Rw6G024610

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0001638
Physical Location & Seq
Reverse (-)
47772428 .. 47774704
2277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G024610.1

Sequence Viewer

Length: 1155 bp
ATGAATTACCGCGTCCCCGAATTCGAAATGGAGGGAGATTACTCACTTCCGGCCTCTTCTCCTCGCTCGAGAAAATCCACCATGCCAGAAGATGAGGTCATGGAACTGCTATGGCAGAACGGACAGGTGGTGATGCAGAGCCAAACCCAGAGGTCGGGACATAAGAAGTCCAAATACGACGCTGTTATTCCCGAACATACCAGACCTCCTGCAGCGCAACCGCCGCCGGTGAATCAACCTCAAAACCCGCAGCTGTTTATGCAGGAAGACGAAATGGCCGCCTGGCTACAGTGCCCTCTCGGGGACGACGATCCTTTCTGCGCCGAACTTCTTTATACCGATTCCAGAAACGCTCAATCCAGCAACACCGCCGCCAACCTTCCACCGATTTCTCCGCCGCCGCCGCCTCCCCCTCGGCTGCCGATCCATCCTCCGCCGCCGGCGCCCAGGAGGACCGAGCTCCCGAACTTCCTCCACTTCTCCAGGATGACCAACAACAATAAGTCTCGGTATGAATCCGCGGCGGTGGGGCCGTCGGGGTCGAAGAGCGTGGATTCGAGGTTCGACGCCTCCAGCAACAATGCTAGCGGCTGCGGAAGAGGACTCGCCGCCGCCGCTACGATGTCGTTCGGTGCCGCCGCCTCAGCCGGGAAAGACGCCGTGACGTGCGAGACGTCGCTGACGTCGTCTACCGGAGATTCCAGCGCGAGCGGCAGCCTAAGCGCCGAGCAGATGTCGAGTCAGAAGCCGCCGCCTCCGCCTCCTCCGCTGCCGGTGGAGGATCGGAAGCGCAAAGAGAGAGTGGCCGACGACGCCGAGTGTCAGAGCGAGGATGTGGAGTTTGAATCTGGGAGTGGAAAGAAGCAGACCCGGGGATCGAGTTCTACTAAGAGATCACGAGCTGCGGAGGTCCACAATCTCTCCGAAAGGAGACGTCGAGATAGGATCAATGAGAAGATGAGGTCTTTGCAAGAATTAATACCTCGTTGCAATAAGTCGGACAAAGCGTCAATGCTGGATGAAGCGATTGAGTATTTGAAATCACTTCAGTTGCAAGTACAGGTATGGTCTTGTTTTATTTTCATGTATCATGTAATATTCTGGGAATCGAGATTTATAACTCCCTCTTCACATGAACAATTGTTGGTCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006725 GO:0006778 GO:0006779 GO:0006783 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009959 GO:0009987 GO:0010017 GO:0010029 GO:0010033 GO:0010099 GO:0010100 GO:0010114 GO:0010161 GO:0010187 GO:0010313 GO:0010468 GO:0010476 GO:0010556 GO:0015994 GO:0015995 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0033013 GO:0033014 GO:0033993 GO:0034641 GO:0042168 GO:0042221 GO:0042440 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044464 GO:0046148 GO:0046483 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051186 GO:0051188 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071495 GO:0071704 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1900140 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000030 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
HLH

Protein Analysis

384

Amino Acids

42.47

Weight (kDa)

6.42

Isoelectric Point (pI)

