Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000284.1

Orthogroup ID

OG0001638

Physical Location & Seq

Genomic Coordinates Forward (+)

2699 .. 5932

Gene Structure 3234 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000284.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

atgaattaccgcgtccccgaattcgaaatggagggagattactcacttccggcctcttctcctcgctcgagaaaatccaccatgccagaagatgaggtcatggaactgctatggcagaacggacaggtggtgatgcagagccaaacccagaggtcgggacataagaagtccaaatacgacgctgttattcccgaacataccagacctcctgcagcgcaaccgccgccggtgaatcaatatcaaaacccgcagctgtttatgcaggaagacgaaatggccgcctggctacagtgccctctcggcgacgacgatcctttctgcgccgaacttctttataccgattccagaaatgctcaatccagcaacaccgccgccaaccttccaccgatttctccgccgccgccgcctccccctcggctgccgatccatcctccgccgccggcgcccaggaggaccgagctcccgaacttcctccacttctccaggatgaccaacaacaataagtctcggtatgaatccgcggcggtggggccgtcggggtcgaagagcgtggattcgagcaacaccgccgccaaccttccaccgatttctccgccgccgccgccgcctccccctcggctgccgatccatcctccgccgccggcgcccaggaggaccgagctcccgaacttcctccacttctccaggatgaccaacaacaataagtctcggtatgaatccgcggcggtggggccgtcggggtcgaagagcgtggattcgaggttcgacgcctccagcaacaatgctagcggcggaggaagaggacttgccgccaccgctacgatgtcgttcggtgcagccgtctcagccgggaaagacgccgtgacgtgcgagacgtcgctgacgtcgtctaccggagactccagcgcgagtggcagcctaagcgccgagcagatgtcgattcagaagccgccgccgcctccgcctcctccgctgccggtggaggatcggaagcgcaaagagagagtggccgacgacgccgagtgtcagagcgagctggaggtggtgacgtgggacggacccgtcacttcagttctaagccgtacacgtgtcgtcggcgatgaaagggaagatgtggagtttgaatctgggagtggaaagaagcagacccggggatcgagttctactaagagatcacgagctgcggaggtccacaatctctccgaaaggagacgtcgagataggatcaatgagaagatgaggtctttgcaagaattaatacctcgttgcaataagtcggacaaagcgtcaatgctggatgaagcgattgagtatttgaaatcacttcagttgcaagtacagatgatgtccatgggatgcggcatggtccctatgatgtttcctggtgttcagcggtatatgccgatgggaatgggaatgggaatgggaatgggcatgggcatgggcatgggcatggaaatgggaatgagtcggcctatgatgccatttccgaatgtgttagctggttccaccatgccaacagcacctgcaacagctcatatgggaccgaggttgcctttgccaccatttcgaatgcagactatgcttcccaatgatcctagcagagtccaagcaacaaatcagtctgaacatatgttaaactcgcttgggacacaaaatcagaaccaatcacgagtaacaaattttgcggatccttaccagcagtacttcactccccagcaaatgcggatgcaactacagcagaatcaagccatgcctcagccaagttctagcaagccgagttccagtatgggacctgcaaatcaagagagtcatcaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006725 GO:0006778 GO:0006779 GO:0006783 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009959 GO:0009987 GO:0010017 GO:0010029 GO:0010033 GO:0010099 GO:0010100 GO:0010114 GO:0010161 GO:0010187 GO:0010313 GO:0010468 GO:0010476 GO:0010556 GO:0015994 GO:0015995 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042168 GO:0042221 GO:0042440 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044464 GO:0046148 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051186 GO:0051188 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071495 GO:0071704 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1900140 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000030 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

HLH

Protein Analysis

606

Amino Acids

66.34

Weight (kDa)

8.43

Isoelectric Point (pI)

