MD08G1010200.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
755484 .. 757389
1906 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1010200.v1.1.491

Sequence Viewer

Length: 1464 bp
ATGCCAGAACCAGCTCTTGGTTGGCCACTTCGCCGGAAACTTGATAGCTTCGACATGTTTTCCGAGAGAGAGGATGATGAATCACCATTGTCGAGGCCGGGTTGGCCGCTCTTGCGGATAGCTGCTGCCTCAGCGGAAGCTATGAGTACTACTCCTATGAGAGAATTTAAATCCAGGGAAAATATGTCCGTGGTACAGTGGGTGATGATGGACCTGCCTAGCCGTCGATTTCTTTCGGTAAATTCACAGCCGCAGGAAGGTGATGAAAATTGCTTGACAGTAGCACCAACACAGCTTTCCGATGAATTGGAGATTCTTGTTGCAGAAAACTCAGCAGGTTGCAGACTTTTCAGCTATGCAGAAATCAGTAGCGCAACTTGTCACTTCTCTGCAGAAAATCTTATCGGTGAGGGAGGGTGTAGCAGCGTATACAGAGGATGTCTCGAAGGAGGTGAATCAGTGGCGGTCAAGGTTCTGAAATCGTACAAGGAAGCTTGGGATGACTTTTTCTTGGAAACCAAGTTTGCGTCTTCAATTCAGCACAAACACATCGCTTCTCTACTTGGTGCATGTGTGGAAGATGGCAACCTTATTTTGGTATATGACCTCTTTCCCAGAGGGAGCTTGGAAGGAAACTTGTACGATTGCAGTGATGGATGTATACTCCCATGGGAAGTGAGATTCAATGTGGCTGTTGCGGTTGCAGAGGCTCTAACTTACTTGCACAATGAATGCACTCAACCGATCATTCATCGCGATGTTAAATCCTCAAACATTCTTCTCTCCGACGAGCTTCAGCCGCAGTTATCTGATTTCGGGCTTGCTACATGGGGACCGACGGATTCTGGTTATGTGATAAGTAGTGATGTGGTGGGGACTTTTGGGTACATTGCTCCGGAATATTTCATGCATGGGATGGTGAGTGACAAGATTGATGTTTATGCCTTTGGTGTGATTCTCCTTGAACTATTATCCGGTCGAAAGCCCGTAGATGAGGCTTCGAAAGGACAAGAGAGTTTGGTCAAATGGGCAAGAAATTTGTTAGACGTTATGGATCTTAAATCATTGCTGGATCCAAAGTTAAATGGGGACTACGATGTTGCCCAAATGCGCAGAATGGTAATGGCAGCAGGGCTTTGCATAAACCAGTCACCTCGTCTTCGACCGAAAGCGAGCCAGGTACTGAAGCTACTAACGGGAGAGACGGACGCAAATGAGTGTTTTAATCTTCATGCTGTCAAGTCGAGAGAGATGTGTTGTCGAGATGAAGACGACGACCTATTCCCGGAAGTCGGGTGGCGTTCGGTTTCTGCAATGTCCGATACAAATGATGGTAGCATCAGCAGATCGAGTTCAACAAACACAGCATCTAGTGCAGAGAAACCACACCGATACAAGTTAAAGGACTACTTGACTATACCTGACCATTATTCTTTGAGTGAAATTTCTTTCATAAACATGTAA

Protein Analysis

488

Amino Acids

54.08

Weight (kDa)

4.76

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 131 - 395 1.4e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 132 - 336 4.1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1112
Acc36I ACCTGC 2 cut(s) 222, 326
AccB7I CCANNNNNTGG 1 cut(s) 17
AccBSI CCGCTC 1 cut(s) 109
AccI GTMKAC 2 cut(s) 429, 661
AccII CGCG 1 cut(s) 756
AccIII TCCGGA 1 cut(s) 895
