Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001023

Physical Location & Seq

Genomic Coordinates Reverse (-)

47218104 .. 47224548

Gene Structure 6445 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0320300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGAGGACCTTCTTTCCCTCCGAGTCTTGTAAAGAGTCGCAGCTCAATGCTCTCAATCCACAGTCTTGGCTCCAAGTCGAAAGAGGGAAGGTTTCCAAGCTTTCATCGAACTCAAACTCAAACTCCTCCTCCTCCTCCTCCTCCTTCCGTTCATATTCTTCTATAGAATCTCTTATAAAGGTGCCCGAGCCGCCTATACTCCCATTCTATAAGCCGGTTGATTATGTGGAGGTTTTAGCTCAAATTCATGAAGAACTTGAGTTGTGTCCTCCACAGGAGCAGTCAAATCTTTATTTGTTACAATTCCAGGTCTTTAGGGGCCTTGGAGAAGTCAAGCTGATGCGGAGAAGCCTCCGTGCAGCTTGGCAGAAAGCCAACAGTGTTCATGAGAAGCTCGTATTTGCAGCATGGTTGAAGTATGAGAAGCAAGGGGAAGATCATATTTCTGACTTGCTTTCCTCTTGTGGAAAATGTGCACAGGAGTTTGGGCCAGTAGATGTTTTAGCTCAGTTTCCTGTTGATGGTGAGGCTAGTACCCATCAGACTATCTCAATGGGTGGGAACAAGATGTCAAGAAATGTCAGTTTTAAAATCGAGGATGAGAAAATAGTCTGTGATAGGCAGAAAATATCCAGCCTTTCGGCTCCATTTGATGCCATGCTTAATGGGTGCTTCTCAGAATCACTTAGCGAGGACATAGATTTGTCAAAAAACAATATCTCTGCATCCGGTATGAAGGAAATCAATGAGTTCAGTAAAACAGGCAGTTTGGGTGAAGTCCCTCCACATCTTTTGTTGGAAATATTAGCTTTTGCTAATAAATTTTGTTGCGAAAAGCTCAAAGATGCTTGTGATAGGAAACTTGCTTCCTTAGTGTCTTCTAGAGATGATGCAGTGGAACTCATGGAGTATGCACTTGAAGAGAACTGTCGTGTCCTTGCTGCATCATGTTTACAAGTTTTCTTGGAAGATCTTCCTAATTGTTTGAATGACGACCGGGTGGTGGAGCTGTTCAAGCATGCTGATAGAGAGCAGAGATCGATCATGGTTGGACCAGGCTCATTTTCACTGTACTGTTTATTAAGTGAAGTTGCTATGAACATTGATCCTCAGTCAGATAAAACAGCTTGTTTTCTGGAACGGTTGGTAGAGTTTTCTGAAAATGATAGGCAAAGACTGCTGGCATCTCATCAGTTGGGATGTCTGAGGCTCTTGAGAAAAGAGTATGATGAAGCGAAGCGTCTCTTTGAGGAAGCTTTAACTGCAGGCCATATTTATTCAGTTGCAGGTTTAGCTAGACTGGATTACATCAAAGGCCATAAAGTTTGGTCATATGAAAAGCTGAGCTCTGTGATCAACTCTGTTATTCCTCTTGGATGGATGTACCAGGAGAGGTCATTATACTGTGAAGATGATAAGAAATGGGAAGACCTTGAGAAAGCATCTGAATTGGACCCAACTCTTACTTATCCATACATGTATAGGGCAGCTACACTAATGAGAAAAAACAACTCTCAAGCTGCACTTGCAGAAATTAATCGGGTTCTTGGGTTTAAACTTGCATTGGATTGCTTGGAGCTCCGTTTTTGTTTCTACCTCACTCTTGAGGATTATAAATCAGCCATTTGTGACGTTCAAGCAATTCTTACTCTCTGCCCAGATTATAGGATGTTGGAGGGACGGGTTGCAGCATCCCAACTTCGTACACTTGTCCGTGAGCATGTTGAAAATTGGACAACAGCAGATTGTTGGTTGCAACTGTATGATAGGTGGTCTTCAGTTGATGATATTGGGTCCCTCTCTGTTATTTACCAGATGCTTGAATCTGATGAGGCAAAAGGTGTTCTCTATTTCAGACAGTCTTTGCTCCTCCTCAGGTTGAACTGTCCTGAAGCTGCAATGCGGAGTTTACAATTAGCTCGTCAACATGCATCCAGCGAACATGAAAAGTTGGTGTATGAGGGATGGATCTTATACGACACAGGCCACTGTGAGGAAGGGCTCCGTAAAGCTGAAGAATCTATCAAAATTGAAAGATCCTTTGAGGCCTTTTTCTTGAAAGCATATGCACTGGCAGACTCTAGCCAAGATCCGTCCTGTTCCTCAACTGTTGTTTCTCTCCTAGAAGACGCCTTGAAGTGCCGCTCAGACAGGTTGCGGAAAGGCCAGGCGCTAAATAACCTTGGAAGTGTTTATGTTGACTGTGGGAAGTTAGAGTTGGCAGCTGATTGCTACATTAATGCTCTTAAGATCAGGCATACCCGAGCCCACCAGGGCCTTGCTAGGGTTCATTTTCTCAAAAACGACAAGGCCGGTGCCTATGAAGAAATGACCAAACTGATTGAGAAAGCCCGGAATAATGCATCTGCCTATGAGAAAAGATCTGAATACTGTGATCGTGAACTCACAAAGACAGATCTGGAGATGGTCACCCAATTAGATCCACTCCGGGTATACCCTTACAGATATAGAGCTGCAGTGTTGATGGATAGCCACAAAGAAAAAGAGGCAATTGCAGAACTATCAAAGGCAATTGCATTCAAAGCCGATCTCCACCTTTTGCACTTGAGGGCTGCATTCCATGAGCACACTGGGAATGTCATGGGTGCACTGCGAGACTGTCGAGCTGCTCTTTCTGTCGACCCAAACCATCAAGAGATGCTGGAGCTTCACAGCCGTGTAAACAGCCATGAGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009623 GO:0009719 GO:0009723 GO:0009725 GO:0009814 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0032870 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

899

Amino Acids

102.08

Weight (kDa)

5.62

Isoelectric Point (pI)

48.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16750 AT2G16750 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030
fragaria_vesca	FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g38170 FvH4_2g38170
malus_domestica	MD05G1121300.v1.1 MD08G1010200.v1.1 MD15G1010100.v1.1
prunus_persica	Prupe.1G362600_v2.0.a1 Prupe.8G165200_v2.0.a1 Prupe.8G165200_v2.0.a1
pyrus_communis	pycom05g11550 pycom10g10680 pycom15g00830
rosa_chinensis	RchiOBHm_Chr6g0251891 RchiOBHm_Chr6g0303311
rosa_laevigata	RLG00000011093 RLG00000015422
rosa_multiflora	Rmu_sc0007252.1_g000005 Rmu_sc0027227.1_g000001 Rmu_ssc0000303.1_g000011
rosa_roxburghii	Rroxscaffold_7G00164880 Rroxscaffold_7G00216330
rosa_rugosa	Rorug05G0504900 Rorug05G0504900 Rorug06G0320200 Rorug06G0320300 Rorug06G0320300 Rorug06G0320300 Rorug06G0320300
rosa_samantha	Rh6AG016000 Rh6AG434700 Rh6BG014000 Rh6BG468400 Rh6CG010900 Rh6CG446700 Rh6DG012100 Rh6DG433500
rosa_wichuraiana	Rw6G001530 Rw6G037640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	176, 1614
Acc36I	ACCTGC	1 cut(s)	1277
AccB1I	GGYRCC	2 cut(s)	181, 2315
