Rw6G037640

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
61918594 .. 61920716
2123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G037640.1

Sequence Viewer

Length: 1446 bp
ATGAGGACCAGGAAGCGGAATTCATCGGAATCTGATAGAGGTTGGTTAAGTTGCGATATGTCAGAATCAACTTTTGGCTGGCCCCTTCAGAAAGTAACTGTTCCTATGGAGACTCAGCTGGGAGCTTGTGAAAAATCAGATGATGATTCGAAGAGTTGGGAGGTTGAAGAAGATGAATATGCATCACCTTTATCAAGGCCTGGTTGGCCTCTCCTTCGTGTAGCAACCTCCGAAACCATGAGTACTCCTGGTAGAAAGTTTGAAGCAAAAGATGTGTCTGTAGTCGAATGGGTGATGGGACTTCCTAGTCGAACAACCTCAGTCAATCTGCAGCTTGCTAATGAATTGAAGTTCCTCATTAAGAAAGACTCACAAGGTTGCAGGATGTTTAGCTACGCCGAAATAAGGACTGCAACTTCTCAATTCTCCTCAGATAATCTTATCGGCGAGGGAGGGTGCAGCAGTGTGTACAGAGGAGTTCTCCGATGTGGGAAATCCGTGGCGGTGAAGATTTTGAAAGTATACAAGGAAGCTTGGGATGATTTTTGCTTGGAAGCCAAATTTGTGTCTTCAATTAAGCATAAGCATATAGTATCTCTCATTGGCGTGTGTGAGGAAGATGAGAATCTTGTTCTAGTATATGAGCTCTTTCCTAGGGGGAGTTTGGAGGAAAACTTGCACGATTGTAATGATGGTTCTGTACTGCCATGGGAAGTGAGATTCAACGCGGCAGTTGCAGTTGCTGAGGCTCTAAATTATCTACACAATGAGTGCCCTCAGCCGATTATTCATAGAGACGTAAAATCTGCAAACATTCTTCTCTCAAGTGATCATCAGCCACAGTTATCAGATTTTGGGCTTGCTATATGGGGATCAGTGGATTCTAGTTATGTAATAAGTAATGATGTGGTGGGAACTTTTGGATACATGGCTCCAGAGTATTTCATGCAAGGGAGGGTCAGTGACAAGGTTGATGTGTACGCCTTTGGTGTAGTTCTCCTTGAACTACTATCAGGAAGAAAGCCAGTTGATGTTGAGGCTCCAAAAGGACAAGAGAGCTTGATCAAGTGGGCAAGAAAGCTATTAAAAATTGGAGATCTTAAAGCATTGCTGGATCCCAAGCTAAGAGCGGACTATGATATTGTCCAAATTGGTAGAATGTCTATGGCAGCAAGTCTTTGCACAAACCAGTCAGCTCAAATTCGTCCAAATATGAGGCAGGTACTGAAAATCTTAGGAGGGGAGACAGATGCCAATGAGTCAGACTATTATGAAGCCGAAGATGATAGTTTACTGGAAGCTGATTGGAATTCAGTTTCCGAAGTGTCCGAGACAAAGGATGATAGCATTTCACCATCAAGTTCTACTGATACAGCATCCAGTGCAGGAAAAACTCCCCGCCTTAAATTGAAGGACTACTTAACTATACATGATCATCAATTTTGA

Protein Analysis

481

Amino Acids

53.58

Weight (kDa)

