATTCTGCTGACACCAGAGCTAGAACCACGGTTATCTGATTTCGGCCTTGCAATATGGGGACCAACAACTACGCCTTCTCTGACTGAATGCACTGTAGTGGGAACATTTGGTTATCTTGCCCCTGAATATTTCATGTATGGAAAAATCAGTGACAAGATTGATGTCTATGCCTTTGGTGTAGTCCTGCTTGAACTATTATCAGGAAGAACACCTATTGGCTCTGACACTAACAAACAGCAAGAGAGCTTGGTCATGTGGGCAAAGCCTAAACTAGAGAATGGAGATGTACATGACATACTGGATCCAAATTTCGATGGAAAGTTTGATGAGATTCAGGTACTGAGAGTGGTTGAAGCAGCAAAACTCTGCATCACACGCTCAGCTAGGCTTCGCCCTAAAATGAGTCAGATAGTGAAGCTCCTAAAAGGGGATCCAGATGTGGAAACGTATGTGAACCCTCCATATTTTGATGTCGAGGATTCAGAAAACCTTGATGACAATGATGATGAAGTTTATCCAAGTTCAAGTGCAGAGTTACATTTGAACCTTGCACTGCTTGATGTTGACGATGATGATACAACATCATTCAGTAGTGTGGAGCAGAGCAACCGTTCTTGGGAAGAATATTTGAAAGGTGGATGGAGCAGATCATCAAGCTTTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Usp

Protein Analysis

661

Amino Acids

73.07

Weight (kDa)

5.69

Isoelectric Point (pI)

43.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	23 - 138	1.5e-06	Universal stress protein family
Pkinase	PF00069	326 - 522	1.2e-28	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	329 - 580	7.2e-24	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16750 AT2G16750 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030
fragaria_vesca	FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g38170 FvH4_2g38170
malus_domestica	MD05G1121300.v1.1 MD08G1010200.v1.1 MD15G1010100.v1.1
prunus_persica	Prupe.1G362600_v2.0.a1 Prupe.8G165200_v2.0.a1 Prupe.8G165200_v2.0.a1
pyrus_communis	pycom05g11550 pycom10g10680 pycom15g00830
rosa_chinensis	RchiOBHm_Chr6g0251891 RchiOBHm_Chr6g0303311
rosa_laevigata	RLG00000011093 RLG00000015422
rosa_multiflora	Rmu_sc0007252.1_g000005 Rmu_sc0027227.1_g000001 Rmu_ssc0000303.1_g000011
rosa_roxburghii	Rroxscaffold_7G00164880 Rroxscaffold_7G00216330
rosa_rugosa	Rorug05G0504900 Rorug05G0504900 Rorug06G0320200 Rorug06G0320300 Rorug06G0320300 Rorug06G0320300 Rorug06G0320300
rosa_samantha	Rh6AG016000 Rh6AG434700 Rh6BG014000 Rh6BG468400 Rh6CG010900 Rh6CG446700 Rh6DG012100 Rh6DG433500
rosa_wichuraiana	Rw6G001530 Rw6G037640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	531
AarI	CACCTGC	1 cut(s)	485
Acc36I	ACCTGC	2 cut(s)	485, 1275
AccI	GTMKAC	3 cut(s)	258, 456, 1107