74.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 303 - 350 4.4e-13 Helix-loop-helix DNA-binding domain
bHLH_SAC51 PF23173 309 - 352 1.2e-07 Transcription factor SAC51 bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1118
AatII GACGTC 3 cut(s) 677, 686, 937
AccB1I GGYRCC 2 cut(s) 442, 632
AccBSI CCGCTC 1 cut(s) 711
AccI GTMKAC 1 cut(s) 689
AccII CGCG 3 cut(s) 12, 521, 707
AclWI GGATC 5 cut(s) 305, 418, 789, 883, 953
AcoI YGGCCR 2 cut(s) 276, 804
AcsI RAATTY 1 cut(s) 20
AcuI CTGAAG 1 cut(s) 1031
AcyI GRCGYC 7 cut(s) 443, 567, 657, 674, 683, 813, 934
AfaI GTAC 1 cut(s) 1059
AfiI CCNNNNNNNGG 3 cut(s) 154, 301, 648
AgsI TTSAA 2 cut(s) 845, 1039
AhdI GACNNNNNGTC 1 cut(s) 1006
AjiI CACGTC 1 cut(s) 666
AjnI CCWGG 3 cut(s) 281, 446, 482
AloI GAACNNNNNNTCC 2 cut(s) 545, 577
AluBI AGCT 3 cut(s) 253, 460, 902
AluI AGCT 3 cut(s) 253, 460, 902
Alw21I GWGCWC 1 cut(s) 462
Alw26I GTCTC 3 cut(s) 510, 665, 925
AlwI GGATC 5 cut(s) 305, 418, 789, 883, 953
Ama87I CYCGRG 3 cut(s) 67, 299, 870
AoxI GGCC 4 cut(s) 51, 276, 530, 804
ApeKI GCWGC 7 cut(s) 212, 250, 418, 591, 714, 769, 902
ApoI RAATTY 1 cut(s) 20
AseI ATTAAT 1 cut(s) 977
AspLEI GCGC 6 cut(s) 217, 323, 445, 707, 725, 792
AspS9I GGNCC 3 cut(s) 453, 530, 910
AsuC2I CCSGG 3 cut(s) 649, 871, 872
AsuHPI GGTGA 2 cut(s) 142, 241
AsuII TTCGAA 1 cut(s) 24
AsuNHI GCTAGC 1 cut(s) 584
AvaI CYCGRG 3 cut(s) 67, 299, 870
AvaII GGWCC 2 cut(s) 453, 910
BaeGI GKGCMC 1 cut(s) 296
BanI GGYRCC 2 cut(s) 442, 632
BanII GRGCYC 1 cut(s) 462
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BauI CACGAG 1 cut(s) 897
BbsI GAAGAC 1 cut(s) 273
Bbv12I GWGCWC 1 cut(s) 462
BbvCI CCTCAGC 1 cut(s) 643
BbvI GCAGC 7 cut(s) 224, 262, 405, 578, 726, 756, 889
BccI CCATC 1 cut(s) 435
BceAI ACGGC 2 cut(s) 517, 644
BciT130I CCWGG 3 cut(s) 283, 448, 484
BcnI CCSGG 3 cut(s) 649, 871, 872
BcoDI GTCTC 3 cut(s) 510, 665, 925
BfaI CTAG 1 cut(s) 585
BfmI CTRYAG 2 cut(s) 210, 287
BfoI RGCGCY 2 cut(s) 446, 726
Bme1390I CCNGG 6 cut(s) 283, 448, 484, 649, 871, 872
Bme18I GGWCC 2 cut(s) 453, 910
BmeRI GACNNNNNGTC 1 cut(s) 1006
BmeT110I CYCGRG 3 cut(s) 67, 299, 870
BmgBI CACGTC 1 cut(s) 666
BmgT120I GGNCC 3 cut(s) 453, 530, 910
BmiI GGNNCC 3 cut(s) 444, 531, 634
BmrFI CCNGG 6 cut(s) 283, 448, 484, 649, 871, 872
BmsI GCATC 1 cut(s) 123
BmtI GCTAGC 1 cut(s) 588
BpiI GAAGAC 1 cut(s) 273
