Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001023

Physical Location & Seq

Genomic Coordinates Forward (+)

67029755 .. 67033888

Gene Structure 4134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00216330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGATACTAGAGGAGGTATTCAAGGATTTCAAGAAGAACAAGAAGAATAATAATAATAATAAGAAGAAGAATGTGGTCTTGGTTGGGATTAAAATTGATGGCCAAAGCAGAGAGCTTCTTGGATGGGCTCTCGCGAAAGCTGCTGAAGCCGGAGACTGCGTTATTGCGGTTCATGTCTGCCGAAATTCTGTCTTGAACTCTTCATTAGATCAGTCCGTGAAGGACAAGCCAATAGTGGATAGTTATGTAGAGGCTTATGAAGGGTTATGTAATATAAAAAAGGTAGACCTCATCAGTCAGGTATTGACAGGAAGCTCAATCCCAAAGGCGCTAGTGAAAGAGGCAAAGAACCATGAAACTATGGCTGTAGTTGTAGGCACAAGCAAGGCAAGCATTCAAGGGGTTAAGGATTCTACGGCGAAATACTGTGCTAAGAAATTGCCTCCAAGGACAGATGTGGTGGCAATCAACAAGGGGGAAATTGTATACAGAAGATGTACAAGTAATGAACAATCAGGTCTAACAGGTGATGAGCCAAGACTAAGTATGAGTCAGATTTATAGTTGTATTCCTAGAGGAAAAAGCCAATCTGAATTTGGTGACTCTGAGGAGGATACAGAAACTGTTAAATCATTTTCTGACAAGGCTGAGAGCTCCCAAGCTAGTCCTATGCGTGGCAATGAAGACCTGAAGAAAGAACACAAGAGAGCTCGTAACAGATCATCTTCTTCACTTGGTATAGGAGAGTCTGCAGAGAAGTGCCTAGGATGGCCTCTGCAAAGAGCTAGTTCTGTGAGTACACAAATCCCGGGCACAAGGAACATGTCTGTGGTGCAATGGGTGATGAGCTTACCAGATCGATCTCCACAGCAATCTCCTCAATGTTCAATCATAAGAGAAACTTCCTTTGAAGGAGGTATCAAGAGTACTTTTGCTTTGGATGCTCTACCAAATGAGTTAAAGAGTCTCCTGAAAACAAATCGTTGCAGATGGTTCAGTCACGAGGTTCTGAAAACTGCAACCTCAAATTTCTCCTCAGAAAATCTTATTGGGAAAGGAGGATGCAACCTTGTGTTCAAGGGAATTCTACCAGACGGCAAGAAAGTGGCAGTAAAGCTTATGAAGTCATCCAAAGCAAAGTGGAAGGATTTTGCTCATGAAGTAGATATCATCTCCTCGTTGAGGCACGAGCACATCATGCCTCTGCTTGGATTCTGCTCTGAAGAGAATTTTCTAATATCTGTTTATGATTTCTCGCCTAAAGGAAGCTTAGAGGAGAATTTACATGGCAAGAATAAAGGCAAACCTGTATTGTCATGGGAATTGAGATTTAATGCTGCTGTTGGGATTGCTGAAGCTCTAAATTACCTGCACAACGAATGTTCTCCACCAGTTATTCATAGAGATGTCAAGTCTTCAAACATTCTGCTGACACCAGAGCTAGAACCACGGTTATCTGATTTCGGCCTTGCAATATGGGGACCAACAACTACGTCTTCCCTGACTGAATGCACTGTAGAGGGAACATTTGGTTATCTTGCCCCTGAATATTTCATGTATGGAAAAATCAGTGACAAGATCGATGTCTATGCCTTTGGTGTAGTCCTGCTTGAACTATTATCAGGAAGAACACCTATTGGCTCTGACACTAACAAACAACAAGAAAGCTTGGTCATGTGGGCAAAGCCTAAACTAGAGAATGGAGATGTACATGACATACCGGATCCAAATTTCGATGGAAAGTTTGATGAGATTCAGGTACTGAGAATGTTTCAAGCAGCAAAACTGTGTATCACACGCTCAGCTAGGCTTCGCCCTAAAATGAGTCAGATAGTGAAGCTCCTAAAAGGGGATCCAGATGTGGAAACGTATGTGAACCCTCCATATTTTGATGTCGAGGATTCAGAAAACCGAGATGACAATGATGATGAAGTTTATCCAAATTCAAGTGCAGAGTTACATTTGAACCTTGCACTGCTTGATGTTGACGATGATGATACAACATCATTCAGTAGTGTGGAGCAGAGCAACCGTTCTTGGGAAGAATATTTGAAAGGAAGATGGAGCAGATCATCAAGTTTTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Usp

