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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G45900 |
| fragaria_vesca | FvH4_5g24100 FvH4_5g24100 |
| malus_domestica | MD00G1002200.v1.1 MD06G1017100.v1.1 |
| prunus_persica | Prupe.5G019400_v2.0.a1 Prupe.5G019400_v2.0.a1 |
| pyrus_communis | pycom06g01380 pycom16g25530 |
| rosa_chinensis | RchiOBHm_Chr7g0213631 |
| rosa_laevigata | RLG00000002795 |
| rosa_multiflora | Rmu_co8487661.1_g000001 Rmu_sc0008101.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00245730 |
| rosa_rugosa | Rorug07G0143500 Rorug07G0143600 |
| rosa_samantha | Rh7AG276600 Rh7BG270800 Rh7CG295600 Rh7DG282800 |
| rosa_wichuraiana | Rw0G023510 Rw7G023870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1111 |
| AccB1I | GGYRCC | 1 cut(s) | 1111 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 913, 933 |
| AccI | GTMKAC | 1 cut(s) | 69 |
| AccII | CGCG | 3 cut(s) | 575, 653, 1500 |
| AciI | CCGC | 6 cut(s) | 518, 604, 620, 631, 653, 795 |
| AclWI | GGATC | 1 cut(s) | 1193 |
| AcoI | YGGCCR | 4 cut(s) | 783, 915, 1446, 1479 |
| AcsI | RAATTY | 4 cut(s) | 23, 1075, 1250, 1429 |
| AcuI | CTGAAG | 2 cut(s) | 825, 1259 |
| AdeI | CACNNNGTG | 1 cut(s) | 913 |
| AfaI | GTAC | 9 cut(s) | 322, 336, 419, 875, 945, 990, 1113, 1234, 1317 |
| AfeI | AGCGCT | 1 cut(s) | 724 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 576, 913, 933, 1383 |
| AgsI | TTSAA | 8 cut(s) | 400, 734, 962, 1061, 1262, 1414, 1469, 1538 |
| AjnI | CCWGG | 2 cut(s) | 708, 1362 |
| Alw21I | GWGCWC | 2 cut(s) | 416, 498 |
| Alw26I | GTCTC | 3 cut(s) | 12, 526, 1479 |
| AlwI | GGATC | 1 cut(s) | 1193 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1295, 1306 |
| Aor51HI | AGCGCT | 1 cut(s) | 724 |
| AoxI | GGCC | 9 cut(s) | 216, 654, 783, 823, 915, 1134, 1365, 1446, 1479 |
| ApeKI | GCWGC | 1 cut(s) | 634 |
| ApoI | RAATTY | 4 cut(s) | 23, 1075, 1250, 1429 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 15, 47, 803, 835 |
| Asp718I | GGTACC | 1 cut(s) | 1111 |
| AspLEI | GCGC | 1 cut(s) | 725 |
| AspS9I | GGNCC | 1 cut(s) | 655 |
| AsuHPI | GGTGA | 4 cut(s) | 665, 809, 1034, 1361 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 953, 986, 1020, 1053 |
| BalI | TGGCCA | 3 cut(s) | 785, 1448, 1481 |
| BanI | GGYRCC | 1 cut(s) | 1111 |
| BanII | GRGCYC | 2 cut(s) | 416, 498 |
| BbsI | GAAGAC | 2 cut(s) | 215, 816 |
