RchiOBHm_Chr6g0303311

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
63076911 .. 63078652
1742 bp
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UTR
Exon/CDS
Intron
PRQ27248

Sequence Viewer

Length: 1386 bp
ATGTCAGAATCAACTTTTGGCTGGCCCCTTCAGAAAGTAACTGTTCCTATGGAGACTCAGGGAGCTTGTGAAAAATCAGATGATGATTCGAAGAGTTGGGAGGTTGAAGAAGATGAATATGCATCACCTTTATCAAGGCCTGGTTGGCCTCTCCTTCGTGTAGCAACCTCCGAAACCATGAGTACTCCTGGTAGAAAGTTTGAAGCAAAAGATGTGTCTGTAGTCGAGTGGGTGATGGGACTTCCTAGTCGAACAACCTCAGTCAATCTGCAGCTTGCTAATGAATTGAAGTTCCTCATTAAGAAAGACTCACAAGGTTGCAGGATGTTTAGCTACGCCGAAATAAGGACTGCAACTTCTCAATTCTCCTCAGATAATCTTATCGGCGAGGGAGGGTGCAGCAGTGTGTACAGAGGAGTTCTCCGATGTGGGAAATCCGTGGCGGTGAAGATTTTGAAAGTATACAAGGAAGCTTGGGATGATTTTTGCTTGGAAGCCAAATTTGTGTCTTCAATTAAGCATAAGCATATAGTATCTCTCATTGGCGTGTGTGAGGAAGATGAGAATCTTGTTCTAGTATATGAGCTCTTTCCTAGGGGGAGTTTGGAGGAGAACTTGCATGATTGTAATGATGGTTCTGTACTGCCATGGGAAGTGAGATTCAACGTGGCAGTTGCAGTTGCTGAGGCTCTAAATTATCTACACAATGAGTGCCCTCAGCCGATTATTCATAGAGACGTAAAATCTGCAAACATTCTTCTCTCAAGTGATCATCAGCCACAGTTGTCAGATTTTGGGCTTGCTATATGGGGATCAGTGGATTCTAGTTATGTAATAAGTAATGATGTGGTGGGAACTTTCGGATACATGGCTCCAGAGTATTTCATGCAAGGGAGGGTCAGTGACAAGGTTGATGTGTACGCCTTTGGTGTAGTTCTCCTTGAACTACTATCAGGAAGAAAGCCAGTTGATGTTGAGGCTCCAAAAGGACAAGAGAGCTTGATCAAGTGGGCAAGAAAGCTATTAAAAATTGGAGATCTTAAAGCATTGCTGGATCCCAAGCTAAGAGCGGACTATGATATTGTCCAAATTCGTAGAATGTCTATGGCAGCAAGTCTTTGCACAAACCAGTCAGCTCAAATTCGTCCAAATATGAGGCAGGTACTGAAAATCTTAGGAGGGGAGACAGATGCCAATGAGTCAGACTATTATGAAGCCGAAGATGACAGTTTACTGGAAGCTGATTGGAATTCAGTTTCCGAAGTGTCCGAGACAAAGGATGATAGCATTTCACCATCAAGTTCTACTGATACAGCATCCAGTGCAGGAAAAACTCCCCGCCTTAAATTGAAGGACTACTTAACTATACATGACCATCAATTTTGA

Protein Analysis

461

Amino Acids

51.32

Weight (kDa)