AciI CCGC 7 cut(s) 107, 115, 134, 251, 464, 698, 800
AclWI GGATC 3 cut(s) 1062, 1067, 1080
AcoI YGGCCR 2 cut(s) 23, 104
AcsI RAATTY 4 cut(s) 164, 241, 1036, 1443
AcuI CTGAAG 2 cut(s) 779, 1205
AfaI GTAC 6 cut(s) 148, 195, 485, 641, 887, 1182
AfiI CCNNNNNNNGG 5 cut(s) 17, 257, 595, 1285, 1292
AflIII ACRYGT 2 cut(s) 54, 1458
AgsI TTSAA 4 cut(s) 534, 685, 965, 1356
AjnI CCWGG 2 cut(s) 173, 1176
AjuI GAANNNNNNNTTGG 3 cut(s) 32, 280, 312
Alw26I GTCTC 2 cut(s) 446, 1196
AlwI GGATC 3 cut(s) 1062, 1067, 1080
AlwNI CAGNNNCTG 1 cut(s) 1183
Aor13HI TCCGGA 1 cut(s) 895
AoxI GGCC 3 cut(s) 23, 95, 104
ApeKI GCWGC 4 cut(s) 122, 125, 423, 1127
ApoI RAATTY 4 cut(s) 164, 241, 1036, 1443
AspLEI GCGC 2 cut(s) 374, 1113
AspS9I GGNCC 2 cut(s) 211, 833
AsuC2I CCSGG 2 cut(s) 99, 1286
AsuHPI GGTGA 7 cut(s) 75, 214, 272, 419, 464, 931, 1143
AsuII TTCGAA 1 cut(s) 1001
AvaII GGWCC 2 cut(s) 211, 833
BalI TGGCCA 1 cut(s) 25
BamHI GGATCC 1 cut(s) 1072
BbsI GAAGAC 3 cut(s) 522, 1151, 1275
BbvCI CCTCAGC 1 cut(s) 130
BbvI GCAGC 4 cut(s) 109, 112, 435, 1139
BccI CCATC 5 cut(s) 202, 575, 647, 910, 1325
BceAI ACGGC 1 cut(s) 207
BciT130I CCWGG 2 cut(s) 175, 1178
BcnI CCSGG 2 cut(s) 99, 1286
BcoDI GTCTC 2 cut(s) 446, 1196
BfaI CTAG 2 cut(s) 219, 1371
BfmI CTRYAG 1 cut(s) 390
BfuAI ACCTGC 2 cut(s) 222, 326
BglI GCCNNNNNGGC 1 cut(s) 103
BisI GCNGC 7 cut(s) 107, 123, 126, 251, 424, 800, 1128
BlsI GCNGC 7 cut(s) 108, 124, 127, 252, 425, 801, 1129
BmcAI AGTACT 1 cut(s) 148
Bme1390I CCNGG 4 cut(s) 99, 175, 1178, 1286
Bme18I GGWCC 2 cut(s) 211, 833
BmgT120I GGNCC 2 cut(s) 211, 833
BmiI GGNNCC 2 cut(s) 834, 1074
BmrFI CCNGG 4 cut(s) 99, 175, 1178, 1286
BmsI GCATC 2 cut(s) 1347, 1376
BpiI GAAGAC 3 cut(s) 522, 1151, 1275
BplI GAGNNNNNCTC 4 cut(s) 136, 168, 426, 458
Bpu10I CCTNAGC 1 cut(s) 130
Bpu14I TTCGAA 1 cut(s) 1001
BpuMI CCSGG 2 cut(s) 99, 1286
BsaJI CCNNGG 3 cut(s) 174, 189, 668
BsaWI WCCGGW 2 cut(s) 895, 974
Bsc4I CCNNNNNNNGG 5 cut(s) 17, 257, 595, 1285, 1292
Bse1I ACTGG 1 cut(s) 1147
Bse3DI GCAATG 3 cut(s) 888, 1064, 1320
BseAI TCCGGA 1 cut(s) 895
BseBI CCWGG 2 cut(s) 175, 1178
BseDI CCNNGG 3 cut(s) 174, 189, 668