| Bbv12I | GWGCWC | 2 cut(s) | 416, 498 |
| BbvI | GCAGC | 1 cut(s) | 621 |
| BccI | CCATC | 3 cut(s) | 319, 1013, 1303 |
| BceAI | ACGGC | 1 cut(s) | 55 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 482, 516 |
| BciT130I | CCWGG | 2 cut(s) | 710, 1364 |
| BciVI | GTATCC | 2 cut(s) | 1048, 1536 |
| BcoDI | GTCTC | 3 cut(s) | 12, 526, 1479 |
| BfaI | CTAG | 3 cut(s) | 726, 1016, 1521 |
| BfmI | CTRYAG | 1 cut(s) | 476 |
| BfoI | RGCGCY | 1 cut(s) | 726 |
| BfuI | GTATCC | 2 cut(s) | 1048, 1536 |
| BglII | AGATCT | 2 cut(s) | 588, 1462 |
| BisI | GCNGC | 3 cut(s) | 632, 635, 654 |
| BlsI | GCNGC | 3 cut(s) | 633, 636, 655 |
| Bme1390I | CCNGG | 2 cut(s) | 710, 1364 |
| BmgT120I | GGNCC | 1 cut(s) | 655 |
| BmiI | GGNNCC | 3 cut(s) | 93, 1113, 1361 |
| BmrFI | CCNGG | 2 cut(s) | 710, 1364 |
| BmsI | GCATC | 2 cut(s) | 910, 1295 |
| BpiI | GAAGAC | 2 cut(s) | 215, 816 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1197 |
| BsaJI | CCNNGG | 6 cut(s) | 213, 421, 679, 708, 1007, 1107 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1427, 1457 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 576, 913, 933, 1383 |
| Bse1I | ACTGG | 1 cut(s) | 338 |
| Bse3DI | GCAATG | 1 cut(s) | 885 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1197 |
| BseBI | CCWGG | 2 cut(s) | 710, 1364 |
| BseDI | CCNNGG | 6 cut(s) | 213, 421, 679, 708, 1007, 1107 |
| BseGI | GGATG | 3 cut(s) | 865, 946, 1419 |
| BseJI | GATNNNNATC | 1 cut(s) | 1197 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 576, 913, 933, 1383 |
| BseMI | GCAATG | 1 cut(s) | 885 |
| BseMII | CTCAG | 3 cut(s) | 250, 419, 1231 |
| BseNI | ACTGG | 1 cut(s) | 338 |
| BseRI | GAGGAG | 2 cut(s) | 638, 818 |
| BseXI | GCAGC | 1 cut(s) | 621 |
| BsgI | GTGCAG | 2 cut(s) | 1198, 1281 |
| Bsh1236I | CGCG | 3 cut(s) | 575, 653, 1500 |
| BshFI | GGCC | 9 cut(s) | 218, 656, 785, 825, 917, 1136, 1367, 1448, 1481 |
| BshNI | GGYRCC | 1 cut(s) | 1111 |
| BsiHKAI | GWGCWC | 2 cut(s) | 416, 498 |
| BsiWI | CGTACG | 1 cut(s) | 1232 |
| BslFI | GGGAC | 3 cut(s) | 776, 940, 988 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 576, 913, 933, 1383 |
| BsmAI | GTCTC | 3 cut(s) | 12, 526, 1479 |
| BsmBI | CGTCTC | 1 cut(s) | 1479 |
| BsmFI | GGGAC | 3 cut(s) | 776, 940, 988 |
| BsmI | GAATGC | 1 cut(s) | 1191 |
| BsnI | GGCC | 9 cut(s) | 218, 656, 785, 825, 917, 1136, 1367, 1448, 1481 |