4.99

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 144 - 370 2.9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 145 - 409 5e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 1210
AccBSI CCGCTC 1 cut(s) 1130
AccI GTMKAC 1 cut(s) 522
AccII CGCG 1 cut(s) 728
AciI CCGC 5 cut(s) 16, 503, 728, 1130, 1399
AclWI GGATC 3 cut(s) 880, 1109, 1122
AcsI RAATTY 4 cut(s) 19, 560, 1200, 1309
AcuI CTGAAG 1 cut(s) 71
AfaI GTAC 5 cut(s) 244, 470, 702, 980, 1224
AfiI CCNNNNNNNGG 2 cut(s) 15, 405
AgsI TTSAA 8 cut(s) 167, 263, 349, 517, 573, 724, 1004, 1411
AjnI CCWGG 3 cut(s) 8, 199, 247
AjuI GAANNNNNNNTTGG 2 cut(s) 57, 89
Alw21I GWGCWC 1 cut(s) 648
Alw26I GTCTC 4 cut(s) 104, 789, 1238, 1325
AlwI GGATC 3 cut(s) 880, 1109, 1122
AlwNI CAGNNNCTG 2 cut(s) 743, 1225
AoxI GGCC 3 cut(s) 80, 197, 206
ApeKI GCWGC 3 cut(s) 331, 459, 1169
ApoI RAATTY 4 cut(s) 19, 560, 1200, 1309
ArsI GACNNNNNNTTYG 2 cut(s) 260, 292
AspA2I CCTAGG 1 cut(s) 653
AspS9I GGNCC 2 cut(s) 6, 81
AsuHPI GGTGA 4 cut(s) 177, 304, 517, 1344
AsuII TTCGAA 1 cut(s) 149
AvaII GGWCC 1 cut(s) 6
AvrII CCTAGG 1 cut(s) 653
BaeGI GKGCMC 1 cut(s) 776
BamHI GGATCC 1 cut(s) 1114
BanII GRGCYC 1 cut(s) 648
BbsI GAAGAC 1 cut(s) 561
Bbv12I GWGCWC 1 cut(s) 648
BbvCI CCTCAGC 2 cut(s) 744, 777
BbvI GCAGC 3 cut(s) 343, 471, 1181
BccI CCATC 3 cut(s) 289, 686, 1363
BciT130I CCWGG 3 cut(s) 10, 201, 249
BciVI GTATCC 1 cut(s) 917
BclI TGATCA 3 cut(s) 829, 1062, 1432
BcoDI GTCTC 4 cut(s) 104, 789, 1238, 1325
BfaI CTAG 4 cut(s) 306, 635, 654, 885
BfmI CTRYAG 2 cut(s) 279, 329
BfuAI ACCTGC 1 cut(s) 1210
BfuI GTATCC 1 cut(s) 917
BglI GCCNNNNNGGC 1 cut(s) 205
BglII AGATCT 1 cut(s) 1096
BisI GCNGC 4 cut(s) 332, 460, 729, 1170
BlnI CCTAGG 1 cut(s) 653
BlsI GCNGC 4 cut(s) 333, 461, 730, 1171
BmcAI AGTACT 1 cut(s) 244
Bme1390I CCNGG 3 cut(s) 10, 201, 249
Bme18I GGWCC 1 cut(s) 6
BmgT120I GGNCC 2 cut(s) 6, 81
BmiI GGNNCC 4 cut(s) 83, 933, 1041, 1116
BmrFI CCNGG 3 cut(s) 10, 201, 249
BmsI GCATC 3 cut(s) 191, 1240, 1385
BpiI GAAGAC 1 cut(s) 561
BplI GAGNNNNNCTC 2 cut(s) 465, 497
BpmI CTGGAG 1 cut(s) 918
Bpu10I CCTNAGC 2 cut(s) 744, 777
Bpu14I TTCGAA 1 cut(s) 149
BpuEI CTTGAG 1 cut(s) 808
BsaBI GATNNNNATC 1 cut(s) 624
BsaJI CCNNGG 3 cut(s) 498, 653, 707
BsaXI ACNNNNNCTCC 2 cut(s) 946, 976
Bsc4I CCNNNNNNNGG 2 cut(s) 15, 405
Bse1I ACTGG 4 cut(s) 1025, 1189, 1299, 1380
Bse3DI GCAATG 1 cut(s) 1106
Bse8I GATNNNNATC 1 cut(s) 624
BseBI CCWGG 3 cut(s) 10, 201, 249
BseDI CCNNGG 3 cut(s) 498, 653, 707
BseGI GGATG 4 cut(s) 390, 544, 1345, 1376
BseJI GATNNNNATC 1 cut(s) 624
BseLI CCNNNNNNNGG 2 cut(s) 15, 405
BseMI GCAATG 1 cut(s) 1106
