Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001638

Physical Location & Seq

Genomic Coordinates Reverse (-)

31075636 .. 31081021

Gene Structure 5386 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1182300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGCGTCAAAACTTCATTTCGTCCTTTTGCTTCCTATTATTTGGTATTATTCGGAGAGACAGACTTATCTGCCGACGCACAACAACATATTAACACAAAAGGCAAATCCACTGAAAATACACACACGCTCTCTCTATCTCTGTCATCCCAAACAAACGCTAGCAGTTTTTCGCTTGAGATTTCTCTCCATTAATTTCCCGTCGCCATTACCCACCTTTAAGCTATCCTCTCTTGGAAACCCAATTAAAGTACCGTTCTTTTGCTCTGCACCACCAGTCAGAGATTCAGAGACTCAGAGACTCAGAGAGCAACTACCTCCTCTGCTTCCATGGCCGGTTCAAACTTGCAGAACAAGTACCTCCTCATCCAACTCCCTTCAATTATTTGCATCCGCCTCAAATGAGTGGATTTCGGAACAAAAGATGAATCGGCGCGTCCCCGATTTCGAAATGGACTACGAGTACTTACTTCCCACCACCTCTGCTCTGAACCGACCCAGAAAATCAACCATGCCGGAAGACGATATCATGGAGCTGCTATGGCAGGACGGCCAAGTCGTGATGCAGAGCCAGAACCAGAGGTCTTCAGTCAATAGTAAAAGATCGCACCAGTCCAAATACGACGTCGTATTGCCCGACGACGGGGGTGGCATCACCAGACCGGCCCCCCAACCCCAACCCCAACTGCCGGCTCAGAACCCGCACCTGTTTATTCAAGAAGATGAAATGGCCTCGTGGCTTCAGTACCCGCTCGTCGACGAGCCCTTCTCCGCCGGCCTCCTCTATCCCGATTCGACCACCTCCGAGCACCGGACGCCCCAGGTTTCGGGGCCGGCGCCAGCTTCGAGGCCGCCGATCCACCGGCCGAGGAGGACCGAGCTCCAGAACTTCCTGCAGTCCGACACGACCAACAACAACGACGCCAGCAGCAACAGGCCTATGATTTCGGAAACGGCGCCGTCGAGCTCGAAGAAGAGCGTGGTAAGGGAGACGACGACGGTGGTGGGTTCCAGCGACACTCCGCTGGTGGGCTCATGCTCTAGGGCTTTGGATTCTAGGCCCGACGGCGCTGGTGGCGGCTTGGCTAATGGAGCGACGTCGTTAACCGCTGCAACCGCTGCGACCGCTGCGACGTCGTTTCCTGGAAATGAATTGACCACGTGTGAGATGTCGCTGACGTCGTCTCCAGGAGGCTCCAGTGCGAGCGCCGAGCCGGATTCGGCTCCCAAGCCGCCGCTGACTGCCGATAACCGGAAGAGGAAAGGGAGAGAAGCCGCCGCCGCCGACGACGACGCTGAGTTTCAAAGCAGGGATGTTGAGTTTGAATCTGCCAATGGAAAGAAACAACTCCGAGGATTGACATCATCTACAAAGAGATCGCGAGCTGCAGAGGTCCACAATCTCTCCGAGAGGAGACGTCGAGATAGAATAAATGAAAAGATGAAGGCTTTACAAGAACTAATACCTCGGTGCAACAAATCGGACAAAGCATCAATGCTGGATGAAGCAATTGAGTACTTGAAATCTCTCCAGTTACAAGTACAGATGATGTCCATGGGATACGGCATGATCCCTATGATGTTTCCTGGAGTTCAGCAGATGATGTCCGTGCCCATGGGGATGGGAATTGGAATGGGCATGGGCATGGGAATGGAAATGGCCGGCATCAGTCACCCTATGATGCCATTTCCAAATGTAATGGCCGGTTCACCCATGCCAACAGCAGCTGCACTTATGGGACCTAGGTTCCCTATACCACCATTTCACATGCAGCCTATTCCTGCAAGTGATCCTACCGGAGTTCCAGCAGTCAACAAGACAGATCAAATGATAAACTCGCTCAGGGCACAAAATCCAAACCAATCACACATGCCAAATTTTGCAGATCCTTACCAGCAGTTTTTCAGTCCCCAACAGATGCAGTTGCCACTGCAGCACAACCAAGCAATGCCCCAGCCAACTACTGGCAAGCCGAGTTCCAGTAGGGGACCTGAAACTCATGAAAACCATCAACCAGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006725 