Prupe.8G209100_v2.0.a1

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0001638
Physical Location & Seq
Reverse (-)
19425028 .. 19429856
4829 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G209100.5

Sequence Viewer

Length: 1596 bp
ATGAATCGGTGCGTCCCCGATTTTGAAATGGAGGATGATTATTCAATTCCCACTTCCTCTGCCCCGAACCGCCTCAGAAAATCATCCCTGCCAGATGATGAGATCATGGAGCTGCTATGGCAAAATGGTCAAGTTGTGATGCAGAGCCAGAACCAAAGGCCTTCGCCTAACAACAAAAAGTCGTCACAGGCCCCATCCAAATACGCCGCCGTCTTGCCCGAAGACAGAGACATCCCCAGACCCCAACCCCATCCCACACCTCAAAACCACCAGCTGTTTATGCACGAAGACGAAATGGCTTCTTGGCTTCAGTACCCTCTCGTCGACGACCCCTTTTGCGCCGACCTCCTCTACCCCGATTCCTCCACCGTTCATCAAACCAACACCAACACCGCCGCCGCCGCCGAACTCCGGCCTAATCCTATTTCTGCACCGCCGTCCAAGCCGCCGATTCATCCGCCGAGGAGGACCGAGCTCCAGAACTTTCTCCCCTTCGCCAAGACCAACAACAACACGGCTAGGGTTTCGGAAACGGCACCGTCCAGCTCCAAGAGCGTGGTGAGGGAGTCGACGACGGTGGTGGACTCCTGCGATACTCCGCTGGTGGGCCACAGCTCTAGGGCTTTGGATTCCGGGCTCGACGGCGGCGGCGGCGGCGGCGGAGTGACTGCCGGTGCTGCGACGTCGTTTGCTACTGTCGCTACTGCTAATGCTGCGACGTCGTTTACTGGGAAAGAGATTATGACGTGTGAGATGTCGCTGACTTCGTCGCCCGGCGGCTCCAGTGCGAGTGCCAGCGTGAGCGCCGAGCCGATATCGTCTCAGAAGCCGCGGGCGGGCGAGGATCGGAAGCGGAAAGGGAGAGAAGCCGAGGACGACGGCGAGTTTCAGAGCGAGGATGTTGAGTTTGAATCTGCCAACGGAAAAAAACAAGCTCGAGGATCAACGTCTACAAAGAGATCCCGTGCTGCCGAGGTCCACAATCTCTCCGAGAGGAGACGTCGAGATAGGATAAATGAAAAGATGAAGGCTTTACAAGAACTAATACCTCGTTGCAACAAGTCAGACAAAGCGTCAATGCTGGATGAAGCAATTGAGTACTTGAAATCACTTCAGTTACAAGTACAGATGATGTCCATGGGATGCGGCATGGTACCTATGATGTTTCCTGGTGTTCAGCAGTATATGCCGATGGGGATGGGTATGGGAATGGGAATGGGCATAGGAATGGAAATGGCAGGCATGACCCGGCCTATGATGCCATTTCCGAATGTGCTAGCTGGTTCATCCATGCCAACAGCAGCTGCACATTTGGGACCTAGGTTCCCTGTGCCACCATTTCATATGCAGCCTATTCCTGCAAATGATCCTGCCAGAGTTCAAGCAACAAATCAGTCAGATCAAATGCTAAACGCGCTTGCTGCTCAAAATCCGAACCAATCACGTATGCCAAATTTTGCAGATCCTTATCAGCAGTTTTTCAATCCCCAGCAGATGCAGTTGCCACTACAGCAGAATCAAGCAATGGCCCAGCCTAGTAGCAAGCCAAGTTCCAGTAAGGGACTTGAAACTCACGAAAACCCTCAATCAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006725 GO:0006778 GO:0006779 GO:0006783 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009959 GO:0009987 GO:0010017 GO:0010029 GO:0010033 GO:0010099 GO:0010100 GO:0010114 GO:0010161 GO:0010187 GO:0010313 GO:0010468 GO:0010476 GO:0010556 GO:0015994 GO:0015995 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042168 GO:0042221 GO:0042440 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044464 GO:0046148 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051186 GO:0051188 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071495 GO:0071704 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1900140 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000030 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
HLH

Protein Analysis

532

Amino Acids

57.7

Weight (kDa)

5.99

Isoelectric Point (pI)