BseGI GGATG 5 cut(s) 79, 443, 505, 662, 921
BseLI CCNNNNNNNGG 5 cut(s) 17, 257, 595, 1285, 1292
BseMI GCAATG 3 cut(s) 888, 1064, 1320
BseMII CTCAG 2 cut(s) 144, 345
BseNI ACTGG 1 cut(s) 1147
BseXI GCAGC 4 cut(s) 109, 112, 435, 1139
BsgI GTGCAG 1 cut(s) 1395
Bsh1236I CGCG 1 cut(s) 756
Bsh1285I CGRYCG 2 cut(s) 979, 1166
BshFI GGCC 3 cut(s) 25, 97, 106
BsiEI CGRYCG 2 cut(s) 979, 1166
BsiSI CCGG 5 cut(s) 34, 98, 896, 975, 1286
BslFI GGGAC 3 cut(s) 846, 889, 1103
BslI CCNNNNNNNGG 5 cut(s) 17, 257, 595, 1285, 1292
BsmAI GTCTC 2 cut(s) 446, 1196
BsmBI CGTCTC 1 cut(s) 1196
BsmFI GGGAC 3 cut(s) 846, 889, 1103
BsmI GAATGC 1 cut(s) 737
BsnI GGCC 3 cut(s) 25, 97, 106
Bsp119I TTCGAA 1 cut(s) 1001
Bsp13I TCCGGA 1 cut(s) 895
Bsp143I GATC 4 cut(s) 744, 1054, 1072, 1346
Bsp19I CCATGG 1 cut(s) 668
Bsp68I TCGCGA 1 cut(s) 756
BspACI CCGC 7 cut(s) 107, 115, 134, 251, 464, 698, 800
BspANI GGCC 3 cut(s) 25, 97, 106
BspCNI CTCAG 2 cut(s) 143, 344
BspEI TCCGGA 1 cut(s) 895
BspFNI CGCG 1 cut(s) 756
BspLI GGNNCC 2 cut(s) 834, 1074
BspMAI CTGCAG 1 cut(s) 394
BspMI ACCTGC 2 cut(s) 222, 326
BspPI GGATC 3 cut(s) 1062, 1067, 1080
BspT104I TTCGAA 1 cut(s) 1001
BsrBI CCGCTC 1 cut(s) 109
BsrDI GCAATG 3 cut(s) 888, 1064, 1320
BsrI ACTGG 1 cut(s) 1147
BssECI CCNNGG 3 cut(s) 174, 189, 668
BssMI GATC 4 cut(s) 744, 1054, 1072, 1346
BssNAI GTATAC 2 cut(s) 430, 662
BssT1I CCWWGG 1 cut(s) 668
Bst1107I GTATAC 2 cut(s) 430, 662
Bst2UI CCWGG 2 cut(s) 175, 1178
Bst4CI ACNGT 2 cut(s) 198, 280
BstAPI GCANNNNNTGC 1 cut(s) 1373
BstBI TTCGAA 1 cut(s) 1001
BstC8I GCNNGC 2 cut(s) 822, 1174
BstDEI CTNAG 2 cut(s) 130, 331
BstDSI CCRYGG 2 cut(s) 189, 668
BstF5I GGATG 5 cut(s) 79, 443, 505, 662, 921
BstFNI CGCG 1 cut(s) 756
BstHHI GCGC 2 cut(s) 374, 1113
BstKTI GATC 4 cut(s) 747, 1057, 1075, 1349
BstMAI GTCTC 2 cut(s) 446, 1196
BstMBI GATC 4 cut(s) 744, 1054, 1072, 1346
BstMCI CGRYCG 2 cut(s) 979, 1166
BstMWI GCNNNNNNNGC 5 cut(s) 103, 112, 131, 799, 1373
BstNI CCWGG 2 cut(s) 175, 1178
BstNSI RCATGY 3 cut(s) 58, 573, 1462
BstSCI CCNGG 4 cut(s) 97, 173, 1176, 1284
BstSFI CTRYAG 1 cut(s) 390
BstUI CGCG 1 cut(s) 756
BstV1I GCAGC 4 cut(s) 109, 112, 435, 1139
