No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G45900 |
| fragaria_vesca | FvH4_5g24100 FvH4_5g24100 |
| malus_domestica | MD00G1002200.v1.1 MD06G1017100.v1.1 |
| prunus_persica | Prupe.5G019400_v2.0.a1 Prupe.5G019400_v2.0.a1 |
| pyrus_communis | pycom06g01380 pycom16g25530 |
| rosa_chinensis | RchiOBHm_Chr7g0213631 |
| rosa_laevigata | RLG00000002795 |
| rosa_multiflora | Rmu_co8487661.1_g000001 Rmu_sc0008101.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00245730 |
| rosa_rugosa | Rorug07G0143500 Rorug07G0143600 |
| rosa_samantha | Rh7AG276600 Rh7BG270800 Rh7CG295600 Rh7DG282800 |
| rosa_wichuraiana | Rw0G023510 Rw7G023870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 848 |
| Acc65I | GGTACC | 2 cut(s) | 107, 1072 |
| AccB1I | GGYRCC | 2 cut(s) | 107, 1072 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 897 |
| AccI | GTMKAC | 1 cut(s) | 837 |
| AciI | CCGC | 8 cut(s) | 482, 511, 568, 595, 618, 759, 808, 1118 |
| AclWI | GGATC | 2 cut(s) | 286, 1154 |
| AcoI | YGGCCR | 2 cut(s) | 634, 747 |
| AcsI | RAATTY | 4 cut(s) | 693, 1036, 1211, 1390 |
| AcyI | GRCGYC | 2 cut(s) | 615, 789 |
| AfaI | GTAC | 6 cut(s) | 109, 909, 954, 1074, 1195, 1278 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 397, 474, 520, 540, 696, 820, 897 |
| AgeI | ACCGGT | 2 cut(s) | 207, 248 |
| AgsI | TTSAA | 5 cut(s) | 926, 1022, 1238, 1375, 1430 |
| AjnI | CCWGG | 7 cut(s) | 396, 408, 432, 539, 647, 672, 1323 |
| Alw21I | GWGCWC | 4 cut(s) | 129, 380, 441, 462 |
| AlwI | GGATC | 2 cut(s) | 286, 1154 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1267 |
| AoxI | GGCC | 5 cut(s) | 388, 634, 747, 1326, 1407 |
| ApeKI | GCWGC | 4 cut(s) | 4, 93, 340, 598 |
| ApoI | RAATTY | 4 cut(s) | 693, 1036, 1211, 1390 |
| AsiGI | ACCGGT | 2 cut(s) | 207, 248 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1434 |
| Asp718I | GGTACC | 2 cut(s) | 107, 1072 |
| AspLEI | GCGC | 2 cut(s) | 689, 1454 |
| AspS9I | GGNCC | 4 cut(s) | 210, 251, 990, 1408 |
| AsuC2I | CCSGG | 1 cut(s) | 469 |
| AsuHPI | GGTGA | 3 cut(s) | 123, 797, 995 |
| AvaII | GGWCC | 3 cut(s) | 210, 251, 990 |
| BaeGI | GKGCMC | 1 cut(s) | 327 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 917, 950 |
| BalI | TGGCCA | 2 cut(s) | 636, 749 |
| BanI | GGYRCC | 2 cut(s) | 107, 1072 |
| BanII | GRGCYC | 3 cut(s) | 129, 441, 462 |
| BauI | CACGAG | 1 cut(s) | 1458 |
| BbsI | GAAGAC | 1 cut(s) | 150 |
| Bbv12I | GWGCWC | 4 cut(s) | 129, 380, 441, 462 |
| BbvCI | CCTCAGC | 1 cut(s) | 777 |
| BbvI | GCAGC | 4 cut(s) | 16, 80, 352, 585 |
| BccI | CCATC | 4 cut(s) | 630, 974, 1264, 1442 |
| BceAI | ACGGC | 1 cut(s) | 833 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 446, 480 |