GO:0006778 GO:0006779 GO:0006783 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009959 GO:0009987 GO:0010017 GO:0010029 GO:0010033 GO:0010099 GO:0010100 GO:0010114 GO:0010161 GO:0010187 GO:0010313 GO:0010468 GO:0010476 GO:0010556 GO:0015994 GO:0015995 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042168 GO:0042221 GO:0042440 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044464 GO:0046148 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051186 GO:0051188 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071495 GO:0071704 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1900140 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000030 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

HLH

Protein Analysis

674

Amino Acids

74.13

Weight (kDa)

8.59

Isoelectric Point (pI)

63.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	464 - 511	2e-13	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	470 - 512	1.1e-07	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28800 AT4G28800 AT4G28811 AT4G28815 AT4G28815
fragaria_vesca	FvH4_2g19790 FvH4_2g19790 FvH4_2g19790 FvH4_2g19790 FvH4_2g19790 FvH4_2g19790 FvH4_2g19790
malus_domestica	MD05G1182300.v1.1 MD10G1170600.v1.1
prunus_persica	Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1
pyrus_communis	pycom10g14700
rosa_chinensis	RchiOBHm_Chr6g0285491
rosa_laevigata	RLG00000012635
rosa_multiflora	Rmu_sc0000284.1_g000001
rosa_roxburghii	Rroxscaffold_7G00183100
rosa_rugosa	Rorug06G0174800 Rorug06G0174800 Rorug06G0174900
rosa_samantha	Rh6AG286500 Rh6BG287700 Rh6CG288800 Rh6DG281600
rosa_wichuraiana	Rw6G024610

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	554
AatII	GACGTC	5 cut(s)	627, 1100, 1136, 1181, 1420
AccB1I	GGYRCC	2 cut(s)	835, 955
AccB7I	CCANNNNNTGG	1 cut(s)	1964
AccBSI	CCGCTC	1 cut(s)	751
AccI	GTMKAC	1 cut(s)	756
AccII	CGCG	2 cut(s)	435, 1381
AclWI	GGATC	4 cut(s)	850, 1564, 1784, 1880
AcoI	YGGCCR	5 cut(s)	332, 550, 863, 1659, 1701
AcsI	RAATTY	1 cut(s)	1876
AcuI	CTGAAG	2 cut(s)	570, 725
AcvI	CACGTG	1 cut(s)	1161
AfaI	GTAC	6 cut(s)	252, 358, 464, 746, 1517, 1542
AfiI	CCNNNNNNNGG	8 cut(s)	641, 642, 688, 810, 826, 1028, 1251, 1964