69.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT2G20180 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28790 AT4G28800 AT4G28800 AT4G28811 AT4G28815 AT4G28815
fragaria_vesca	FvH4_2g19790 FvH4_2g19790 FvH4_2g19790 FvH4_2g19790 FvH4_2g19790 FvH4_2g19790 FvH4_2g19790
malus_domestica	MD05G1182300.v1.1 MD10G1170600.v1.1
prunus_persica	Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1 Prupe.8G209100_v2.0.a1
pyrus_communis	pycom10g14700
rosa_chinensis	RchiOBHm_Chr6g0285491
rosa_laevigata	RLG00000012635
rosa_multiflora	Rmu_sc0000284.1_g000001
rosa_roxburghii	Rroxscaffold_7G00183100
rosa_rugosa	Rorug06G0174800 Rorug06G0174800 Rorug06G0174900
rosa_samantha	Rh6AG286500 Rh6BG287700 Rh6CG288800 Rh6DG281600
rosa_wichuraiana	Rw6G024610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1534
AasI	GACNNNNNNGTC	1 cut(s)	1061
AatII	GACGTC	3 cut(s)	878, 887, 1216
Acc36I	ACCTGC	2 cut(s)	1534, 1804
AccB1I	GGYRCC	2 cut(s)	442, 643
AccI	GTMKAC	1 cut(s)	890
AccII	CGCG	4 cut(s)	12, 521, 722, 908
AclWI	GGATC	9 cut(s)	305, 418, 619, 993, 1162, 1232, 1589, 1685, 1698
AcoI	YGGCCR	2 cut(s)	276, 1008
AcsI	RAATTY	2 cut(s)	20, 1681
AcuI	CTGAAG	2 cut(s)	1053, 1310
AcvI	CACGTG	1 cut(s)	1088
AcyI	GRCGYC	8 cut(s)	443, 644, 768, 858, 875, 884, 1017, 1213
AfaI	GTAC	3 cut(s)	1084, 1338, 1706
AfiI	CCNNNNNNNGG	1 cut(s)	154
AflIII	ACRYGT	2 cut(s)	1085, 1087
AgsI	TTSAA	2 cut(s)	1124, 1318
AhdI	GACNNNNNGTC	1 cut(s)	1285
AjiI	CACGTC	2 cut(s)	867, 1050
AjnI	CCWGG	6 cut(s)	281, 446, 482, 647, 683, 1381
AloI	GAACNNNNNNTCC	2 cut(s)	746, 778
AluBI	AGCT	7 cut(s)	253, 460, 661, 1036, 1181, 1502, 1535
AluI	AGCT	7 cut(s)	253, 460, 661, 1036, 1181, 1502, 1535
Alw21I	GWGCWC	2 cut(s)	462, 663
Alw26I	GTCTC	6 cut(s)	510, 711, 847, 866, 891, 1204
AlwI	GGATC	9 cut(s)	305, 418, 619, 993, 1162, 1232, 1589, 1685, 1698
AlwNI	CAGNNNCTG	1 cut(s)	1526
Ama87I	CYCGRG	2 cut(s)	67, 1149
AoxI	GGCC	6 cut(s)	51, 276, 530, 731, 1008, 1472
ApeKI	GCWGC	8 cut(s)	212, 250, 418, 619, 836, 915, 973, 1181
ApoI	RAATTY	2 cut(s)	20, 1681
AseI	ATTAAT	1 cut(s)	1256
AspLEI	GCGC	7 cut(s)	217, 323, 445, 646, 908, 926, 996
AspS9I	GGNCC	9 cut(s)	453, 530, 654, 731, 1058, 1189, 1366, 1544, 1793