| BciT130I | CCWGG | 7 cut(s) | 398, 410, 434, 541, 649, 674, 1325 |
| BcnI | CCSGG | 1 cut(s) | 469 |
| BfaI | CTAG | 3 cut(s) | 977, 1443, 1482 |
| BfoI | RGCGCY | 2 cut(s) | 690, 1455 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 816 |
| BglII | AGATCT | 2 cut(s) | 552, 1423 |
| BisI | GCNGC | 6 cut(s) | 5, 94, 341, 596, 599, 618 |
| BlsI | GCNGC | 6 cut(s) | 6, 95, 342, 597, 600, 619 |
| Bme1390I | CCNGG | 8 cut(s) | 398, 410, 434, 469, 541, 649, 674, 1325 |
| Bme18I | GGWCC | 3 cut(s) | 210, 251, 990 |
| BmgT120I | GGNCC | 4 cut(s) | 210, 251, 990, 1408 |
| BmiI | GGNNCC | 3 cut(s) | 109, 1074, 1322 |
| BmrFI | CCNGG | 8 cut(s) | 398, 410, 434, 469, 541, 649, 674, 1325 |
| BmsI | GCATC | 1 cut(s) | 874 |
| BpiI | GAAGAC | 1 cut(s) | 150 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 146, 178 |
| BpmI | CTGGAG | 4 cut(s) | 284, 425, 677, 683 |
| Bpu10I | CCTNAGC | 2 cut(s) | 392, 777 |
| BpuMI | CCSGG | 1 cut(s) | 469 |
| BsaHI | GRCGYC | 2 cut(s) | 615, 789 |
| BsaJI | CCNNGG | 9 cut(s) | 385, 397, 540, 585, 672, 814, 956, 968, 1068 |
| BsaWI | WCCGGW | 3 cut(s) | 207, 248, 1256 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 397, 474, 520, 540, 696, 820, 897 |
| Bse118I | RCCGGY | 2 cut(s) | 207, 248 |
| Bse1I | ACTGG | 1 cut(s) | 301 |
| BseBI | CCWGG | 7 cut(s) | 398, 410, 434, 541, 649, 674, 1325 |
| BseDI | CCNNGG | 9 cut(s) | 385, 397, 540, 585, 672, 814, 956, 968, 1068 |
| BseGI | GGATG | 1 cut(s) | 910 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 397, 474, 520, 540, 696, 820, 897 |
| BseMII | CTCAG | 6 cut(s) | 20, 114, 179, 383, 768, 1192 |
| BseNI | ACTGG | 1 cut(s) | 301 |
| BseRI | GAGGAG | 3 cut(s) | 602, 777, 780 |
| BseSI | GKGCMC | 1 cut(s) | 327 |
| BseXI | GCAGC | 4 cut(s) | 16, 80, 352, 585 |
| BseYI | CCCAGC | 1 cut(s) | 1315 |
| BsgI | GTGCAG | 1 cut(s) | 1159 |
| BshFI | GGCC | 5 cut(s) | 390, 636, 749, 1328, 1409 |
| BshNI | GGYRCC | 2 cut(s) | 107, 1072 |
| BshTI | ACCGGT | 2 cut(s) | 207, 248 |
| BsiHKAI | GWGCWC | 4 cut(s) | 129, 380, 441, 462 |
| BsiSI | CCGG | 5 cut(s) | 208, 249, 469, 514, 1257 |
| BslFI | GGGAC | 2 cut(s) | 740, 1322 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 397, 474, 520, 540, 696, 820, 897 |
| BsmFI | GGGAC | 2 cut(s) | 740, 1322 |
| BsmI | GAATGC | 1 cut(s) | 1152 |
| BsnI | GGCC | 5 cut(s) | 390, 636, 749, 1328, 1409 |
| Bsp1286I | GDGCHC | 5 cut(s) | 129, 327, 380, 441, 462 |
| Bsp1407I | TGTACA | 1 cut(s) | 907 |
| Bsp143I | GATC | 6 cut(s) | 291, 552, 609, 1132, 1159, 1423 |
| BspACI | CCGC | 8 cut(s) | 482, 511, 568, 595, 618, 759, 808, 1118 |