BseMII CTCAG 5 cut(s) 128, 333, 444, 735, 791
BseNI ACTGG 4 cut(s) 1025, 1189, 1299, 1380
BseRI GAGGAG 2 cut(s) 418, 489
BseSI GKGCMC 1 cut(s) 776
BseXI GCAGC 3 cut(s) 343, 471, 1181
BseYI CCCAGC 1 cut(s) 118
BsgI GTGCAG 2 cut(s) 478, 1404
Bsh1236I CGCG 1 cut(s) 728
BshFI GGCC 3 cut(s) 82, 199, 208
BsiHKAI GWGCWC 1 cut(s) 648
BslFI GGGAC 1 cut(s) 312
BslI CCNNNNNNNGG 2 cut(s) 15, 405
BsmAI GTCTC 4 cut(s) 104, 789, 1238, 1325
BsmBI CGTCTC 1 cut(s) 789
BsmFI GGGAC 1 cut(s) 312
BsnI GGCC 3 cut(s) 82, 199, 208
Bsp119I TTCGAA 1 cut(s) 149
Bsp1286I GDGCHC 2 cut(s) 648, 776
Bsp1407I TGTACA 1 cut(s) 468
Bsp143I GATC 6 cut(s) 829, 872, 1062, 1096, 1114, 1432
Bsp19I CCATGG 1 cut(s) 707
BspACI CCGC 5 cut(s) 16, 503, 728, 1130, 1399
BspANI GGCC 3 cut(s) 82, 199, 208
BspCNI CTCAG 5 cut(s) 127, 332, 443, 736, 790
BspFNI CGCG 1 cut(s) 728
BspLI GGNNCC 4 cut(s) 83, 933, 1041, 1116
BspMAI CTGCAG 1 cut(s) 333
BspMI ACCTGC 1 cut(s) 1210
BspPI GGATC 3 cut(s) 880, 1109, 1122
BspT104I TTCGAA 1 cut(s) 149
BsrBI CCGCTC 1 cut(s) 1130
BsrDI GCAATG 1 cut(s) 1106
BsrGI TGTACA 1 cut(s) 468
BsrI ACTGG 4 cut(s) 1025, 1189, 1299, 1380
BssECI CCNNGG 3 cut(s) 498, 653, 707
BssMI GATC 6 cut(s) 829, 872, 1062, 1096, 1114, 1432
BssNAI GTATAC 1 cut(s) 523
BssT1I CCWWGG 2 cut(s) 653, 707
Bst1107I GTATAC 1 cut(s) 523
Bst2UI CCWGG 3 cut(s) 10, 201, 249
Bst4CI ACNGT 2 cut(s) 100, 843
Bst6I CTCTTC 1 cut(s) 146
BstAPI GCANNNNNTGC 1 cut(s) 1382
BstAUI TGTACA 1 cut(s) 468
BstBI TTCGAA 1 cut(s) 149
BstC8I GCNNGC 3 cut(s) 80, 336, 861
BstDEI CTNAG 7 cut(s) 114, 319, 430, 744, 777, 1124, 1234
BstDSI CCRYGG 2 cut(s) 498, 707
BstF5I GGATG 4 cut(s) 390, 544, 1345, 1376
BstFNI CGCG 1 cut(s) 728
BstKTI GATC 6 cut(s) 832, 875, 1065, 1099, 1117, 1435
BstMAI GTCTC 4 cut(s) 104, 789, 1238, 1325
BstMBI GATC 6 cut(s) 829, 872, 1062, 1096, 1114, 1432
BstMWI GCNNNNNNNGC 3 cut(s) 205, 734, 1382
BstNI CCWGG 3 cut(s) 10, 201, 249
BstSCI CCNGG 3 cut(s) 8, 199, 247
BstSFI CTRYAG 2 cut(s) 279, 329
BstSLI GKGCMC 1 cut(s) 776
BstUI CGCG 1 cut(s) 728
BstV1I GCAGC 3 cut(s) 343, 471, 1181
BstV2I GAAGAC 1 cut(s) 561
BstX2I RGATCY 2 cut(s) 1096, 1114
BstYI RGATCY 2 cut(s) 1096, 1114
BstZ17I GTATAC 1 cut(s) 523
BsuI GTATCC 1 cut(s) 917
BsuRI GGCC 3 cut(s) 82, 199, 208
BtgI CCRYGG 2 cut(s) 498, 707
BtsCI GGATG 4 cut(s) 390, 544, 1345, 1376
BtsI GCAGTG 1 cut(s) 469
BtsIMutI CAGTG 4 cut(s) 469, 882, 967, 1387
BveI ACCTGC 1 cut(s) 1210
Cac8I GCNNGC 3 cut(s) 80, 336, 861
CaiI CAGNNNCTG 2 cut(s) 743, 1225
Cfr13I GGNCC 2 cut(s) 6, 81
Csp6I GTAC 5 cut(s) 243, 469, 701, 979, 1223
CviAII CATG 5 cut(s) 238, 708, 928, 946, 1430
