Rroxscaffold_7G00164880

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
6778859 .. 6781156
2298 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00164880.1

Sequence Viewer

Length: 1425 bp
ATGAGGACCAAGAAGCGGAATTCATCGGAATCTGATAGAGGTTGGTTAAGTTGCGATATGTCTGAATCAACTTTTGGCTGGCCCCTTCAGAAAGTAACTGTTCCTATGGAGACTCAGGGAGCTTGTGAAAAATCAGATGATGATTCGAAGAGTTGGGAGGTTGAAGAAGATGAATATGCATCACCTTTATCAAGGCCCGGTTGGCCTCTCCTTCGTGTAGCAACCTCCGAAACCATGAGTACTCCTGGTAGAAAGTTTGAAGCAAAAGATGTGTCTGTAGTCGAGTGGGTGATGGGACTTCCTAGTCGAACAACCTCAGTCAATCTGCAGCTTGCTAATGAATTGAAGTTCCTCATTAAGAAAGACTCACAAGGTTGTAGGATGTTTAGCTACGCCGAAATAAGGACCGCAACTTCTCAATTCTCCTCAGGAGGGTGCAGCAGTGTGTACAGAGGAGTTTTCCGATGTGGGAAATCCGTGGCGGTGAAGATTTTGAAAGTATACAAGGAAGCTTGGGATGATTTTTGCTTGGAAGCCAAATTTGTGTCTTCAATTAAGCATAAGCATATAGTATCTCTCATTGGCGTGTGTGTGGAAGATGGAAATCTTGTTCTAGTATATGAGCTCTTTCCTGGGGGGAGTTTGGAGGAGAACTTGCATGATTGTAATGATGGTTCTGTACTGCCATGGGAAGTGAGATTCAACGTGGCTGTTGCAGTTGCTGAGGCTCTGAATTATCTACACAATGAGTGCCCTCAGCCGATTATTCATAGAGACGTAAAATCTGCAAACATTCTTCTCTCAAGTGATCATCAGCCACAGTTATCAGATTTTGGGCTTGCTATATGGGGATCAGTGGATTCTAGTTATGTAATAAGTAATGATGTGGTGGGAACTTTCGGATACATGGCTCCAGAGTATTTCATGCAAGGGAGGGTCAGTGACAAGGTTGATGTGTACGCCTTTGGTGTAGTTCTCCTTGAACTACTATCAGGAAGAAAGCCAGTTGATGTTGAGGCTCCAAAAGGACAAGAGAGCTTGATCAAGTGGGCAAGAAAGCTATTAAAAATTGGAGATCTTAAAGCATTGCTGGATCCCAAGCTAAGAGCGGACTATGATATTGTCCAAATTCGTAGAATGTCTATGGCAGCAAGTCTTTGCACAAACCAGTCAGCTCAAATTCGTCCAAATATGAGGCAGGTACTGAAAATCTTAGGAGGGGAGACAGATGCCAATGAGTCAGACTATTATGAAGCCGAAGATGACAGTTTACTGGAAGCTGATTGGAATTCAGTTTCCGAAGTGTCCGAGACAAAGGATGATAGCATTTCACCATCAAGTTCTACCGATACAGCATCCAGTGCAGGAAAAACTCCCCGCCTTAAGTTGAAGGACTACTTAACTATACATGATCATCAATTTTGA

Protein Analysis

474

Amino Acids

52.75

Weight (kDa)

5.15

Isoelectric Point (pI)