BpmI CTGGAG 2 cut(s) 466, 556
Bpu10I CCTNAGC 2 cut(s) 643, 719
Bpu14I TTCGAA 1 cut(s) 24
BpuMI CCSGG 3 cut(s) 649, 871, 872
BsaHI GRCGYC 7 cut(s) 443, 567, 657, 674, 683, 813, 934
BsaJI CCNNGG 5 cut(s) 413, 446, 519, 870, 871
BsaWI WCCGGW 1 cut(s) 692
BsaXI ACNNNNNCTCC 4 cut(s) 190, 220, 905, 935
Bsc4I CCNNNNNNNGG 3 cut(s) 154, 301, 648
Bse118I RCCGGY 3 cut(s) 226, 439, 772
BseBI CCWGG 3 cut(s) 283, 448, 484
BseDI CCNNGG 5 cut(s) 413, 446, 519, 870, 871
BseGI GGATG 4 cut(s) 427, 492, 838, 1024
BseLI CCNNNNNNNGG 3 cut(s) 154, 301, 648
BseMII CTCAG 1 cut(s) 657
BseRI GAGGAG 2 cut(s) 51, 753
BseSI GKGCMC 1 cut(s) 296
BseXI GCAGC 7 cut(s) 224, 262, 405, 578, 726, 756, 889
Bsh1236I CGCG 3 cut(s) 12, 521, 707
BshFI GGCC 4 cut(s) 53, 278, 532, 806
BshNI GGYRCC 2 cut(s) 442, 632
BsiHKAI GWGCWC 1 cut(s) 462
BsiHKCI CYCGRG 3 cut(s) 67, 299, 870
BsiSI CCGG 7 cut(s) 50, 227, 440, 648, 693, 773, 871
BslFI GGGAC 2 cut(s) 171, 317
BslI CCNNNNNNNGG 3 cut(s) 154, 301, 648
BsmAI GTCTC 3 cut(s) 510, 665, 925
BsmBI CGTCTC 2 cut(s) 665, 925
BsmFI GGGAC 2 cut(s) 171, 317
BsnI GGCC 4 cut(s) 53, 278, 532, 806
BsoBI CYCGRG 3 cut(s) 67, 299, 870
Bsp119I TTCGAA 1 cut(s) 24
Bsp1286I GDGCHC 2 cut(s) 296, 462
Bsp143I GATC 6 cut(s) 310, 423, 781, 875, 893, 945
BspANI GGCC 4 cut(s) 53, 278, 532, 806
BspCNI CTCAG 1 cut(s) 656
BspFNI CGCG 3 cut(s) 12, 521, 707
BspLI GGNNCC 3 cut(s) 444, 531, 634
BspMAI CTGCAG 1 cut(s) 214
BspOI GCTAGC 1 cut(s) 588
BspPI GGATC 5 cut(s) 305, 418, 789, 883, 953
BspQI GCTCTTC 1 cut(s) 539
BspT104I TTCGAA 1 cut(s) 24
BspT107I GGYRCC 2 cut(s) 442, 632
BsrBI CCGCTC 1 cut(s) 711
BsrFI RCCGGY 3 cut(s) 226, 439, 772
BssAI RCCGGY 3 cut(s) 226, 439, 772
BssECI CCNNGG 5 cut(s) 413, 446, 519, 870, 871
BssMI GATC 6 cut(s) 310, 423, 781, 875, 893, 945
BssNI GRCGYC 7 cut(s) 443, 567, 657, 674, 683, 813, 934
BssSI CACGAG 1 cut(s) 897
Bst2BI CACGAG 1 cut(s) 897
Bst2UI CCWGG 3 cut(s) 283, 448, 484
Bst4CI ACNGT 1 cut(s) 291
Bst6I CTCTTC 4 cut(s) 61, 539, 592, 1132
BstACI GRCGYC 7 cut(s) 443, 567, 657, 674, 683, 813, 934
BstBI TTCGAA 1 cut(s) 24
BstC8I GCNNGC 3 cut(s) 441, 586, 709
BstDEI CTNAG 3 cut(s) 643, 719, 888
BstDSI CCRYGG 1 cut(s) 519
BstF5I GGATG 4 cut(s) 427, 492, 838, 1024
BstFNI CGCG 3 cut(s) 12, 521, 707
BstH2I RGCGCY 2 cut(s) 446, 726
BstHHI GCGC 6 cut(s) 217, 323, 445, 707, 725, 792