| Bsp1286I | GDGCHC | 2 cut(s) | 416, 498 |
| Bsp1407I | TGTACA | 1 cut(s) | 943 |
| Bsp143I | GATC | 7 cut(s) | 542, 588, 645, 1099, 1171, 1198, 1462 |
| Bsp19I | CCATGG | 1 cut(s) | 679 |
| BspACI | CCGC | 6 cut(s) | 518, 604, 620, 631, 653, 795 |
| BspANI | GGCC | 9 cut(s) | 218, 656, 785, 825, 917, 1136, 1367, 1448, 1481 |
| BspCNI | CTCAG | 3 cut(s) | 249, 420, 1230 |
| BspFNI | CGCG | 3 cut(s) | 575, 653, 1500 |
| BspLI | GGNNCC | 3 cut(s) | 93, 1113, 1361 |
| BspPI | GGATC | 1 cut(s) | 1193 |
| BspT107I | GGYRCC | 1 cut(s) | 1111 |
| BsrDI | GCAATG | 1 cut(s) | 885 |
| BsrGI | TGTACA | 1 cut(s) | 943 |
| BsrI | ACTGG | 1 cut(s) | 338 |
| BssECI | CCNNGG | 6 cut(s) | 213, 421, 679, 708, 1007, 1107 |
| BssMI | GATC | 7 cut(s) | 542, 588, 645, 1099, 1171, 1198, 1462 |
| BssNAI | GTATAC | 1 cut(s) | 70 |
| BssT1I | CCWWGG | 5 cut(s) | 213, 421, 679, 1007, 1107 |
| Bst1107I | GTATAC | 1 cut(s) | 70 |
| Bst2UI | CCWGG | 2 cut(s) | 710, 1364 |
| Bst4CI | ACNGT | 6 cut(s) | 115, 155, 948, 1097, 1386, 1490 |
| Bst6I | CTCTTC | 2 cut(s) | 194, 1328 |
| BstAUI | TGTACA | 1 cut(s) | 943 |
| BstC8I | GCNNGC | 6 cut(s) | 494, 516, 598, 618, 787, 1134 |
| BstDEI | CTNAG | 3 cut(s) | 236, 428, 1217 |
| BstDSI | CCRYGG | 1 cut(s) | 679 |
| BstF5I | GGATG | 3 cut(s) | 865, 946, 1419 |
| BstFNI | CGCG | 3 cut(s) | 575, 653, 1500 |
| BstH2I | RGCGCY | 1 cut(s) | 726 |
| BstHHI | GCGC | 1 cut(s) | 725 |
| BstKTI | GATC | 7 cut(s) | 545, 591, 648, 1102, 1174, 1201, 1465 |
| BstMAI | GTCTC | 3 cut(s) | 12, 526, 1479 |
| BstMBI | GATC | 7 cut(s) | 542, 588, 645, 1099, 1171, 1198, 1462 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 617 |
| BstNI | CCWGG | 2 cut(s) | 710, 1364 |
| BstSCI | CCNGG | 2 cut(s) | 708, 1362 |
| BstSFI | CTRYAG | 1 cut(s) | 476 |
| BstUI | CGCG | 3 cut(s) | 575, 653, 1500 |
| BstV1I | GCAGC | 1 cut(s) | 621 |
| BstV2I | GAAGAC | 2 cut(s) | 215, 816 |
| BstX2I | RGATCY | 2 cut(s) | 588, 1462 |
| BstYI | RGATCY | 2 cut(s) | 588, 1462 |
| BstZ17I | GTATAC | 1 cut(s) | 70 |
| BsuI | GTATCC | 2 cut(s) | 1048, 1536 |
| BsuRI | GGCC | 9 cut(s) | 218, 656, 785, 825, 917, 1136, 1367, 1448, 1481 |
| BtgI | CCRYGG | 1 cut(s) | 679 |
| BtsCI | GGATG | 3 cut(s) | 865, 946, 1419 |
| BtsIMutI | CAGTG | 2 cut(s) | 120, 1102 |
| Cac8I | GCNNGC | 6 cut(s) | 494, 516, 598, 618, 787, 1134 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1295, 1306 |