43.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 140 - 403 4.4e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 143 - 363 1.9e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 303
Acc36I ACCTGC 1 cut(s) 1189
AccBSI CCGCTC 1 cut(s) 1109
AccI GTMKAC 1 cut(s) 501
AciI CCGC 5 cut(s) 16, 408, 482, 1109, 1378
AclWI GGATC 3 cut(s) 859, 1088, 1101
AcsI RAATTY 5 cut(s) 19, 539, 1128, 1179, 1288
AcuI CTGAAG 1 cut(s) 71
AfaI GTAC 5 cut(s) 241, 449, 681, 959, 1203
AfiI CCNNNNNNNGG 3 cut(s) 15, 402, 432
AflII CTTAAG 1 cut(s) 1382
AgsI TTSAA 8 cut(s) 164, 260, 346, 496, 552, 703, 983, 1390
AjnI CCWGG 2 cut(s) 244, 631
AjuI GAANNNNNNNTTGG 2 cut(s) 57, 89
AloI GAACNNNNNNTCC 2 cut(s) 594, 626
Alw21I GWGCWC 1 cut(s) 627
Alw26I GTCTC 4 cut(s) 104, 768, 1217, 1304
AlwI GGATC 3 cut(s) 859, 1088, 1101
AlwNI CAGNNNCTG 2 cut(s) 722, 1204
AoxI GGCC 3 cut(s) 80, 194, 203
ApeKI GCWGC 3 cut(s) 328, 438, 1148
ApoI RAATTY 5 cut(s) 19, 539, 1128, 1179, 1288
ArsI GACNNNNNNTTYG 2 cut(s) 257, 289
AspS9I GGNCC 4 cut(s) 6, 81, 195, 405
AsuC2I CCSGG 1 cut(s) 198
AsuHPI GGTGA 4 cut(s) 174, 301, 496, 1323
AsuII TTCGAA 1 cut(s) 146
AvaII GGWCC 2 cut(s) 6, 405
AxyI CCTNAGG 1 cut(s) 427
BaeGI GKGCMC 1 cut(s) 755
BamHI GGATCC 1 cut(s) 1093
BanII GRGCYC 1 cut(s) 627
BbsI GAAGAC 1 cut(s) 540
Bbv12I GWGCWC 1 cut(s) 627
BbvCI CCTCAGC 2 cut(s) 723, 756
BbvI GCAGC 3 cut(s) 340, 450, 1160
BccI CCATC 4 cut(s) 286, 593, 665, 1342
BciT130I CCWGG 2 cut(s) 246, 633
BciVI GTATCC 1 cut(s) 896
BclI TGATCA 3 cut(s) 808, 1041, 1411
BcnI CCSGG 1 cut(s) 198
BcoDI GTCTC 4 cut(s) 104, 768, 1217, 1304
BfaI CTAG 3 cut(s) 303, 614, 864
BfmI CTRYAG 2 cut(s) 276, 326
BfrI CTTAAG 1 cut(s) 1382
BfuAI ACCTGC 1 cut(s) 1189
BfuI GTATCC 1 cut(s) 896
BglI GCCNNNNNGGC 1 cut(s) 202
BglII AGATCT 1 cut(s) 1075
BisI GCNGC 3 cut(s) 329, 439, 1149
BlsI GCNGC 3 cut(s) 330, 440, 1150
BmcAI AGTACT 1 cut(s) 241
Bme1390I CCNGG 3 cut(s) 198, 246, 633
Bme18I GGWCC 2 cut(s) 6, 405
BmgT120I GGNCC 4 cut(s) 6, 81, 195, 405
BmiI GGNNCC 4 cut(s) 83, 912, 1020, 1095
BmrFI CCNGG 3 cut(s) 198, 246, 633
BmsI GCATC 3 cut(s) 188, 1219, 1364