BstKTI GATC 6 cut(s) 313, 426, 784, 878, 896, 948
BstMAI GTCTC 3 cut(s) 510, 665, 925
BstMBI GATC 6 cut(s) 310, 423, 781, 875, 893, 945
BstNI CCWGG 3 cut(s) 283, 448, 484
BstSCI CCNGG 6 cut(s) 281, 446, 482, 647, 869, 870
BstSFI CTRYAG 2 cut(s) 210, 287
BstSLI GKGCMC 1 cut(s) 296
BstUI CGCG 3 cut(s) 12, 521, 707
BstV1I GCAGC 7 cut(s) 224, 262, 405, 578, 726, 756, 889
BstV2I GAAGAC 1 cut(s) 273
BsuRI GGCC 4 cut(s) 53, 278, 532, 806
BtgI CCRYGG 1 cut(s) 519
BtrI CACGTC 1 cut(s) 666
BtsCI GGATG 4 cut(s) 427, 492, 838, 1024
BtsIMutI CAGTG 1 cut(s) 296
Cac8I GCNNGC 3 cut(s) 441, 586, 709
CfoI GCGC 6 cut(s) 217, 323, 445, 707, 725, 792
Cfr10I RCCGGY 3 cut(s) 226, 439, 772
Cfr13I GGNCC 3 cut(s) 453, 530, 910
Cfr42I CCGCGG 1 cut(s) 522
Cfr9I CCCGGG 1 cut(s) 870
CseI GACGC 5 cut(s) 188, 575, 665, 821, 996
Csp6I GTAC 1 cut(s) 1058
CviAII CATG 5 cut(s) 82, 100, 1084, 1091, 1133
CviQI GTAC 1 cut(s) 1058
DdeI CTNAG 3 cut(s) 643, 719, 888
DinI GGCGCC 1 cut(s) 444
DpnI GATC 6 cut(s) 312, 425, 783, 877, 895, 947
DpnII GATC 6 cut(s) 310, 423, 781, 875, 893, 945
DriI GACNNNNNGTC 1 cut(s) 1006
EaeI YGGCCR 2 cut(s) 276, 804
Eam1104I CTCTTC 4 cut(s) 61, 539, 592, 1132
Eam1105I GACNNNNNGTC 1 cut(s) 1006
EarI CTCTTC 4 cut(s) 61, 539, 592, 1132
EciI GGCGGA 3 cut(s) 384, 423, 747
Ecl136II GAGCTC 1 cut(s) 460
Eco24I GRGCYC 1 cut(s) 462
Eco47I GGWCC 2 cut(s) 453, 910
Eco53kI GAGCTC 1 cut(s) 460
Eco57I CTGAAG 1 cut(s) 1031
Eco88I CYCGRG 3 cut(s) 67, 299, 870
EcoICRI GAGCTC 1 cut(s) 460
EcoRI GAATTC 1 cut(s) 20
EcoRII CCWGG 3 cut(s) 281, 446, 482
EcoT38I GRGCYC 1 cut(s) 462
EgeI GGCGCC 1 cut(s) 444
EheI GGCGCC 1 cut(s) 444
Esp3I CGTCTC 2 cut(s) 665, 925
FaeI CATG 5 cut(s) 85, 103, 1087, 1094, 1136
FaqI GGGAC 2 cut(s) 171, 317
FatI CATG 5 cut(s) 81, 99, 1083, 1090, 1132
FauI CCCGC 1 cut(s) 255
FblI GTMKAC 1 cut(s) 689
FokI GGATG 4 cut(s) 414, 499, 845, 1031
FriOI GRGCYC 1 cut(s) 462
FspBI CTAG 1 cut(s) 585
GlaI GCGC 6 cut(s) 216, 322, 444, 706, 724, 791
GsuI CTGGAG 2 cut(s) 466, 556
HaeII RGCGCY 2 cut(s) 446, 726
HaeIII GGCC 4 cut(s) 53, 278, 532, 806
HapII CCGG 7 cut(s) 50, 227, 440, 648, 693, 773, 871
HgaI GACGC 5 cut(s) 188, 575, 665, 821, 996
HhaI GCGC 6 cut(s) 217, 323, 445, 707, 725, 792
Hin1I GRCGYC 7 cut(s) 443, 567, 657, 674, 683, 813, 934
Hin1II CATG 5 cut(s) 85, 103, 1087, 1094, 1136
