Rorug07G0143500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0009161
Physical Location & Seq
Reverse (-)
11331632 .. 11334234
2603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0143500.1

Sequence Viewer

Length: 1497 bp
ATGGCTGACACTGCAATTACCGATATGCCCAACAACACCAGGAAGCCCAGGACCACCCGAAAGGCGCTGAAGGCCAAGACCCCATCGACAAACGAAGCCAACATCCTGGCCGGAACGGTCTCCGAGGCAGCTCCGAGCCCGATCCCGACCGGACCCGAGTCCGACCCGGCGAAGGAGAACCACGAGAGCCTCTCTCAGCCTCGCACGTCGCCCAAGAAAGCAGCCAAGGCGTCGAGGAAACAGTCGAAAGCGGCGAAGGAGACGCAGTCGAGTTTCGAGAAGGACCTGCAGGAAATGGAGGAGAAGCTTCAGGCTCTGAGGCTCGAGAAGGAGAAGACGGAGGAGATGTTGAAGGAGAAGGATGAGATCTTGAAGCTTAAGGAGGAGGAGCTCGAATCCAAGGGTCGGGAGCAAGATAAGCTTCAGATGGAGCTCAAGAAGTTGCAGAAATTGAAGGAGTTCAAGCCCACCATGGCATTCCCAATTATACCATCACAGAAAGACAAGAAAAAGAAGGGTGGCCCTGAAATGAAAAGGCCATCGCCTCCGTATGTCCTATGGTGCAAAGATCAGTGGAATCAGGTCAAGCAAGAGAACCCTGAGGCAGAGTTTAAGGACATATCAACCATTTTGGGGGCCAAGTGGAAGAATGTCACAGCAGAAGAGAAAAAGCCGTATGAAGAGAAGTACCAGGCGGAGAAGGAAGCCTATTTGCAAGTGATGGCGAAAGAGAAGCGTGAGAGTGAAGCAATGCACCTGTTTGAGGAGGAGCACAAGCAGAAGACAGCTATGGAGTTGCTTGAACAATACATGCAATTCAAACAAGAAGCAGAAAAGGATAACAAGAAGAACAAGAAAGAAAAGGATCCATTGAAACCCAAGCAGCCAATGTCTGCGTTTTTCCTGTTCACAAATGAGAGGCGAGCAGCCTTGAATGCACAGAACATAAAATCGGCTCTAGAGGTTGCAAAAATCACCGGTGAAGAATGGAAGAACATGACAGAGGAGCAAAAGGGTCCATATGAAGAGATGGCAAAGAAGAACAAGGAGAAGTATATGCAAGAAATGGAGGTCTATAAGCAACAGAAGGAAGAGGAAGCTGCCATCTGCAGAAAGGAAGAGGAAGAGATGATGAAACTTCAAAAGCATGAAGCCTTTCAACTGCTTAAGAAGAAGGAGAAGACAGAGAACATAATCAAGAAAACAAAAGAGATTGAGAAGAAGAAGAAGGAAGAAAAGAAGCTTGCTGATCCCAACAAGCCCAAGAGGCCTGCATCCTCATACATTCTGTTCAGCAAGGAAGCAAGAAAGAATCTGTTGGAGGAGAGACCAGGAATCAATAACTCCACTATTACTGCTCTCATTTCAGTTAAATGGAAGGAATTGAGTGAAGAAGAAAGAAAGGTGTGGAACGACCAGGCTGCTGAAGCAATGGAGGCTTATAAGAAGGAGTTGGAGGAATACAACAAGTCTGTTGCTGCATCCATCCAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

498

Amino Acids

58.02

Weight (kDa)

8.99

Isoelectric Point (pI)

58.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HMG_box PF00505 178 - 242 5.8e-18 HMG (high mobility group) box
HMG_box_2 PF09011 178 - 241 3.2e-11 HMG-box domain
HMG_box_2 PF09011 290 - 359 3.4e-14 HMG-box domain