AsuC2I	CCSGG	3 cut(s)	850, 1150, 1151
AsuHPI	GGTGA	3 cut(s)	142, 241, 1057
AsuII	TTCGAA	2 cut(s)	24, 1570
AsuNHI	GCTAGC	1 cut(s)	785
AvaI	CYCGRG	2 cut(s)	67, 1149
AvaII	GGWCC	7 cut(s)	453, 654, 1058, 1189, 1366, 1544, 1793
BaeGI	GKGCMC	1 cut(s)	296
BamHI	GGATCC	1 cut(s)	1690
BanI	GGYRCC	2 cut(s)	442, 643
BanII	GRGCYC	2 cut(s)	462, 663
BarI	GAAGNNNNNNTAC	2 cut(s)	158, 190
BauI	CACGAG	2 cut(s)	1176, 1671
BbrPI	CACGTG	1 cut(s)	1088
BbsI	GAAGAC	1 cut(s)	273
Bbv12I	GWGCWC	2 cut(s)	462, 663
BbvCI	CCTCAGC	1 cut(s)	1758
BbvI	GCAGC	8 cut(s)	224, 262, 405, 606, 848, 927, 960, 1168
BccI	CCATC	3 cut(s)	435, 636, 1399
BceAI	ACGGC	5 cut(s)	517, 718, 824, 845, 1065
BciT130I	CCWGG	6 cut(s)	283, 448, 484, 649, 685, 1383
BcnI	CCSGG	3 cut(s)	850, 1150, 1151
BcoDI	GTCTC	6 cut(s)	510, 711, 847, 866, 891, 1204
BfaI	CTAG	3 cut(s)	786, 1599, 1770
BfmI	CTRYAG	3 cut(s)	210, 287, 1736
BfoI	RGCGCY	3 cut(s)	446, 647, 927
BfuAI	ACCTGC	2 cut(s)	1534, 1804
BglI	GCCNNNNNGGC	1 cut(s)	300
BmcAI	AGTACT	1 cut(s)	1706
Bme1390I	CCNGG	9 cut(s)	283, 448, 484, 649, 685, 850, 1150, 1151, 1383
Bme18I	GGWCC	7 cut(s)	453, 654, 1058, 1189, 1366, 1544, 1793
BmeRI	GACNNNNNGTC	1 cut(s)	1285
BmeT110I	CYCGRG	2 cut(s)	67, 1149
BmgBI	CACGTC	2 cut(s)	867, 1050
BmgT120I	GGNCC	9 cut(s)	453, 530, 654, 731, 1058, 1189, 1366, 1544, 1793
BmrFI	CCNGG	9 cut(s)	283, 448, 484, 649, 685, 850, 1150, 1151, 1383
BmsI	GCATC	4 cut(s)	123, 1346, 1470, 1719
BmtI	GCTAGC	1 cut(s)	789
BpiI	GAAGAC	1 cut(s)	273
BpmI	CTGGAG	5 cut(s)	466, 667, 757, 886, 1058
Bpu10I	CCTNAGC	2 cut(s)	920, 1758
Bpu14I	TTCGAA	2 cut(s)	24, 1570
BpuMI	CCSGG	3 cut(s)	850, 1150, 1151
BsaAI	YACGTR	1 cut(s)	1088
BsaHI	GRCGYC	8 cut(s)	443, 644, 768, 858, 875, 884, 1017, 1213
BsaWI	WCCGGW	1 cut(s)	893
BsaXI	ACNNNNNCTCC	4 cut(s)	190, 220, 1184, 1214
Bsc4I	CCNNNNNNNGG	1 cut(s)	154
Bse118I	RCCGGY	4 cut(s)	226, 439, 640, 976
Bse1I	ACTGG	1 cut(s)	1785
BseBI	CCWGG	6 cut(s)	283, 448, 484, 649, 685, 1383
BseGI	GGATG	7 cut(s)	427, 492, 628, 693, 1303, 1361, 1734
BseLI	CCNNNNNNNGG	1 cut(s)	154
BseMII	CTCAG	2 cut(s)	858, 1772
BseNI	ACTGG	1 cut(s)	1785
BseRI	GAGGAG	2 cut(s)	51, 957
BseSI	GKGCMC	1 cut(s)	296
BseXI	GCAGC	8 cut(s)	224, 262, 405, 606, 848, 927, 960, 1168