CviQI GTAC 5 cut(s) 243, 469, 701, 979, 1223
DdeI CTNAG 7 cut(s) 114, 319, 430, 744, 777, 1124, 1234
DpnI GATC 6 cut(s) 831, 874, 1064, 1098, 1116, 1434
DpnII GATC 6 cut(s) 829, 872, 1062, 1096, 1114, 1432
DrdI GACNNNNNNGTC 1 cut(s) 306
DseDI GACNNNNNNGTC 1 cut(s) 306
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
Ecl136II GAGCTC 1 cut(s) 646
Eco130I CCWWGG 2 cut(s) 653, 707
Eco147I AGGCCT 1 cut(s) 199
Eco24I GRGCYC 1 cut(s) 648
Eco47I GGWCC 1 cut(s) 6
Eco53kI GAGCTC 1 cut(s) 646
Eco57I CTGAAG 1 cut(s) 71
EcoICRI GAGCTC 1 cut(s) 646
EcoRI GAATTC 2 cut(s) 19, 1309
EcoRII CCWGG 3 cut(s) 8, 199, 247
EcoT14I CCWWGG 2 cut(s) 653, 707
EcoT22I ATGCAT 1 cut(s) 184
EcoT38I GRGCYC 1 cut(s) 648
ErhI CCWWGG 2 cut(s) 653, 707
Esp3I CGTCTC 1 cut(s) 789
FaeI CATG 5 cut(s) 241, 711, 931, 949, 1433
FalI AAGNNNNNCTT 2 cut(s) 1403, 1435
FaqI GGGAC 1 cut(s) 312
FatI CATG 5 cut(s) 237, 707, 927, 945, 1429
FauI CCCGC 1 cut(s) 1406
FbaI TGATCA 3 cut(s) 829, 1062, 1432
FblI GTMKAC 1 cut(s) 522
Fnu4HI GCNGC 4 cut(s) 332, 460, 729, 1170
FokI GGATG 4 cut(s) 397, 551, 1352, 1363
FriOI GRGCYC 1 cut(s) 648
Fsp4HI GCNGC 4 cut(s) 332, 460, 729, 1170
FspBI CTAG 4 cut(s) 306, 635, 654, 885
GluI GCNGC 4 cut(s) 332, 460, 729, 1170
GsaI CCCAGC 1 cut(s) 122
GsuI CTGGAG 1 cut(s) 918
HaeIII GGCC 3 cut(s) 82, 199, 208
Hin1II CATG 5 cut(s) 241, 711, 931, 949, 1433
HindIII AAGCTT 1 cut(s) 531
HinfI GANTC 9 cut(s) 29, 65, 112, 146, 368, 625, 720, 881, 1259
HphI GGTGA 4 cut(s) 177, 304, 517, 1344
Hpy166II GTNNAC 4 cut(s) 469, 523, 979, 1292
Hpy188III TCNNGA 2 cut(s) 935, 1014
Hpy8I GTNNAC 4 cut(s) 469, 523, 979, 1292
HpyAV CCTTC 3 cut(s) 95, 224, 1405
HpyCH4III ACNGT 2 cut(s) 100, 843
HpyCH4IV ACGT 1 cut(s) 798
HpyF10VI GCNNNNNNNGC 3 cut(s) 205, 734, 1382
HpyF3I CTNAG 7 cut(s) 114, 319, 430, 744, 777, 1124, 1234
HpySE526I ACGT 1 cut(s) 798
Hsp92II CATG 5 cut(s) 241, 711, 931, 949, 1433
Ksp22I TGATCA 3 cut(s) 829, 1062, 1432
Kzo9I GATC 6 cut(s) 829, 872, 1062, 1096, 1114, 1432
LmnI GCTCC 3 cut(s) 122, 937, 1045
Lsp1109I GCAGC 3 cut(s) 343, 471, 1181
LweI GCATC 3 cut(s) 191, 1240, 1385
MaeI CTAG 4 cut(s) 306, 635, 654, 885
MaeII ACGT 1 cut(s) 798
MaeIII GTNAC 2 cut(s) 94, 962
MalI GATC 6 cut(s) 831, 874, 1064, 1098, 1116, 1434
MbiI CCGCTC 1 cut(s) 1130
MboI GATC 6 cut(s) 829, 872, 1062, 1096, 1114, 1432
MboII GAAGA 9 cut(s) 163, 179, 182, 520, 561, 629, 809, 1029, 1292
MflI RGATCY 2 cut(s) 1096, 1114
MhlI GDGCHC 2 cut(s) 648, 776
MlyI GAGTC 3 cut(s) 106, 362, 1268
Mph1103I ATGCAT 1 cut(s) 184
MseI TTAA 7 cut(s) 47, 360, 576, 1085, 1101, 1404, 1421
MslI CAYNNNNRTG 1 cut(s) 605
MspA1I CMGCKG 1 cut(s) 118