AccII	CGCG	1 cut(s)	125
AciI	CCGC	2 cut(s)	158, 581
AclWI	GGATC	4 cut(s)	1616, 1629, 1745, 1758
AcsI	RAATTY	6 cut(s)	563, 727, 970, 1026, 1177, 1627
AcuI	CTGAAG	4 cut(s)	156, 680, 963, 1272
AfaI	GTAC	4 cut(s)	469, 868, 1608, 1659
AfiI	CCNNNNNNNGG	3 cut(s)	368, 1747, 1936
AflIII	ACRYGT	1 cut(s)	762
AjuI	GAANNNNNNNTTGG	4 cut(s)	53, 85, 975, 1007
AleI	CACNNNNGTG	2 cut(s)	425, 1415
Alw21I	GWGCWC	2 cut(s)	626, 682
Alw26I	GTCTC	3 cut(s)	138, 819, 914
AlwI	GGATC	4 cut(s)	1616, 1629, 1745, 1758
AlwNI	CAGNNNCTG	2 cut(s)	593, 1660
Ama87I	CYCGRG	1 cut(s)	748
AoxI	GGCC	2 cut(s)	509, 1363
ApeKI	GCWGC	3 cut(s)	131, 1235, 1676
ApoI	RAATTY	6 cut(s)	563, 727, 970, 1026, 1177, 1627
AspLEI	GCGC	2 cut(s)	304, 889
AspS9I	GGNCC	1 cut(s)	1379
AsuC2I	CCSGG	2 cut(s)	749, 750
AsuHPI	GGTGA	3 cut(s)	509, 581, 793
AvaI	CYCGRG	1 cut(s)	748
AvaII	GGWCC	1 cut(s)	1379
BaeGI	GKGCMC	1 cut(s)	755
BamHI	GGATCC	2 cut(s)	1621, 1750
BanII	GRGCYC	3 cut(s)	121, 626, 682
BauI	CACGAG	1 cut(s)	944
BbsI	GAAGAC	3 cut(s)	660, 1062, 1305
Bbv12I	GWGCWC	2 cut(s)	626, 682
BbvI	GCAGC	3 cut(s)	118, 1222, 1688
BccI	CCATC	4 cut(s)	108, 1031, 1628, 1953
BceAI	ACGGC	1 cut(s)	402
BciVI	GTATCC	1 cut(s)	577
BclI	TGATCA	1 cut(s)	181
BcnI	CCSGG	2 cut(s)	749, 750
BcoDI	GTCTC	3 cut(s)	138, 819, 914
BfaI	CTAG	7 cut(s)	305, 491, 543, 633, 1340, 1592, 1704
BfmI	CTRYAG	2 cut(s)	339, 1413
BfoI	RGCGCY	1 cut(s)	305
BfuAI	ACCTGC	2 cut(s)	485, 1275
BfuI	GTATCC	1 cut(s)	577
BisI	GCNGC	3 cut(s)	132, 1236, 1677
BlpI	GCTNAGC	1 cut(s)	1699
BlsI	GCNGC	3 cut(s)	133, 1237, 1678
BmcAI	AGTACT	1 cut(s)	868
Bme1390I	CCNGG	2 cut(s)	749, 750
Bme18I	GGWCC	1 cut(s)	1379
BmeT110I	CYCGRG	1 cut(s)	748
BmgT120I	GGNCC	1 cut(s)	1379
BmiI	GGNNCC	3 cut(s)	1380, 1623, 1752
BmrFI	CCNGG	2 cut(s)	749, 750
BmsI	GCATC	3 cut(s)	874, 995, 1698
BpiI	GAAGAC	3 cut(s)	660, 1062, 1305
Bpu1102I	GCTNAGC	1 cut(s)	1699
BpuEI	CTTGAG	2 cut(s)	29, 1141
BpuMI	CCSGG	2 cut(s)	749, 750
BsaJI	CCNNGG	4 cut(s)	367, 506, 748, 1346
BsaXI	ACNNNNNCTCC	4 cut(s)	135, 165, 1100, 1130
Bsc4I	CCNNNNNNNGG	3 cut(s)	368, 1747, 1936
Bse1I	ACTGG	2 cut(s)	1289, 1623
Bse3DI	GCAATG	2 cut(s)	782, 1132
BseDI	CCNNGG	4 cut(s)	367, 506, 748, 1346