AccBSI	CCGCTC	1 cut(s)	2145
AccI	GTMKAC	2 cut(s)	2454, 2640
AciI	CCGC	5 cut(s)	191, 343, 1903, 2143, 2158
AclWI	GGATC	5 cut(s)	1100, 1976, 2031, 2084, 2435
AcsI	RAATTY	2 cut(s)	243, 821
AcuI	CTGAAG	3 cut(s)	1761, 1911, 2034
AcyI	GRCGYC	1 cut(s)	2130
AfaI	GTAC	4 cut(s)	535, 1073, 1385, 1705
AfiI	CCNNNNNNNGG	4 cut(s)	521, 1003, 1993, 2284
AflII	CTTAAG	1 cut(s)	2246
AflIII	ACRYGT	1 cut(s)	1476
AjnI	CCWGG	5 cut(s)	306, 1054, 1386, 2166, 2271
AjuI	GAANNNNNNNTTGG	2 cut(s)	2201, 2233
AleI	CACNNNNGTG	1 cut(s)	2676
Alw21I	GWGCWC	5 cut(s)	478, 1349, 1581, 2589, 2611
Alw26I	GTCTC	2 cut(s)	1247, 2610
Alw44I	GTGCAC	2 cut(s)	474, 2607
AlwI	GGATC	5 cut(s)	1100, 1976, 2031, 2084, 2435
Ama87I	CYCGRG	2 cut(s)	185, 2262
AoxI	GGCC	9 cut(s)	319, 488, 1267, 1315, 1984, 2046, 2164, 2275, 2310
ApaLI	GTGCAC	2 cut(s)	474, 2607
ApoI	RAATTY	2 cut(s)	243, 821
AseI	ATTAAT	2 cut(s)	1536, 2238
Asp700I	GAANNNNTTC	1 cut(s)	972
AspLEI	GCGC	1 cut(s)	2173
AspS9I	GGNCC	7 cut(s)	6, 319, 488, 1052, 1453, 1794, 2275
AsuC2I	CCSGG	3 cut(s)	998, 2353, 2450
AsuHPI	GGTGA	3 cut(s)	536, 785, 2422
AvaI	CYCGRG	2 cut(s)	185, 2262
AvaII	GGWCC	4 cut(s)	6, 1052, 1453, 1794
AxyI	CCTNAGG	1 cut(s)	1874
BaeGI	GKGCMC	3 cut(s)	186, 478, 2611
BanI	GGYRCC	2 cut(s)	181, 2315
BanII	GRGCYC	4 cut(s)	1349, 1581, 2004, 2269
BbsI	GAAGAC	4 cut(s)	870, 1434, 1767, 2133
Bbv12I	GWGCWC	5 cut(s)	478, 1349, 1581, 2589, 2611
BccI	CCATC	7 cut(s)	515, 546, 1371, 1959, 2419, 2479, 2658
BceAI	ACGGC	1 cut(s)	2661
BciT130I	CCWGG	5 cut(s)	308, 1056, 1388, 2168, 2273
BclI	TGATCA	1 cut(s)	1353
BcnI	CCSGG	3 cut(s)	998, 2353, 2450
BcoDI	GTCTC	2 cut(s)	1247, 2610
BfaI	CTAG	6 cut(s)	531, 882, 1296, 2082, 2123, 2283
BfmI	CTRYAG	3 cut(s)	162, 1263, 2475
BfoI	RGCGCY	1 cut(s)	2174
BfrI	CTTAAG	1 cut(s)	2246
BfuAI	ACCTGC	1 cut(s)	1277
BglII	AGATCT	3 cut(s)	970, 2381, 2416
BlpI	GCTNAGC	1 cut(s)	1343
Bme1390I	CCNGG	8 cut(s)	308, 998, 1056, 1388, 2168, 2273, 2353, 2450
Bme18I	GGWCC	4 cut(s)	6, 1052, 1453, 1794
BmeT110I	CYCGRG	2 cut(s)	185, 2262
BmgT120I	GGNCC	7 cut(s)	6, 319, 488, 1052, 1453, 1794, 2275
BmiI	GGNNCC	9 cut(s)	71, 183, 320, 645, 1455, 1795, 1796, 2003, 2317
BmrFI	CCNGG	8 cut(s)	308, 998, 1056, 1388, 2168, 2273, 2353, 2450