BpiI GAAGAC 1 cut(s) 540
BpmI CTGGAG 1 cut(s) 897
Bpu10I CCTNAGC 2 cut(s) 723, 756
Bpu14I TTCGAA 1 cut(s) 146
BpuEI CTTGAG 1 cut(s) 787
BpuMI CCSGG 1 cut(s) 198
BsaBI GATNNNNATC 1 cut(s) 603
BsaJI CCNNGG 3 cut(s) 477, 632, 686
BsaXI ACNNNNNCTCC 2 cut(s) 925, 955
Bsc4I CCNNNNNNNGG 3 cut(s) 15, 402, 432
Bse1I ACTGG 4 cut(s) 1004, 1168, 1278, 1359
Bse21I CCTNAGG 1 cut(s) 427
Bse3DI GCAATG 1 cut(s) 1085
Bse8I GATNNNNATC 1 cut(s) 603
BseBI CCWGG 2 cut(s) 246, 633
BseDI CCNNGG 3 cut(s) 477, 632, 686
BseGI GGATG 4 cut(s) 387, 523, 1324, 1355
BseJI GATNNNNATC 1 cut(s) 603
BseLI CCNNNNNNNGG 3 cut(s) 15, 402, 432
BseMI GCAATG 1 cut(s) 1085
BseMII CTCAG 5 cut(s) 128, 330, 441, 714, 770
BseNI ACTGG 4 cut(s) 1004, 1168, 1278, 1359
BseRI GAGGAG 3 cut(s) 415, 468, 662
BseSI GKGCMC 1 cut(s) 755
BseXI GCAGC 3 cut(s) 340, 450, 1160
BsgI GTGCAG 2 cut(s) 457, 1383
BshFI GGCC 3 cut(s) 82, 196, 205
BsiHKAI GWGCWC 1 cut(s) 627
BsiSI CCGG 1 cut(s) 198
BslFI GGGAC 1 cut(s) 309
BslI CCNNNNNNNGG 3 cut(s) 15, 402, 432
BsmAI GTCTC 4 cut(s) 104, 768, 1217, 1304
BsmBI CGTCTC 1 cut(s) 768
BsmFI GGGAC 1 cut(s) 309
BsnI GGCC 3 cut(s) 82, 196, 205
Bsp119I TTCGAA 1 cut(s) 146
Bsp1286I GDGCHC 2 cut(s) 627, 755
Bsp1407I TGTACA 1 cut(s) 447
Bsp143I GATC 6 cut(s) 808, 851, 1041, 1075, 1093, 1411
Bsp19I CCATGG 1 cut(s) 686
BspACI CCGC 5 cut(s) 16, 408, 482, 1109, 1378
BspANI GGCC 3 cut(s) 82, 196, 205
BspCNI CTCAG 5 cut(s) 127, 329, 440, 715, 769
BspLI GGNNCC 4 cut(s) 83, 912, 1020, 1095
BspMAI CTGCAG 1 cut(s) 330
BspMI ACCTGC 1 cut(s) 1189
BspPI GGATC 3 cut(s) 859, 1088, 1101
BspT104I TTCGAA 1 cut(s) 146
BspTI CTTAAG 1 cut(s) 1382
BsrBI CCGCTC 1 cut(s) 1109
BsrDI GCAATG 1 cut(s) 1085
BsrGI TGTACA 1 cut(s) 447
BsrI ACTGG 4 cut(s) 1004, 1168, 1278, 1359
BssECI CCNNGG 3 cut(s) 477, 632, 686
BssMI GATC 6 cut(s) 808, 851, 1041, 1075, 1093, 1411
BssNAI GTATAC 1 cut(s) 502
BssT1I CCWWGG 1 cut(s) 686
Bst1107I GTATAC 1 cut(s) 502
Bst2UI CCWGG 2 cut(s) 246, 633
Bst4CI ACNGT 3 cut(s) 100, 822, 1268
Bst6I CTCTTC 1 cut(s) 143
BstAFI CTTAAG 1 cut(s) 1382
BstAPI GCANNNNNTGC 1 cut(s) 1361
BstAUI TGTACA 1 cut(s) 447
BstBI TTCGAA 1 cut(s) 146