BseGI	GGATG	4 cut(s)	119, 889, 1010, 1964
BseLI	CCNNNNNNNGG	3 cut(s)	368, 1747, 1936
BseMI	GCAATG	2 cut(s)	782, 1132
BseMII	CTCAG	4 cut(s)	567, 609, 1652, 1713
BseNI	ACTGG	2 cut(s)	1289, 1623
BseRI	GAGGAG	3 cut(s)	26, 807, 1187
BseSI	GKGCMC	1 cut(s)	755
BseXI	GCAGC	3 cut(s)	118, 1222, 1688
BsgI	GTGCAG	2 cut(s)	1253, 1869
Bsh1236I	CGCG	1 cut(s)	125
BshFI	GGCC	2 cut(s)	511, 1365
BsiHKAI	GWGCWC	2 cut(s)	626, 682
BsiHKCI	CYCGRG	1 cut(s)	748
BsiSI	CCGG	2 cut(s)	141, 749
BslFI	GGGAC	1 cut(s)	1392
BslI	CCNNNNNNNGG	3 cut(s)	368, 1747, 1936
BsmAI	GTCTC	3 cut(s)	138, 819, 914
BsmFI	GGGAC	1 cut(s)	1392
BsmI	GAATGC	1 cut(s)	1412
BsnI	GGCC	2 cut(s)	511, 1365
BsoBI	CYCGRG	1 cut(s)	748
Bsp1286I	GDGCHC	4 cut(s)	121, 626, 682, 755
Bsp1407I	TGTACA	2 cut(s)	467, 1606
Bsp143I	GATC	6 cut(s)	181, 689, 796, 1621, 1750, 1967
Bsp1720I	GCTNAGC	1 cut(s)	1699
Bsp68I	TCGCGA	1 cut(s)	125
BspACI	CCGC	2 cut(s)	158, 581
BspANI	GGCC	2 cut(s)	511, 1365
BspCNI	CTCAG	4 cut(s)	568, 610, 1653, 1712
BspFNI	CGCG	1 cut(s)	125
BspHI	TCATGA	1 cut(s)	1099
BspLI	GGNNCC	3 cut(s)	1380, 1623, 1752
BspMI	ACCTGC	2 cut(s)	485, 1275
BspPI	GGATC	4 cut(s)	1616, 1629, 1745, 1758
BsrDI	GCAATG	2 cut(s)	782, 1132
BsrGI	TGTACA	2 cut(s)	467, 1606
BsrI	ACTGG	2 cut(s)	1289, 1623
BssECI	CCNNGG	4 cut(s)	367, 506, 748, 1346
BssMI	GATC	6 cut(s)	181, 689, 796, 1621, 1750, 1967
BssNAI	GTATAC	1 cut(s)	457
BssSI	CACGAG	1 cut(s)	944
BssT1I	CCWWGG	2 cut(s)	367, 506
Bst1107I	GTATAC	1 cut(s)	457
Bst2BI	CACGAG	1 cut(s)	944
Bst4CI	ACNGT	5 cut(s)	398, 595, 1350, 1414, 1931
Bst6I	CTCTTC	1 cut(s)	982
BstAUI	TGTACA	2 cut(s)	467, 1606
BstC8I	GCNNGC	1 cut(s)	359
BstDEI	CTNAG	7 cut(s)	402, 576, 618, 704, 1168, 1661, 1699
BstDSI	CCRYGG	1 cut(s)	1346
BstF5I	GGATG	4 cut(s)	119, 889, 1010, 1964
BstFNI	CGCG	1 cut(s)	125
BstH2I	RGCGCY	1 cut(s)	305
BstHHI	GCGC	2 cut(s)	304, 889
BstKTI	GATC	6 cut(s)	184, 692, 799, 1624, 1753, 1970
BstMAI	GTCTC	3 cut(s)	138, 819, 914
BstMBI	GATC	6 cut(s)	181, 689, 796, 1621, 1750, 1967
BstMWI	GCNNNNNNNGC	4 cut(s)	131, 137, 363, 1695
BstNSI	RCATGY	1 cut(s)	766
BstSCI	CCNGG	2 cut(s)	747, 748
BstSFI	CTRYAG	2 cut(s)	339, 1413
BstSLI	GKGCMC	1 cut(s)	755