BseYI	CCCAGC	1 cut(s)	1716
BsgI	GTGCAG	1 cut(s)	855
Bsh1236I	CGCG	4 cut(s)	12, 521, 722, 908
BshFI	GGCC	6 cut(s)	53, 278, 532, 733, 1010, 1474
BshNI	GGYRCC	2 cut(s)	442, 643
BsiHKAI	GWGCWC	2 cut(s)	462, 663
BsiHKCI	CYCGRG	2 cut(s)	67, 1149
BsiSI	CCGG	8 cut(s)	50, 227, 440, 641, 849, 894, 977, 1150
BslFI	GGGAC	6 cut(s)	171, 1067, 1352, 1557, 1663, 1806
BslI	CCNNNNNNNGG	1 cut(s)	154
BsmAI	GTCTC	6 cut(s)	510, 711, 847, 866, 891, 1204
BsmBI	CGTCTC	3 cut(s)	847, 866, 1204
BsmFI	GGGAC	6 cut(s)	171, 1067, 1352, 1557, 1663, 1806
BsmI	GAATGC	1 cut(s)	1578
BsnI	GGCC	6 cut(s)	53, 278, 532, 733, 1010, 1474
BsoBI	CYCGRG	2 cut(s)	67, 1149
Bsp119I	TTCGAA	2 cut(s)	24, 1570
Bsp1286I	GDGCHC	3 cut(s)	296, 462, 663
Bsp143I	GATC	9 cut(s)	310, 423, 624, 985, 1154, 1172, 1224, 1594, 1690
Bsp19I	CCATGG	1 cut(s)	1350
BspANI	GGCC	6 cut(s)	53, 278, 532, 733, 1010, 1474
BspCNI	CTCAG	2 cut(s)	857, 1771
BspFNI	CGCG	4 cut(s)	12, 521, 722, 908
BspMAI	CTGCAG	1 cut(s)	214
BspMI	ACCTGC	2 cut(s)	1534, 1804
BspOI	GCTAGC	1 cut(s)	789
BspPI	GGATC	9 cut(s)	305, 418, 619, 993, 1162, 1232, 1589, 1685, 1698
BspQI	GCTCTTC	2 cut(s)	539, 740
BspT104I	TTCGAA	2 cut(s)	24, 1570
BspT107I	GGYRCC	2 cut(s)	442, 643
BsrFI	RCCGGY	4 cut(s)	226, 439, 640, 976
BsrI	ACTGG	1 cut(s)	1785
BssAI	RCCGGY	4 cut(s)	226, 439, 640, 976
BssMI	GATC	9 cut(s)	310, 423, 624, 985, 1154, 1172, 1224, 1594, 1690
BssNI	GRCGYC	8 cut(s)	443, 644, 768, 858, 875, 884, 1017, 1213
BssSI	CACGAG	2 cut(s)	1176, 1671
BssT1I	CCWWGG	1 cut(s)	1350
Bst2BI	CACGAG	2 cut(s)	1176, 1671
Bst2UI	CCWGG	6 cut(s)	283, 448, 484, 649, 685, 1383
Bst4CI	ACNGT	1 cut(s)	291
Bst6I	CTCTTC	4 cut(s)	61, 539, 740, 793
BstACI	GRCGYC	8 cut(s)	443, 644, 768, 858, 875, 884, 1017, 1213
BstAPI	GCANNNNNTGC	1 cut(s)	1582
BstBAI	YACGTR	1 cut(s)	1088
BstBI	TTCGAA	2 cut(s)	24, 1570
BstC8I	GCNNGC	5 cut(s)	441, 642, 787, 1034, 1775
BstDEI	CTNAG	5 cut(s)	844, 920, 1076, 1167, 1758
BstDSI	CCRYGG	3 cut(s)	519, 720, 1350
BstF5I	GGATG	7 cut(s)	427, 492, 628, 693, 1303, 1361, 1734
BstFNI	CGCG	4 cut(s)	12, 521, 722, 908
BstH2I	RGCGCY	3 cut(s)	446, 647, 927
BstHHI	GCGC	7 cut(s)	217, 323, 445, 646, 908, 926, 996
BstKTI	GATC	9 cut(s)	313, 426, 627, 988, 1157, 1175, 1227, 1597, 1693