4.93

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 124 - 350 1.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 125 - 390 1.3e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 246
Acc36I ACCTGC 1 cut(s) 1150
AccBSI CCGCTC 1 cut(s) 1070
AccI GTMKAC 1 cut(s) 462
AciI CCGC 3 cut(s) 443, 1070, 1339
AclWI GGATC 3 cut(s) 820, 1049, 1062
AcsI RAATTY 4 cut(s) 500, 1089, 1140, 1249
AcuI CTGAAG 1 cut(s) 14
AfaI GTAC 5 cut(s) 184, 410, 642, 920, 1164
AfiI CCNNNNNNNGG 1 cut(s) 345
AgsI TTSAA 8 cut(s) 107, 203, 289, 457, 513, 664, 944, 1351
AjnI CCWGG 2 cut(s) 139, 187
AjuI GAANNNNNNNTTGG 1 cut(s) 32
Alw21I GWGCWC 1 cut(s) 588
Alw26I GTCTC 4 cut(s) 47, 729, 1178, 1265
AlwI GGATC 3 cut(s) 820, 1049, 1062
AlwNI CAGNNNCTG 2 cut(s) 683, 1165
AoxI GGCC 3 cut(s) 23, 137, 146
ApeKI GCWGC 3 cut(s) 271, 399, 1109
ApoI RAATTY 4 cut(s) 500, 1089, 1140, 1249
ArsI GACNNNNNNTTYG 2 cut(s) 200, 232
AspA2I CCTAGG 1 cut(s) 593
AspS9I GGNCC 1 cut(s) 24
AsuHPI GGTGA 4 cut(s) 117, 244, 457, 1284
AsuII TTCGAA 1 cut(s) 89
AvrII CCTAGG 1 cut(s) 593
BaeGI GKGCMC 1 cut(s) 716
BamHI GGATCC 1 cut(s) 1054
BanII GRGCYC 1 cut(s) 588
BbsI GAAGAC 1 cut(s) 501
Bbv12I GWGCWC 1 cut(s) 588
BbvCI CCTCAGC 2 cut(s) 684, 717
BbvI GCAGC 3 cut(s) 283, 411, 1121
BccI CCATC 4 cut(s) 229, 626, 1303, 1383
BciT130I CCWGG 2 cut(s) 141, 189
BciVI GTATCC 1 cut(s) 857
BclI TGATCA 2 cut(s) 769, 1002
BcoDI GTCTC 4 cut(s) 47, 729, 1178, 1265
BfaI CTAG 4 cut(s) 246, 575, 594, 825
BfmI CTRYAG 2 cut(s) 219, 269
BfuAI ACCTGC 1 cut(s) 1150
BfuI GTATCC 1 cut(s) 857
BglI GCCNNNNNGGC 1 cut(s) 145
BglII AGATCT 1 cut(s) 1036
BisI GCNGC 3 cut(s) 272, 400, 1110
BlnI CCTAGG 1 cut(s) 593
BlsI GCNGC 3 cut(s) 273, 401, 1111
BmcAI AGTACT 1 cut(s) 184
Bme1390I CCNGG 2 cut(s) 141, 189
BmgT120I GGNCC 1 cut(s) 24
BmiI GGNNCC 4 cut(s) 26, 873, 981, 1056
BmrFI CCNGG 2 cut(s) 141, 189
BmsI GCATC 3 cut(s) 131, 1180, 1325
BpiI GAAGAC 1 cut(s) 501
BplI GAGNNNNNCTC 2 cut(s) 405, 437
BpmI CTGGAG 1 cut(s) 858
Bpu10I CCTNAGC 2 cut(s) 684, 717
Bpu14I TTCGAA 1 cut(s) 89
BpuEI CTTGAG 1 cut(s) 748
BsaBI GATNNNNATC 1 cut(s) 564
BsaJI CCNNGG 3 cut(s) 438, 593, 647
BsaXI ACNNNNNCTCC 2 cut(s) 886, 916
Bsc4I CCNNNNNNNGG 1 cut(s) 345
Bse1I ACTGG 4 cut(s) 965, 1129, 1239, 1320
Bse3DI GCAATG 1 cut(s) 1046
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 2 cut(s) 141, 189
BseDI CCNNGG 3 cut(s) 438, 593, 647
BseGI GGATG 4 cut(s) 330, 484, 1285, 1316
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 1 cut(s) 345