Protein Analysis

695

Amino Acids

77.18

Weight (kDa)

6.16

Isoelectric Point (pI)

45.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	26 - 147	7.2e-06	Universal stress protein family
Pkinase	PF00069	345 - 556	1.5e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	347 - 614	1.9e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16750 AT2G16750 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030 AT4G35030
fragaria_vesca	FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g01230 FvH4_2g38170 FvH4_2g38170
malus_domestica	MD05G1121300.v1.1 MD08G1010200.v1.1 MD15G1010100.v1.1
prunus_persica	Prupe.1G362600_v2.0.a1 Prupe.8G165200_v2.0.a1 Prupe.8G165200_v2.0.a1
pyrus_communis	pycom05g11550 pycom10g10680 pycom15g00830
rosa_chinensis	RchiOBHm_Chr6g0251891 RchiOBHm_Chr6g0303311
rosa_laevigata	RLG00000011093 RLG00000015422
rosa_multiflora	Rmu_sc0007252.1_g000005 Rmu_sc0027227.1_g000001 Rmu_ssc0000303.1_g000011
rosa_roxburghii	Rroxscaffold_7G00164880 Rroxscaffold_7G00216330
rosa_rugosa	Rorug05G0504900 Rorug05G0504900 Rorug06G0320200 Rorug06G0320300 Rorug06G0320300 Rorug06G0320300 Rorug06G0320300
rosa_samantha	Rh6AG016000 Rh6AG434700 Rh6BG014000 Rh6BG468400 Rh6CG010900 Rh6CG446700 Rh6DG012100 Rh6DG433500
rosa_wichuraiana	Rw6G001530 Rw6G037640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1377
AccI	GTMKAC	2 cut(s)	285, 486
AccII	CGCG	1 cut(s)	134
AciI	CCGC	1 cut(s)	167
AclWI	GGATC	4 cut(s)	1718, 1731, 1847, 1860
AcoI	YGGCCR	1 cut(s)	100
AcsI	RAATTY	8 cut(s)	184, 593, 1027, 1083, 1228, 1279, 1729, 1942
AcuI	CTGAAG	4 cut(s)	165, 710, 1242, 1374
AfaI	GTAC	5 cut(s)	499, 799, 928, 1710, 1761
AfiI	CCNNNNNNNGG	5 cut(s)	674, 1182, 1208, 1849, 2038
AflIII	ACRYGT	1 cut(s)	822
AjuI	GAANNNNNNNTTGG	4 cut(s)	62, 94, 1032, 1064
Alw21I	GWGCWC	3 cut(s)	656, 712, 1194
Alw26I	GTCTC	2 cut(s)	147, 971