BstMAI	GTCTC	6 cut(s)	510, 711, 847, 866, 891, 1204
BstMBI	GATC	9 cut(s)	310, 423, 624, 985, 1154, 1172, 1224, 1594, 1690
BstNI	CCWGG	6 cut(s)	283, 448, 484, 649, 685, 1383
BstSCI	CCNGG	9 cut(s)	281, 446, 482, 647, 683, 848, 1148, 1149, 1381
BstSFI	CTRYAG	3 cut(s)	210, 287, 1736
BstSLI	GKGCMC	1 cut(s)	296
BstUI	CGCG	4 cut(s)	12, 521, 722, 908
BstV1I	GCAGC	8 cut(s)	224, 262, 405, 606, 848, 927, 960, 1168
BstV2I	GAAGAC	1 cut(s)	273
BstX2I	RGATCY	1 cut(s)	1690
BstYI	RGATCY	1 cut(s)	1690
BsuRI	GGCC	6 cut(s)	53, 278, 532, 733, 1010, 1474
BtgI	CCRYGG	3 cut(s)	519, 720, 1350
BtgZI	GCGATG	1 cut(s)	1113
BtrI	CACGTC	2 cut(s)	867, 1050
BtsCI	GGATG	7 cut(s)	427, 492, 628, 693, 1303, 1361, 1734
BtsIMutI	CAGTG	1 cut(s)	296
BveI	ACCTGC	2 cut(s)	1534, 1804
Cac8I	GCNNGC	5 cut(s)	441, 642, 787, 1034, 1775
CaiI	CAGNNNCTG	1 cut(s)	1526
CfoI	GCGC	7 cut(s)	217, 323, 445, 646, 908, 926, 996
Cfr10I	RCCGGY	4 cut(s)	226, 439, 640, 976
Cfr13I	GGNCC	9 cut(s)	453, 530, 654, 731, 1058, 1189, 1366, 1544, 1793
Cfr42I	CCGCGG	2 cut(s)	522, 723
Cfr9I	CCCGGG	1 cut(s)	1149
CseI	GACGC	5 cut(s)	188, 776, 866, 1025, 1275
Csp6I	GTAC	3 cut(s)	1083, 1337, 1705
CviQI	GTAC	3 cut(s)	1083, 1337, 1705
DdeI	CTNAG	5 cut(s)	844, 920, 1076, 1167, 1758
DinI	GGCGCC	2 cut(s)	444, 645
DpnI	GATC	9 cut(s)	312, 425, 626, 987, 1156, 1174, 1226, 1596, 1692
DpnII	GATC	9 cut(s)	310, 423, 624, 985, 1154, 1172, 1224, 1594, 1690
DrdI	GACNNNNNNGTC	1 cut(s)	1061
DriI	GACNNNNNGTC	1 cut(s)	1285
DseDI	GACNNNNNNGTC	1 cut(s)	1061
EaeI	YGGCCR	2 cut(s)	276, 1008
Eam1104I	CTCTTC	4 cut(s)	61, 539, 740, 793
Eam1105I	GACNNNNNGTC	1 cut(s)	1285
EarI	CTCTTC	4 cut(s)	61, 539, 740, 793
EciI	GGCGGA	6 cut(s)	384, 423, 582, 624, 807, 951
Ecl136II	GAGCTC	2 cut(s)	460, 661
Eco130I	CCWWGG	1 cut(s)	1350
Eco24I	GRGCYC	2 cut(s)	462, 663
Eco47I	GGWCC	7 cut(s)	453, 654, 1058, 1189, 1366, 1544, 1793
Eco53kI	GAGCTC	2 cut(s)	460, 661
Eco57I	CTGAAG	2 cut(s)	1053, 1310
Eco72I	CACGTG	1 cut(s)	1088
Eco88I	CYCGRG	2 cut(s)	67, 1149
EcoICRI	GAGCTC	2 cut(s)	460, 661
EcoO109I	RGGNCCY	1 cut(s)	1793
EcoRI	GAATTC	1 cut(s)	20
EcoRII	CCWGG	6 cut(s)	281, 446, 482, 647, 683, 1381
EcoT14I	CCWWGG	1 cut(s)	1350