BseMI GCAATG 1 cut(s) 1046
BseMII CTCAG 5 cut(s) 71, 273, 384, 675, 731
BseNI ACTGG 4 cut(s) 965, 1129, 1239, 1320
BseRI GAGGAG 3 cut(s) 358, 429, 623
BseSI GKGCMC 1 cut(s) 716
BseXI GCAGC 3 cut(s) 283, 411, 1121
BsgI GTGCAG 2 cut(s) 418, 1344
BshFI GGCC 3 cut(s) 25, 139, 148
BsiHKAI GWGCWC 1 cut(s) 588
BslFI GGGAC 1 cut(s) 252
BslI CCNNNNNNNGG 1 cut(s) 345
BsmAI GTCTC 4 cut(s) 47, 729, 1178, 1265
BsmBI CGTCTC 1 cut(s) 729
BsmFI GGGAC 1 cut(s) 252
BsnI GGCC 3 cut(s) 25, 139, 148
Bsp119I TTCGAA 1 cut(s) 89
Bsp1286I GDGCHC 2 cut(s) 588, 716
Bsp1407I TGTACA 1 cut(s) 408
Bsp143I GATC 5 cut(s) 769, 812, 1002, 1036, 1054
Bsp19I CCATGG 1 cut(s) 647
BspACI CCGC 3 cut(s) 443, 1070, 1339
BspANI GGCC 3 cut(s) 25, 139, 148
BspCNI CTCAG 5 cut(s) 70, 272, 383, 676, 730
BspLI GGNNCC 4 cut(s) 26, 873, 981, 1056
BspMAI CTGCAG 1 cut(s) 273
BspMI ACCTGC 1 cut(s) 1150
BspPI GGATC 3 cut(s) 820, 1049, 1062
BspT104I TTCGAA 1 cut(s) 89
BsrBI CCGCTC 1 cut(s) 1070
BsrDI GCAATG 1 cut(s) 1046
BsrGI TGTACA 1 cut(s) 408
BsrI ACTGG 4 cut(s) 965, 1129, 1239, 1320
BssECI CCNNGG 3 cut(s) 438, 593, 647
BssMI GATC 5 cut(s) 769, 812, 1002, 1036, 1054
BssNAI GTATAC 1 cut(s) 463
BssT1I CCWWGG 2 cut(s) 593, 647
Bst1107I GTATAC 1 cut(s) 463
Bst2UI CCWGG 2 cut(s) 141, 189
Bst4CI ACNGT 3 cut(s) 43, 783, 1229
Bst6I CTCTTC 1 cut(s) 86
BstAPI GCANNNNNTGC 1 cut(s) 1322
BstAUI TGTACA 1 cut(s) 408
BstBI TTCGAA 1 cut(s) 89
BstC8I GCNNGC 3 cut(s) 23, 276, 801
BstDEI CTNAG 7 cut(s) 57, 259, 370, 684, 717, 1064, 1174
BstDSI CCRYGG 2 cut(s) 438, 647
BstF5I GGATG 4 cut(s) 330, 484, 1285, 1316
BstKTI GATC 5 cut(s) 772, 815, 1005, 1039, 1057
BstMAI GTCTC 4 cut(s) 47, 729, 1178, 1265
BstMBI GATC 5 cut(s) 769, 812, 1002, 1036, 1054
BstMWI GCNNNNNNNGC 2 cut(s) 145, 1322
BstNI CCWGG 2 cut(s) 141, 189
BstSCI CCNGG 2 cut(s) 139, 187
BstSFI CTRYAG 2 cut(s) 219, 269
BstSLI GKGCMC 1 cut(s) 716
BstV1I GCAGC 3 cut(s) 283, 411, 1121
BstV2I GAAGAC 1 cut(s) 501
BstX2I RGATCY 2 cut(s) 1036, 1054
BstYI RGATCY 2 cut(s) 1036, 1054
BstZ17I GTATAC 1 cut(s) 463
BsuI GTATCC 1 cut(s) 857
BsuRI GGCC 3 cut(s) 25, 139, 148
BtgI CCRYGG 2 cut(s) 438, 647
BtsCI GGATG 4 cut(s) 330, 484, 1285, 1316
BtsI GCAGTG 1 cut(s) 409
BtsIMutI CAGTG 4 cut(s) 409, 822, 907, 1327
BveI ACCTGC 1 cut(s) 1150
Cac8I GCNNGC 3 cut(s) 23, 276, 801
CaiI CAGNNNCTG 2 cut(s) 683, 1165
Cfr13I GGNCC 1 cut(s) 24
Csp6I GTAC 5 cut(s) 183, 409, 641, 919, 1163