| BspANI | GGCC | 5 cut(s) | 390, 636, 749, 1328, 1409 |
| BspCNI | CTCAG | 6 cut(s) | 21, 115, 178, 384, 769, 1191 |
| BspHI | TCATGA | 1 cut(s) | 501 |
| BspLI | GGNNCC | 3 cut(s) | 109, 1074, 1322 |
| BspPI | GGATC | 2 cut(s) | 286, 1154 |
| BspQI | GCTCTTC | 1 cut(s) | 480 |
| BspT107I | GGYRCC | 2 cut(s) | 107, 1072 |
| BsrFI | RCCGGY | 2 cut(s) | 207, 248 |
| BsrGI | TGTACA | 1 cut(s) | 907 |
| BsrI | ACTGG | 1 cut(s) | 301 |
| BssAI | RCCGGY | 2 cut(s) | 207, 248 |
| BssECI | CCNNGG | 9 cut(s) | 385, 397, 540, 585, 672, 814, 956, 968, 1068 |
| BssMI | GATC | 6 cut(s) | 291, 552, 609, 1132, 1159, 1423 |
| BssNI | GRCGYC | 2 cut(s) | 615, 789 |
| BssSI | CACGAG | 1 cut(s) | 1458 |
| BssT1I | CCWWGG | 5 cut(s) | 385, 814, 956, 968, 1068 |
| Bst2BI | CACGAG | 1 cut(s) | 1458 |
| Bst2UI | CCWGG | 7 cut(s) | 398, 410, 434, 541, 649, 674, 1325 |
| Bst4CI | ACNGT | 4 cut(s) | 803, 912, 930, 1347 |
| Bst6I | CTCTTC | 3 cut(s) | 65, 480, 1289 |
| BstACI | GRCGYC | 2 cut(s) | 615, 789 |
| BstAUI | TGTACA | 1 cut(s) | 907 |
| BstC8I | GCNNGC | 6 cut(s) | 458, 480, 562, 582, 1245, 1407 |
| BstDEI | CTNAG | 6 cut(s) | 29, 123, 165, 392, 777, 1178 |
| BstF5I | GGATG | 1 cut(s) | 910 |
| BstH2I | RGCGCY | 2 cut(s) | 690, 1455 |
| BstHHI | GCGC | 2 cut(s) | 689, 1454 |
| BstKTI | GATC | 6 cut(s) | 294, 555, 612, 1135, 1162, 1426 |
| BstMBI | GATC | 6 cut(s) | 291, 552, 609, 1132, 1159, 1423 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 496, 581, 788, 816, 973 |
| BstNI | CCWGG | 7 cut(s) | 398, 410, 434, 541, 649, 674, 1325 |
| BstSCI | CCNGG | 8 cut(s) | 396, 408, 432, 467, 539, 647, 672, 1323 |
| BstSLI | GKGCMC | 1 cut(s) | 327 |
| BstV1I | GCAGC | 4 cut(s) | 16, 80, 352, 585 |
| BstV2I | GAAGAC | 1 cut(s) | 150 |
| BstX2I | RGATCY | 2 cut(s) | 552, 1423 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 655 |
| BstYI | RGATCY | 2 cut(s) | 552, 1423 |
| BsuRI | GGCC | 5 cut(s) | 390, 636, 749, 1328, 1409 |
| BtsCI | GGATG | 1 cut(s) | 910 |
| BtsIMutI | CAGTG | 1 cut(s) | 799 |
| Cac8I | GCNNGC | 6 cut(s) | 458, 480, 562, 582, 1245, 1407 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1267 |
| CciI | TCATGA | 1 cut(s) | 501 |
| CfoI | GCGC | 2 cut(s) | 689, 1454 |
| Cfr10I | RCCGGY | 2 cut(s) | 207, 248 |
| Cfr13I | GGNCC | 4 cut(s) | 210, 251, 990, 1408 |
| CseI | GACGC | 3 cut(s) | 623, 782, 797 |
| Csp6I | GTAC | 6 cut(s) | 108, 908, 953, 1073, 1194, 1277 |
| CspAI | ACCGGT | 2 cut(s) | 207, 248 |
| CviAII | CATG | 6 cut(s) | 310, 502, 644, 733, 745, 940 |
| CviQI | GTAC | 6 cut(s) | 108, 908, 953, 1073, 1194, 1277 |
| DdeI | CTNAG | 6 cut(s) | 29, 123, 165, 392, 777, 1178 |