EcoT38I	GRGCYC	2 cut(s)	462, 663
EgeI	GGCGCC	2 cut(s)	444, 645
EheI	GGCGCC	2 cut(s)	444, 645
ErhI	CCWWGG	1 cut(s)	1350
Esp3I	CGTCTC	3 cut(s)	847, 866, 1204
FaqI	GGGAC	6 cut(s)	171, 1067, 1352, 1557, 1663, 1806
FauI	CCCGC	1 cut(s)	255
FauNDI	CATATG	2 cut(s)	1539, 1632
FblI	GTMKAC	1 cut(s)	890
FokI	GGATG	7 cut(s)	414, 499, 615, 700, 1310, 1368, 1741
FriOI	GRGCYC	2 cut(s)	462, 663
FspBI	CTAG	3 cut(s)	786, 1599, 1770
GlaI	GCGC	7 cut(s)	216, 322, 444, 645, 907, 925, 995
GsaI	CCCAGC	1 cut(s)	1720
GsuI	CTGGAG	5 cut(s)	466, 667, 757, 886, 1058
HaeII	RGCGCY	3 cut(s)	446, 647, 927
HaeIII	GGCC	6 cut(s)	53, 278, 532, 733, 1010, 1474
HapII	CCGG	8 cut(s)	50, 227, 440, 641, 849, 894, 977, 1150
HgaI	GACGC	5 cut(s)	188, 776, 866, 1025, 1275
HhaI	GCGC	7 cut(s)	217, 323, 445, 646, 908, 926, 996
Hin1I	GRCGYC	8 cut(s)	443, 644, 768, 858, 875, 884, 1017, 1213
Hin6I	GCGC	7 cut(s)	215, 321, 443, 644, 906, 924, 994
HinP1I	GCGC	7 cut(s)	215, 321, 443, 644, 906, 924, 994
HpaII	CCGG	8 cut(s)	50, 227, 440, 641, 849, 894, 977, 1150
HphI	GGTGA	3 cut(s)	142, 241, 1057
Hpy166II	GTNNAC	3 cut(s)	891, 1085, 1192
Hpy188I	TCNGA	8 cut(s)	945, 990, 1029, 1204, 1279, 1491, 1627, 1662
Hpy8I	GTNNAC	3 cut(s)	891, 1085, 1192
HpyAV	CCTTC	2 cut(s)	389, 587
HpyCH4III	ACNGT	1 cut(s)	291
HpyCH4IV	ACGT	6 cut(s)	866, 875, 884, 1049, 1087, 1213
HpyF3I	CTNAG	5 cut(s)	844, 920, 1076, 1167, 1758
HpySE526I	ACGT	6 cut(s)	866, 875, 884, 1049, 1087, 1213
Hsp92I	GRCGYC	8 cut(s)	443, 644, 768, 858, 875, 884, 1017, 1213
HspAI	GCGC	7 cut(s)	215, 321, 443, 644, 906, 924, 994
KasI	GGCGCC	2 cut(s)	442, 643
KroI	GCCGGC	2 cut(s)	439, 640
KroNI	GCCGGC	2 cut(s)	441, 642
KspI	CCGCGG	2 cut(s)	522, 723
Kzo9I	GATC	9 cut(s)	310, 423, 624, 985, 1154, 1172, 1224, 1594, 1690
LguI	GCTCTTC	2 cut(s)	539, 740
LmnI	GCTCC	2 cut(s)	465, 666
Lsp1109I	GCAGC	8 cut(s)	224, 262, 405, 606, 848, 927, 960, 1168
LweI	GCATC	4 cut(s)	123, 1346, 1470, 1719
MaeI	CTAG	3 cut(s)	786, 1599, 1770
MaeII	ACGT	6 cut(s)	866, 875, 884, 1049, 1087, 1213
MaeIII	GTNAC	4 cut(s)	862, 1045, 1063, 1675
MalI	GATC	9 cut(s)	312, 425, 626, 987, 1156, 1174, 1226, 1596, 1692
MboI	GATC	9 cut(s)	310, 423, 624, 985, 1154, 1172, 1224, 1594, 1690