BstV2I GAAGAC 3 cut(s) 522, 1151, 1275
BstX2I RGATCY 2 cut(s) 1054, 1072
BstYI RGATCY 2 cut(s) 1054, 1072
BstZ17I GTATAC 2 cut(s) 430, 662
BsuRI GGCC 3 cut(s) 25, 97, 106
BtgI CCRYGG 2 cut(s) 189, 668
BtgZI GCGATG 3 cut(s) 535, 737, 771
BtsCI GGATG 5 cut(s) 79, 443, 505, 662, 921
BtsI GCAGTG 1 cut(s) 655
BtsIMutI CAGTG 3 cut(s) 203, 465, 655
BtuMI TCGCGA 1 cut(s) 756
BveI ACCTGC 2 cut(s) 222, 326
Cac8I GCNNGC 2 cut(s) 822, 1174
CaiI CAGNNNCTG 1 cut(s) 1183
CfoI GCGC 2 cut(s) 374, 1113
Cfr13I GGNCC 2 cut(s) 211, 833
CseI GACGC 2 cut(s) 516, 1217
Csp6I GTAC 6 cut(s) 147, 194, 484, 640, 886, 1181
CviAII CATG 8 cut(s) 55, 570, 669, 828, 907, 911, 1232, 1459
CviQI GTAC 6 cut(s) 147, 194, 484, 640, 886, 1181
DdeI CTNAG 2 cut(s) 130, 331
DpnI GATC 4 cut(s) 746, 1056, 1074, 1348
DpnII GATC 4 cut(s) 744, 1054, 1072, 1346
DraI TTTAAA 1 cut(s) 169
EaeI YGGCCR 2 cut(s) 23, 104
Eco130I CCWWGG 1 cut(s) 668
Eco47I GGWCC 2 cut(s) 211, 833
Eco57I CTGAAG 2 cut(s) 779, 1205
EcoRII CCWGG 2 cut(s) 173, 1176
EcoT14I CCWWGG 1 cut(s) 668
EcoT22I ATGCAT 1 cut(s) 912
ErhI CCWWGG 1 cut(s) 668
Esp3I CGTCTC 1 cut(s) 1196
FaeI CATG 8 cut(s) 58, 573, 672, 831, 910, 914, 1235, 1462
FalI AAGNNNNNCTT 2 cut(s) 1394, 1426
FaqI GGGAC 3 cut(s) 846, 889, 1103
FatI CATG 8 cut(s) 54, 569, 668, 827, 906, 910, 1231, 1458
FblI GTMKAC 2 cut(s) 429, 661
Fnu4HI GCNGC 7 cut(s) 107, 123, 126, 251, 424, 800, 1128
FokI GGATG 5 cut(s) 86, 450, 512, 669, 928
Fsp4HI GCNGC 7 cut(s) 107, 123, 126, 251, 424, 800, 1128
FspBI CTAG 2 cut(s) 219, 1371
FspI TGCGCA 1 cut(s) 1112
GlaI GCGC 2 cut(s) 373, 1112
GluI GCNGC 7 cut(s) 107, 123, 126, 251, 424, 800, 1128
HaeIII GGCC 3 cut(s) 25, 97, 106
HapII CCGG 5 cut(s) 34, 98, 896, 975, 1286
HgaI GACGC 2 cut(s) 516, 1217
HhaI GCGC 2 cut(s) 374, 1113
Hin1II CATG 8 cut(s) 58, 573, 672, 831, 910, 914, 1235, 1462
Hin6I GCGC 2 cut(s) 372, 1111
HinP1I GCGC 2 cut(s) 372, 1111
HindIII AAGCTT 1 cut(s) 492
HinfI GANTC 6 cut(s) 80, 313, 455, 681, 842, 955
HpaII CCGG 5 cut(s) 34, 98, 896, 975, 1286
HphI GGTGA 7 cut(s) 75, 214, 272, 419, 464, 931, 1143
Hpy166II GTNNAC 2 cut(s) 430, 662