| DpnI | GATC | 6 cut(s) | 293, 554, 611, 1134, 1161, 1425 |
| DpnII | GATC | 6 cut(s) | 291, 552, 609, 1132, 1159, 1423 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 848 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 848 |
| EaeI | YGGCCR | 2 cut(s) | 634, 747 |
| Eam1104I | CTCTTC | 3 cut(s) | 65, 480, 1289 |
| EarI | CTCTTC | 3 cut(s) | 65, 480, 1289 |
| EciI | GGCGGA | 2 cut(s) | 497, 774 |
| Ecl136II | GAGCTC | 3 cut(s) | 127, 439, 460 |
| Eco130I | CCWWGG | 5 cut(s) | 385, 814, 956, 968, 1068 |
| Eco24I | GRGCYC | 3 cut(s) | 129, 441, 462 |
| Eco32I | GATATC | 1 cut(s) | 1487 |
| Eco47I | GGWCC | 3 cut(s) | 210, 251, 990 |
| Eco53kI | GAGCTC | 3 cut(s) | 127, 439, 460 |
| EcoICRI | GAGCTC | 3 cut(s) | 127, 439, 460 |
| EcoRI | GAATTC | 1 cut(s) | 693 |
| EcoRII | CCWGG | 7 cut(s) | 396, 408, 432, 539, 647, 672, 1323 |
| EcoRV | GATATC | 1 cut(s) | 1487 |
| EcoT14I | CCWWGG | 5 cut(s) | 385, 814, 956, 968, 1068 |
| EcoT38I | GRGCYC | 3 cut(s) | 129, 441, 462 |
| ErhI | CCWWGG | 5 cut(s) | 385, 814, 956, 968, 1068 |
| FaeI | CATG | 6 cut(s) | 313, 505, 647, 736, 748, 943 |
| FaqI | GGGAC | 2 cut(s) | 740, 1322 |
| FatI | CATG | 6 cut(s) | 309, 501, 643, 732, 744, 939 |
| FauI | CCCGC | 2 cut(s) | 518, 1111 |
| FblI | GTMKAC | 1 cut(s) | 837 |
| Fnu4HI | GCNGC | 6 cut(s) | 5, 94, 341, 596, 599, 618 |
| FokI | GGATG | 1 cut(s) | 917 |
| FriOI | GRGCYC | 3 cut(s) | 129, 441, 462 |
| Fsp4HI | GCNGC | 6 cut(s) | 5, 94, 341, 596, 599, 618 |
| FspBI | CTAG | 3 cut(s) | 977, 1443, 1482 |
| GlaI | GCGC | 2 cut(s) | 688, 1453 |
| GluI | GCNGC | 6 cut(s) | 5, 94, 341, 596, 599, 618 |
| GsaI | CCCAGC | 1 cut(s) | 1319 |
| GsuI | CTGGAG | 4 cut(s) | 284, 425, 677, 683 |
| HaeII | RGCGCY | 2 cut(s) | 690, 1455 |
| HaeIII | GGCC | 5 cut(s) | 390, 636, 749, 1328, 1409 |
| HapII | CCGG | 5 cut(s) | 208, 249, 469, 514, 1257 |
| HgaI | GACGC | 3 cut(s) | 623, 782, 797 |
| HhaI | GCGC | 2 cut(s) | 689, 1454 |
| Hin1I | GRCGYC | 2 cut(s) | 615, 789 |
| Hin1II | CATG | 6 cut(s) | 313, 505, 647, 736, 748, 943 |
| Hin6I | GCGC | 2 cut(s) | 687, 1452 |
| HinP1I | GCGC | 2 cut(s) | 687, 1452 |
| HincII | GTYRAC | 1 cut(s) | 787 |
| HindII | GTYRAC | 1 cut(s) | 787 |
| HindIII | AAGCTT | 1 cut(s) | 50 |
| HpaII | CCGG | 5 cut(s) | 208, 249, 469, 514, 1257 |
| HphI | GGTGA | 3 cut(s) | 123, 797, 995 |
| Hpy166II | GTNNAC | 4 cut(s) | 787, 838, 990, 1196 |
| Hpy188I | TCNGA | 4 cut(s) | 124, 1168, 1364, 1421 |
| Hpy8I | GTNNAC | 4 cut(s) | 787, 838, 990, 1196 |
| Hpy99I | CGWCG | 4 cut(s) | 551, 617, 854, 1347 |
| HpyAV | CCTTC | 3 cut(s) | 865, 1086, 1424 |