AflIII	ACRYGT	1 cut(s)	1160
AgsI	TTSAA	6 cut(s)	341, 380, 716, 1304, 1325, 1522
AjnI	CCWGG	5 cut(s)	819, 1141, 1186, 1585, 2014
AluBI	AGCT	7 cut(s)	223, 535, 842, 880, 966, 1385, 1727
AluI	AGCT	7 cut(s)	223, 535, 842, 880, 966, 1385, 1727
Alw21I	GWGCWC	3 cut(s)	810, 882, 968
Alw26I	GTCTC	6 cut(s)	52, 284, 292, 983, 1188, 1408
AlwI	GGATC	4 cut(s)	850, 1564, 1784, 1880
AlwNI	CAGNNNCTG	1 cut(s)	1727
ApoI	RAATTY	1 cut(s)	1876
ArsI	GACNNNNNNTTYG	2 cut(s)	609, 641
AseI	ATTAAT	1 cut(s)	192
AspA2I	CCTAGG	1 cut(s)	1742
AspLEI	GCGC	5 cut(s)	435, 838, 958, 1070, 1208
AspS9I	GGNCC	7 cut(s)	664, 830, 873, 1059, 1393, 1739, 1988
AsuHPI	GGTGA	3 cut(s)	646, 1664, 1701
AsuII	TTCGAA	1 cut(s)	447
AsuNHI	GCTAGC	1 cut(s)	160
AvaII	GGWCC	4 cut(s)	873, 1393, 1739, 1988
AvrII	CCTAGG	1 cut(s)	1742
BaeGI	GKGCMC	2 cut(s)	1614, 1849
BanI	GGYRCC	2 cut(s)	835, 955
BanII	GRGCYC	4 cut(s)	765, 882, 968, 1034
BauI	CACGAG	1 cut(s)	733
BbrPI	CACGTG	1 cut(s)	1161
BbsI	GAAGAC	2 cut(s)	525, 576
Bbv12I	GWGCWC	3 cut(s)	810, 882, 968
BccI	CCATC	2 cut(s)	1615, 2016
BceAI	ACGGC	5 cut(s)	565, 943, 969, 1081, 1579
BciT130I	CCWGG	5 cut(s)	821, 1143, 1188, 1587, 2016
BciVI	GTATCC	1 cut(s)	1553
BcoDI	GTCTC	6 cut(s)	52, 284, 292, 983, 1188, 1408
BfaI	CTAG	4 cut(s)	161, 1041, 1056, 1743
BfmI	CTRYAG	3 cut(s)	893, 1386, 1931
BfoI	RGCGCY	4 cut(s)	839, 959, 1071, 1209
BfuI	GTATCC	1 cut(s)	1553
BlnI	CCTAGG	1 cut(s)	1742
BmcAI	AGTACT	2 cut(s)	464, 1517
Bme1390I	CCNGG	5 cut(s)	821, 1143, 1188, 1587, 2016
Bme18I	GGWCC	4 cut(s)	873, 1393, 1739, 1988
BmgT120I	GGNCC	7 cut(s)	664, 830, 873, 1059, 1393, 1739, 1988
BmrFI	CCNGG	5 cut(s)	821, 1143, 1188, 1587, 2016
BmsI	GCATC	7 cut(s)	398, 552, 660, 1499, 1671, 1674, 1908
BmtI	GCTAGC	1 cut(s)	164
BpiI	GAAGAC	2 cut(s)	525, 576
BplI	GAGNNNNNCTC	2 cut(s)	752, 784
BpmI	CTGGAG	5 cut(s)	866, 1170, 1180, 1514, 1608
Bpu10I	CCTNAGC	1 cut(s)	1841
Bpu14I	TTCGAA	1 cut(s)	447
BpuEI	CTTGAG	1 cut(s)	196
BsaAI	YACGTR	1 cut(s)	1161
BsaBI	GATNNNNATC	1 cut(s)	1360
BsaJI	CCNNGG	8 cut(s)	329, 819, 866, 1351, 1466, 1554, 1614, 1742
BsaWI	WCCGGW	3 cut(s)	810, 1251, 1796
BsaXI	ACNNNNNCTCC	4 cut(s)	1168, 1198, 1388, 1418
Bsc4I	CCNNNNNNNGG	8 cut(s)	641, 642, 688, 810, 826, 1028, 1251, 1964
Bse118I	RCCGGY	8 cut(s)	334, 661, 688, 773, 832, 861, 1661, 1703