BmrI	ACTGGG	1 cut(s)	2601
BmuI	ACTGGG	1 cut(s)	2601
BpiI	GAAGAC	4 cut(s)	870, 1434, 1767, 2133
BpmI	CTGGAG	2 cut(s)	2441, 2684
Bpu1102I	GCTNAGC	1 cut(s)	1343
BpuEI	CTTGAG	6 cut(s)	278, 1234, 1454, 1500, 1625, 2587
BpuMI	CCSGG	3 cut(s)	998, 2353, 2450
Bsa29I	ATCGAT	1 cut(s)	1040
BsaHI	GRCGYC	1 cut(s)	2130
BsaJI	CCNNGG	3 cut(s)	322, 2182, 2272
BsaWI	WCCGGW	1 cut(s)	728
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 113, 137, 143
Bsc4I	CCNNNNNNNGG	4 cut(s)	521, 1003, 1993, 2284
Bse118I	RCCGGY	2 cut(s)	214, 2312
Bse1I	ACTGG	4 cut(s)	491, 1305, 2076, 2596
Bse21I	CCTNAGG	1 cut(s)	1874
Bse3DI	GCAATG	1 cut(s)	1905
BseBI	CCWGG	5 cut(s)	308, 1056, 1388, 2168, 2273
BseCI	ATCGAT	1 cut(s)	1040
BseDI	CCNNGG	3 cut(s)	322, 2182, 2272
BseGI	GGATG	9 cut(s)	604, 725, 1205, 1382, 1386, 1674, 1691, 1931, 1970
BseLI	CCNNNNNNNGG	4 cut(s)	521, 1003, 1993, 2284
BseMI	GCAATG	1 cut(s)	1905
BseMII	CTCAG	7 cut(s)	521, 690, 1124, 1196, 1334, 1888, 2160
BseNI	ACTGG	4 cut(s)	491, 1305, 2076, 2596
BseRI	GAGGAG	8 cut(s)	115, 118, 121, 124, 127, 130, 1859, 1862
BseSI	GKGCMC	3 cut(s)	186, 478, 2611
BsgI	GTGCAG	2 cut(s)	378, 1506
Bsh1285I	CGRYCG	1 cut(s)	997
BshFI	GGCC	9 cut(s)	321, 490, 1269, 1317, 1986, 2048, 2166, 2277, 2312
BshNI	GGYRCC	2 cut(s)	181, 2315
BshVI	ATCGAT	1 cut(s)	1040
BsiEI	CGRYCG	1 cut(s)	997
BsiHKAI	GWGCWC	5 cut(s)	478, 1349, 1581, 2589, 2611
BsiHKCI	CYCGRG	2 cut(s)	185, 2262
BsiSI	CCGG	6 cut(s)	215, 729, 997, 2313, 2353, 2449
BslFI	GGGAC	3 cut(s)	764, 1692, 1780
BslI	CCNNNNNNNGG	4 cut(s)	521, 1003, 1993, 2284
BsmAI	GTCTC	2 cut(s)	1247, 2610
BsmBI	CGTCTC	1 cut(s)	1247
BsmFI	GGGAC	3 cut(s)	764, 1692, 1780
BsmI	GAATGC	2 cut(s)	2537, 2576
BsnI	GGCC	9 cut(s)	321, 490, 1269, 1317, 1986, 2048, 2166, 2277, 2312
BsoBI	CYCGRG	2 cut(s)	185, 2262
Bsp1286I	GDGCHC	8 cut(s)	186, 478, 1349, 1581, 2004, 2269, 2589, 2611
Bsp1720I	GCTNAGC	1 cut(s)	1343
BspACI	CCGC	5 cut(s)	191, 343, 1903, 2143, 2158
BspANI	GGCC	9 cut(s)	321, 490, 1269, 1317, 1986, 2048, 2166, 2277, 2312
BspCNI	CTCAG	7 cut(s)	520, 689, 1123, 1197, 1335, 1887, 2159
BspDI	ATCGAT	1 cut(s)	1040
BspHI	TCATGA	2 cut(s)	247, 385
BspLI	GGNNCC	9 cut(s)	71, 183, 320, 645, 1455, 1795, 1796, 2003, 2317