MspR9I CCNGG 3 cut(s) 10, 201, 249
MvaI CCWGG 3 cut(s) 10, 201, 249
MvnI CGCG 1 cut(s) 728
MwoI GCNNNNNNNGC 3 cut(s) 205, 734, 1382
NcoI CCATGG 1 cut(s) 707
NdeII GATC 6 cut(s) 829, 872, 1062, 1096, 1114, 1432
NlaIII CATG 5 cut(s) 241, 711, 931, 949, 1433
NlaIV GGNNCC 4 cut(s) 83, 933, 1041, 1116
NmuCI GTSAC 1 cut(s) 962
NsiI ATGCAT 1 cut(s) 184
NspV TTCGAA 1 cut(s) 149
PceI AGGCCT 1 cut(s) 199
PfeI GAWTC 6 cut(s) 29, 65, 146, 625, 720, 881
PkrI GCNGC 4 cut(s) 333, 461, 730, 1171
PleI GAGTC 3 cut(s) 106, 362, 1267
PpsI GAGTC 3 cut(s) 106, 362, 1267
Psp124BI GAGCTC 1 cut(s) 648
Psp6I CCWGG 3 cut(s) 8, 199, 247
PspFI CCCAGC 1 cut(s) 118
PspGI CCWGG 3 cut(s) 8, 199, 247
PspN4I GGNNCC 4 cut(s) 83, 933, 1041, 1116
PspPI GGNCC 2 cut(s) 6, 81
PsrI GAACNNNNNNTAC 2 cut(s) 679, 711
PstI CTGCAG 1 cut(s) 333
PstNI CAGNNNCTG 2 cut(s) 743, 1225
PsuI RGATCY 2 cut(s) 1096, 1114
PvuII CAGCTG 1 cut(s) 118
RsaI GTAC 5 cut(s) 244, 470, 702, 980, 1224
RsaNI GTAC 5 cut(s) 243, 469, 701, 979, 1223
RseI CAYNNNNRTG 1 cut(s) 605
SacI GAGCTC 1 cut(s) 648
SaqAI TTAA 7 cut(s) 47, 360, 576, 1085, 1101, 1404, 1421
SatI GCNGC 4 cut(s) 332, 460, 729, 1170
Sau3AI GATC 6 cut(s) 829, 872, 1062, 1096, 1114, 1432
Sau96I GGNCC 2 cut(s) 6, 81
ScaI AGTACT 1 cut(s) 244
SchI GAGTC 3 cut(s) 106, 362, 1268
ScrFI CCNGG 3 cut(s) 10, 201, 249
SduI GDGCHC 2 cut(s) 648, 776
SfaNI GCATC 3 cut(s) 191, 1240, 1385
SfcI CTRYAG 2 cut(s) 279, 329
SfiI GGCCNNNNNGGCC 1 cut(s) 205
SfuI TTCGAA 1 cut(s) 149
SinI GGWCC 1 cut(s) 6
SmiMI CAYNNNNRTG 1 cut(s) 605
SmlI CTYRAG 1 cut(s) 823
SmoI CTYRAG 1 cut(s) 823
SseBI AGGCCT 1 cut(s) 199
SsiI CCGC 5 cut(s) 16, 503, 728, 1130, 1399
SspMI CTAG 4 cut(s) 306, 635, 654, 885
SstI GAGCTC 1 cut(s) 648
StuI AGGCCT 1 cut(s) 199
StyD4I CCNGG 3 cut(s) 8, 199, 247
StyI CCWWGG 2 cut(s) 653, 707
TaaI ACNGT 2 cut(s) 100, 843
TaiI ACGT 1 cut(s) 801
TaqI TCGA 3 cut(s) 149, 285, 310
TatI WGTACW 3 cut(s) 242, 468, 700
TauI GCSGC 1 cut(s) 731
TfiI GAWTC 6 cut(s) 29, 65, 146, 625, 720, 881
Tru1I TTAA 7 cut(s) 47, 360, 576, 1085, 1101, 1404, 1421
Tru9I TTAA 7 cut(s) 47, 360, 576, 1085, 1101, 1404, 1421
TscAI CASTG 4 cut(s) 469, 882, 967, 1387
TseFI GTSAC 1 cut(s) 962
TseI GCWGC 3 cut(s) 331, 459, 1169
Tsp45I GTSAC 1 cut(s) 962
TspDTI ATGAA 6 cut(s) 12, 189, 357, 779, 934, 1287
TspGWI ACGGA 1 cut(s) 487
TspRI CASTG 4 cut(s) 469, 882, 967, 1387
VpaK11BI GGWCC 1 cut(s) 6
XapI RAATTY 4 cut(s) 19, 560, 1200, 1309
XmaJI CCTAGG 1 cut(s) 653
XmiI GTMKAC 1 cut(s) 522
XspI CTAG 4 cut(s) 306, 635, 654, 885
ZrmI AGTACT 1 cut(s) 244
Zsp2I ATGCAT 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.