Bse1I	ACTGG	6 cut(s)	275, 610, 1197, 1531, 1969, 1980
Bse3DI	GCAATG	1 cut(s)	1953
Bse8I	GATNNNNATC	1 cut(s)	1360
BseBI	CCWGG	5 cut(s)	821, 1143, 1188, 1587, 2016
BseDI	CCNNGG	8 cut(s)	329, 819, 866, 1351, 1466, 1554, 1614, 1742
BseGI	GGATG	6 cut(s)	145, 365, 389, 1318, 1507, 1626
BseJI	GATNNNNATC	1 cut(s)	1360
BseLI	CCNNNNNNNGG	8 cut(s)	641, 642, 688, 810, 826, 1028, 1251, 1964
BseMI	GCAATG	1 cut(s)	1953
BseMII	CTCAG	5 cut(s)	308, 316, 707, 1287, 1855
BseNI	ACTGG	6 cut(s)	275, 610, 1197, 1531, 1969, 1980
BseRI	GAGGAG	5 cut(s)	309, 352, 770, 883, 1426
BseSI	GKGCMC	2 cut(s)	1614, 1849
BseX3I	CGGCCG	1 cut(s)	863
BseYI	CCCAGC	1 cut(s)	1953
BsgI	GTGCAG	2 cut(s)	252, 1713
Bsh1236I	CGCG	2 cut(s)	435, 1381
Bsh1285I	CGRYCG	2 cut(s)	866, 1125
BshNI	GGYRCC	2 cut(s)	835, 955
BsiEI	CGRYCG	2 cut(s)	866, 1125
BsiHKAI	GWGCWC	3 cut(s)	810, 882, 968
BslFI	GGGAC	4 cut(s)	422, 1752, 1893, 2001
BslI	CCNNNNNNNGG	8 cut(s)	641, 642, 688, 810, 826, 1028, 1251, 1964
BsmAI	GTCTC	6 cut(s)	52, 284, 292, 983, 1188, 1408
BsmBI	CGTCTC	3 cut(s)	983, 1188, 1408
BsmFI	GGGAC	4 cut(s)	422, 1752, 1893, 2001
Bsp119I	TTCGAA	1 cut(s)	447
Bsp1286I	GDGCHC	7 cut(s)	765, 810, 882, 968, 1034, 1614, 1849
Bsp143I	GATC	7 cut(s)	602, 855, 1376, 1569, 1789, 1822, 1885
Bsp19I	CCATGG	3 cut(s)	329, 1554, 1614
Bsp68I	TCGCGA	1 cut(s)	1381
BspCNI	CTCAG	5 cut(s)	307, 315, 706, 1288, 1854
BspFNI	CGCG	2 cut(s)	435, 1381
BspHI	TCATGA	1 cut(s)	1999
BspMAI	CTGCAG	3 cut(s)	897, 1390, 1935
BspOI	GCTAGC	1 cut(s)	164
BspPI	GGATC	4 cut(s)	850, 1564, 1784, 1880
BspQI	GCTCTTC	1 cut(s)	968
BspT104I	TTCGAA	1 cut(s)	447
BspT107I	GGYRCC	2 cut(s)	835, 955
BsrBI	CCGCTC	1 cut(s)	751
BsrDI	GCAATG	1 cut(s)	1953
BsrFI	RCCGGY	8 cut(s)	334, 661, 688, 773, 832, 861, 1661, 1703
BsrI	ACTGG	6 cut(s)	275, 610, 1197, 1531, 1969, 1980
BssAI	RCCGGY	8 cut(s)	334, 661, 688, 773, 832, 861, 1661, 1703
BssECI	CCNNGG	8 cut(s)	329, 819, 866, 1351, 1466, 1554, 1614, 1742
BssMI	GATC	7 cut(s)	602, 855, 1376, 1569, 1789, 1822, 1885
BssSI	CACGAG	1 cut(s)	733
BssT1I	CCWWGG	4 cut(s)	329, 1554, 1614, 1742
Bst2BI	CACGAG	1 cut(s)	733
Bst2UI	CCWGG	5 cut(s)	821, 1143, 1188, 1587, 2016
Bst4CI	ACNGT	2 cut(s)	255, 1000
Bst6I	CTCTTC	2 cut(s)	968, 1250
BstAPI	GCANNNNNTGC	1 cut(s)	1118