Hpy188I TCNGA 6 cut(s) 64, 301, 477, 787, 811, 1321
Hpy188III TCNNGA 5 cut(s) 443, 755, 896, 1245, 1262
Hpy8I GTNNAC 2 cut(s) 430, 662
Hpy99I CGWCG 4 cut(s) 228, 791, 841, 1277
HpyAV CCTTC 3 cut(s) 251, 440, 623
HpyCH4III ACNGT 2 cut(s) 198, 280
HpyCH4IV ACGT 1 cut(s) 1047
HpyF10VI GCNNNNNNNGC 5 cut(s) 103, 112, 131, 799, 1373
HpyF3I CTNAG 2 cut(s) 130, 331
HpySE526I ACGT 1 cut(s) 1047
Hsp92II CATG 8 cut(s) 58, 573, 672, 831, 910, 914, 1235, 1462
HspAI GCGC 2 cut(s) 372, 1111
Kpn2I TCCGGA 1 cut(s) 895
Kzo9I GATC 4 cut(s) 744, 1054, 1072, 1346
LmnI GCTCC 2 cut(s) 621, 898
Lsp1109I GCAGC 4 cut(s) 109, 112, 435, 1139
LweI GCATC 2 cut(s) 1347, 1376
MaeI CTAG 2 cut(s) 219, 1371
MaeII ACGT 1 cut(s) 1047
MaeIII GTNAC 3 cut(s) 380, 923, 1149
MalI GATC 4 cut(s) 746, 1056, 1074, 1348
MbiI CCGCTC 1 cut(s) 109
MboI GATC 4 cut(s) 744, 1054, 1072, 1346
MboII GAAGA 6 cut(s) 522, 590, 770, 1151, 1220, 1280
MflI RGATCY 2 cut(s) 1054, 1072
MlsI TGGCCA 1 cut(s) 25
MluCI AATT 7 cut(s) 164, 241, 268, 305, 534, 1036, 1443
MluNI TGGCCA 1 cut(s) 25
MmeI TCCRAC 1 cut(s) 810
Mox20I TGGCCA 1 cut(s) 25
Mph1103I ATGCAT 1 cut(s) 912
MroI TCCGGA 1 cut(s) 895
MscI TGGCCA 1 cut(s) 25
MseI TTAA 6 cut(s) 168, 762, 1059, 1082, 1224, 1400
MslI CAYNNNNRTG 2 cut(s) 756, 1457
Msp20I TGGCCA 1 cut(s) 25
MspA1I CMGCKG 1 cut(s) 134
MspI CCGG 5 cut(s) 34, 98, 896, 975, 1286
MspR9I CCNGG 4 cut(s) 99, 175, 1178, 1286
Mva1269I GAATGC 1 cut(s) 737
MvaI CCWGG 2 cut(s) 175, 1178
MvnI CGCG 1 cut(s) 756
MwoI GCNNNNNNNGC 5 cut(s) 103, 112, 131, 799, 1373
NciI CCSGG 2 cut(s) 99, 1286
NcoI CCATGG 1 cut(s) 668
NdeII GATC 4 cut(s) 744, 1054, 1072, 1346
NlaIII CATG 8 cut(s) 58, 573, 672, 831, 910, 914, 1235, 1462
NlaIV GGNNCC 2 cut(s) 834, 1074
NmuCI GTSAC 3 cut(s) 380, 923, 1149
NruI TCGCGA 1 cut(s) 756
NsbI TGCGCA 1 cut(s) 1112
NsiI ATGCAT 1 cut(s) 912
NspI RCATGY 3 cut(s) 58, 573, 1462
NspV TTCGAA 1 cut(s) 1001
PciI ACATGT 2 cut(s) 54, 1458
PctI GAATGC 1 cut(s) 737
PfeI GAWTC 6 cut(s) 80, 313, 455, 681, 842, 955
PflMI CCANNNNNTGG 1 cut(s) 17
PfoI TCCNGGA 1 cut(s) 1284
PkrI GCNGC 7 cut(s) 108, 124, 127, 252, 425, 801, 1129