CviAII CATG 6 cut(s) 178, 620, 648, 868, 886, 1370
CviQI GTAC 5 cut(s) 183, 409, 641, 919, 1163
DdeI CTNAG 7 cut(s) 57, 259, 370, 684, 717, 1064, 1174
DpnI GATC 5 cut(s) 771, 814, 1004, 1038, 1056
DpnII GATC 5 cut(s) 769, 812, 1002, 1036, 1054
DrdI GACNNNNNNGTC 1 cut(s) 246
DseDI GACNNNNNNGTC 1 cut(s) 246
Eam1104I CTCTTC 1 cut(s) 86
EarI CTCTTC 1 cut(s) 86
Ecl136II GAGCTC 1 cut(s) 586
Eco130I CCWWGG 2 cut(s) 593, 647
Eco147I AGGCCT 1 cut(s) 139
Eco24I GRGCYC 1 cut(s) 588
Eco53kI GAGCTC 1 cut(s) 586
Eco57I CTGAAG 1 cut(s) 14
EcoICRI GAGCTC 1 cut(s) 586
EcoRI GAATTC 1 cut(s) 1249
EcoRII CCWGG 2 cut(s) 139, 187
EcoT14I CCWWGG 2 cut(s) 593, 647
EcoT22I ATGCAT 1 cut(s) 124
EcoT38I GRGCYC 1 cut(s) 588
ErhI CCWWGG 2 cut(s) 593, 647
Esp3I CGTCTC 1 cut(s) 729
FaeI CATG 6 cut(s) 181, 623, 651, 871, 889, 1373
FalI AAGNNNNNCTT 2 cut(s) 1343, 1375
FaqI GGGAC 1 cut(s) 252
FatI CATG 6 cut(s) 177, 619, 647, 867, 885, 1369
FauI CCCGC 1 cut(s) 1346
FbaI TGATCA 2 cut(s) 769, 1002
FblI GTMKAC 1 cut(s) 462
Fnu4HI GCNGC 3 cut(s) 272, 400, 1110
FokI GGATG 4 cut(s) 337, 491, 1292, 1303
FriOI GRGCYC 1 cut(s) 588
Fsp4HI GCNGC 3 cut(s) 272, 400, 1110
FspBI CTAG 4 cut(s) 246, 575, 594, 825
GluI GCNGC 3 cut(s) 272, 400, 1110
GsuI CTGGAG 1 cut(s) 858
HaeIII GGCC 3 cut(s) 25, 139, 148
Hin1II CATG 6 cut(s) 181, 623, 651, 871, 889, 1373
HindIII AAGCTT 1 cut(s) 471
HinfI GANTC 8 cut(s) 8, 55, 86, 308, 565, 660, 821, 1199
HphI GGTGA 4 cut(s) 117, 244, 457, 1284
Hpy166II GTNNAC 4 cut(s) 409, 463, 919, 1232
Hpy188III TCNNGA 2 cut(s) 875, 954
Hpy8I GTNNAC 4 cut(s) 409, 463, 919, 1232
HpyAV CCTTC 3 cut(s) 38, 164, 1345
HpyCH4III ACNGT 3 cut(s) 43, 783, 1229
HpyCH4IV ACGT 2 cut(s) 666, 738
HpyF10VI GCNNNNNNNGC 2 cut(s) 145, 1322
HpyF3I CTNAG 7 cut(s) 57, 259, 370, 684, 717, 1064, 1174
HpySE526I ACGT 2 cut(s) 666, 738
Hsp92II CATG 6 cut(s) 181, 623, 651, 871, 889, 1373
Ksp22I TGATCA 2 cut(s) 769, 1002
Kzo9I GATC 5 cut(s) 769, 812, 1002, 1036, 1054
LmnI GCTCC 3 cut(s) 62, 877, 985
Lsp1109I GCAGC 3 cut(s) 283, 411, 1121
LweI GCATC 3 cut(s) 131, 1180, 1325
MaeI CTAG 4 cut(s) 246, 575, 594, 825
MaeII ACGT 2 cut(s) 666, 738
MaeIII GTNAC 2 cut(s) 37, 902
MalI GATC 5 cut(s) 771, 814, 1004, 1038, 1056
MbiI CCGCTC 1 cut(s) 1070
MboI GATC 5 cut(s) 769, 812, 1002, 1036, 1054
MboII GAAGA 9 cut(s) 103, 119, 122, 460, 501, 569, 749, 969, 1232
MflI RGATCY 2 cut(s) 1036, 1054
MhlI GDGCHC 2 cut(s) 588, 716
MlyI GAGTC 3 cut(s) 49, 302, 1208
Mph1103I ATGCAT 1 cut(s) 124