BstUI	CGCG	1 cut(s)	125
BstV1I	GCAGC	3 cut(s)	118, 1222, 1688
BstV2I	GAAGAC	3 cut(s)	660, 1062, 1305
BstX2I	RGATCY	2 cut(s)	1621, 1750
BstYI	RGATCY	2 cut(s)	1621, 1750
BstZ17I	GTATAC	1 cut(s)	457
BsuI	GTATCC	1 cut(s)	577
BsuRI	GGCC	2 cut(s)	511, 1365
BtgI	CCRYGG	1 cut(s)	1346
BtsCI	GGATG	4 cut(s)	119, 889, 1010, 1964
BtsI	GCAGTG	1 cut(s)	1871
BtsIMutI	CAGTG	3 cut(s)	1410, 1474, 1871
BtuMI	TCGCGA	1 cut(s)	125
BveI	ACCTGC	2 cut(s)	485, 1275
Cac8I	GCNNGC	1 cut(s)	359
CaiI	CAGNNNCTG	2 cut(s)	593, 1660
CciI	TCATGA	1 cut(s)	1099
CfoI	GCGC	2 cut(s)	304, 889
Cfr13I	GGNCC	1 cut(s)	1379
Cfr9I	CCCGGG	1 cut(s)	748
Csp6I	GTAC	4 cut(s)	468, 867, 1607, 1658
CviAII	CATG	9 cut(s)	164, 326, 763, 1100, 1184, 1215, 1453, 1573, 1610
CviQI	GTAC	4 cut(s)	468, 867, 1607, 1658
DdeI	CTNAG	7 cut(s)	402, 576, 618, 704, 1168, 1661, 1699
DpnI	GATC	6 cut(s)	183, 691, 798, 1623, 1752, 1969
DpnII	GATC	6 cut(s)	181, 689, 796, 1621, 1750, 1967
Eam1104I	CTCTTC	1 cut(s)	982
EarI	CTCTTC	1 cut(s)	982
EciI	GGCGGA	1 cut(s)	596
Ecl136II	GAGCTC	2 cut(s)	624, 680
Eco130I	CCWWGG	2 cut(s)	367, 506
Eco24I	GRGCYC	3 cut(s)	121, 626, 682
Eco47I	GGWCC	1 cut(s)	1379
Eco53kI	GAGCTC	2 cut(s)	624, 680
Eco57I	CTGAAG	4 cut(s)	156, 680, 963, 1272
Eco88I	CYCGRG	1 cut(s)	748
EcoICRI	GAGCTC	2 cut(s)	624, 680
EcoRI	GAATTC	2 cut(s)	727, 1026
EcoT14I	CCWWGG	2 cut(s)	367, 506
EcoT38I	GRGCYC	3 cut(s)	121, 626, 682
ErhI	CCWWGG	2 cut(s)	367, 506
FaeI	CATG	9 cut(s)	167, 329, 766, 1103, 1187, 1218, 1456, 1576, 1613
FalI	AAGNNNNNCTT	2 cut(s)	826, 858
FaqI	GGGAC	1 cut(s)	1392
FatI	CATG	9 cut(s)	163, 325, 762, 1099, 1183, 1214, 1452, 1572, 1609
FbaI	TGATCA	1 cut(s)	181
FblI	GTMKAC	3 cut(s)	258, 456, 1107
Fnu4HI	GCNGC	3 cut(s)	132, 1236, 1677
FokI	GGATG	4 cut(s)	126, 896, 1017, 1971
FriOI	GRGCYC	3 cut(s)	121, 626, 682
Fsp4HI	GCNGC	3 cut(s)	132, 1236, 1677
FspBI	CTAG	7 cut(s)	305, 491, 543, 633, 1340, 1592, 1704
GlaI	GCGC	2 cut(s)	303, 888
GluI	GCNGC	3 cut(s)	132, 1236, 1677
HaeII	RGCGCY	1 cut(s)	305
HaeIII	GGCC	2 cut(s)	511, 1365
HapII	CCGG	2 cut(s)	141, 749
HhaI	GCGC	2 cut(s)	304, 889
Hin1II	CATG	9 cut(s)	167, 329, 766, 1103, 1187, 1218, 1456, 1576, 1613
Hin6I	GCGC	2 cut(s)	302, 887