| CfoI | GCGC | 1 cut(s) | 725 |
| Cfr13I | GGNCC | 1 cut(s) | 655 |
| CseI | GACGC | 1 cut(s) | 659 |
| Csp6I | GTAC | 9 cut(s) | 321, 335, 418, 874, 944, 989, 1112, 1233, 1316 |
| CviAII | CATG | 5 cut(s) | 29, 343, 680, 769, 781 |
| CviQI | GTAC | 9 cut(s) | 321, 335, 418, 874, 944, 989, 1112, 1233, 1316 |
| DdeI | CTNAG | 3 cut(s) | 236, 428, 1217 |
| DpnI | GATC | 7 cut(s) | 544, 590, 647, 1101, 1173, 1200, 1464 |
| DpnII | GATC | 7 cut(s) | 542, 588, 645, 1099, 1171, 1198, 1462 |
| DraIII | CACNNNGTG | 1 cut(s) | 913 |
| EaeI | YGGCCR | 4 cut(s) | 783, 915, 1446, 1479 |
| Eam1104I | CTCTTC | 2 cut(s) | 194, 1328 |
| EarI | CTCTTC | 2 cut(s) | 194, 1328 |
| EciI | GGCGGA | 1 cut(s) | 635 |
| Ecl136II | GAGCTC | 2 cut(s) | 414, 496 |
| Eco130I | CCWWGG | 5 cut(s) | 213, 421, 679, 1007, 1107 |
| Eco24I | GRGCYC | 2 cut(s) | 416, 498 |
| Eco47III | AGCGCT | 1 cut(s) | 724 |
| Eco53kI | GAGCTC | 2 cut(s) | 414, 496 |
| Eco57I | CTGAAG | 2 cut(s) | 825, 1259 |
| EcoICRI | GAGCTC | 2 cut(s) | 414, 496 |
| EcoRII | CCWGG | 2 cut(s) | 708, 1362 |
| EcoT14I | CCWWGG | 5 cut(s) | 213, 421, 679, 1007, 1107 |
| EcoT38I | GRGCYC | 2 cut(s) | 416, 498 |
| ErhI | CCWWGG | 5 cut(s) | 213, 421, 679, 1007, 1107 |
| Esp3I | CGTCTC | 1 cut(s) | 1479 |
| FaeI | CATG | 5 cut(s) | 32, 346, 683, 772, 784 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 161, 193 |
| FaqI | GGGAC | 3 cut(s) | 776, 940, 988 |
| FatI | CATG | 5 cut(s) | 28, 342, 679, 768, 780 |
| FauNDI | CATATG | 1 cut(s) | 975 |
| FblI | GTMKAC | 1 cut(s) | 69 |
| Fnu4HI | GCNGC | 3 cut(s) | 632, 635, 654 |
| FokI | GGATG | 3 cut(s) | 872, 953, 1406 |
| FriOI | GRGCYC | 2 cut(s) | 416, 498 |
| Fsp4HI | GCNGC | 3 cut(s) | 632, 635, 654 |
| FspBI | CTAG | 3 cut(s) | 726, 1016, 1521 |
| GlaI | GCGC | 1 cut(s) | 724 |
| GluI | GCNGC | 3 cut(s) | 632, 635, 654 |
| HaeII | RGCGCY | 1 cut(s) | 726 |
| HaeIII | GGCC | 9 cut(s) | 218, 656, 785, 825, 917, 1136, 1367, 1448, 1481 |
| HgaI | GACGC | 1 cut(s) | 659 |
| HhaI | GCGC | 1 cut(s) | 725 |
| Hin1II | CATG | 5 cut(s) | 32, 346, 683, 772, 784 |
| Hin6I | GCGC | 1 cut(s) | 723 |
| HinP1I | GCGC | 1 cut(s) | 723 |
| HindIII | AAGCTT | 1 cut(s) | 404 |
| HphI | GGTGA | 4 cut(s) | 665, 809, 1034, 1361 |
| Hpy166II | GTNNAC | 2 cut(s) | 70, 874 |
| Hpy188I | TCNGA | 4 cut(s) | 239, 429, 1207, 1291 |