AlwI	GGATC	4 cut(s)	1718, 1731, 1847, 1860
AlwNI	CAGNNNCTG	2 cut(s)	623, 1762
Ama87I	CYCGRG	1 cut(s)	808
AoxI	GGCC	3 cut(s)	100, 770, 1465
ApeKI	GCWGC	3 cut(s)	140, 1337, 1778
ApoI	RAATTY	8 cut(s)	184, 593, 1027, 1083, 1228, 1279, 1729, 1942
AspA2I	CCTAGG	1 cut(s)	763
AspLEI	GCGC	1 cut(s)	331
AspS9I	GGNCC	1 cut(s)	1481
AsuC2I	CCSGG	2 cut(s)	809, 810
AsuHPI	GGTGA	3 cut(s)	539, 611, 853
AvaI	CYCGRG	1 cut(s)	808
AvaII	GGWCC	1 cut(s)	1481
AvrII	CCTAGG	1 cut(s)	763
BaeGI	GKGCMC	1 cut(s)	815
BalI	TGGCCA	1 cut(s)	102
BamHI	GGATCC	2 cut(s)	1723, 1852
BanII	GRGCYC	3 cut(s)	130, 656, 712
BauI	CACGAG	2 cut(s)	1001, 1187
BbsI	GAAGAC	3 cut(s)	690, 1407, 1488
Bbv12I	GWGCWC	3 cut(s)	656, 712, 1194
BbvI	GCAGC	3 cut(s)	127, 1324, 1790
BccI	CCATC	6 cut(s)	92, 117, 762, 984, 1730, 2055
BceAI	ACGGC	2 cut(s)	432, 1111
BcgI	CGANNNNNNTGC	2 cut(s)	1571, 1605
BciVI	GTATCC	1 cut(s)	607
BcnI	CCSGG	2 cut(s)	809, 810
BcoDI	GTCTC	2 cut(s)	147, 971
BfaI	CTAG	9 cut(s)	8, 332, 573, 663, 764, 786, 1442, 1694, 1806
BfmI	CTRYAG	3 cut(s)	366, 750, 1515
BfoI	RGCGCY	1 cut(s)	332
BfuAI	ACCTGC	1 cut(s)	1377
BfuI	GTATCC	1 cut(s)	607
BisI	GCNGC	3 cut(s)	141, 1338, 1779
BlnI	CCTAGG	1 cut(s)	763
BlpI	GCTNAGC	1 cut(s)	1801
BlsI	GCNGC	3 cut(s)	142, 1339, 1780
BmcAI	AGTACT	1 cut(s)	928
Bme1390I	CCNGG	2 cut(s)	809, 810
Bme18I	GGWCC	1 cut(s)	1481
BmeT110I	CYCGRG	1 cut(s)	808
BmgT120I	GGNCC	1 cut(s)	1481
BmiI	GGNNCC	3 cut(s)	1482, 1725, 1854
BmrFI	CCNGG	2 cut(s)	809, 810
BmsI	GCATC	2 cut(s)	931, 1052
BpiI	GAAGAC	3 cut(s)	690, 1407, 1488
Bpu1102I	GCTNAGC	1 cut(s)	1801
BpuMI	CCSGG	2 cut(s)	809, 810
Bsa29I	ATCGAT	2 cut(s)	859, 1581
BsaJI	CCNNGG	4 cut(s)	446, 763, 808, 1448
BsaWI	WCCGGW	1 cut(s)	1720
BsaXI	ACNNNNNCTCC	2 cut(s)	144, 174
Bsc4I	CCNNNNNNNGG	5 cut(s)	674, 1182, 1208, 1849, 2038
Bse1I	ACTGG	1 cut(s)	1391
Bse3DI	GCAATG	2 cut(s)	685, 842
BseCI	ATCGAT	2 cut(s)	859, 1581
BseDI	CCNNGG	4 cut(s)	446, 763, 808, 1448
BseGI	GGATG	5 cut(s)	128, 773, 946, 1067, 1127
BseLI	CCNNNNNNNGG	5 cut(s)	674, 1182, 1208, 1849, 2038
BseMI	GCAATG	2 cut(s)	685, 842
BseMII	CTCAG	5 cut(s)	597, 639, 1050, 1754, 1815
BseNI	ACTGG	1 cut(s)	1391