61.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 686, 722, 1003
Acc65I GGTACC 1 cut(s) 1153
AccB1I GGYRCC 2 cut(s) 535, 1153
AccI GTMKAC 3 cut(s) 324, 569, 950
AccII CGCG 2 cut(s) 832, 1415
AclWI GGATC 5 cut(s) 852, 949, 954, 1361, 1457
AcsI RAATTY 1 cut(s) 1453
AcuI CTGAAG 2 cut(s) 293, 1097
AcyI GRCGYC 3 cut(s) 683, 719, 1000
AfaI GTAC 4 cut(s) 314, 1100, 1125, 1155
AfiI CCNNNNNNNGG 4 cut(s) 411, 605, 836, 1589
AflIII ACRYGT 1 cut(s) 746
AgsI TTSAA 7 cut(s) 26, 45, 911, 1105, 1382, 1483, 1568
AhdI GACNNNNNGTC 1 cut(s) 1072
AjiI CACGTC 1 cut(s) 747
AjnI CCWGG 1 cut(s) 1168
AluBI AGCT 8 cut(s) 112, 274, 475, 546, 615, 935, 1280, 1304
AluI AGCT 8 cut(s) 112, 274, 475, 546, 615, 935, 1280, 1304
Alw21I GWGCWC 1 cut(s) 477
Alw26I GTCTC 3 cut(s) 222, 825, 991
AlwI GGATC 5 cut(s) 852, 949, 954, 1361, 1457
AlwNI CAGNNNCTG 1 cut(s) 1304
Ama87I CYCGRG 1 cut(s) 936
AoxI GGCC 6 cut(s) 158, 189, 413, 607, 1250, 1527
ApeKI GCWGC 8 cut(s) 112, 677, 713, 968, 1301, 1304, 1348, 1421
ApoI RAATTY 1 cut(s) 1453
Asp718I GGTACC 1 cut(s) 1153
AspA2I CCTAGG 1 cut(s) 1319
AspLEI GCGC 3 cut(s) 341, 806, 1417
AspS9I GGNCC 6 cut(s) 190, 468, 607, 976, 1316, 1528
AsuC2I CCSGG 3 cut(s) 634, 774, 1249
AsuHPI GGTGA 1 cut(s) 571
AsuNHI GCTAGC 1 cut(s) 1276
AvaI CYCGRG 1 cut(s) 936
AvaII GGWCC 3 cut(s) 468, 976, 1316
AvrII CCTAGG 1 cut(s) 1319
BanI GGYRCC 2 cut(s) 535, 1153
BanII GRGCYC 2 cut(s) 477, 639
BbsI GAAGAC 2 cut(s) 228, 294
Bbv12I GWGCWC 1 cut(s) 477
BbvI GCAGC 8 cut(s) 99, 664, 700, 955, 1291, 1313, 1360, 1408
BccI CCATC 4 cut(s) 202, 258, 1186, 1192
BceAI ACGGC 6 cut(s) 194, 421, 531, 549, 658, 895
BciT130I CCWGG 1 cut(s) 1170
BcnI CCSGG 3 cut(s) 634, 774, 1249
BcoDI GTCTC 3 cut(s) 222, 825, 991
BfaI CTAG 5 cut(s) 519, 618, 1277, 1320, 1536
BfmI CTRYAG 1 cut(s) 1508
BfoI RGCGCY 1 cut(s) 807
BlnI CCTAGG 1 cut(s) 1319
BmcAI AGTACT 1 cut(s) 1100
Bme1390I CCNGG 4 cut(s) 634, 774, 1170, 1249
Bme18I GGWCC 3 cut(s) 468, 976, 1316
BmeRI GACNNNNNGTC 1 cut(s) 1072
BmeT110I CYCGRG 1 cut(s) 936
BmgBI CACGTC 1 cut(s) 747
BmgT120I GGNCC 6 cut(s) 190, 468, 607, 976, 1316, 1528
BmiI GGNNCC 6 cut(s) 192, 537, 781, 1155, 1317, 1325
BmrFI CCNGG 4 cut(s) 634, 774, 1170, 1249
BmrI ACTGGG 1 cut(s) 738
BmsI GCATC 4 cut(s) 129, 1133, 1248, 1485
BmtI GCTAGC 1 cut(s) 1280
BmuI ACTGGG 1 cut(s) 738
BpiI GAAGAC 2 cut(s) 228, 294
BpmI CTGGAG 2 cut(s) 461, 766