BspMAI	CTGCAG	2 cut(s)	1267, 2479
BspMI	ACCTGC	1 cut(s)	1277
BspPI	GGATC	5 cut(s)	1100, 1976, 2031, 2084, 2435
BspT107I	GGYRCC	2 cut(s)	181, 2315
BspTI	CTTAAG	1 cut(s)	2246
BsrBI	CCGCTC	1 cut(s)	2145
BsrDI	GCAATG	1 cut(s)	1905
BsrFI	RCCGGY	2 cut(s)	214, 2312
BsrI	ACTGG	4 cut(s)	491, 1305, 2076, 2596
BssAI	RCCGGY	2 cut(s)	214, 2312
BssECI	CCNNGG	3 cut(s)	322, 2182, 2272
BssNAI	GTATAC	1 cut(s)	2455
BssNI	GRCGYC	1 cut(s)	2130
BssT1I	CCWWGG	2 cut(s)	322, 2182
Bst1107I	GTATAC	1 cut(s)	2455
Bst2UI	CCWGG	5 cut(s)	308, 1056, 1388, 2168, 2273
Bst6I	CTCTTC	1 cut(s)	915
BstACI	GRCGYC	1 cut(s)	2130
BstAFI	CTTAAG	1 cut(s)	2246
BstAPI	GCANNNNNTGC	1 cut(s)	1177
BstC8I	GCNNGC	3 cut(s)	1020, 1182, 1267
BstDEI	CTNAG	9 cut(s)	507, 676, 686, 871, 1110, 1205, 1343, 1874, 2146
BstEII	GGTNACC	1 cut(s)	2428
BstF5I	GGATG	9 cut(s)	604, 725, 1205, 1382, 1386, 1674, 1691, 1931, 1970
BstH2I	RGCGCY	1 cut(s)	2174
BstHHI	GCGC	1 cut(s)	2173
BstMAI	GTCTC	2 cut(s)	1247, 2610
BstMCI	CGRYCG	1 cut(s)	997
BstMWI	GCNNNNNNNGC	7 cut(s)	190, 1015, 1177, 1262, 1292, 1526, 2543
BstNI	CCWGG	5 cut(s)	308, 1056, 1388, 2168, 2273
BstNSI	RCATGY	4 cut(s)	1022, 1480, 1724, 1931
BstPI	GGTNACC	1 cut(s)	2428
BstSCI	CCNGG	8 cut(s)	306, 996, 1054, 1386, 2166, 2271, 2351, 2448
BstSFI	CTRYAG	3 cut(s)	162, 1263, 2475
BstSLI	GKGCMC	3 cut(s)	186, 478, 2611
BstV2I	GAAGAC	4 cut(s)	870, 1434, 1767, 2133
BstX2I	RGATCY	7 cut(s)	970, 1968, 2036, 2089, 2381, 2416, 2440
BstXI	CCANNNNNNTGG	1 cut(s)	66
BstYI	RGATCY	7 cut(s)	970, 1968, 2036, 2089, 2381, 2416, 2440
BstZ17I	GTATAC	1 cut(s)	2455
Bsu15I	ATCGAT	1 cut(s)	1040
Bsu36I	CCTNAGG	1 cut(s)	1874
BsuRI	GGCC	9 cut(s)	321, 490, 1269, 1317, 1986, 2048, 2166, 2277, 2312
BsuTUI	ATCGAT	1 cut(s)	1040
BtsCI	GGATG	9 cut(s)	604, 725, 1205, 1382, 1386, 1674, 1691, 1931, 1970
BtsI	GCAGTG	3 cut(s)	900, 2484, 2609
BtsIMutI	CAGTG	8 cut(s)	385, 900, 1067, 1987, 2069, 2484, 2589, 2609
BveI	ACCTGC	1 cut(s)	1277
Cac8I	GCNNGC	3 cut(s)	1020, 1182, 1267
CciI	TCATGA	2 cut(s)	247, 385
CfoI	GCGC	1 cut(s)	2173
Cfr10I	RCCGGY	2 cut(s)	214, 2312
Cfr13I	GGNCC	7 cut(s)	6, 319, 488, 1052, 1453, 1794, 2275
ClaI	ATCGAT	1 cut(s)	1040
CseI	GACGC	2 cut(s)	1229, 2138