MboII	GAAGA	8 cut(s)	48, 101, 278, 556, 757, 810, 1121, 1246
MflI	RGATCY	1 cut(s)	1690
MhlI	GDGCHC	3 cut(s)	296, 462, 663
MluCI	AATT	4 cut(s)	4, 20, 1253, 1681
Mly113I	GGCGCC	2 cut(s)	443, 644
MlyI	GAGTC	4 cut(s)	893, 1477, 1614, 1819
MmeI	TCCRAC	1 cut(s)	1257
MreI	CGCCGGCG	2 cut(s)	439, 640
MroNI	GCCGGC	2 cut(s)	439, 640
MseI	TTAA	2 cut(s)	1256, 1637
MslI	CAYNNNNRTG	4 cut(s)	1439, 1445, 1451, 1457
MspA1I	CMGCKG	5 cut(s)	253, 521, 722, 973, 1393
MspI	CCGG	8 cut(s)	50, 227, 440, 641, 849, 894, 977, 1150
MspR9I	CCNGG	9 cut(s)	283, 448, 484, 649, 685, 850, 1150, 1151, 1383
Mva1269I	GAATGC	1 cut(s)	1578
MvaI	CCWGG	6 cut(s)	283, 448, 484, 649, 685, 1383
MvnI	CGCG	4 cut(s)	12, 521, 722, 908
NaeI	GCCGGC	2 cut(s)	441, 642
NarI	GGCGCC	2 cut(s)	443, 644
NciI	CCSGG	3 cut(s)	850, 1150, 1151
NcoI	CCATGG	1 cut(s)	1350
NdeI	CATATG	2 cut(s)	1539, 1632
NdeII	GATC	9 cut(s)	310, 423, 624, 985, 1154, 1172, 1224, 1594, 1690
NgoMIV	GCCGGC	2 cut(s)	439, 640
NheI	GCTAGC	1 cut(s)	785
NmeAIII	GCCGAG	6 cut(s)	279, 394, 595, 952, 1045, 1803
NmuCI	GTSAC	3 cut(s)	862, 1045, 1063
NspV	TTCGAA	2 cut(s)	24, 1570
PaeR7I	CTCGAG	1 cut(s)	67
PaqCI	CACCTGC	1 cut(s)	1534
PciSI	GCTCTTC	2 cut(s)	539, 740
PcsI	WCGNNNNNNNCGW	6 cut(s)	306, 837, 872, 881, 884, 1283
PctI	GAATGC	1 cut(s)	1578
PdiI	GCCGGC	2 cut(s)	441, 642
PfeI	GAWTC	9 cut(s)	232, 341, 515, 554, 716, 755, 940, 1124, 1744
PflFI	GACNNNGTC	1 cut(s)	886
PfoI	TCCNGGA	2 cut(s)	482, 683
PleI	GAGTC	4 cut(s)	893, 1476, 1613, 1818
PluTI	GGCGCC	2 cut(s)	446, 647
PmaCI	CACGTG	1 cut(s)	1088
PmlI	CACGTG	1 cut(s)	1088
PpsI	GAGTC	4 cut(s)	893, 1476, 1613, 1818
Ppu21I	YACGTR	1 cut(s)	1088
PpuMI	RGGWCCY	1 cut(s)	1793
PshBI	ATTAAT	1 cut(s)	1256
Psp124BI	GAGCTC	2 cut(s)	462, 663
Psp5II	RGGWCCY	1 cut(s)	1793
Psp6I	CCWGG	6 cut(s)	281, 446, 482, 647, 683, 1381
PspCI	CACGTG	1 cut(s)	1088
PspFI	CCCAGC	1 cut(s)	1716
PspGI	CCWGG	6 cut(s)	281, 446, 482, 647, 683, 1381
PspPI	GGNCC	9 cut(s)	453, 530, 654, 731, 1058, 1189, 1366, 1544, 1793
PspPPI	RGGWCCY	1 cut(s)	1793
PstI	CTGCAG	1 cut(s)	214
PstNI	CAGNNNCTG	1 cut(s)	1526
PsuI	RGATCY	1 cut(s)	1690
PsyI	GACNNNGTC	1 cut(s)	886
PvuII	CAGCTG	1 cut(s)	253
RsaI	GTAC	3 cut(s)	1084, 1338, 1706
RsaNI	GTAC	3 cut(s)	1083, 1337, 1705