BstC8I GCNNGC 3 cut(s) 80, 333, 840
BstDEI CTNAG 7 cut(s) 114, 316, 427, 723, 756, 1103, 1213
BstDSI CCRYGG 2 cut(s) 477, 686
BstF5I GGATG 4 cut(s) 387, 523, 1324, 1355
BstKTI GATC 6 cut(s) 811, 854, 1044, 1078, 1096, 1414
BstMAI GTCTC 4 cut(s) 104, 768, 1217, 1304
BstMBI GATC 6 cut(s) 808, 851, 1041, 1075, 1093, 1411
BstMWI GCNNNNNNNGC 2 cut(s) 202, 1361
BstNI CCWGG 2 cut(s) 246, 633
BstSCI CCNGG 3 cut(s) 196, 244, 631
BstSFI CTRYAG 2 cut(s) 276, 326
BstSLI GKGCMC 1 cut(s) 755
BstV1I GCAGC 3 cut(s) 340, 450, 1160
BstV2I GAAGAC 1 cut(s) 540
BstX2I RGATCY 2 cut(s) 1075, 1093
BstYI RGATCY 2 cut(s) 1075, 1093
BstZ17I GTATAC 1 cut(s) 502
Bsu36I CCTNAGG 1 cut(s) 427
BsuI GTATCC 1 cut(s) 896
BsuRI GGCC 3 cut(s) 82, 196, 205
BtgI CCRYGG 2 cut(s) 477, 686
BtsCI GGATG 4 cut(s) 387, 523, 1324, 1355
BtsI GCAGTG 1 cut(s) 448
BtsIMutI CAGTG 4 cut(s) 448, 861, 946, 1366
BveI ACCTGC 1 cut(s) 1189
Cac8I GCNNGC 3 cut(s) 80, 333, 840
CaiI CAGNNNCTG 2 cut(s) 722, 1204
Cfr13I GGNCC 4 cut(s) 6, 81, 195, 405
Csp6I GTAC 5 cut(s) 240, 448, 680, 958, 1202
CviAII CATG 6 cut(s) 235, 659, 687, 907, 925, 1409
CviQI GTAC 5 cut(s) 240, 448, 680, 958, 1202
DdeI CTNAG 7 cut(s) 114, 316, 427, 723, 756, 1103, 1213
DpnI GATC 6 cut(s) 810, 853, 1043, 1077, 1095, 1413
DpnII GATC 6 cut(s) 808, 851, 1041, 1075, 1093, 1411
DrdI GACNNNNNNGTC 1 cut(s) 303
DseDI GACNNNNNNGTC 1 cut(s) 303
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
Ecl136II GAGCTC 1 cut(s) 625
Eco130I CCWWGG 1 cut(s) 686
Eco24I GRGCYC 1 cut(s) 627
Eco47I GGWCC 2 cut(s) 6, 405
Eco53kI GAGCTC 1 cut(s) 625
Eco57I CTGAAG 1 cut(s) 71
Eco81I CCTNAGG 1 cut(s) 427
EcoICRI GAGCTC 1 cut(s) 625
EcoRI GAATTC 2 cut(s) 19, 1288
EcoRII CCWGG 2 cut(s) 244, 631
EcoT14I CCWWGG 1 cut(s) 686
EcoT22I ATGCAT 1 cut(s) 181
EcoT38I GRGCYC 1 cut(s) 627
ErhI CCWWGG 1 cut(s) 686
Esp3I CGTCTC 1 cut(s) 768
FaeI CATG 6 cut(s) 238, 662, 690, 910, 928, 1412
FalI AAGNNNNNCTT 2 cut(s) 1382, 1414
FaqI GGGAC 1 cut(s) 309
FatI CATG 6 cut(s) 234, 658, 686, 906, 924, 1408
FauI CCCGC 1 cut(s) 1385
FbaI TGATCA 3 cut(s) 808, 1041, 1411