BseRI	GAGGAG	6 cut(s)	26, 623, 867, 1024, 1165, 1289
BseSI	GKGCMC	1 cut(s)	815
BseXI	GCAGC	3 cut(s)	127, 1324, 1790
BsgI	GTGCAG	2 cut(s)	1355, 1971
Bsh1236I	CGCG	1 cut(s)	134
BshFI	GGCC	3 cut(s)	102, 772, 1467
BshVI	ATCGAT	2 cut(s)	859, 1581
BsiHKAI	GWGCWC	3 cut(s)	656, 712, 1194
BsiHKCI	CYCGRG	1 cut(s)	808
BsiSI	CCGG	3 cut(s)	150, 809, 1721
BslFI	GGGAC	1 cut(s)	1494
BslI	CCNNNNNNNGG	5 cut(s)	674, 1182, 1208, 1849, 2038
BsmAI	GTCTC	2 cut(s)	147, 971
BsmFI	GGGAC	1 cut(s)	1494
BsmI	GAATGC	2 cut(s)	393, 1514
BsnI	GGCC	3 cut(s)	102, 772, 1467
BsoBI	CYCGRG	1 cut(s)	808
Bsp1286I	GDGCHC	5 cut(s)	130, 656, 712, 815, 1194
Bsp1407I	TGTACA	2 cut(s)	497, 1708
Bsp143I	GATC	8 cut(s)	208, 719, 856, 860, 1578, 1723, 1852, 2069
Bsp1720I	GCTNAGC	1 cut(s)	1801
Bsp68I	TCGCGA	1 cut(s)	134
BspACI	CCGC	1 cut(s)	167
BspANI	GGCC	3 cut(s)	102, 772, 1467
BspCNI	CTCAG	5 cut(s)	598, 640, 1049, 1755, 1814
BspDI	ATCGAT	2 cut(s)	859, 1581
BspFNI	CGCG	1 cut(s)	134
BspHI	TCATGA	1 cut(s)	1156
BspLI	GGNNCC	3 cut(s)	1482, 1725, 1854
BspMAI	CTGCAG	1 cut(s)	754
BspMI	ACCTGC	1 cut(s)	1377
BspPI	GGATC	4 cut(s)	1718, 1731, 1847, 1860
BsrDI	GCAATG	2 cut(s)	685, 842
BsrGI	TGTACA	2 cut(s)	497, 1708
BsrI	ACTGG	1 cut(s)	1391
BssECI	CCNNGG	4 cut(s)	446, 763, 808, 1448
BssMI	GATC	8 cut(s)	208, 719, 856, 860, 1578, 1723, 1852, 2069
BssNAI	GTATAC	1 cut(s)	487
BssSI	CACGAG	2 cut(s)	1001, 1187
BssT1I	CCWWGG	2 cut(s)	446, 763
Bst1107I	GTATAC	1 cut(s)	487
Bst2BI	CACGAG	2 cut(s)	1001, 1187
Bst4CI	ACNGT	6 cut(s)	428, 625, 1452, 1516, 1788, 2033
Bst6I	CTCTTC	2 cut(s)	205, 1218
BstAPI	GCANNNNNTGC	1 cut(s)	1198
BstAUI	TGTACA	2 cut(s)	497, 1708
BstC8I	GCNNGC	1 cut(s)	391
BstDEI	CTNAG	8 cut(s)	432, 542, 606, 648, 1036, 1270, 1763, 1801
BstDSI	CCRYGG	1 cut(s)	1448
BstENI	CCTNNNNNAGG	1 cut(s)	1180
BstF5I	GGATG	5 cut(s)	128, 773, 946, 1067, 1127
BstFNI	CGCG	1 cut(s)	134
BstH2I	RGCGCY	1 cut(s)	332
BstHHI	GCGC	1 cut(s)	331
BstKTI	GATC	8 cut(s)	211, 722, 859, 863, 1581, 1726, 1855, 2072
BstMAI	GTCTC	2 cut(s)	147, 971
BstMBI	GATC	8 cut(s)	208, 719, 856, 860, 1578, 1723, 1852, 2069
BstMWI	GCNNNNNNNGC	5 cut(s)	140, 146, 390, 941, 1198
BstNSI	RCATGY	1 cut(s)	826