BpuMI CCSGG 3 cut(s) 634, 774, 1249
BsaAI YACGTR 1 cut(s) 1445
BsaBI GATNNNNATC 1 cut(s) 1467
BsaHI GRCGYC 3 cut(s) 683, 719, 1000
BsaJI CCNNGG 6 cut(s) 461, 830, 870, 972, 1137, 1319
BsaXI ACNNNNNCTCC 2 cut(s) 971, 1001
Bsc4I CCNNNNNNNGG 4 cut(s) 411, 605, 836, 1589
Bse118I RCCGGY 1 cut(s) 671
Bse1I ACTGG 3 cut(s) 733, 783, 1554
Bse3DI GCAATG 1 cut(s) 1530
Bse8I GATNNNNATC 1 cut(s) 1467
BseBI CCWGG 1 cut(s) 1170
BseDI CCNNGG 6 cut(s) 461, 830, 870, 972, 1137, 1319
BseJI GATNNNNATC 1 cut(s) 1467
BseLI CCNNNNNNNGG 4 cut(s) 411, 605, 836, 1589
BseMI GCAATG 1 cut(s) 1530
BseMII CTCAG 2 cut(s) 88, 836
BseNI ACTGG 3 cut(s) 733, 783, 1554
BseRI GAGGAG 3 cut(s) 338, 478, 1009
BseXI GCAGC 8 cut(s) 99, 664, 700, 955, 1291, 1313, 1360, 1408
BseYI CCCAGC 2 cut(s) 1488, 1530
BsgI GTGCAG 2 cut(s) 414, 1290
Bsh1236I CGCG 2 cut(s) 832, 1415
BshFI GGCC 6 cut(s) 160, 191, 415, 609, 1252, 1529
BshNI GGYRCC 2 cut(s) 535, 1153
BsiHKAI GWGCWC 1 cut(s) 477
BsiHKCI CYCGRG 1 cut(s) 936
BsiSI CCGG 5 cut(s) 412, 633, 672, 774, 1249
BslFI GGGAC 2 cut(s) 1329, 1575
BslI CCNNNNNNNGG 4 cut(s) 411, 605, 836, 1589
BsmAI GTCTC 3 cut(s) 222, 825, 991
BsmBI CGTCTC 2 cut(s) 825, 991
BsmFI GGGAC 2 cut(s) 1329, 1575
BsnI GGCC 6 cut(s) 160, 191, 415, 609, 1252, 1529
BsoBI CYCGRG 1 cut(s) 936
Bsp1286I GDGCHC 2 cut(s) 477, 639
Bsp143I GATC 7 cut(s) 102, 844, 941, 959, 1366, 1399, 1462
Bsp19I CCATGG 1 cut(s) 1137
BspANI GGCC 6 cut(s) 160, 191, 415, 609, 1252, 1529
BspCNI CTCAG 2 cut(s) 87, 835
BspFNI CGCG 2 cut(s) 832, 1415
BspLI GGNNCC 6 cut(s) 192, 537, 781, 1155, 1317, 1325
BspOI GCTAGC 1 cut(s) 1280
BspPI GGATC 5 cut(s) 852, 949, 954, 1361, 1457
BspT107I GGYRCC 2 cut(s) 535, 1153
BsrDI GCAATG 1 cut(s) 1530
BsrFI RCCGGY 1 cut(s) 671
BsrI ACTGG 3 cut(s) 733, 783, 1554
BssAI RCCGGY 1 cut(s) 671
BssECI CCNNGG 6 cut(s) 461, 830, 870, 972, 1137, 1319
BssMI GATC 7 cut(s) 102, 844, 941, 959, 1366, 1399, 1462
BssNI GRCGYC 3 cut(s) 683, 719, 1000
BssT1I CCWWGG 2 cut(s) 1137, 1319
Bst2UI CCWGG 1 cut(s) 1170
Bst4CI ACNGT 4 cut(s) 370, 540, 577, 697
BstACI GRCGYC 3 cut(s) 683, 719, 1000
BstAPI GCANNNNNTGC 1 cut(s) 1186
BstBAI YACGTR 1 cut(s) 1445
BstC8I GCNNGC 7 cut(s) 796, 834, 838, 1240, 1278, 1419, 1544
BstDEI CTNAG 2 cut(s) 74, 822
BstDSI CCRYGG 2 cut(s) 830, 1137
BstENI CCTNNNNNAGG 1 cut(s) 1587
BstFNI CGCG 2 cut(s) 832, 1415
BstH2I RGCGCY 1 cut(s) 807
BstHHI GCGC 3 cut(s) 341, 806, 1417