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 3 cut(s) 329, 439, 1149
FokI GGATG 4 cut(s) 394, 530, 1331, 1342
FriOI GRGCYC 1 cut(s) 627
Fsp4HI GCNGC 3 cut(s) 329, 439, 1149
FspBI CTAG 3 cut(s) 303, 614, 864
GluI GCNGC 3 cut(s) 329, 439, 1149
GsuI CTGGAG 1 cut(s) 897
HaeIII GGCC 3 cut(s) 82, 196, 205
HapII CCGG 1 cut(s) 198
Hin1II CATG 6 cut(s) 238, 662, 690, 910, 928, 1412
HindIII AAGCTT 1 cut(s) 510
HinfI GANTC 8 cut(s) 29, 65, 112, 143, 365, 699, 860, 1238
HpaII CCGG 1 cut(s) 198
HphI GGTGA 4 cut(s) 174, 301, 496, 1323
Hpy166II GTNNAC 4 cut(s) 448, 502, 958, 1271
Hpy188III TCNNGA 3 cut(s) 429, 914, 993
Hpy8I GTNNAC 4 cut(s) 448, 502, 958, 1271
HpyAV CCTTC 3 cut(s) 95, 221, 1384
HpyCH4III ACNGT 3 cut(s) 100, 822, 1268
HpyCH4IV ACGT 2 cut(s) 705, 777
HpyCH4V TGCA 9 cut(s) 179, 328, 438, 658, 716, 788, 928, 1161, 1364
HpyF10VI GCNNNNNNNGC 2 cut(s) 202, 1361
HpyF3I CTNAG 7 cut(s) 114, 316, 427, 723, 756, 1103, 1213
HpySE526I ACGT 2 cut(s) 705, 777
Hsp92II CATG 6 cut(s) 238, 662, 690, 910, 928, 1412
Ksp22I TGATCA 3 cut(s) 808, 1041, 1411
Kzo9I GATC 6 cut(s) 808, 851, 1041, 1075, 1093, 1411
LmnI GCTCC 3 cut(s) 119, 916, 1024
Lsp1109I GCAGC 3 cut(s) 340, 450, 1160
LweI GCATC 3 cut(s) 188, 1219, 1364
MaeI CTAG 3 cut(s) 303, 614, 864
MaeII ACGT 2 cut(s) 705, 777
MaeIII GTNAC 2 cut(s) 94, 941
MalI GATC 6 cut(s) 810, 853, 1043, 1077, 1095, 1413
MbiI CCGCTC 1 cut(s) 1109
MboI GATC 6 cut(s) 808, 851, 1041, 1075, 1093, 1411
MboII GAAGA 9 cut(s) 160, 176, 179, 499, 540, 608, 788, 1008, 1271
MflI RGATCY 2 cut(s) 1075, 1093
MhlI GDGCHC 2 cut(s) 627, 755
MlyI GAGTC 3 cut(s) 106, 359, 1247
Mph1103I ATGCAT 1 cut(s) 181
MseI TTAA 7 cut(s) 47, 357, 555, 1064, 1080, 1383, 1400
MslI CAYNNNNRTG 1 cut(s) 584
MspCI CTTAAG 1 cut(s) 1382
MspI CCGG 1 cut(s) 198
MspR9I CCNGG 3 cut(s) 198, 246, 633
MvaI CCWGG 2 cut(s) 246, 633
MwoI GCNNNNNNNGC 2 cut(s) 202, 1361
NciI CCSGG 1 cut(s) 198
NcoI CCATGG 1 cut(s) 686
NdeII GATC 6 cut(s) 808, 851, 1041, 1075, 1093, 1411
NlaIII CATG 6 cut(s) 238, 662, 690, 910, 928, 1412
NlaIV GGNNCC 4 cut(s) 83, 912, 1020, 1095
NmuCI GTSAC 1 cut(s) 941
NsiI ATGCAT 1 cut(s) 181
NspV TTCGAA 1 cut(s) 146