| HpyCH4III | ACNGT | 4 cut(s) | 803, 912, 930, 1347 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 1140, 1150, 1247 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 496, 581, 788, 816, 973 |
| HpyF3I | CTNAG | 6 cut(s) | 29, 123, 165, 392, 777, 1178 |
| Hsp92I | GRCGYC | 2 cut(s) | 615, 789 |
| Hsp92II | CATG | 6 cut(s) | 313, 505, 647, 736, 748, 943 |
| HspAI | GCGC | 2 cut(s) | 687, 1452 |
| KpnI | GGTACC | 2 cut(s) | 111, 1076 |
| Kzo9I | GATC | 6 cut(s) | 291, 552, 609, 1132, 1159, 1423 |
| LguI | GCTCTTC | 1 cut(s) | 480 |
| LmnI | GCTCC | 6 cut(s) | 383, 424, 436, 444, 658, 767 |
| Lsp1109I | GCAGC | 4 cut(s) | 16, 80, 352, 585 |
| LweI | GCATC | 1 cut(s) | 874 |
| MaeI | CTAG | 3 cut(s) | 977, 1443, 1482 |
| MaeIII | GTNAC | 4 cut(s) | 35, 138, 168, 803 |
| MalI | GATC | 6 cut(s) | 293, 554, 611, 1134, 1161, 1425 |
| MboI | GATC | 6 cut(s) | 291, 552, 609, 1132, 1159, 1423 |
| MflI | RGATCY | 2 cut(s) | 552, 1423 |
| MhlI | GDGCHC | 5 cut(s) | 129, 327, 380, 441, 462 |
| MlsI | TGGCCA | 2 cut(s) | 636, 749 |
| MluCI | AATT | 7 cut(s) | 630, 693, 1013, 1028, 1036, 1211, 1390 |
| MluNI | TGGCCA | 2 cut(s) | 636, 749 |
| MlyI | GAGTC | 6 cut(s) | 164, 192, 233, 518, 860, 971 |
| MmeI | TCCRAC | 2 cut(s) | 237, 278 |
| Mox20I | TGGCCA | 2 cut(s) | 636, 749 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1434 |
| MscI | TGGCCA | 2 cut(s) | 636, 749 |
| MslI | CAYNNNNRTG | 1 cut(s) | 642 |
| Msp20I | TGGCCA | 2 cut(s) | 636, 749 |
| MspA1I | CMGCKG | 1 cut(s) | 28 |
| MspI | CCGG | 5 cut(s) | 208, 249, 469, 514, 1257 |
| MspR9I | CCNGG | 8 cut(s) | 398, 410, 434, 469, 541, 649, 674, 1325 |
| Mva1269I | GAATGC | 1 cut(s) | 1152 |
| MvaI | CCWGG | 7 cut(s) | 398, 410, 434, 541, 649, 674, 1325 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 496, 581, 788, 816, 973 |
| NciI | CCSGG | 1 cut(s) | 469 |
| NdeII | GATC | 6 cut(s) | 291, 552, 609, 1132, 1159, 1423 |
| NlaIII | CATG | 6 cut(s) | 313, 505, 647, 736, 748, 943 |
| NlaIV | GGNNCC | 3 cut(s) | 109, 1074, 1322 |
| NmeAIII | GCCGAG | 1 cut(s) | 610 |
| NmuCI | GTSAC | 3 cut(s) | 35, 168, 803 |
| PagI | TCATGA | 1 cut(s) | 501 |
| PciSI | GCTCTTC | 1 cut(s) | 480 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 543, 846 |
| PctI | GAATGC | 1 cut(s) | 1152 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1434 |
| PfeI | GAWTC | 6 cut(s) | 652, 680, 917, 1223, 1355, 1413 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 897 |
| PfoI | TCCNGGA | 1 cut(s) | 432 |
| PinAI | ACCGGT | 2 cut(s) | 207, 248 |
| PkrI | GCNGC | 6 cut(s) | 6, 95, 342, 597, 600, 619 |
| PleI | GAGTC | 6 cut(s) | 163, 192, 233, 518, 860, 970 |
| PpsI | GAGTC | 6 cut(s) | 163, 192, 233, 518, 860, 970 |