BstSCI	CCNGG	2 cut(s)	807, 808
BstSFI	CTRYAG	3 cut(s)	366, 750, 1515
BstSLI	GKGCMC	1 cut(s)	815
BstUI	CGCG	1 cut(s)	134
BstV1I	GCAGC	3 cut(s)	127, 1324, 1790
BstV2I	GAAGAC	3 cut(s)	690, 1407, 1488
BstX2I	RGATCY	2 cut(s)	1723, 1852
BstYI	RGATCY	2 cut(s)	1723, 1852
BstZ17I	GTATAC	1 cut(s)	487
Bsu15I	ATCGAT	2 cut(s)	859, 1581
BsuI	GTATCC	1 cut(s)	607
BsuRI	GGCC	3 cut(s)	102, 772, 1467
BsuTUI	ATCGAT	2 cut(s)	859, 1581
BtgI	CCRYGG	1 cut(s)	1448
BtsCI	GGATG	5 cut(s)	128, 773, 946, 1067, 1127
BtsI	GCAGTG	1 cut(s)	1973
BtsIMutI	CAGTG	3 cut(s)	1512, 1576, 1973
BtuMI	TCGCGA	1 cut(s)	134
BveI	ACCTGC	1 cut(s)	1377
Cac8I	GCNNGC	1 cut(s)	391
CaiI	CAGNNNCTG	2 cut(s)	623, 1762
CciI	TCATGA	1 cut(s)	1156
CfoI	GCGC	1 cut(s)	331
Cfr13I	GGNCC	1 cut(s)	1481
Cfr9I	CCCGGG	1 cut(s)	808
ClaI	ATCGAT	2 cut(s)	859, 1581
Csp6I	GTAC	5 cut(s)	498, 798, 927, 1709, 1760
CviQI	GTAC	5 cut(s)	498, 798, 927, 1709, 1760
DdeI	CTNAG	8 cut(s)	432, 542, 606, 648, 1036, 1270, 1763, 1801
DpnI	GATC	8 cut(s)	210, 721, 858, 862, 1580, 1725, 1854, 2071
DpnII	GATC	8 cut(s)	208, 719, 856, 860, 1578, 1723, 1852, 2069
EaeI	YGGCCR	1 cut(s)	100
Eam1104I	CTCTTC	2 cut(s)	205, 1218
EarI	CTCTTC	2 cut(s)	205, 1218
Ecl136II	GAGCTC	2 cut(s)	654, 710
Eco130I	CCWWGG	2 cut(s)	446, 763
Eco24I	GRGCYC	3 cut(s)	130, 656, 712
Eco32I	GATATC	1 cut(s)	1168
Eco47I	GGWCC	1 cut(s)	1481
Eco53kI	GAGCTC	2 cut(s)	654, 710
Eco57I	CTGAAG	4 cut(s)	165, 710, 1242, 1374
Eco88I	CYCGRG	1 cut(s)	808
EcoICRI	GAGCTC	2 cut(s)	654, 710
EcoNI	CCTNNNNNAGG	1 cut(s)	1180
EcoRI	GAATTC	1 cut(s)	1083
EcoRV	GATATC	1 cut(s)	1168
EcoT14I	CCWWGG	2 cut(s)	446, 763
EcoT38I	GRGCYC	3 cut(s)	130, 656, 712
ErhI	CCWWGG	2 cut(s)	446, 763
FalI	AAGNNNNNCTT	2 cut(s)	886, 918
FaqI	GGGAC	1 cut(s)	1494
FblI	GTMKAC	2 cut(s)	285, 486
Fnu4HI	GCNGC	3 cut(s)	141, 1338, 1779
FokI	GGATG	5 cut(s)	135, 780, 953, 1074, 1114
FriOI	GRGCYC	3 cut(s)	130, 656, 712
Fsp4HI	GCNGC	3 cut(s)	141, 1338, 1779
FspBI	CTAG	9 cut(s)	8, 332, 573, 663, 764, 786, 1442, 1694, 1806
GlaI	GCGC	1 cut(s)	330
GluI	GCNGC	3 cut(s)	141, 1338, 1779
HaeII	RGCGCY	1 cut(s)	332
HaeIII	GGCC	3 cut(s)	102, 772, 1467
HapII	CCGG	3 cut(s)	150, 809, 1721