HMG_box PF00505 293 - 360 1.1e-17 HMG (high mobility group) box
HMG_box_2 PF09011 418 - 489 9.2e-13 HMG-box domain
HMG_box PF00505 421 - 489 6e-18 HMG (high mobility group) box
HMG_WDHD1 PF24815 424 - 472 8.4e-07 WDHD1 HMG box
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1443
Acc36I ACCTGC 1 cut(s) 294
AciI CCGC 2 cut(s) 251, 695
AclWI GGATC 4 cut(s) 136, 860, 873, 1244
AcoI YGGCCR 1 cut(s) 108
AcuI CTGAAG 4 cut(s) 89, 293, 407, 1446
AcyI GRCGYC 1 cut(s) 230
AfaI GTAC 1 cut(s) 689
AfiI CCNNNNNNNGG 4 cut(s) 172, 405, 633, 763
AflII CTTAAG 2 cut(s) 377, 1166
AgeI ACCGGT 1 cut(s) 977
AjiI CACGTC 1 cut(s) 207
AjnI CCWGG 6 cut(s) 38, 47, 105, 690, 1330, 1416
AluBI AGCT 9 cut(s) 131, 307, 376, 391, 421, 433, 788, 1100, 1243
AluI AGCT 9 cut(s) 131, 307, 376, 391, 421, 433, 788, 1100, 1243
Alw21I GWGCWC 3 cut(s) 393, 435, 774
Alw26I GTCTC 3 cut(s) 124, 254, 1321
AlwI GGATC 4 cut(s) 136, 860, 873, 1244
AlwNI CAGNNNCTG 1 cut(s) 316
Ama87I CYCGRG 2 cut(s) 155, 323
AoxI GGCC 6 cut(s) 72, 108, 520, 536, 636, 1268
ApeKI GCWGC 7 cut(s) 128, 221, 883, 926, 1100, 1421, 1478
AsiGI ACCGGT 1 cut(s) 977
Asp700I GAANNNNTTC 2 cut(s) 458, 1155
AspLEI GCGC 1 cut(s) 67
AspS9I GGNCC 6 cut(s) 51, 152, 283, 521, 636, 1016
AsuC2I CCSGG 1 cut(s) 167
AsuHPI GGTGA 2 cut(s) 967, 992
AvaI CYCGRG 2 cut(s) 155, 323
AvaII GGWCC 4 cut(s) 51, 152, 283, 1016
AxyI CCTNAGG 1 cut(s) 600
BamHI GGATCC 1 cut(s) 865
BanII GRGCYC 3 cut(s) 140, 393, 435
BauI CACGAG 1 cut(s) 182
BbsI GAAGAC 3 cut(s) 341, 788, 1187
Bbv12I GWGCWC 3 cut(s) 393, 435, 774
BbvI GCAGC 7 cut(s) 140, 233, 895, 938, 1087, 1408, 1465
BccI CCATC 8 cut(s) 91, 421, 499, 547, 715, 1024, 1112, 1493
BceAI ACGGC 1 cut(s) 658
BcgI CGANNNNNNTGC 2 cut(s) 1403, 1437
BciT130I CCWGG 6 cut(s) 40, 49, 107, 692, 1332, 1418
BcnI CCSGG 1 cut(s) 167
BcoDI GTCTC 3 cut(s) 124, 254, 1321
BfaI CTAG 1 cut(s) 959
BfmI CTRYAG 2 cut(s) 287, 1108
BfoI RGCGCY 1 cut(s) 68
BfrI CTTAAG 2 cut(s) 377, 1166
BfuAI ACCTGC 1 cut(s) 294
BglI GCCNNNNNGGC 1 cut(s) 1267
BglII AGATCT 1 cut(s) 366
BisI GCNGC 8 cut(s) 129, 222, 252, 884, 927, 1101, 1422, 1479