Csp6I	GTAC	4 cut(s)	534, 1072, 1384, 1704
CspCI	CAANNNNNGTGG	2 cut(s)	774, 809
CviQI	GTAC	4 cut(s)	534, 1072, 1384, 1704
DdeI	CTNAG	9 cut(s)	507, 676, 686, 871, 1110, 1205, 1343, 1874, 2146
DraI	TTTAAA	2 cut(s)	589, 1555
Eam1104I	CTCTTC	1 cut(s)	915
EarI	CTCTTC	1 cut(s)	915
Ecl136II	GAGCTC	2 cut(s)	1347, 1579
Eco130I	CCWWGG	2 cut(s)	322, 2182
Eco147I	AGGCCT	1 cut(s)	2048
Eco24I	GRGCYC	4 cut(s)	1349, 1581, 2004, 2269
Eco47I	GGWCC	4 cut(s)	6, 1052, 1453, 1794
Eco53kI	GAGCTC	2 cut(s)	1347, 1579
Eco57I	CTGAAG	3 cut(s)	1761, 1911, 2034
Eco81I	CCTNAGG	1 cut(s)	1874
Eco88I	CYCGRG	2 cut(s)	185, 2262
Eco91I	GGTNACC	1 cut(s)	2428
EcoICRI	GAGCTC	2 cut(s)	1347, 1579
EcoO109I	RGGNCCY	4 cut(s)	6, 319, 1794, 2275
EcoO65I	GGTNACC	1 cut(s)	2428
EcoRII	CCWGG	5 cut(s)	306, 1054, 1386, 2166, 2271
EcoT14I	CCWWGG	2 cut(s)	322, 2182
EcoT22I	ATGCAT	2 cut(s)	1933, 2365
EcoT38I	GRGCYC	4 cut(s)	1349, 1581, 2004, 2269
ErhI	CCWWGG	2 cut(s)	322, 2182
Esp3I	CGTCTC	1 cut(s)	1247
FalI	AAGNNNNNCTT	6 cut(s)	1229, 1261, 1509, 1541, 1629, 1661
FaqI	GGGAC	3 cut(s)	764, 1692, 1780
FauNDI	CATATG	2 cut(s)	1333, 2065
FbaI	TGATCA	1 cut(s)	1353
FblI	GTMKAC	2 cut(s)	2454, 2640
FokI	GGATG	9 cut(s)	611, 712, 1212, 1389, 1393, 1678, 1681, 1918, 1977
FriOI	GRGCYC	4 cut(s)	1349, 1581, 2004, 2269
FspBI	CTAG	6 cut(s)	531, 882, 1296, 2082, 2123, 2283
GlaI	GCGC	1 cut(s)	2172
GsuI	CTGGAG	2 cut(s)	2441, 2684
HaeII	RGCGCY	1 cut(s)	2174
HaeIII	GGCC	9 cut(s)	321, 490, 1269, 1317, 1986, 2048, 2166, 2277, 2312
HapII	CCGG	6 cut(s)	215, 729, 997, 2313, 2353, 2449
HgaI	GACGC	2 cut(s)	1229, 2138
HhaI	GCGC	1 cut(s)	2173
Hin1I	GRCGYC	1 cut(s)	2130
Hin6I	GCGC	1 cut(s)	2171
HinP1I	GCGC	1 cut(s)	2171
HincII	GTYRAC	3 cut(s)	1925, 2200, 2641
HindII	GTYRAC	3 cut(s)	1925, 2200, 2641
HindIII	AAGCTT	2 cut(s)	98, 1254
HinfI	GANTC	7 cut(s)	23, 35, 167, 680, 1823, 2018, 2078
HpaII	CCGG	6 cut(s)	215, 729, 997, 2313, 2353, 2449
HphI	GGTGA	3 cut(s)	536, 785, 2422
HpyAV	CCTTC	5 cut(s)	19, 82, 154, 730, 1991
HpyCH4IV	ACGT	1 cut(s)	1632
HpyF10VI	GCNNNNNNNGC	7 cut(s)	190, 1015, 1177, 1262, 1292, 1526, 2543
HpyF3I	CTNAG	9 cut(s)	507, 676, 686, 871, 1110, 1205, 1343, 1874, 2146
HpySE526I	ACGT	1 cut(s)	1632