BstKTI GATC 7 cut(s) 105, 847, 944, 962, 1369, 1402, 1465
BstMAI GTCTC 3 cut(s) 222, 825, 991
BstMBI GATC 7 cut(s) 102, 844, 941, 959, 1366, 1399, 1462
BstNI CCWGG 1 cut(s) 1170
BstSCI CCNGG 4 cut(s) 632, 772, 1168, 1247
BstSFI CTRYAG 1 cut(s) 1508
BstUI CGCG 2 cut(s) 832, 1415
BstV1I GCAGC 8 cut(s) 99, 664, 700, 955, 1291, 1313, 1360, 1408
BstV2I GAAGAC 2 cut(s) 228, 294
BstX2I RGATCY 2 cut(s) 959, 1462
BstXI CCANNNNNNTGG 1 cut(s) 556
BstYI RGATCY 2 cut(s) 959, 1462
BsuRI GGCC 6 cut(s) 160, 191, 415, 609, 1252, 1529
BtgI CCRYGG 2 cut(s) 830, 1137
BtrI CACGTC 1 cut(s) 747
BtsIMutI CAGTG 1 cut(s) 790
Cac8I GCNNGC 7 cut(s) 796, 834, 838, 1240, 1278, 1419, 1544
CaiI CAGNNNCTG 1 cut(s) 1304
CfoI GCGC 3 cut(s) 341, 806, 1417
Cfr10I RCCGGY 1 cut(s) 671
Cfr13I GGNCC 6 cut(s) 190, 468, 607, 976, 1316, 1528
Cfr42I CCGCGG 1 cut(s) 833
CseI GACGC 1 cut(s) 1062
Csp6I GTAC 4 cut(s) 313, 1099, 1124, 1154
CviAII CATG 5 cut(s) 106, 1138, 1150, 1243, 1291
CviQI GTAC 4 cut(s) 313, 1099, 1124, 1154
DdeI CTNAG 2 cut(s) 74, 822
DpnI GATC 7 cut(s) 104, 846, 943, 961, 1368, 1401, 1464
DpnII GATC 7 cut(s) 102, 844, 941, 959, 1366, 1399, 1462
DriI GACNNNNNGTC 1 cut(s) 1072
Eam1105I GACNNNNNGTC 1 cut(s) 1072
EciI GGCGGA 2 cut(s) 447, 675
Ecl136II GAGCTC 1 cut(s) 475
Eco130I CCWWGG 2 cut(s) 1137, 1319
Eco147I AGGCCT 1 cut(s) 160
Eco24I GRGCYC 2 cut(s) 477, 639
Eco32I GATATC 1 cut(s) 816
Eco47I GGWCC 3 cut(s) 468, 976, 1316
Eco53kI GAGCTC 1 cut(s) 475
Eco57I CTGAAG 2 cut(s) 293, 1097
Eco88I CYCGRG 1 cut(s) 936
EcoICRI GAGCTC 1 cut(s) 475
EcoNI CCTNNNNNAGG 1 cut(s) 1587
EcoO109I RGGNCCY 2 cut(s) 190, 1316
EcoRII CCWGG 1 cut(s) 1168
EcoRV GATATC 1 cut(s) 816
EcoT14I CCWWGG 2 cut(s) 1137, 1319
EcoT38I GRGCYC 2 cut(s) 477, 639
ErhI CCWWGG 2 cut(s) 1137, 1319
Esp3I CGTCTC 2 cut(s) 825, 991
FaeI CATG 5 cut(s) 109, 1141, 1153, 1246, 1294
FaqI GGGAC 2 cut(s) 1329, 1575
FatI CATG 5 cut(s) 105, 1137, 1149, 1242, 1290
FauI CCCGC 2 cut(s) 825, 829
FauNDI CATATG 1 cut(s) 1344
FblI GTMKAC 3 cut(s) 324, 569, 950
FriOI GRGCYC 2 cut(s) 477, 639
FspBI CTAG 5 cut(s) 519, 618, 1277, 1320, 1536
GlaI GCGC 3 cut(s) 340, 805, 1416
GsaI CCCAGC 2 cut(s) 1492, 1534
GsuI CTGGAG 2 cut(s) 461, 766
HaeII RGCGCY 1 cut(s) 807
HaeIII GGCC 6 cut(s) 160, 191, 415, 609, 1252, 1529
HapII CCGG 5 cut(s) 412, 633, 672, 774, 1249
HgaI GACGC 1 cut(s) 1062
HhaI GCGC 3 cut(s) 341, 806, 1417
Hin1I GRCGYC 3 cut(s) 683, 719, 1000