BlsI GCNGC 8 cut(s) 130, 223, 253, 885, 928, 1102, 1423, 1480
Bme1390I CCNGG 7 cut(s) 40, 49, 107, 167, 692, 1332, 1418
Bme18I GGWCC 4 cut(s) 51, 152, 283, 1016
BmeT110I CYCGRG 2 cut(s) 155, 323
BmgBI CACGTC 1 cut(s) 207
BmgT120I GGNCC 6 cut(s) 51, 152, 283, 521, 636, 1016
BmiI GGNNCC 4 cut(s) 154, 637, 867, 1017
BmrFI CCNGG 7 cut(s) 40, 49, 107, 167, 692, 1332, 1418
BmsI GCATC 2 cut(s) 1283, 1490
BoxI GACNNNNGTC 1 cut(s) 157
BpiI GAAGAC 3 cut(s) 341, 788, 1187
BplI GAGNNNNNCTC 4 cut(s) 176, 208, 178, 210
BpuEI CTTGAG 1 cut(s) 419
BpuMI CCSGG 1 cut(s) 167
BsaHI GRCGYC 1 cut(s) 230
BsaI GGTCTC 2 cut(s) 124, 1321
BsaJI CCNNGG 5 cut(s) 47, 123, 225, 399, 471
BsaWI WCCGGW 2 cut(s) 149, 977
BsaXI ACNNNNNCTCC 4 cut(s) 251, 281, 332, 362
Bsc4I CCNNNNNNNGG 4 cut(s) 172, 405, 633, 763
Bse118I RCCGGY 1 cut(s) 977
Bse21I CCTNAGG 1 cut(s) 600
Bse3DI GCAATG 2 cut(s) 756, 1437
BseBI CCWGG 6 cut(s) 40, 49, 107, 692, 1332, 1418
BseDI CCNNGG 5 cut(s) 47, 123, 225, 399, 471
BseGI GGATG 5 cut(s) 102, 367, 1274, 1481, 1485
BseLI CCNNNNNNNGG 4 cut(s) 172, 405, 633, 763
BseMI GCAATG 2 cut(s) 756, 1437
BseMII CTCAG 3 cut(s) 209, 308, 591
BseRI GAGGAG 8 cut(s) 314, 356, 398, 401, 779, 782, 1019, 1337
BseXI GCAGC 7 cut(s) 140, 233, 895, 938, 1087, 1408, 1465
Bsh1285I CGRYCG 1 cut(s) 150
BshFI GGCC 6 cut(s) 74, 110, 522, 538, 638, 1270
BshTI ACCGGT 1 cut(s) 977
BsiEI CGRYCG 1 cut(s) 150
BsiHKAI GWGCWC 3 cut(s) 393, 435, 774
BsiHKCI CYCGRG 2 cut(s) 155, 323
BsiSI CCGG 4 cut(s) 111, 150, 167, 978
BslI CCNNNNNNNGG 4 cut(s) 172, 405, 633, 763
BsmAI GTCTC 3 cut(s) 124, 254, 1321
BsmBI CGTCTC 1 cut(s) 254
BsmI GAATGC 2 cut(s) 476, 940
BsnI GGCC 6 cut(s) 74, 110, 522, 538, 638, 1270
Bso31I GGTCTC 2 cut(s) 124, 1321
BsoBI CYCGRG 2 cut(s) 155, 323
Bsp1286I GDGCHC 4 cut(s) 140, 393, 435, 774
Bsp143I GATC 5 cut(s) 141, 366, 568, 865, 1249
Bsp19I CCATGG 1 cut(s) 471
BspACI CCGC 2 cut(s) 251, 695
BspANI GGCC 6 cut(s) 74, 110, 522, 538, 638, 1270
BspCNI CTCAG 3 cut(s) 208, 309, 592
BspLI GGNNCC 4 cut(s) 154, 637, 867, 1017
BspMAI CTGCAG 2 cut(s) 291, 1112