Hsp92I	GRCGYC	1 cut(s)	2130
HspAI	GCGC	1 cut(s)	2171
KflI	GGGWCCC	1 cut(s)	1794
Ksp22I	TGATCA	1 cut(s)	1353
LmnI	GCTCC	9 cut(s)	75, 277, 649, 1006, 1576, 1584, 1872, 2007, 2665
MaeI	CTAG	6 cut(s)	531, 882, 1296, 2082, 2123, 2283
MaeII	ACGT	1 cut(s)	1632
MaeIII	GTNAC	3 cut(s)	297, 1628, 2428
MbiI	CCGCTC	1 cut(s)	2145
MfeI	CAATTG	2 cut(s)	2511, 2532
MflI	RGATCY	7 cut(s)	970, 1968, 2036, 2089, 2381, 2416, 2440
MhlI	GDGCHC	8 cut(s)	186, 478, 1349, 1581, 2004, 2269, 2589, 2611
MlyI	GAGTC	3 cut(s)	32, 44, 2072
MmeI	TCCRAC	3 cut(s)	777, 1030, 1653
Mph1103I	ATGCAT	2 cut(s)	1933, 2365
MroXI	GAANNNNTTC	1 cut(s)	972
MseI	TTAA	8 cut(s)	588, 663, 1082, 1259, 1536, 1554, 2238, 2247
MslI	CAYNNNNRTG	1 cut(s)	2676
MspA1I	CMGCKG	1 cut(s)	2225
MspCI	CTTAAG	1 cut(s)	2246
MspI	CCGG	6 cut(s)	215, 729, 997, 2313, 2353, 2449
MspR9I	CCNGG	8 cut(s)	308, 998, 1056, 1388, 2168, 2273, 2353, 2450
MssI	GTTTAAAC	1 cut(s)	1555
MunI	CAATTG	2 cut(s)	2511, 2532
Mva1269I	GAATGC	2 cut(s)	2537, 2576
MvaI	CCWGG	5 cut(s)	308, 1056, 1388, 2168, 2273
MwoI	GCNNNNNNNGC	7 cut(s)	190, 1015, 1177, 1262, 1292, 1526, 2543
NciI	CCSGG	3 cut(s)	998, 2353, 2450
NdeI	CATATG	2 cut(s)	1333, 2065
NlaIV	GGNNCC	9 cut(s)	71, 183, 320, 645, 1455, 1795, 1796, 2003, 2317
NmuCI	GTSAC	2 cut(s)	1628, 2428
NsiI	ATGCAT	2 cut(s)	1933, 2365
NspI	RCATGY	4 cut(s)	1022, 1480, 1724, 1931
OliI	CACNNNNGTG	1 cut(s)	2676
PaeI	GCATGC	1 cut(s)	1022
PagI	TCATGA	2 cut(s)	247, 385
PceI	AGGCCT	1 cut(s)	2048
PciI	ACATGT	1 cut(s)	1476
PctI	GAATGC	2 cut(s)	2537, 2576
PdmI	GAANNNNTTC	1 cut(s)	972
PfeI	GAWTC	4 cut(s)	167, 680, 1823, 2018
PleI	GAGTC	3 cut(s)	31, 43, 2072
PmeI	GTTTAAAC	1 cut(s)	1555
PpsI	GAGTC	3 cut(s)	31, 43, 2072
PpuMI	RGGWCCY	2 cut(s)	6, 1794
PscI	ACATGT	1 cut(s)	1476
PshBI	ATTAAT	2 cut(s)	1536, 2238
PsiI	TTATAA	2 cut(s)	176, 1614
Psp124BI	GAGCTC	2 cut(s)	1349, 1581
Psp5II	RGGWCCY	2 cut(s)	6, 1794
Psp6I	CCWGG	5 cut(s)	306, 1054, 1386, 2166, 2271
PspEI	GGTNACC	1 cut(s)	2428
PspGI	CCWGG	5 cut(s)	306, 1054, 1386, 2166, 2271
PspN4I	GGNNCC	9 cut(s)	71, 183, 320, 645, 1455, 1795, 1796, 2003, 2317
PspPI	GGNCC	7 cut(s)	6, 319, 488, 1052, 1453, 1794, 2275
PspPPI	RGGWCCY	2 cut(s)	6, 1794
PstI	CTGCAG	2 cut(s)	1267, 2479