BstBAI	YACGTR	1 cut(s)	1161
BstBI	TTCGAA	1 cut(s)	447
BstDEI	CTNAG	5 cut(s)	294, 302, 693, 1296, 1841
BstDSI	CCRYGG	3 cut(s)	329, 1554, 1614
BstF5I	GGATG	6 cut(s)	145, 365, 389, 1318, 1507, 1626
BstFNI	CGCG	2 cut(s)	435, 1381
BstH2I	RGCGCY	4 cut(s)	839, 959, 1071, 1209
BstHHI	GCGC	5 cut(s)	435, 838, 958, 1070, 1208
BstKTI	GATC	7 cut(s)	605, 858, 1379, 1572, 1792, 1825, 1888
BstMAI	GTCTC	6 cut(s)	52, 284, 292, 983, 1188, 1408
BstMBI	GATC	7 cut(s)	602, 855, 1376, 1569, 1789, 1822, 1885
BstMCI	CGRYCG	2 cut(s)	866, 1125
BstNI	CCWGG	5 cut(s)	821, 1143, 1188, 1587, 2016
BstNSI	RCATGY	2 cut(s)	1771, 1873
BstSCI	CCNGG	5 cut(s)	819, 1141, 1186, 1585, 2014
BstSFI	CTRYAG	3 cut(s)	893, 1386, 1931
BstSLI	GKGCMC	2 cut(s)	1614, 1849
BstUI	CGCG	2 cut(s)	435, 1381
BstV2I	GAAGAC	2 cut(s)	525, 576
BstX2I	RGATCY	1 cut(s)	1885
BstXI	CCANNNNNNTGG	1 cut(s)	1621
BstYI	RGATCY	1 cut(s)	1885
BstZI	CGGCCG	1 cut(s)	863
BsuI	GTATCC	1 cut(s)	1553
BtgI	CCRYGG	3 cut(s)	329, 1554, 1614
BtsCI	GGATG	6 cut(s)	145, 365, 389, 1318, 1507, 1626
BtsI	GCAGTG	1 cut(s)	1928
BtsIMutI	CAGTG	3 cut(s)	110, 1204, 1928
BtuMI	TCGCGA	1 cut(s)	1381
CaiI	CAGNNNCTG	1 cut(s)	1727
CciI	TCATGA	1 cut(s)	1999
CfoI	GCGC	5 cut(s)	435, 838, 958, 1070, 1208
Cfr10I	RCCGGY	8 cut(s)	334, 661, 688, 773, 832, 861, 1661, 1703
Cfr13I	GGNCC	7 cut(s)	664, 830, 873, 1059, 1393, 1739, 1988
CseI	GACGC	5 cut(s)	85, 424, 823, 929, 1301
CsiI	ACCWGGT	1 cut(s)	2014
Csp6I	GTAC	6 cut(s)	251, 357, 463, 745, 1516, 1541
CviQI	GTAC	6 cut(s)	251, 357, 463, 745, 1516, 1541
DdeI	CTNAG	5 cut(s)	294, 302, 693, 1296, 1841
DinI	GGCGCC	2 cut(s)	837, 957
DpnI	GATC	7 cut(s)	604, 857, 1378, 1571, 1791, 1824, 1887
DpnII	GATC	7 cut(s)	602, 855, 1376, 1569, 1789, 1822, 1885
DrdI	GACNNNNNNGTC	1 cut(s)	554
DseDI	GACNNNNNNGTC	1 cut(s)	554
EaeI	YGGCCR	5 cut(s)	332, 550, 863, 1659, 1701
EagI	CGGCCG	1 cut(s)	863
Eam1104I	CTCTTC	2 cut(s)	968, 1250
EarI	CTCTTC	2 cut(s)	968, 1250
EciI	GGCGGA	2 cut(s)	382, 760
Ecl136II	GAGCTC	2 cut(s)	880, 966
EclXI	CGGCCG	1 cut(s)	863
Eco130I	CCWWGG	4 cut(s)	329, 1554, 1614, 1742
Eco147I	AGGCCT	1 cut(s)	937
Eco24I	GRGCYC	4 cut(s)	765, 882, 968, 1034
Eco32I	GATATC	1 cut(s)	526
Eco47I	GGWCC	4 cut(s)	873, 1393, 1739, 1988
Eco52I	CGGCCG	1 cut(s)	863
Eco53kI	GAGCTC	2 cut(s)	880, 966