| Hpy188III | TCNNGA | 5 cut(s) | 546, 734, 1223, 1423, 1466 |
| Hpy8I | GTNNAC | 2 cut(s) | 70, 874 |
| Hpy99I | CGWCG | 2 cut(s) | 653, 1386 |
| HpyAV | CCTTC | 6 cut(s) | 239, 371, 678, 990, 1125, 1463 |
| HpyCH4III | ACNGT | 6 cut(s) | 115, 155, 948, 1097, 1386, 1490 |
| HpyCH4IV | ACGT | 1 cut(s) | 1282 |
| HpyCH4V | TGCA | 5 cut(s) | 1157, 1179, 1189, 1286, 1298 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 617 |
| HpyF3I | CTNAG | 3 cut(s) | 236, 428, 1217 |
| HpySE526I | ACGT | 1 cut(s) | 1282 |
| Hsp92II | CATG | 5 cut(s) | 32, 346, 683, 772, 784 |
| HspAI | GCGC | 1 cut(s) | 723 |
| KpnI | GGTACC | 1 cut(s) | 1115 |
| Kzo9I | GATC | 7 cut(s) | 542, 588, 645, 1099, 1171, 1198, 1462 |
| LmnI | GCTCC | 1 cut(s) | 460 |
| Lsp1109I | GCAGC | 1 cut(s) | 621 |
| LweI | GCATC | 2 cut(s) | 910, 1295 |
| MaeI | CTAG | 3 cut(s) | 726, 1016, 1521 |
| MaeII | ACGT | 1 cut(s) | 1282 |
| MaeIII | GTNAC | 2 cut(s) | 115, 241 |
| MalI | GATC | 7 cut(s) | 544, 590, 647, 1101, 1173, 1200, 1464 |
| MboI | GATC | 7 cut(s) | 542, 588, 645, 1099, 1171, 1198, 1462 |
| MflI | RGATCY | 2 cut(s) | 588, 1462 |
| MhlI | GDGCHC | 2 cut(s) | 416, 498 |
| MlsI | TGGCCA | 3 cut(s) | 785, 1448, 1481 |
| MluCI | AATT | 9 cut(s) | 23, 103, 666, 1052, 1067, 1075, 1250, 1429, 1452 |
| MluNI | TGGCCA | 3 cut(s) | 785, 1448, 1481 |
| MlyI | GAGTC | 8 cut(s) | 127, 249, 269, 554, 725, 896, 962, 1010 |
| MmeI | TCCRAC | 2 cut(s) | 482, 678 |
| Mox20I | TGGCCA | 3 cut(s) | 785, 1448, 1481 |
| MscI | TGGCCA | 3 cut(s) | 785, 1448, 1481 |
| MslI | CAYNNNNRTG | 1 cut(s) | 678 |
| Msp20I | TGGCCA | 3 cut(s) | 785, 1448, 1481 |
| MspR9I | CCNGG | 2 cut(s) | 710, 1364 |
| Mva1269I | GAATGC | 1 cut(s) | 1191 |
| MvaI | CCWGG | 2 cut(s) | 710, 1364 |
| MvnI | CGCG | 3 cut(s) | 575, 653, 1500 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 617 |
| NcoI | CCATGG | 1 cut(s) | 679 |
| NdeI | CATATG | 1 cut(s) | 975 |
| NdeII | GATC | 7 cut(s) | 542, 588, 645, 1099, 1171, 1198, 1462 |
| NlaIII | CATG | 5 cut(s) | 32, 346, 683, 772, 784 |
| NlaIV | GGNNCC | 3 cut(s) | 93, 1113, 1361 |
| NmuCI | GTSAC | 2 cut(s) | 115, 241 |
| PctI | GAATGC | 1 cut(s) | 1191 |
| PfeI | GAWTC | 4 cut(s) | 730, 1025, 1262, 1394 |
| Pfl23II | CGTACG | 1 cut(s) | 1232 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 913, 933 |
| PkrI | GCNGC | 3 cut(s) | 633, 636, 655 |