Hin1II CATG 5 cut(s) 109, 1141, 1153, 1246, 1294
Hin6I GCGC 3 cut(s) 339, 804, 1415
HinP1I GCGC 3 cut(s) 339, 804, 1415
HincII GTYRAC 2 cut(s) 325, 570
HindII GTYRAC 2 cut(s) 325, 570
HinfI GANTC 8 cut(s) 4, 359, 451, 566, 584, 629, 911, 1516
HpaII CCGG 5 cut(s) 412, 633, 672, 774, 1249
HphI GGTGA 1 cut(s) 571
Hpy166II GTNNAC 6 cut(s) 325, 570, 583, 726, 951, 979
Hpy188III TCNNGA 3 cut(s) 478, 1004, 1574
Hpy8I GTNNAC 6 cut(s) 325, 570, 583, 726, 951, 979
HpyAV CCTTC 3 cut(s) 171, 502, 1021
HpyCH4III ACNGT 4 cut(s) 370, 540, 577, 697
HpyCH4IV ACGT 6 cut(s) 683, 719, 746, 947, 1000, 1444
HpyCH4V TGCA 9 cut(s) 142, 283, 431, 1056, 1307, 1348, 1361, 1460, 1498
HpyF3I CTNAG 2 cut(s) 74, 822
HpySE526I ACGT 6 cut(s) 683, 719, 746, 947, 1000, 1444
Hsp92I GRCGYC 3 cut(s) 683, 719, 1000
Hsp92II CATG 5 cut(s) 109, 1141, 1153, 1246, 1294
HspAI GCGC 3 cut(s) 339, 804, 1415
KpnI GGTACC 1 cut(s) 1157
KspI CCGCGG 1 cut(s) 833
Kzo9I GATC 7 cut(s) 102, 844, 941, 959, 1366, 1399, 1462
LmnI GCTCC 4 cut(s) 109, 480, 551, 785
Lsp1109I GCAGC 8 cut(s) 99, 664, 700, 955, 1291, 1313, 1360, 1408
LweI GCATC 4 cut(s) 129, 1133, 1248, 1485
MaeI CTAG 5 cut(s) 519, 618, 1277, 1320, 1536
MaeII ACGT 6 cut(s) 683, 719, 746, 947, 1000, 1444
MaeIII GTNAC 3 cut(s) 183, 664, 1116
MalI GATC 7 cut(s) 104, 846, 943, 961, 1368, 1401, 1464
MboI GATC 7 cut(s) 102, 844, 941, 959, 1366, 1399, 1462
MboII GAAGA 2 cut(s) 233, 299
MfeI CAATTG 1 cut(s) 1092
MflI RGATCY 2 cut(s) 959, 1462
MhlI GDGCHC 2 cut(s) 477, 639
MluCI AATT 3 cut(s) 45, 1092, 1453
MlyI GAGTC 2 cut(s) 575, 578
MslI CAYNNNNRTG 1 cut(s) 1226
MspA1I CMGCKG 4 cut(s) 274, 601, 832, 1304
MspI CCGG 5 cut(s) 412, 633, 672, 774, 1249
MspR9I CCNGG 4 cut(s) 634, 774, 1170, 1249
MunI CAATTG 1 cut(s) 1092
MvaI CCWGG 1 cut(s) 1170
MvnI CGCG 2 cut(s) 832, 1415
NciI CCSGG 3 cut(s) 634, 774, 1249
NcoI CCATGG 1 cut(s) 1137
NdeI CATATG 1 cut(s) 1344
NdeII GATC 7 cut(s) 102, 844, 941, 959, 1366, 1399, 1462
NheI GCTAGC 1 cut(s) 1276
NlaIII CATG 5 cut(s) 109, 1141, 1153, 1246, 1294
NlaIV GGNNCC 6 cut(s) 192, 537, 781, 1155, 1317, 1325
NmeAIII GCCGAG 4 cut(s) 486, 832, 895, 997
NmuCI GTSAC 2 cut(s) 183, 664
PaeR7I CTCGAG 1 cut(s) 936
PceI AGGCCT 1 cut(s) 160
PcsI WCGNNNNNNNCGW 1 cut(s) 764
PfeI GAWTC 6 cut(s) 4, 359, 451, 629, 911, 1516
PflFI GACNNNGTC 1 cut(s) 766
PleI GAGTC 2 cut(s) 574, 578
PpsI GAGTC 2 cut(s) 574, 578