HhaI	GCGC	1 cut(s)	331
Hin6I	GCGC	1 cut(s)	329
HinP1I	GCGC	1 cut(s)	329
HincII	GTYRAC	1 cut(s)	1987
HindII	GTYRAC	1 cut(s)	1987
HindIII	AAGCTT	3 cut(s)	1115, 1267, 1666
HinfI	GANTC	9 cut(s)	410, 550, 602, 746, 964, 1212, 1753, 1825, 1901
HpaII	CCGG	3 cut(s)	150, 809, 1721
HphI	GGTGA	3 cut(s)	539, 611, 853
Hpy166II	GTNNAC	5 cut(s)	286, 487, 800, 1876, 1987
Hpy188III	TCNNGA	9 cut(s)	31, 133, 193, 922, 970, 1001, 1157, 1623, 1856
Hpy8I	GTNNAC	5 cut(s)	286, 487, 800, 1876, 1987
HpyAV	CCTTC	4 cut(s)	214, 254, 905, 1138
HpyCH4III	ACNGT	6 cut(s)	428, 625, 1452, 1516, 1788, 2033
HpyCH4IV	ACGT	2 cut(s)	1493, 1868
HpyF10VI	GCNNNNNNNGC	5 cut(s)	140, 146, 390, 941, 1198
HpyF3I	CTNAG	8 cut(s)	432, 542, 606, 648, 1036, 1270, 1763, 1801
HpySE526I	ACGT	2 cut(s)	1493, 1868
HspAI	GCGC	1 cut(s)	329
Kzo9I	GATC	8 cut(s)	208, 719, 856, 860, 1578, 1723, 1852, 2069
LmnI	GCTCC	4 cut(s)	659, 1845, 2020, 2064
Lsp1109I	GCAGC	3 cut(s)	127, 1324, 1790
LweI	GCATC	2 cut(s)	931, 1052
MaeI	CTAG	9 cut(s)	8, 332, 573, 663, 764, 786, 1442, 1694, 1806
MaeII	ACGT	2 cut(s)	1493, 1868
MaeIII	GTNAC	5 cut(s)	599, 713, 998, 1571, 1956
MalI	GATC	8 cut(s)	210, 721, 858, 862, 1580, 1725, 1854, 2071
MboI	GATC	8 cut(s)	208, 719, 856, 860, 1578, 1723, 1852, 2069
MflI	RGATCY	2 cut(s)	1723, 1852
MhlI	GDGCHC	5 cut(s)	130, 656, 712, 815, 1194
MlsI	TGGCCA	1 cut(s)	102
MluNI	TGGCCA	1 cut(s)	102
MlyI	GAGTC	5 cut(s)	559, 596, 755, 973, 1834
Mox20I	TGGCCA	1 cut(s)	102
MscI	TGGCCA	1 cut(s)	102
MseI	TTAA	5 cut(s)	90, 405, 627, 959, 1332
MslI	CAYNNNNRTG	2 cut(s)	827, 1404
Msp20I	TGGCCA	1 cut(s)	102
MspI	CCGG	3 cut(s)	150, 809, 1721
MspR9I	CCNGG	2 cut(s)	809, 810
Mva1269I	GAATGC	2 cut(s)	393, 1514
MvnI	CGCG	1 cut(s)	134
MwoI	GCNNNNNNNGC	5 cut(s)	140, 146, 390, 941, 1198
NciI	CCSGG	2 cut(s)	809, 810
NdeII	GATC	8 cut(s)	208, 719, 856, 860, 1578, 1723, 1852, 2069
NlaIV	GGNNCC	3 cut(s)	1482, 1725, 1854
NmuCI	GTSAC	3 cut(s)	599, 998, 1571
NruI	TCGCGA	1 cut(s)	134
NspI	RCATGY	1 cut(s)	826
PagI	TCATGA	1 cut(s)	1156
PciI	ACATGT	1 cut(s)	822
PctI	GAATGC	2 cut(s)	393, 1514
PfeI	GAWTC	4 cut(s)	410, 1212, 1753, 1901
PkrI	GCNGC	3 cut(s)	142, 1339, 1780