PfeI GAWTC 5 cut(s) 29, 65, 143, 699, 860
PkrI GCNGC 3 cut(s) 330, 440, 1150
PleI GAGTC 3 cut(s) 106, 359, 1246
PpsI GAGTC 3 cut(s) 106, 359, 1246
Psp124BI GAGCTC 1 cut(s) 627
Psp6I CCWGG 2 cut(s) 244, 631
PspGI CCWGG 2 cut(s) 244, 631
PspN4I GGNNCC 4 cut(s) 83, 912, 1020, 1095
PspPI GGNCC 4 cut(s) 6, 81, 195, 405
PsrI GAACNNNNNNTAC 2 cut(s) 658, 690
PstI CTGCAG 1 cut(s) 330
PstNI CAGNNNCTG 2 cut(s) 722, 1204
PsuI RGATCY 2 cut(s) 1075, 1093
RsaI GTAC 5 cut(s) 241, 449, 681, 959, 1203
RsaNI GTAC 5 cut(s) 240, 448, 680, 958, 1202
RseI CAYNNNNRTG 1 cut(s) 584
SacI GAGCTC 1 cut(s) 627
SaqAI TTAA 7 cut(s) 47, 357, 555, 1064, 1080, 1383, 1400
SatI GCNGC 3 cut(s) 329, 439, 1149
Sau3AI GATC 6 cut(s) 808, 851, 1041, 1075, 1093, 1411
Sau96I GGNCC 4 cut(s) 6, 81, 195, 405
ScaI AGTACT 1 cut(s) 241
SchI GAGTC 3 cut(s) 106, 359, 1247
ScrFI CCNGG 3 cut(s) 198, 246, 633
SduI GDGCHC 2 cut(s) 627, 755
SfaNI GCATC 3 cut(s) 188, 1219, 1364
SfcI CTRYAG 2 cut(s) 276, 326
SfiI GGCCNNNNNGGCC 1 cut(s) 202
SfuI TTCGAA 1 cut(s) 146
SinI GGWCC 2 cut(s) 6, 405
SmiMI CAYNNNNRTG 1 cut(s) 584
SmlI CTYRAG 2 cut(s) 802, 1382
SmoI CTYRAG 2 cut(s) 802, 1382
SsiI CCGC 5 cut(s) 16, 408, 482, 1109, 1378
SspMI CTAG 3 cut(s) 303, 614, 864
SstI GAGCTC 1 cut(s) 627
StyD4I CCNGG 3 cut(s) 196, 244, 631
StyI CCWWGG 1 cut(s) 686
TaaI ACNGT 3 cut(s) 100, 822, 1268
TaiI ACGT 2 cut(s) 708, 780
TaqI TCGA 3 cut(s) 146, 282, 307
TatI WGTACW 3 cut(s) 239, 447, 679
TfiI GAWTC 5 cut(s) 29, 65, 143, 699, 860
Tru1I TTAA 7 cut(s) 47, 357, 555, 1064, 1080, 1383, 1400
Tru9I TTAA 7 cut(s) 47, 357, 555, 1064, 1080, 1383, 1400
TscAI CASTG 4 cut(s) 448, 861, 946, 1366
TseFI GTSAC 1 cut(s) 941
TseI GCWGC 3 cut(s) 328, 438, 1148
Tsp45I GTSAC 1 cut(s) 941
TspDTI ATGAA 6 cut(s) 12, 186, 354, 758, 913, 1266
TspGWI ACGGA 1 cut(s) 466
TspRI CASTG 4 cut(s) 448, 861, 946, 1366
Vha464I CTTAAG 1 cut(s) 1382
VpaK11BI GGWCC 2 cut(s) 6, 405
XapI RAATTY 5 cut(s) 19, 539, 1128, 1179, 1288
XmiI GTMKAC 1 cut(s) 501
XspI CTAG 3 cut(s) 303, 614, 864
ZrmI AGTACT 1 cut(s) 241
Zsp2I ATGCAT 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.