BspMI ACCTGC 1 cut(s) 294
BspPI GGATC 4 cut(s) 136, 860, 873, 1244
BspTI CTTAAG 2 cut(s) 377, 1166
BspTNI GGTCTC 2 cut(s) 124, 1321
BsrDI GCAATG 2 cut(s) 756, 1437
BsrFI RCCGGY 1 cut(s) 977
BssAI RCCGGY 1 cut(s) 977
BssECI CCNNGG 5 cut(s) 47, 123, 225, 399, 471
BssMI GATC 5 cut(s) 141, 366, 568, 865, 1249
BssNI GRCGYC 1 cut(s) 230
BssSI CACGAG 1 cut(s) 182
BssT1I CCWWGG 3 cut(s) 225, 399, 471
Bst2BI CACGAG 1 cut(s) 182
Bst2UI CCWGG 6 cut(s) 40, 49, 107, 692, 1332, 1418
Bst4CI ACNGT 2 cut(s) 118, 243
Bst6I CTCTTC 6 cut(s) 657, 675, 1020, 1086, 1113, 1119
BstACI GRCGYC 1 cut(s) 230
BstAFI CTTAAG 2 cut(s) 377, 1166
BstC8I GCNNGC 3 cut(s) 924, 1245, 1272
BstDEI CTNAG 3 cut(s) 195, 317, 600
BstDSI CCRYGG 1 cut(s) 471
BstENI CCTNNNNNAGG 1 cut(s) 761
BstF5I GGATG 5 cut(s) 102, 367, 1274, 1481, 1485
BstH2I RGCGCY 1 cut(s) 68
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 5 cut(s) 144, 369, 571, 868, 1252
BstMAI GTCTC 3 cut(s) 124, 254, 1321
BstMBI GATC 5 cut(s) 141, 366, 568, 865, 1249
BstMCI CGRYCG 1 cut(s) 150
BstMWI GCNNNNNNNGC 8 cut(s) 11, 71, 227, 418, 935, 1267, 1427, 1436
BstNI CCWGG 6 cut(s) 40, 49, 107, 692, 1332, 1418
BstNSI RCATGY 1 cut(s) 814
BstPAI GACNNNNGTC 1 cut(s) 157
BstSCI CCNGG 7 cut(s) 38, 47, 105, 165, 690, 1330, 1416
BstSFI CTRYAG 2 cut(s) 287, 1108
BstV1I GCAGC 7 cut(s) 140, 233, 895, 938, 1087, 1408, 1465
BstV2I GAAGAC 3 cut(s) 341, 788, 1187
BstX2I RGATCY 2 cut(s) 366, 865
BstXI CCANNNNNNTGG 1 cut(s) 106
BstYI RGATCY 2 cut(s) 366, 865
Bsu36I CCTNAGG 1 cut(s) 600
BsuRI GGCC 6 cut(s) 74, 110, 522, 538, 638, 1270
BtgI CCRYGG 1 cut(s) 471
BtgZI GCGATG 1 cut(s) 525
BtrI CACGTC 1 cut(s) 207
BtsCI GGATG 5 cut(s) 102, 367, 1274, 1481, 1485
BtsI GCAGTG 1 cut(s) 9
BtsIMutI CAGTG 2 cut(s) 9, 578
BveI ACCTGC 1 cut(s) 294
Cac8I GCNNGC 3 cut(s) 924, 1245, 1272
CaiI CAGNNNCTG 1 cut(s) 316
CfoI GCGC 1 cut(s) 67
Cfr10I RCCGGY 1 cut(s) 977
Cfr13I GGNCC 6 cut(s) 51, 152, 283, 521, 636, 1016
CseI GACGC 2 cut(s) 219, 271
Csp6I GTAC 1 cut(s) 688
CspAI ACCGGT 1 cut(s) 977
CviAII CATG 4 cut(s) 472, 811, 997, 1148