PleI	GAGTC	5 cut(s)	558, 596, 754, 972, 1833
PpsI	GAGTC	5 cut(s)	558, 596, 754, 972, 1833
PscI	ACATGT	1 cut(s)	822
Psp124BI	GAGCTC	2 cut(s)	656, 712
PspN4I	GGNNCC	3 cut(s)	1482, 1725, 1854
PspPI	GGNCC	1 cut(s)	1481
PstI	CTGCAG	1 cut(s)	754
PstNI	CAGNNNCTG	2 cut(s)	623, 1762
PsuI	RGATCY	2 cut(s)	1723, 1852
RruI	TCGCGA	1 cut(s)	134
RsaI	GTAC	5 cut(s)	499, 799, 928, 1710, 1761
RsaNI	GTAC	5 cut(s)	498, 798, 927, 1709, 1760
RseI	CAYNNNNRTG	2 cut(s)	827, 1404
SacI	GAGCTC	2 cut(s)	656, 712
SaqAI	TTAA	5 cut(s)	90, 405, 627, 959, 1332
SatI	GCNGC	3 cut(s)	141, 1338, 1779
Sau3AI	GATC	8 cut(s)	208, 719, 856, 860, 1578, 1723, 1852, 2069
Sau96I	GGNCC	1 cut(s)	1481
ScaI	AGTACT	1 cut(s)	928
SchI	GAGTC	5 cut(s)	559, 596, 755, 973, 1834
ScrFI	CCNGG	2 cut(s)	809, 810
SduI	GDGCHC	5 cut(s)	130, 656, 712, 815, 1194
SfaNI	GCATC	2 cut(s)	931, 1052
SfcI	CTRYAG	3 cut(s)	366, 750, 1515
SinI	GGWCC	1 cut(s)	1481
SmaI	CCCGGG	1 cut(s)	810
SmiMI	CAYNNNNRTG	2 cut(s)	827, 1404
SsiI	CCGC	1 cut(s)	167
SspI	AATATT	2 cut(s)	1550, 2048
SspMI	CTAG	9 cut(s)	8, 332, 573, 663, 764, 786, 1442, 1694, 1806
SstI	GAGCTC	2 cut(s)	656, 712
StyD4I	CCNGG	2 cut(s)	807, 808
StyI	CCWWGG	2 cut(s)	446, 763
TaaI	ACNGT	6 cut(s)	428, 625, 1452, 1516, 1788, 2033
TaiI	ACGT	2 cut(s)	1496, 1871
TaqI	TCGA	4 cut(s)	859, 1581, 1734, 1896
TatI	WGTACW	4 cut(s)	497, 797, 926, 1708
TfiI	GAWTC	4 cut(s)	410, 1212, 1753, 1901
Tru1I	TTAA	5 cut(s)	90, 405, 627, 959, 1332
Tru9I	TTAA	5 cut(s)	90, 405, 627, 959, 1332
TscAI	CASTG	3 cut(s)	1519, 1576, 1980
TseFI	GTSAC	3 cut(s)	599, 998, 1571
TseI	GCWGC	3 cut(s)	140, 1337, 1778
Tsp45I	GTSAC	3 cut(s)	599, 998, 1571
TspGWI	ACGGA	1 cut(s)	205
TspMI	CCCGGG	1 cut(s)	808
TspRI	CASTG	3 cut(s)	1519, 1576, 1980
VpaK11BI	GGWCC	1 cut(s)	1481
XagI	CCTNNNNNAGG	1 cut(s)	1180
XapI	RAATTY	8 cut(s)	184, 593, 1027, 1083, 1228, 1279, 1729, 1942
XceI	RCATGY	1 cut(s)	826
XcmI	CCANNNNNNNNNTGG	1 cut(s)	593
XmaI	CCCGGG	1 cut(s)	808
XmaJI	CCTAGG	1 cut(s)	763
XmiI	GTMKAC	2 cut(s)	285, 486
XspI	CTAG	9 cut(s)	8, 332, 573, 663, 764, 786, 1442, 1694, 1806
ZrmI	AGTACT	1 cut(s)	928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.