Ppu21I YACGTR 1 cut(s) 1445
PpuMI RGGWCCY 1 cut(s) 1316
Psp124BI GAGCTC 1 cut(s) 477
Psp5II RGGWCCY 1 cut(s) 1316
Psp6I CCWGG 1 cut(s) 1168
PspFI CCCAGC 2 cut(s) 1488, 1530
PspGI CCWGG 1 cut(s) 1168
PspN4I GGNNCC 6 cut(s) 192, 537, 781, 1155, 1317, 1325
PspPI GGNCC 6 cut(s) 190, 468, 607, 976, 1316, 1528
PspPPI RGGWCCY 1 cut(s) 1316
PspXI VCTCGAGB 1 cut(s) 936
PstNI CAGNNNCTG 1 cut(s) 1304
PsuI RGATCY 2 cut(s) 959, 1462
PsyI GACNNNGTC 1 cut(s) 766
PvuII CAGCTG 2 cut(s) 274, 1304
RsaI GTAC 4 cut(s) 314, 1100, 1125, 1155
RsaNI GTAC 4 cut(s) 313, 1099, 1124, 1154
RseI CAYNNNNRTG 1 cut(s) 1226
SacI GAGCTC 1 cut(s) 477
SacII CCGCGG 1 cut(s) 833
SalI GTCGAC 2 cut(s) 323, 568
Sau3AI GATC 7 cut(s) 102, 844, 941, 959, 1366, 1399, 1462
Sau96I GGNCC 6 cut(s) 190, 468, 607, 976, 1316, 1528
ScaI AGTACT 1 cut(s) 1100
SchI GAGTC 2 cut(s) 575, 578
ScrFI CCNGG 4 cut(s) 634, 774, 1170, 1249
SduI GDGCHC 2 cut(s) 477, 639
SfaNI GCATC 4 cut(s) 129, 1133, 1248, 1485
SfcI CTRYAG 1 cut(s) 1508
Sfr274I CTCGAG 1 cut(s) 936
Sfr303I CCGCGG 1 cut(s) 833
SgrBI CCGCGG 1 cut(s) 833
SgrDI CGTCGACG 1 cut(s) 323
SinI GGWCC 3 cut(s) 468, 976, 1316
SlaI CTCGAG 1 cut(s) 936
SmiMI CAYNNNNRTG 1 cut(s) 1226
SmlI CTYRAG 1 cut(s) 936
SmoI CTYRAG 1 cut(s) 936
Sse9I AATT 3 cut(s) 45, 1092, 1453
SseBI AGGCCT 1 cut(s) 160
SspMI CTAG 5 cut(s) 519, 618, 1277, 1320, 1536
SstI GAGCTC 1 cut(s) 477
StuI AGGCCT 1 cut(s) 160
StyD4I CCNGG 4 cut(s) 632, 772, 1168, 1247
StyI CCWWGG 2 cut(s) 1137, 1319
TaaI ACNGT 4 cut(s) 370, 540, 577, 697
TaiI ACGT 6 cut(s) 686, 722, 749, 950, 1003, 1447
TaqI TCGA 5 cut(s) 324, 569, 639, 937, 1003
TaqII GACCGA 1 cut(s) 485
TasI AATT 3 cut(s) 45, 1092, 1453
TatI WGTACW 2 cut(s) 1098, 1123
TfiI GAWTC 6 cut(s) 4, 359, 451, 629, 911, 1516
TscAI CASTG 1 cut(s) 790
TseFI GTSAC 2 cut(s) 183, 664
TseI GCWGC 8 cut(s) 112, 677, 713, 968, 1301, 1304, 1348, 1421
Tsp45I GTSAC 2 cut(s) 183, 664
TspDTI ATGAA 8 cut(s) 17, 362, 443, 1032, 1040, 1101, 1275, 1331
TspGWI ACGGA 1 cut(s) 936
TspRI CASTG 1 cut(s) 790
Tth111I GACNNNGTC 1 cut(s) 766
VpaK11BI GGWCC 3 cut(s) 468, 976, 1316
XagI CCTNNNNNAGG 1 cut(s) 1587
XapI RAATTY 1 cut(s) 1453
XhoI CTCGAG 1 cut(s) 936
XmaJI CCTAGG 1 cut(s) 1319
XmiI GTMKAC 3 cut(s) 324, 569, 950
XspI CTAG 5 cut(s) 519, 618, 1277, 1320, 1536
ZraI GACGTC 3 cut(s) 684, 720, 1001
ZrmI AGTACT 1 cut(s) 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.