CviQI GTAC 1 cut(s) 688
DdeI CTNAG 3 cut(s) 195, 317, 600
DpnI GATC 5 cut(s) 143, 368, 570, 867, 1251
DpnII GATC 5 cut(s) 141, 366, 568, 865, 1249
EaeI YGGCCR 1 cut(s) 108
Eam1104I CTCTTC 6 cut(s) 657, 675, 1020, 1086, 1113, 1119
EarI CTCTTC 6 cut(s) 657, 675, 1020, 1086, 1113, 1119
EciI GGCGGA 1 cut(s) 710
Ecl136II GAGCTC 2 cut(s) 391, 433
Eco130I CCWWGG 3 cut(s) 225, 399, 471
Eco147I AGGCCT 1 cut(s) 1270
Eco24I GRGCYC 3 cut(s) 140, 393, 435
Eco31I GGTCTC 2 cut(s) 124, 1321
Eco47I GGWCC 4 cut(s) 51, 152, 283, 1016
Eco53kI GAGCTC 2 cut(s) 391, 433
Eco57I CTGAAG 4 cut(s) 89, 293, 407, 1446
Eco81I CCTNAGG 1 cut(s) 600
Eco88I CYCGRG 2 cut(s) 155, 323
EcoICRI GAGCTC 2 cut(s) 391, 433
EcoNI CCTNNNNNAGG 1 cut(s) 761
EcoO109I RGGNCCY 1 cut(s) 283
EcoRII CCWGG 6 cut(s) 38, 47, 105, 690, 1330, 1416
EcoT14I CCWWGG 3 cut(s) 225, 399, 471
EcoT38I GRGCYC 3 cut(s) 140, 393, 435
ErhI CCWWGG 3 cut(s) 225, 399, 471
Esp3I CGTCTC 1 cut(s) 254
FaeI CATG 4 cut(s) 475, 814, 1000, 1151
FalI AAGNNNNNCTT 2 cut(s) 405, 437
FatI CATG 4 cut(s) 471, 810, 996, 1147
FauNDI CATATG 1 cut(s) 1021
Fnu4HI GCNGC 8 cut(s) 129, 222, 252, 884, 927, 1101, 1422, 1479
FokI GGATG 5 cut(s) 89, 374, 1261, 1468, 1472
FriOI GRGCYC 3 cut(s) 140, 393, 435
Fsp4HI GCNGC 8 cut(s) 129, 222, 252, 884, 927, 1101, 1422, 1479
FspBI CTAG 1 cut(s) 959
GlaI GCGC 1 cut(s) 66
GluI GCNGC 8 cut(s) 129, 222, 252, 884, 927, 1101, 1422, 1479
HaeII RGCGCY 1 cut(s) 68
HaeIII GGCC 6 cut(s) 74, 110, 522, 538, 638, 1270
HapII CCGG 4 cut(s) 111, 150, 167, 978
HgaI GACGC 2 cut(s) 219, 271
HhaI GCGC 1 cut(s) 67
Hin1I GRCGYC 1 cut(s) 230
Hin1II CATG 4 cut(s) 475, 814, 1000, 1151
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HindIII AAGCTT 4 cut(s) 305, 374, 419, 1241
HinfI GANTC 5 cut(s) 158, 395, 577, 1312, 1335
HpaII CCGG 4 cut(s) 111, 150, 167, 978
HphI GGTGA 2 cut(s) 967, 992
Hpy166II GTNNAC 1 cut(s) 909
Hpy188I TCNGA 5 cut(s) 124, 135, 163, 318, 426
Hpy188III TCNNGA 8 cut(s) 145, 277, 325, 370, 407, 436, 959, 1198
Hpy8I GTNNAC 1 cut(s) 909
Hpy99I CGWCG 2 cut(s) 211, 235
HpyCH4III ACNGT 2 cut(s) 118, 243