Hin6I GCGC 6 cut(s) 215, 321, 443, 705, 723, 790
HinP1I GCGC 6 cut(s) 215, 321, 443, 705, 723, 790
HinfI GANTC 9 cut(s) 232, 341, 515, 554, 603, 698, 739, 845, 1106
HpaII CCGG 7 cut(s) 50, 227, 440, 648, 693, 773, 871
HphI GGTGA 2 cut(s) 142, 241
Hpy166II GTNNAC 2 cut(s) 690, 913
Hpy188I TCNGA 5 cut(s) 744, 786, 825, 925, 1000
Hpy188III TCNNGA 8 cut(s) 69, 156, 191, 345, 463, 897, 938, 1110
Hpy8I GTNNAC 2 cut(s) 690, 913
Hpy99I CGWCG 9 cut(s) 182, 311, 538, 569, 679, 688, 812, 815, 939
HpyAV CCTTC 1 cut(s) 389
HpyCH4III ACNGT 1 cut(s) 291
HpyCH4IV ACGT 4 cut(s) 665, 674, 683, 934
HpyCH4V TGCA 6 cut(s) 136, 212, 262, 970, 990, 1054
HpyF3I CTNAG 3 cut(s) 643, 719, 888
HpySE526I ACGT 4 cut(s) 665, 674, 683, 934
Hsp92I GRCGYC 7 cut(s) 443, 567, 657, 674, 683, 813, 934
Hsp92II CATG 5 cut(s) 85, 103, 1087, 1094, 1136
HspAI GCGC 6 cut(s) 215, 321, 443, 705, 723, 790
KasI GGCGCC 1 cut(s) 442
KroI GCCGGC 1 cut(s) 439
KroNI GCCGGC 1 cut(s) 441
KspI CCGCGG 1 cut(s) 522
Kzo9I GATC 6 cut(s) 310, 423, 781, 875, 893, 945
LguI GCTCTTC 1 cut(s) 539
LmnI GCTCC 1 cut(s) 465
Lsp1109I GCAGC 7 cut(s) 224, 262, 405, 578, 726, 756, 889
LweI GCATC 1 cut(s) 123
MaeI CTAG 1 cut(s) 585
MaeII ACGT 4 cut(s) 665, 674, 683, 934
MaeIII GTNAC 1 cut(s) 661
MalI GATC 6 cut(s) 312, 425, 783, 877, 895, 947
MbiI CCGCTC 1 cut(s) 711
MboI GATC 6 cut(s) 310, 423, 781, 875, 893, 945
MboII GAAGA 7 cut(s) 48, 101, 278, 556, 609, 967, 1119
MfeI CAATTG 1 cut(s) 1139
MhlI GDGCHC 2 cut(s) 296, 462
MluCI AATT 4 cut(s) 4, 20, 974, 1139
Mly113I GGCGCC 1 cut(s) 443
MlyI GAGTC 2 cut(s) 597, 748
MmeI TCCRAC 1 cut(s) 978
MreI CGCCGGCG 1 cut(s) 439
MroNI GCCGGC 1 cut(s) 439
MseI TTAA 1 cut(s) 977
MspA1I CMGCKG 3 cut(s) 253, 521, 769
MspI CCGG 7 cut(s) 50, 227, 440, 648, 693, 773, 871
MspR9I CCNGG 6 cut(s) 283, 448, 484, 649, 871, 872
MunI CAATTG 1 cut(s) 1139
MvaI CCWGG 3 cut(s) 283, 448, 484
MvnI CGCG 3 cut(s) 12, 521, 707
NaeI GCCGGC 1 cut(s) 441
NarI GGCGCC 1 cut(s) 443
NciI CCSGG 3 cut(s) 649, 871, 872
NdeII GATC 6 cut(s) 310, 423, 781, 875, 893, 945
NgoMIV GCCGGC 1 cut(s) 439
NheI GCTAGC 1 cut(s) 584
NlaIII CATG 5 cut(s) 85, 103, 1087, 1094, 1136
NlaIV GGNNCC 3 cut(s) 444, 531, 634
NmeAIII GCCGAG 3 cut(s) 394, 751, 841
NmuCI GTSAC 1 cut(s) 661
NspV TTCGAA 1 cut(s) 24
PaeR7I CTCGAG 1 cut(s) 67
PciSI GCTCTTC 1 cut(s) 539