| Psp124BI | GAGCTC | 3 cut(s) | 129, 441, 462 |
| Psp6I | CCWGG | 7 cut(s) | 396, 408, 432, 539, 647, 672, 1323 |
| PspFI | CCCAGC | 1 cut(s) | 1315 |
| PspGI | CCWGG | 7 cut(s) | 396, 408, 432, 539, 647, 672, 1323 |
| PspN4I | GGNNCC | 3 cut(s) | 109, 1074, 1322 |
| PspPI | GGNCC | 4 cut(s) | 210, 251, 990, 1408 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1014, 1046 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1267 |
| PsuI | RGATCY | 2 cut(s) | 552, 1423 |
| PvuII | CAGCTG | 1 cut(s) | 28 |
| RsaI | GTAC | 6 cut(s) | 109, 909, 954, 1074, 1195, 1278 |
| RsaNI | GTAC | 6 cut(s) | 108, 908, 953, 1073, 1194, 1277 |
| RseI | CAYNNNNRTG | 1 cut(s) | 642 |
| SacI | GAGCTC | 3 cut(s) | 129, 441, 462 |
| SapI | GCTCTTC | 1 cut(s) | 480 |
| SatI | GCNGC | 6 cut(s) | 5, 94, 341, 596, 599, 618 |
| Sau3AI | GATC | 6 cut(s) | 291, 552, 609, 1132, 1159, 1423 |
| Sau96I | GGNCC | 4 cut(s) | 210, 251, 990, 1408 |
| SchI | GAGTC | 6 cut(s) | 164, 192, 233, 518, 860, 971 |
| ScrFI | CCNGG | 8 cut(s) | 398, 410, 434, 469, 541, 649, 674, 1325 |
| SduI | GDGCHC | 5 cut(s) | 129, 327, 380, 441, 462 |
| SfaNI | GCATC | 1 cut(s) | 874 |
| SinI | GGWCC | 3 cut(s) | 210, 251, 990 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 642 |
| Sse9I | AATT | 7 cut(s) | 630, 693, 1013, 1028, 1036, 1211, 1390 |
| SsiI | CCGC | 8 cut(s) | 482, 511, 568, 595, 618, 759, 808, 1118 |
| SspI | AATATT | 1 cut(s) | 1472 |
| SspMI | CTAG | 3 cut(s) | 977, 1443, 1482 |
| SstI | GAGCTC | 3 cut(s) | 129, 441, 462 |
| StyD4I | CCNGG | 8 cut(s) | 396, 408, 432, 467, 539, 647, 672, 1323 |
| StyI | CCWWGG | 5 cut(s) | 385, 814, 956, 968, 1068 |
| TaaI | ACNGT | 4 cut(s) | 803, 912, 930, 1347 |
| TaqI | TCGA | 6 cut(s) | 290, 549, 612, 864, 1004, 1221 |
| TasI | AATT | 7 cut(s) | 630, 693, 1013, 1028, 1036, 1211, 1390 |
| TatI | WGTACW | 2 cut(s) | 907, 1276 |
| TauI | GCSGC | 2 cut(s) | 598, 620 |
| TfiI | GAWTC | 6 cut(s) | 652, 680, 917, 1223, 1355, 1413 |
| TscAI | CASTG | 1 cut(s) | 806 |
| TseFI | GTSAC | 3 cut(s) | 35, 168, 803 |
| TseI | GCWGC | 4 cut(s) | 4, 93, 340, 598 |
| Tsp45I | GTSAC | 3 cut(s) | 35, 168, 803 |
| TspDTI | ATGAA | 4 cut(s) | 733, 930, 956, 1068 |
| TspGWI | ACGGA | 3 cut(s) | 197, 1265, 1298 |
| TspRI | CASTG | 1 cut(s) | 806 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 897 |
| VpaK11BI | GGWCC | 3 cut(s) | 210, 251, 990 |
| XapI | RAATTY | 4 cut(s) | 693, 1036, 1211, 1390 |
| XbaI | TCTAGA | 1 cut(s) | 1481 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 629 |
| XmiI | GTMKAC | 1 cut(s) | 837 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1434 |
| XspI | CTAG | 3 cut(s) | 977, 1443, 1482 |