HpyCH4IV ACGT 1 cut(s) 206
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 71, 227, 418, 935, 1267, 1427, 1436
HpyF3I CTNAG 3 cut(s) 195, 317, 600
HpySE526I ACGT 1 cut(s) 206
Hsp92I GRCGYC 1 cut(s) 230
Hsp92II CATG 4 cut(s) 475, 814, 1000, 1151
HspAI GCGC 1 cut(s) 65
Kzo9I GATC 5 cut(s) 141, 366, 568, 865, 1249
LmnI GCTCC 6 cut(s) 136, 388, 409, 430, 769, 1006
Lsp1109I GCAGC 7 cut(s) 140, 233, 895, 938, 1087, 1408, 1465
LweI GCATC 2 cut(s) 1283, 1490
MaeI CTAG 1 cut(s) 959
MaeII ACGT 1 cut(s) 206
MaeIII GTNAC 1 cut(s) 652
MalI GATC 5 cut(s) 143, 368, 570, 867, 1251
MboI GATC 5 cut(s) 141, 366, 568, 865, 1249
MflI RGATCY 2 cut(s) 366, 865
MhlI GDGCHC 4 cut(s) 140, 393, 435, 774
MluCI AATT 5 cut(s) 15, 449, 483, 815, 1382
MlyI GAGTC 1 cut(s) 167
MmeI TCCRAC 3 cut(s) 186, 1299, 1434
MroXI GAANNNNTTC 2 cut(s) 458, 1155
MseI TTAA 4 cut(s) 378, 612, 1167, 1371
MspCI CTTAAG 2 cut(s) 377, 1166
MspI CCGG 4 cut(s) 111, 150, 167, 978
MspR9I CCNGG 7 cut(s) 40, 49, 107, 167, 692, 1332, 1418
Mva1269I GAATGC 2 cut(s) 476, 940
MvaI CCWGG 6 cut(s) 40, 49, 107, 692, 1332, 1418
MwoI GCNNNNNNNGC 8 cut(s) 11, 71, 227, 418, 935, 1267, 1427, 1436
NciI CCSGG 1 cut(s) 167
NcoI CCATGG 1 cut(s) 471
NdeI CATATG 1 cut(s) 1021
NdeII GATC 5 cut(s) 141, 366, 568, 865, 1249
NlaIII CATG 4 cut(s) 475, 814, 1000, 1151
NlaIV GGNNCC 4 cut(s) 154, 637, 867, 1017
NmuCI GTSAC 1 cut(s) 652
NspI RCATGY 1 cut(s) 814
PaeR7I CTCGAG 1 cut(s) 323
PceI AGGCCT 1 cut(s) 1270
PcsI WCGNNNNNNNCGW 1 cut(s) 251
PctI GAATGC 2 cut(s) 476, 940
PdmI GAANNNNTTC 2 cut(s) 458, 1155
PfeI GAWTC 4 cut(s) 395, 577, 1312, 1335
PflFI GACNNNGTC 1 cut(s) 265
PinAI ACCGGT 1 cut(s) 977
PkrI GCNGC 8 cut(s) 130, 223, 253, 885, 928, 1102, 1423, 1480
PleI GAGTC 1 cut(s) 166
PpsI GAGTC 1 cut(s) 166
PpuMI RGGWCCY 1 cut(s) 283
PshAI GACNNNNGTC 1 cut(s) 157
PsiI TTATAA 1 cut(s) 1443
Psp124BI GAGCTC 2 cut(s) 393, 435
Psp5II RGGWCCY 1 cut(s) 283
Psp6I CCWGG 6 cut(s) 38, 47, 105, 690, 1330, 1416
PspGI CCWGG 6 cut(s) 38, 47, 105, 690, 1330, 1416
PspN4I GGNNCC 4 cut(s) 154, 637, 867, 1017