RseI	CAYNNNNRTG	4 cut(s)	1439, 1445, 1451, 1457
SacI	GAGCTC	2 cut(s)	462, 663
SacII	CCGCGG	2 cut(s)	522, 723
SapI	GCTCTTC	2 cut(s)	539, 740
SaqAI	TTAA	2 cut(s)	1256, 1637
Sau3AI	GATC	9 cut(s)	310, 423, 624, 985, 1154, 1172, 1224, 1594, 1690
Sau96I	GGNCC	9 cut(s)	453, 530, 654, 731, 1058, 1189, 1366, 1544, 1793
ScaI	AGTACT	1 cut(s)	1706
SchI	GAGTC	4 cut(s)	893, 1477, 1614, 1819
ScrFI	CCNGG	9 cut(s)	283, 448, 484, 649, 685, 850, 1150, 1151, 1383
SduI	GDGCHC	3 cut(s)	296, 462, 663
SfaNI	GCATC	4 cut(s)	123, 1346, 1470, 1719
SfcI	CTRYAG	3 cut(s)	210, 287, 1736
SfoI	GGCGCC	2 cut(s)	444, 645
Sfr274I	CTCGAG	1 cut(s)	67
Sfr303I	CCGCGG	2 cut(s)	522, 723
SfuI	TTCGAA	2 cut(s)	24, 1570
SgrAI	CRCCGGYG	3 cut(s)	226, 439, 640
SgrBI	CCGCGG	2 cut(s)	522, 723
SinI	GGWCC	7 cut(s)	453, 654, 1058, 1189, 1366, 1544, 1793
SlaI	CTCGAG	1 cut(s)	67
SmaI	CCCGGG	1 cut(s)	1151
SmiMI	CAYNNNNRTG	4 cut(s)	1439, 1445, 1451, 1457
SmlI	CTYRAG	1 cut(s)	67
SmoI	CTYRAG	1 cut(s)	67
Sse9I	AATT	4 cut(s)	4, 20, 1253, 1681
SspDI	GGCGCC	2 cut(s)	442, 643
SspMI	CTAG	3 cut(s)	786, 1599, 1770
SstI	GAGCTC	2 cut(s)	462, 663
StyD4I	CCNGG	9 cut(s)	281, 446, 482, 647, 683, 848, 1148, 1149, 1381
StyI	CCWWGG	1 cut(s)	1350
TaaI	ACNGT	1 cut(s)	291
TaiI	ACGT	6 cut(s)	869, 878, 887, 1052, 1090, 1216
TaqII	GACCGA	3 cut(s)	470, 671, 1561
TasI	AATT	4 cut(s)	4, 20, 1253, 1681
TatI	WGTACW	2 cut(s)	1336, 1704
TfiI	GAWTC	9 cut(s)	232, 341, 515, 554, 716, 755, 940, 1124, 1744
Tru1I	TTAA	2 cut(s)	1256, 1637
Tru9I	TTAA	2 cut(s)	1256, 1637
TscAI	CASTG	1 cut(s)	296
TseFI	GTSAC	3 cut(s)	862, 1045, 1063
TseI	GCWGC	8 cut(s)	212, 250, 418, 619, 836, 915, 973, 1181
Tsp45I	GTSAC	3 cut(s)	862, 1045, 1063
TspDTI	ATGAA	5 cut(s)	17, 528, 729, 1116, 1314
TspGWI	ACGGA	2 cut(s)	135, 1071
TspMI	CCCGGG	1 cut(s)	1149
TspRI	CASTG	1 cut(s)	296
Tth111I	GACNNNGTC	1 cut(s)	886
VpaK11BI	GGWCC	7 cut(s)	453, 654, 1058, 1189, 1366, 1544, 1793
VspI	ATTAAT	1 cut(s)	1256
XapI	RAATTY	2 cut(s)	20, 1681
XhoI	CTCGAG	1 cut(s)	67
XmaI	CCCGGG	1 cut(s)	1149
XmiI	GTMKAC	1 cut(s)	890
XspI	CTAG	3 cut(s)	786, 1599, 1770
ZraI	GACGTC	3 cut(s)	876, 885, 1214
ZrmI	AGTACT	1 cut(s)	1706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.