Eco57I	CTGAAG	2 cut(s)	570, 725
Eco72I	CACGTG	1 cut(s)	1161
EcoICRI	GAGCTC	2 cut(s)	880, 966
EcoO109I	RGGNCCY	2 cut(s)	1739, 1988
EcoRII	CCWGG	5 cut(s)	819, 1141, 1186, 1585, 2014
EcoRV	GATATC	1 cut(s)	526
EcoT14I	CCWWGG	4 cut(s)	329, 1554, 1614, 1742
EcoT38I	GRGCYC	4 cut(s)	765, 882, 968, 1034
EgeI	GGCGCC	2 cut(s)	837, 957
EheI	GGCGCC	2 cut(s)	837, 957
ErhI	CCWWGG	4 cut(s)	329, 1554, 1614, 1742
Esp3I	CGTCTC	3 cut(s)	983, 1188, 1408
FaqI	GGGAC	4 cut(s)	422, 1752, 1893, 2001
FauI	CCCGC	2 cut(s)	708, 756
FblI	GTMKAC	1 cut(s)	756
FokI	GGATG	6 cut(s)	132, 352, 376, 1325, 1514, 1633
FriOI	GRGCYC	4 cut(s)	765, 882, 968, 1034
FspBI	CTAG	4 cut(s)	161, 1041, 1056, 1743
GlaI	GCGC	5 cut(s)	434, 837, 957, 1069, 1207
GsaI	CCCAGC	1 cut(s)	1957
GsuI	CTGGAG	5 cut(s)	866, 1170, 1180, 1514, 1608
HaeII	RGCGCY	4 cut(s)	839, 959, 1071, 1209
HgaI	GACGC	5 cut(s)	85, 424, 823, 929, 1301
HhaI	GCGC	5 cut(s)	435, 838, 958, 1070, 1208
Hin6I	GCGC	5 cut(s)	433, 836, 956, 1068, 1206
HinP1I	GCGC	5 cut(s)	433, 836, 956, 1068, 1206
HincII	GTYRAC	3 cut(s)	757, 1104, 1813
HindII	GTYRAC	3 cut(s)	757, 1104, 1813
HinfI	GANTC	8 cut(s)	284, 292, 300, 427, 791, 1052, 1217, 1325
HpaI	GTTAAC	1 cut(s)	1104
HphI	GGTGA	3 cut(s)	646, 1664, 1701
Hpy166II	GTNNAC	5 cut(s)	757, 1104, 1396, 1709, 1813
Hpy188III	TCNNGA	7 cut(s)	559, 716, 788, 883, 1380, 1421, 2000
Hpy8I	GTNNAC	5 cut(s)	757, 1104, 1396, 1709, 1813
HpyAV	CCTTC	3 cut(s)	386, 775, 1438
HpyCH4III	ACNGT	2 cut(s)	255, 1000
HpyCH4IV	ACGT	6 cut(s)	624, 1097, 1133, 1160, 1178, 1417
HpyF3I	CTNAG	5 cut(s)	294, 302, 693, 1296, 1841
HpySE526I	ACGT	6 cut(s)	624, 1097, 1133, 1160, 1178, 1417
HspAI	GCGC	5 cut(s)	433, 836, 956, 1068, 1206
KasI	GGCGCC	2 cut(s)	835, 955
KroI	GCCGGC	4 cut(s)	688, 773, 832, 1661
KroNI	GCCGGC	4 cut(s)	690, 775, 834, 1663
KspAI	GTTAAC	1 cut(s)	1104
Kzo9I	GATC	7 cut(s)	602, 855, 1376, 1569, 1789, 1822, 1885
LguI	GCTCTTC	1 cut(s)	968
LmnI	GCTCC	5 cut(s)	532, 885, 1091, 1199, 1228
LweI	GCATC	7 cut(s)	398, 552, 660, 1499, 1671, 1674, 1908
MabI	ACCWGGT	1 cut(s)	2014
MaeI	CTAG	4 cut(s)	161, 1041, 1056, 1743
MaeII	ACGT	6 cut(s)	624, 1097, 1133, 1160, 1178, 1417
MaeIII	GTNAC	2 cut(s)	1533, 1670
MalI	GATC	7 cut(s)	604, 857, 1378, 1571, 1791, 1824, 1887
MbiI	CCGCTC	1 cut(s)	751