PspPI GGNCC 6 cut(s) 51, 152, 283, 521, 636, 1016
PspPPI RGGWCCY 1 cut(s) 283
PstI CTGCAG 2 cut(s) 291, 1112
PstNI CAGNNNCTG 1 cut(s) 316
PsuI RGATCY 2 cut(s) 366, 865
PsyI GACNNNGTC 1 cut(s) 265
RsaI GTAC 1 cut(s) 689
RsaNI GTAC 1 cut(s) 688
SacI GAGCTC 2 cut(s) 393, 435
SaqAI TTAA 4 cut(s) 378, 612, 1167, 1371
SatI GCNGC 8 cut(s) 129, 222, 252, 884, 927, 1101, 1422, 1479
Sau3AI GATC 5 cut(s) 141, 366, 568, 865, 1249
Sau96I GGNCC 6 cut(s) 51, 152, 283, 521, 636, 1016
SbfI CCTGCAGG 1 cut(s) 291
SchI GAGTC 1 cut(s) 167
ScrFI CCNGG 7 cut(s) 40, 49, 107, 167, 692, 1332, 1418
SdaI CCTGCAGG 1 cut(s) 291
SduI GDGCHC 4 cut(s) 140, 393, 435, 774
SfaNI GCATC 2 cut(s) 1283, 1490
SfcI CTRYAG 2 cut(s) 287, 1108
Sfr274I CTCGAG 1 cut(s) 323
SgrAI CRCCGGYG 1 cut(s) 977
SinI GGWCC 4 cut(s) 51, 152, 283, 1016
SlaI CTCGAG 1 cut(s) 323
SmlI CTYRAG 4 cut(s) 323, 377, 434, 1166
SmoI CTYRAG 4 cut(s) 323, 377, 434, 1166
Sse8387I CCTGCAGG 1 cut(s) 291
Sse9I AATT 5 cut(s) 15, 449, 483, 815, 1382
SseBI AGGCCT 1 cut(s) 1270
SsiI CCGC 2 cut(s) 251, 695
SspMI CTAG 1 cut(s) 959
SstI GAGCTC 2 cut(s) 393, 435
StuI AGGCCT 1 cut(s) 1270
StyD4I CCNGG 7 cut(s) 38, 47, 105, 165, 690, 1330, 1416
StyI CCWWGG 3 cut(s) 225, 399, 471
TaaI ACNGT 2 cut(s) 118, 243
TaiI ACGT 1 cut(s) 209
TaqI TCGA 7 cut(s) 86, 233, 245, 269, 276, 324, 393
TasI AATT 5 cut(s) 15, 449, 483, 815, 1382
TauI GCSGC 1 cut(s) 254
TfiI GAWTC 4 cut(s) 395, 577, 1312, 1335
Tru1I TTAA 4 cut(s) 378, 612, 1167, 1371
Tru9I TTAA 4 cut(s) 378, 612, 1167, 1371
TscAI CASTG 2 cut(s) 16, 578
TseFI GTSAC 1 cut(s) 652
TseI GCWGC 7 cut(s) 128, 221, 883, 926, 1100, 1421, 1478
Tsp45I GTSAC 1 cut(s) 652
TspDTI ATGAA 5 cut(s) 545, 693, 1038, 1148, 1164
TspGWI ACGGA 2 cut(s) 353, 537
TspRI CASTG 2 cut(s) 16, 578
Tth111I GACNNNGTC 1 cut(s) 265
Vha464I CTTAAG 2 cut(s) 377, 1166
VpaK11BI GGWCC 4 cut(s) 51, 152, 283, 1016
XagI CCTNNNNNAGG 1 cut(s) 761
XbaI TCTAGA 1 cut(s) 958
XceI RCATGY 1 cut(s) 814
XhoI CTCGAG 1 cut(s) 323
XmnI GAANNNNTTC 2 cut(s) 458, 1155
XspI CTAG 1 cut(s) 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.