HinP1I	GCGC	2 cut(s)	302, 887
HincII	GTYRAC	2 cut(s)	1108, 1885
HindII	GTYRAC	2 cut(s)	1108, 1885
HindIII	AAGCTT	3 cut(s)	1058, 1165, 1975
HinfI	GANTC	9 cut(s)	380, 520, 572, 716, 907, 1227, 1651, 1723, 1799
HpaII	CCGG	2 cut(s)	141, 749
HphI	GGTGA	3 cut(s)	509, 581, 793
Hpy166II	GTNNAC	6 cut(s)	259, 457, 740, 1108, 1774, 1885
Hpy188III	TCNNGA	8 cut(s)	31, 124, 862, 913, 944, 1100, 1521, 1754
Hpy8I	GTNNAC	6 cut(s)	259, 457, 740, 1108, 1774, 1885
HpyAV	CCTTC	5 cut(s)	187, 227, 848, 1081, 1404
HpyCH4III	ACNGT	5 cut(s)	398, 595, 1350, 1414, 1931
HpyCH4IV	ACGT	1 cut(s)	1766
HpyF10VI	GCNNNNNNNGC	4 cut(s)	131, 137, 363, 1695
HpyF3I	CTNAG	7 cut(s)	402, 576, 618, 704, 1168, 1661, 1699
HpySE526I	ACGT	1 cut(s)	1766
Hsp92II	CATG	9 cut(s)	167, 329, 766, 1103, 1187, 1218, 1456, 1576, 1613
HspAI	GCGC	2 cut(s)	302, 887
Ksp22I	TGATCA	1 cut(s)	181
Kzo9I	GATC	6 cut(s)	181, 689, 796, 1621, 1750, 1967
LmnI	GCTCC	4 cut(s)	629, 1743, 1918, 1962
Lsp1109I	GCAGC	3 cut(s)	118, 1222, 1688
LweI	GCATC	3 cut(s)	874, 995, 1698
MaeI	CTAG	7 cut(s)	305, 491, 543, 633, 1340, 1592, 1704
MaeII	ACGT	1 cut(s)	1766
MaeIII	GTNAC	5 cut(s)	569, 644, 941, 1469, 1854
MalI	GATC	6 cut(s)	183, 691, 798, 1623, 1752, 1969
MboI	GATC	6 cut(s)	181, 689, 796, 1621, 1750, 1967
MflI	RGATCY	2 cut(s)	1621, 1750
MhlI	GDGCHC	4 cut(s)	121, 626, 682, 755
MlyI	GAGTC	5 cut(s)	529, 566, 725, 916, 1732
MseI	TTAA	4 cut(s)	81, 375, 597, 902
MslI	CAYNNNNRTG	4 cut(s)	425, 767, 1302, 1415
MspI	CCGG	2 cut(s)	141, 749
MspR9I	CCNGG	2 cut(s)	749, 750
Mva1269I	GAATGC	1 cut(s)	1412
MvnI	CGCG	1 cut(s)	125
MwoI	GCNNNNNNNGC	4 cut(s)	131, 137, 363, 1695
NciI	CCSGG	2 cut(s)	749, 750
NdeII	GATC	6 cut(s)	181, 689, 796, 1621, 1750, 1967
NlaIII	CATG	9 cut(s)	167, 329, 766, 1103, 1187, 1218, 1456, 1576, 1613
NlaIV	GGNNCC	3 cut(s)	1380, 1623, 1752
NmuCI	GTSAC	4 cut(s)	569, 644, 941, 1469
NruI	TCGCGA	1 cut(s)	125
NspI	RCATGY	1 cut(s)	766
OliI	CACNNNNGTG	2 cut(s)	425, 1415
PagI	TCATGA	1 cut(s)	1099
PaqCI	CACCTGC	1 cut(s)	485
PciI	ACATGT	1 cut(s)	762
PctI	GAATGC	1 cut(s)	1412
PfeI	GAWTC	4 cut(s)	380, 1227, 1651, 1799
PkrI	GCNGC	3 cut(s)	133, 1237, 1678