PcsI WCGNNNNNNNCGW 5 cut(s) 306, 671, 680, 683, 1004
PdiI GCCGGC 1 cut(s) 441
PfeI GAWTC 7 cut(s) 232, 341, 515, 554, 698, 845, 1106
PflFI GACNNNGTC 1 cut(s) 685
PfoI TCCNGGA 1 cut(s) 482
PleI GAGTC 2 cut(s) 597, 747
PluTI GGCGCC 1 cut(s) 446
PpsI GAGTC 2 cut(s) 597, 747
PshBI ATTAAT 1 cut(s) 977
PsiI TTATAA 1 cut(s) 1118
Psp124BI GAGCTC 1 cut(s) 462
Psp6I CCWGG 3 cut(s) 281, 446, 482
PspGI CCWGG 3 cut(s) 281, 446, 482
PspN4I GGNNCC 3 cut(s) 444, 531, 634
PspPI GGNCC 3 cut(s) 453, 530, 910
PstI CTGCAG 1 cut(s) 214
PsyI GACNNNGTC 1 cut(s) 685
PvuII CAGCTG 1 cut(s) 253
RsaI GTAC 1 cut(s) 1059
RsaNI GTAC 1 cut(s) 1058
SacI GAGCTC 1 cut(s) 462
SacII CCGCGG 1 cut(s) 522
SapI GCTCTTC 1 cut(s) 539
SaqAI TTAA 1 cut(s) 977
Sau3AI GATC 6 cut(s) 310, 423, 781, 875, 893, 945
Sau96I GGNCC 3 cut(s) 453, 530, 910
SchI GAGTC 2 cut(s) 597, 748
ScrFI CCNGG 6 cut(s) 283, 448, 484, 649, 871, 872
SduI GDGCHC 2 cut(s) 296, 462
SfaNI GCATC 1 cut(s) 123
SfcI CTRYAG 2 cut(s) 210, 287
SfoI GGCGCC 1 cut(s) 444
Sfr274I CTCGAG 1 cut(s) 67
Sfr303I CCGCGG 1 cut(s) 522
SfuI TTCGAA 1 cut(s) 24
SgrAI CRCCGGYG 2 cut(s) 226, 439
SgrBI CCGCGG 1 cut(s) 522
SinI GGWCC 2 cut(s) 453, 910
SlaI CTCGAG 1 cut(s) 67
SmaI CCCGGG 1 cut(s) 872
SmlI CTYRAG 1 cut(s) 67
SmoI CTYRAG 1 cut(s) 67
Sse9I AATT 4 cut(s) 4, 20, 974, 1139
SspDI GGCGCC 1 cut(s) 442
SspI AATATT 1 cut(s) 1098
SspMI CTAG 1 cut(s) 585
SstI GAGCTC 1 cut(s) 462
StyD4I CCNGG 6 cut(s) 281, 446, 482, 647, 869, 870
TaaI ACNGT 1 cut(s) 291
TaiI ACGT 4 cut(s) 668, 677, 686, 937
TaqI TCGA 9 cut(s) 24, 68, 542, 557, 564, 737, 878, 937, 1109
TaqII GACCGA 1 cut(s) 470
TasI AATT 4 cut(s) 4, 20, 974, 1139
TatI WGTACW 1 cut(s) 1057
TfiI GAWTC 7 cut(s) 232, 341, 515, 554, 698, 845, 1106
Tru1I TTAA 1 cut(s) 977
Tru9I TTAA 1 cut(s) 977
TscAI CASTG 1 cut(s) 296
TseFI GTSAC 1 cut(s) 661
TseI GCWGC 7 cut(s) 212, 250, 418, 591, 714, 769, 902
Tsp45I GTSAC 1 cut(s) 661
TspDTI ATGAA 5 cut(s) 17, 528, 1035, 1072, 1149
TspGWI ACGGA 1 cut(s) 135
TspMI CCCGGG 1 cut(s) 870
TspRI CASTG 1 cut(s) 296
Tth111I GACNNNGTC 1 cut(s) 685
VpaK11BI GGWCC 2 cut(s) 453, 910
VspI ATTAAT 1 cut(s) 977
XapI RAATTY 1 cut(s) 20
XhoI CTCGAG 1 cut(s) 67
XmaI CCCGGG 1 cut(s) 870
XmiI GTMKAC 1 cut(s) 689
XspI CTAG 1 cut(s) 585
ZraI GACGTC 3 cut(s) 675, 684, 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.