MseI TTAA 6 cut(s) 300, 516, 1025, 1041, 1344, 1361
MslI CAYNNNNRTG 1 cut(s) 545
MspR9I CCNGG 2 cut(s) 141, 189
MvaI CCWGG 2 cut(s) 141, 189
MwoI GCNNNNNNNGC 2 cut(s) 145, 1322
NcoI CCATGG 1 cut(s) 647
NdeII GATC 5 cut(s) 769, 812, 1002, 1036, 1054
NlaIII CATG 6 cut(s) 181, 623, 651, 871, 889, 1373
NlaIV GGNNCC 4 cut(s) 26, 873, 981, 1056
NmuCI GTSAC 1 cut(s) 902
NsiI ATGCAT 1 cut(s) 124
NspV TTCGAA 1 cut(s) 89
PceI AGGCCT 1 cut(s) 139
PfeI GAWTC 5 cut(s) 8, 86, 565, 660, 821
PkrI GCNGC 3 cut(s) 273, 401, 1111
PleI GAGTC 3 cut(s) 49, 302, 1207
PpsI GAGTC 3 cut(s) 49, 302, 1207
Psp124BI GAGCTC 1 cut(s) 588
Psp6I CCWGG 2 cut(s) 139, 187
PspGI CCWGG 2 cut(s) 139, 187
PspN4I GGNNCC 4 cut(s) 26, 873, 981, 1056
PspPI GGNCC 1 cut(s) 24
PsrI GAACNNNNNNTAC 2 cut(s) 619, 651
PstI CTGCAG 1 cut(s) 273
PstNI CAGNNNCTG 2 cut(s) 683, 1165
PsuI RGATCY 2 cut(s) 1036, 1054
RsaI GTAC 5 cut(s) 184, 410, 642, 920, 1164
RsaNI GTAC 5 cut(s) 183, 409, 641, 919, 1163
RseI CAYNNNNRTG 1 cut(s) 545
SacI GAGCTC 1 cut(s) 588
SaqAI TTAA 6 cut(s) 300, 516, 1025, 1041, 1344, 1361
SatI GCNGC 3 cut(s) 272, 400, 1110
Sau3AI GATC 5 cut(s) 769, 812, 1002, 1036, 1054
Sau96I GGNCC 1 cut(s) 24
ScaI AGTACT 1 cut(s) 184
SchI GAGTC 3 cut(s) 49, 302, 1208
ScrFI CCNGG 2 cut(s) 141, 189
SduI GDGCHC 2 cut(s) 588, 716
SfaNI GCATC 3 cut(s) 131, 1180, 1325
SfcI CTRYAG 2 cut(s) 219, 269
SfiI GGCCNNNNNGGCC 1 cut(s) 145
SfuI TTCGAA 1 cut(s) 89
SmiMI CAYNNNNRTG 1 cut(s) 545
SmlI CTYRAG 1 cut(s) 763
SmoI CTYRAG 1 cut(s) 763
SseBI AGGCCT 1 cut(s) 139
SsiI CCGC 3 cut(s) 443, 1070, 1339
SspMI CTAG 4 cut(s) 246, 575, 594, 825
SstI GAGCTC 1 cut(s) 588
StuI AGGCCT 1 cut(s) 139
StyD4I CCNGG 2 cut(s) 139, 187
StyI CCWWGG 2 cut(s) 593, 647
TaaI ACNGT 3 cut(s) 43, 783, 1229
TaiI ACGT 2 cut(s) 669, 741
TaqI TCGA 3 cut(s) 89, 225, 250
TatI WGTACW 3 cut(s) 182, 408, 640
TfiI GAWTC 5 cut(s) 8, 86, 565, 660, 821
Tru1I TTAA 6 cut(s) 300, 516, 1025, 1041, 1344, 1361
Tru9I TTAA 6 cut(s) 300, 516, 1025, 1041, 1344, 1361
TscAI CASTG 4 cut(s) 409, 822, 907, 1327
TseFI GTSAC 1 cut(s) 902
TseI GCWGC 3 cut(s) 271, 399, 1109
Tsp45I GTSAC 1 cut(s) 902
TspDTI ATGAA 5 cut(s) 129, 297, 719, 874, 1227
TspGWI ACGGA 1 cut(s) 427
TspRI CASTG 4 cut(s) 409, 822, 907, 1327
XapI RAATTY 4 cut(s) 500, 1089, 1140, 1249
XmaJI CCTAGG 1 cut(s) 593
XmiI GTMKAC 1 cut(s) 462
XspI CTAG 4 cut(s) 246, 575, 594, 825
ZrmI AGTACT 1 cut(s) 184
Zsp2I ATGCAT 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.