PleI	GAGTC	5 cut(s)	528, 566, 724, 915, 1731
PpsI	GAGTC	5 cut(s)	528, 566, 724, 915, 1731
PscI	ACATGT	1 cut(s)	762
PsiI	TTATAA	1 cut(s)	531
Psp124BI	GAGCTC	2 cut(s)	626, 682
PspN4I	GGNNCC	3 cut(s)	1380, 1623, 1752
PspPI	GGNCC	1 cut(s)	1379
PstNI	CAGNNNCTG	2 cut(s)	593, 1660
PsuI	RGATCY	2 cut(s)	1621, 1750
RruI	TCGCGA	1 cut(s)	125
RsaI	GTAC	4 cut(s)	469, 868, 1608, 1659
RsaNI	GTAC	4 cut(s)	468, 867, 1607, 1658
RseI	CAYNNNNRTG	4 cut(s)	425, 767, 1302, 1415
SacI	GAGCTC	2 cut(s)	626, 682
SalI	GTCGAC	1 cut(s)	1106
SaqAI	TTAA	4 cut(s)	81, 375, 597, 902
SatI	GCNGC	3 cut(s)	132, 1236, 1677
Sau3AI	GATC	6 cut(s)	181, 689, 796, 1621, 1750, 1967
Sau96I	GGNCC	1 cut(s)	1379
ScaI	AGTACT	1 cut(s)	868
SchI	GAGTC	5 cut(s)	529, 566, 725, 916, 1732
ScrFI	CCNGG	2 cut(s)	749, 750
SduI	GDGCHC	4 cut(s)	121, 626, 682, 755
SfaNI	GCATC	3 cut(s)	874, 995, 1698
SfcI	CTRYAG	2 cut(s)	339, 1413
SinI	GGWCC	1 cut(s)	1379
SmaI	CCCGGG	1 cut(s)	750
SmiMI	CAYNNNNRTG	4 cut(s)	425, 767, 1302, 1415
SmlI	CTYRAG	2 cut(s)	8, 1120
SmoI	CTYRAG	2 cut(s)	8, 1120
SsiI	CCGC	2 cut(s)	158, 581
SspI	AATATT	2 cut(s)	1448, 1946
SspMI	CTAG	7 cut(s)	305, 491, 543, 633, 1340, 1592, 1704
SstI	GAGCTC	2 cut(s)	626, 682
StyD4I	CCNGG	2 cut(s)	747, 748
StyI	CCWWGG	2 cut(s)	367, 506
TaaI	ACNGT	5 cut(s)	398, 595, 1350, 1414, 1931
TaiI	ACGT	1 cut(s)	1769
TaqI	TCGA	3 cut(s)	1107, 1632, 1794
TatI	WGTACW	3 cut(s)	467, 866, 1606
TfiI	GAWTC	4 cut(s)	380, 1227, 1651, 1799
Tru1I	TTAA	4 cut(s)	81, 375, 597, 902
Tru9I	TTAA	4 cut(s)	81, 375, 597, 902
TscAI	CASTG	3 cut(s)	1417, 1474, 1878
TseFI	GTSAC	4 cut(s)	569, 644, 941, 1469
TseI	GCWGC	3 cut(s)	131, 1235, 1676
Tsp45I	GTSAC	4 cut(s)	569, 644, 941, 1469
TspDTI	ATGAA	9 cut(s)	152, 342, 492, 666, 1079, 1116, 1286, 1441, 1842
TspGWI	ACGGA	1 cut(s)	178
TspMI	CCCGGG	1 cut(s)	748
TspRI	CASTG	3 cut(s)	1417, 1474, 1878
VpaK11BI	GGWCC	1 cut(s)	1379
XapI	RAATTY	6 cut(s)	563, 727, 970, 1026, 1177, 1627
XceI	RCATGY	1 cut(s)	766
XcmI	CCANNNNNNNNNTGG	1 cut(s)	563
XmaI	CCCGGG	1 cut(s)	748
XmiI	GTMKAC	3 cut(s)	258, 456, 1107
XspI	CTAG	7 cut(s)	305, 491, 543, 633, 1340, 1592, 1704
ZrmI	AGTACT	1 cut(s)	868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.