PscI ACATGT 2 cut(s) 54, 1458
Psp6I CCWGG 2 cut(s) 173, 1176
PspGI CCWGG 2 cut(s) 173, 1176
PspN4I GGNNCC 2 cut(s) 834, 1074
PspPI GGNCC 2 cut(s) 211, 833
PstI CTGCAG 1 cut(s) 394
PstNI CAGNNNCTG 1 cut(s) 1183
PsuI RGATCY 2 cut(s) 1054, 1072
RruI TCGCGA 1 cut(s) 756
RsaI GTAC 6 cut(s) 148, 195, 485, 641, 887, 1182
RsaNI GTAC 6 cut(s) 147, 194, 484, 640, 886, 1181
RseI CAYNNNNRTG 2 cut(s) 756, 1457
SaqAI TTAA 6 cut(s) 168, 762, 1059, 1082, 1224, 1400
SatI GCNGC 7 cut(s) 107, 123, 126, 251, 424, 800, 1128
Sau3AI GATC 4 cut(s) 744, 1054, 1072, 1346
Sau96I GGNCC 2 cut(s) 211, 833
ScaI AGTACT 1 cut(s) 148
ScrFI CCNGG 4 cut(s) 99, 175, 1178, 1286
SfaNI GCATC 2 cut(s) 1347, 1376
SfcI CTRYAG 1 cut(s) 390
SfiI GGCCNNNNNGGCC 1 cut(s) 103
SfuI TTCGAA 1 cut(s) 1001
SinI GGWCC 2 cut(s) 211, 833
SmiI ATTTAAAT 1 cut(s) 169
SmiMI CAYNNNNRTG 2 cut(s) 756, 1457
Sse9I AATT 7 cut(s) 164, 241, 268, 305, 534, 1036, 1443
SsiI CCGC 7 cut(s) 107, 115, 134, 251, 464, 698, 800
SspI AATATT 1 cut(s) 902
SspMI CTAG 2 cut(s) 219, 1371
StyD4I CCNGG 4 cut(s) 97, 173, 1176, 1284
StyI CCWWGG 1 cut(s) 668
SwaI ATTTAAAT 1 cut(s) 169
TaaI ACNGT 2 cut(s) 198, 280
TaiI ACGT 1 cut(s) 1050
TaqII GACCGA 2 cut(s) 850, 1180
TasI AATT 7 cut(s) 164, 241, 268, 305, 534, 1036, 1443
TatI WGTACW 1 cut(s) 146
TauI GCSGC 3 cut(s) 109, 253, 802
TfiI GAWTC 6 cut(s) 80, 313, 455, 681, 842, 955
Tru1I TTAA 6 cut(s) 168, 762, 1059, 1082, 1224, 1400
Tru9I TTAA 6 cut(s) 168, 762, 1059, 1082, 1224, 1400
TscAI CASTG 3 cut(s) 203, 465, 655
TseFI GTSAC 3 cut(s) 380, 923, 1149
TseI GCWGC 4 cut(s) 122, 125, 423, 1127
Tsp45I GTSAC 3 cut(s) 380, 923, 1149
TspDTI ATGAA 9 cut(s) 93, 279, 318, 740, 744, 895, 1220, 1281, 1441
TspGWI ACGGA 3 cut(s) 178, 854, 1220
TspRI CASTG 3 cut(s) 203, 465, 655
Van91I CCANNNNNTGG 1 cut(s) 17
VpaK11BI GGWCC 2 cut(s) 211, 833
XapI RAATTY 4 cut(s) 164, 241, 1036, 1443
XceI RCATGY 3 cut(s) 58, 573, 1462
XcmI CCANNNNNNNNNTGG 2 cut(s) 18, 622
XmiI GTMKAC 2 cut(s) 429, 661
XspI CTAG 2 cut(s) 219, 1371
ZrmI AGTACT 1 cut(s) 148
Zsp2I ATGCAT 1 cut(s) 912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.