| PleI | GAGTC | 8 cut(s) | 127, 248, 269, 554, 724, 896, 961, 1009 |
| PpsI | GAGTC | 8 cut(s) | 127, 248, 269, 554, 724, 896, 961, 1009 |
| Psp124BI | GAGCTC | 2 cut(s) | 416, 498 |
| Psp6I | CCWGG | 2 cut(s) | 708, 1362 |
| PspGI | CCWGG | 2 cut(s) | 708, 1362 |
| PspLI | CGTACG | 1 cut(s) | 1232 |
| PspN4I | GGNNCC | 3 cut(s) | 93, 1113, 1361 |
| PspPI | GGNCC | 1 cut(s) | 655 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1295, 1306 |
| PsuI | RGATCY | 2 cut(s) | 588, 1462 |
| RsaI | GTAC | 9 cut(s) | 322, 336, 419, 875, 945, 990, 1113, 1234, 1317 |
| RsaNI | GTAC | 9 cut(s) | 321, 335, 418, 874, 944, 989, 1112, 1233, 1316 |
| RseI | CAYNNNNRTG | 1 cut(s) | 678 |
| SacI | GAGCTC | 2 cut(s) | 416, 498 |
| SatI | GCNGC | 3 cut(s) | 632, 635, 654 |
| Sau3AI | GATC | 7 cut(s) | 542, 588, 645, 1099, 1171, 1198, 1462 |
| Sau96I | GGNCC | 1 cut(s) | 655 |
| SchI | GAGTC | 8 cut(s) | 127, 249, 269, 554, 725, 896, 962, 1010 |
| ScrFI | CCNGG | 2 cut(s) | 710, 1364 |
| SduI | GDGCHC | 2 cut(s) | 416, 498 |
| SfaNI | GCATC | 2 cut(s) | 910, 1295 |
| SfcI | CTRYAG | 1 cut(s) | 476 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 678 |
| Sse9I | AATT | 9 cut(s) | 23, 103, 666, 1052, 1067, 1075, 1250, 1429, 1452 |
| SsiI | CCGC | 6 cut(s) | 518, 604, 620, 631, 653, 795 |
| SspI | AATATT | 1 cut(s) | 1087 |
| SspMI | CTAG | 3 cut(s) | 726, 1016, 1521 |
| SstI | GAGCTC | 2 cut(s) | 416, 498 |
| StyD4I | CCNGG | 2 cut(s) | 708, 1362 |
| StyI | CCWWGG | 5 cut(s) | 213, 421, 679, 1007, 1107 |
| TaaI | ACNGT | 6 cut(s) | 115, 155, 948, 1097, 1386, 1490 |
| TaiI | ACGT | 1 cut(s) | 1285 |
| TaqI | TCGA | 6 cut(s) | 545, 563, 648, 719, 1028, 1381 |
| TasI | AATT | 9 cut(s) | 23, 103, 666, 1052, 1067, 1075, 1250, 1429, 1452 |
| TatI | WGTACW | 3 cut(s) | 320, 943, 1315 |
| TauI | GCSGC | 2 cut(s) | 634, 656 |
| TfiI | GAWTC | 4 cut(s) | 730, 1025, 1262, 1394 |
| TscAI | CASTG | 2 cut(s) | 120, 1102 |
| TseFI | GTSAC | 2 cut(s) | 115, 241 |
| TseI | GCWGC | 1 cut(s) | 634 |
| Tsp45I | GTSAC | 2 cut(s) | 115, 241 |
| TspDTI | ATGAA | 5 cut(s) | 17, 399, 769, 992, 1107 |
| TspGWI | ACGGA | 1 cut(s) | 322 |
| TspRI | CASTG | 2 cut(s) | 120, 1102 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 913, 933 |
| XapI | RAATTY | 4 cut(s) | 23, 1075, 1250, 1429 |
| XmiI | GTMKAC | 1 cut(s) | 69 |
| XspI | CTAG | 3 cut(s) | 726, 1016, 1521 |