MboI	GATC	7 cut(s)	602, 855, 1376, 1569, 1789, 1822, 1885
MboII	GAAGA	6 cut(s)	530, 576, 731, 982, 985, 1267
MfeI	CAATTG	1 cut(s)	1509
MflI	RGATCY	1 cut(s)	1885
MhlI	GDGCHC	7 cut(s)	765, 810, 882, 968, 1034, 1614, 1849
MluCI	AATT	7 cut(s)	193, 243, 380, 1151, 1509, 1626, 1876
Mly113I	GGCGCC	2 cut(s)	836, 956
MlyI	GAGTC	2 cut(s)	286, 294
MmeI	TCCRAC	2 cut(s)	393, 924
MroNI	GCCGGC	4 cut(s)	688, 773, 832, 1661
MseI	TTAA	6 cut(s)	92, 192, 219, 246, 1103, 2020
MslI	CAYNNNNRTG	3 cut(s)	1619, 1643, 1649
MspA1I	CMGCKG	6 cut(s)	1024, 1109, 1118, 1127, 1237, 1727
MspR9I	CCNGG	5 cut(s)	821, 1143, 1188, 1587, 2016
MunI	CAATTG	1 cut(s)	1509
MvaI	CCWGG	5 cut(s)	821, 1143, 1188, 1587, 2016
MvnI	CGCG	2 cut(s)	435, 1381
NaeI	GCCGGC	4 cut(s)	690, 775, 834, 1663
NarI	GGCGCC	2 cut(s)	836, 956
NcoI	CCATGG	3 cut(s)	329, 1554, 1614
NdeII	GATC	7 cut(s)	602, 855, 1376, 1569, 1789, 1822, 1885
NgoMIV	GCCGGC	4 cut(s)	688, 773, 832, 1661
NheI	GCTAGC	1 cut(s)	160
NmeAIII	GCCGAG	3 cut(s)	891, 1234, 1998
NmuCI	GTSAC	1 cut(s)	1670
NruI	TCGCGA	1 cut(s)	1381
NspI	RCATGY	2 cut(s)	1771, 1873
NspV	TTCGAA	1 cut(s)	447
PagI	TCATGA	1 cut(s)	1999
PceI	AGGCCT	1 cut(s)	937
PciSI	GCTCTTC	1 cut(s)	968
PcsI	WCGNNNNNNNCGW	5 cut(s)	555, 633, 851, 959, 1178
PdiI	GCCGGC	4 cut(s)	690, 775, 834, 1663
PfeI	GAWTC	6 cut(s)	284, 427, 791, 1052, 1217, 1325
PflFI	GACNNNGTC	1 cut(s)	1180
PflMI	CCANNNNNTGG	1 cut(s)	1964
PfoI	TCCNGGA	3 cut(s)	1141, 1186, 1585
PleI	GAGTC	2 cut(s)	286, 294
PluTI	GGCGCC	2 cut(s)	839, 959
PmaCI	CACGTG	1 cut(s)	1161
PmlI	CACGTG	1 cut(s)	1161
PpsI	GAGTC	2 cut(s)	286, 294
Ppu21I	YACGTR	1 cut(s)	1161
PpuMI	RGGWCCY	2 cut(s)	1739, 1988
PshBI	ATTAAT	1 cut(s)	192
Psp124BI	GAGCTC	2 cut(s)	882, 968
Psp5II	RGGWCCY	2 cut(s)	1739, 1988
Psp6I	CCWGG	5 cut(s)	819, 1141, 1186, 1585, 2014
PspCI	CACGTG	1 cut(s)	1161
PspFI	CCCAGC	1 cut(s)	1953
PspGI	CCWGG	5 cut(s)	819, 1141, 1186, 1585, 2014
PspPI	GGNCC	7 cut(s)	664, 830, 873, 1059, 1393, 1739, 1988
PspPPI	RGGWCCY	2 cut(s)	1739, 1988
PstI	CTGCAG	3 cut(s)	897, 1390, 1935
PstNI	CAGNNNCTG	1 cut(s)	1727
PsuI	RGATCY	1 cut(s)	1885
PsyI	GACNNNGTC	1 cut(s)	1180
PvuII	CAGCTG	1 cut(s)	1727
RruI	TCGCGA	1 cut(s)	1381
RsaI	GTAC	6 cut(s)	252, 358, 464, 746, 1517, 1542
RsaNI	GTAC	6 cut(s)	251, 357, 463, 745, 1516, 1541
RseI	CAYNNNNRTG	3 cut(s)	1619, 1643, 1649