PsuI	RGATCY	7 cut(s)	970, 1968, 2036, 2089, 2381, 2416, 2440
PvuII	CAGCTG	1 cut(s)	2225
RsaI	GTAC	4 cut(s)	535, 1073, 1385, 1705
RsaNI	GTAC	4 cut(s)	534, 1072, 1384, 1704
RseI	CAYNNNNRTG	1 cut(s)	2676
SacI	GAGCTC	2 cut(s)	1349, 1581
SalI	GTCGAC	1 cut(s)	2639
SaqAI	TTAA	8 cut(s)	588, 663, 1082, 1259, 1536, 1554, 2238, 2247
Sau96I	GGNCC	7 cut(s)	6, 319, 488, 1052, 1453, 1794, 2275
SchI	GAGTC	3 cut(s)	32, 44, 2072
ScrFI	CCNGG	8 cut(s)	308, 998, 1056, 1388, 2168, 2273, 2353, 2450
SduI	GDGCHC	8 cut(s)	186, 478, 1349, 1581, 2004, 2269, 2589, 2611
SfcI	CTRYAG	3 cut(s)	162, 1263, 2475
SinI	GGWCC	4 cut(s)	6, 1052, 1453, 1794
SmiMI	CAYNNNNRTG	1 cut(s)	2676
SmlI	CTYRAG	7 cut(s)	257, 1213, 1433, 1515, 1604, 2246, 2566
SmoI	CTYRAG	7 cut(s)	257, 1213, 1433, 1515, 1604, 2246, 2566
SphI	GCATGC	1 cut(s)	1022
SseBI	AGGCCT	1 cut(s)	2048
SsiI	CCGC	5 cut(s)	191, 343, 1903, 2143, 2158
SspI	AATATT	1 cut(s)	804
SspMI	CTAG	6 cut(s)	531, 882, 1296, 2082, 2123, 2283
SstI	GAGCTC	2 cut(s)	1349, 1581
StuI	AGGCCT	1 cut(s)	2048
StyD4I	CCNGG	8 cut(s)	306, 996, 1054, 1386, 2166, 2271, 2351, 2448
StyI	CCWWGG	2 cut(s)	322, 2182
TaiI	ACGT	1 cut(s)	1635
TaqI	TCGA	6 cut(s)	78, 107, 594, 1040, 2623, 2640
TatI	WGTACW	1 cut(s)	1071
TauI	GCSGC	2 cut(s)	193, 2145
TfiI	GAWTC	4 cut(s)	167, 680, 1823, 2018
Tru1I	TTAA	8 cut(s)	588, 663, 1082, 1259, 1536, 1554, 2238, 2247
Tru9I	TTAA	8 cut(s)	588, 663, 1082, 1259, 1536, 1554, 2238, 2247
TscAI	CASTG	8 cut(s)	385, 900, 1074, 1994, 2076, 2484, 2596, 2616
TseFI	GTSAC	2 cut(s)	1628, 2428
Tsp45I	GTSAC	2 cut(s)	1628, 2428
TspGWI	ACGGA	6 cut(s)	137, 344, 1571, 1703, 1994, 2082
TspRI	CASTG	8 cut(s)	385, 900, 1074, 1994, 2076, 2484, 2596, 2616
Vha464I	CTTAAG	1 cut(s)	2246
VneI	GTGCAC	2 cut(s)	474, 2607
VpaK11BI	GGWCC	4 cut(s)	6, 1052, 1453, 1794
VspI	ATTAAT	2 cut(s)	1536, 2238
XapI	RAATTY	2 cut(s)	243, 821
XbaI	TCTAGA	1 cut(s)	881
XceI	RCATGY	4 cut(s)	1022, 1480, 1724, 1931
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2588
XmiI	GTMKAC	2 cut(s)	2454, 2640
XmnI	GAANNNNTTC	1 cut(s)	972
XspI	CTAG	6 cut(s)	531, 882, 1296, 2082, 2123, 2283
Zsp2I	ATGCAT	2 cut(s)	1933, 2365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.