SacI	GAGCTC	2 cut(s)	882, 968
SalI	GTCGAC	1 cut(s)	755
SapI	GCTCTTC	1 cut(s)	968
SaqAI	TTAA	6 cut(s)	92, 192, 219, 246, 1103, 2020
Sau3AI	GATC	7 cut(s)	602, 855, 1376, 1569, 1789, 1822, 1885
Sau96I	GGNCC	7 cut(s)	664, 830, 873, 1059, 1393, 1739, 1988
ScaI	AGTACT	2 cut(s)	464, 1517
SchI	GAGTC	2 cut(s)	286, 294
ScrFI	CCNGG	5 cut(s)	821, 1143, 1188, 1587, 2016
SduI	GDGCHC	7 cut(s)	765, 810, 882, 968, 1034, 1614, 1849
SexAI	ACCWGGT	1 cut(s)	2014
SfaNI	GCATC	7 cut(s)	398, 552, 660, 1499, 1671, 1674, 1908
SfcI	CTRYAG	3 cut(s)	893, 1386, 1931
SfoI	GGCGCC	2 cut(s)	837, 957
SfuI	TTCGAA	1 cut(s)	447
SgrDI	CGTCGACG	1 cut(s)	755
SinI	GGWCC	4 cut(s)	873, 1393, 1739, 1988
SmiMI	CAYNNNNRTG	3 cut(s)	1619, 1643, 1649
SmlI	CTYRAG	1 cut(s)	175
SmoI	CTYRAG	1 cut(s)	175
Sse9I	AATT	7 cut(s)	193, 243, 380, 1151, 1509, 1626, 1876
SseBI	AGGCCT	1 cut(s)	937
SspDI	GGCGCC	2 cut(s)	835, 955
SspMI	CTAG	4 cut(s)	161, 1041, 1056, 1743
SstI	GAGCTC	2 cut(s)	882, 968
StuI	AGGCCT	1 cut(s)	937
StyD4I	CCNGG	5 cut(s)	819, 1141, 1186, 1585, 2014
StyI	CCWWGG	4 cut(s)	329, 1554, 1614, 1742
TaaI	ACNGT	2 cut(s)	255, 1000
TaiI	ACGT	6 cut(s)	627, 1100, 1136, 1163, 1181, 1420
TaqI	TCGA	7 cut(s)	447, 756, 794, 845, 962, 968, 1420
TaqII	GACCGA	1 cut(s)	890
TasI	AATT	7 cut(s)	193, 243, 380, 1151, 1509, 1626, 1876
TatI	WGTACW	3 cut(s)	462, 1515, 1540
TauI	GCSGC	7 cut(s)	853, 1080, 1234, 1237, 1277, 1280, 1283
TfiI	GAWTC	6 cut(s)	284, 427, 791, 1052, 1217, 1325
Tru1I	TTAA	6 cut(s)	92, 192, 219, 246, 1103, 2020
Tru9I	TTAA	6 cut(s)	92, 192, 219, 246, 1103, 2020
TscAI	CASTG	3 cut(s)	117, 1204, 1935
TseFI	GTSAC	1 cut(s)	1670
Tsp45I	GTSAC	1 cut(s)	1670
TspDTI	ATGAA	8 cut(s)	5, 440, 738, 1164, 1449, 1457, 1518, 2016
TspGWI	ACGGA	1 cut(s)	1597
TspRI	CASTG	3 cut(s)	117, 1204, 1935
Tth111I	GACNNNGTC	1 cut(s)	1180
Van91I	CCANNNNNTGG	1 cut(s)	1964
VpaK11BI	GGWCC	4 cut(s)	873, 1393, 1739, 1988
VspI	ATTAAT	1 cut(s)	192
XapI	RAATTY	1 cut(s)	1876
XceI	RCATGY	2 cut(s)	1771, 1873
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1961
XmaJI	CCTAGG	1 cut(s)	1742
XmiI	GTMKAC	1 cut(s)	756
XspI	CTAG	4 cut(s)	161, 1041, 1056, 1743
ZraI	GACGTC	5 cut(s)	625, 1098, 1134, 1179, 1418
ZrmI	AGTACT	2 cut(s)	464, 1517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.