f-box protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67340 |
| fragaria_vesca | FvH4_4g23760 FvH4_5g08330 |
| malus_domestica | MD06G1141800.v1.1 MD13G1119000.v1.1 MD14G1157000.v1.1 MD16G1119400.v1.1 |
| prunus_persica | Prupe.1G225800_v2.0.a1 Prupe.5G151000_v2.0.a1 |
| pyrus_communis | pycom13g10380 pycom14g13050 pycom16g10210 |
| rosa_chinensis | RchiOBHm_Chr4g0430251 RchiOBHm_Chr7g0190191 |
| rosa_laevigata | RLG00000004555 RLG00000006990 |
| rosa_multiflora | Rmu_co8361279.1_g000001 Rmu_sc0001089.1_g000023 Rmu_sc0004886.1_g000017 |
| rosa_roxburghii | Rroxscaffold_3G00264800 Rroxscaffold_5G00372050 |
| rosa_rugosa | Rorug04G0241800 Rorug06G0502800 |
| rosa_samantha | Rh4AG298600 Rh4BG305100 Rh4CG320500 Rh4DG302400 Rh7AG108100 Rh7CG113100 Rh7DG111500 |
| rosa_wichuraiana | Rw4G025880 Rw7G009370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 98 |
| AccB1I | GGYRCC | 2 cut(s) | 296, 924 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 205, 255, 934 |
| AccBSI | CCGCTC | 1 cut(s) | 366 |
| AccI | GTMKAC | 1 cut(s) | 525 |
| AclWI | GGATC | 2 cut(s) | 328, 393 |
| AcoI | YGGCCR | 2 cut(s) | 544, 854 |
| AcvI | CACGTG | 1 cut(s) | 171 |
| AcyI | GRCGYC | 2 cut(s) | 297, 595 |
| AfaI | GTAC | 2 cut(s) | 419, 750 |
| AfeI | AGCGCT | 1 cut(s) | 933 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 205, 255, 409, 604, 621, 657, 751, 771, 934 |
| AflII | CTTAAG | 1 cut(s) | 475 |
| AflIII | ACRYGT | 2 cut(s) | 170, 687 |
| AgeI | ACCGGT | 3 cut(s) | 186, 273, 771 |
| AgsI | TTSAA | 1 cut(s) | 184 |
| AjnI | CCWGG | 2 cut(s) | 555, 609 |
| AluBI | AGCT | 7 cut(s) | 39, 121, 126, 541, 628, 711, 946 |
| AluI | AGCT | 7 cut(s) | 39, 121, 126, 541, 628, 711, 946 |
| Alw21I | GWGCWC | 4 cut(s) | 543, 630, 836, 890 |
| Alw26I | GTCTC | 2 cut(s) | 854, 943 |
| AlwI | GGATC | 2 cut(s) | 328, 393 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 453 |
| Aor51HI | AGCGCT | 1 cut(s) | 933 |
| AoxI | GGCC | 7 cut(s) | 246, 369, 517, 544, 612, 854, 866 |
| ApeKI | GCWGC | 3 cut(s) | 16, 447, 711 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 276, 308 |
| AsiGI | ACCGGT | 3 cut(s) | 186, 273, 771 |
| AspLEI | GCGC | 8 cut(s) | 48, 161, 299, 409, 415, 500, 502, 934 |
| AspS9I | GGNCC | 6 cut(s) | 224, 246, 258, 369, 607, 663 |
| AsuC2I | CCSGG | 1 cut(s) | 43 |
| AsuHPI | GGTGA | 5 cut(s) | 263, 442, 916, 1010, 1055 |
| AsuII | TTCGAA | 1 cut(s) | 458 |
| AvaII | GGWCC | 4 cut(s) | 224, 258, 607, 663 |
| BanI | GGYRCC | 2 cut(s) | 296, 924 |
| BanII | GRGCYC | 2 cut(s) | 543, 630 |
| BauI | CACGAG | 1 cut(s) | 872 |
| BbrPI | CACGTG | 1 cut(s) | 171 |
| Bbv12I | GWGCWC | 4 cut(s) | 543, 630, 836, 890 |
| BbvI | GCAGC | 3 cut(s) | 3, 459, 698 |
| BccI | CCATC | 1 cut(s) | 967 |
| BceAI | ACGGC | 3 cut(s) | 97, 460, 825 |
| BciT130I | CCWGG | 2 cut(s) | 557, 611 |
| BcnI | CCSGG | 1 cut(s) | 43 |
| BcoDI | GTCTC | 2 cut(s) | 854, 943 |
| BfoI | RGCGCY | 5 cut(s) | 49, 162, 300, 416, 935 |
| BfrI | CTTAAG | 1 cut(s) | 475 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 488 |
| BlpI | GCTNAGC | 2 cut(s) | 122, 722 |
| Bme1390I | CCNGG | 3 cut(s) | 43, 557, 611 |
| Bme18I | GGWCC | 4 cut(s) | 224, 258, 607, 663 |
| BmgT120I | GGNCC | 6 cut(s) | 224, 246, 258, 369, 607, 663 |
| BmiI | GGNNCC | 4 cut(s) | 298, 370, 665, 926 |
| BmrFI | CCNGG | 3 cut(s) | 43, 557, 611 |
| BmsI | GCATC | 1 cut(s) | 725 |
| BpmI | CTGGAG | 1 cut(s) | 539 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 122, 722 |
| Bpu14I | TTCGAA | 1 cut(s) | 458 |
| BpuMI | CCSGG | 1 cut(s) | 43 |
| BsaAI | YACGTR | 1 cut(s) | 171 |
| BsaHI | GRCGYC | 2 cut(s) | 297, 595 |
| BsaJI | CCNNGG | 3 cut(s) | 358, 588, 651 |
| BsaWI | WCCGGW | 4 cut(s) | 186, 273, 751, 771 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 617, 647 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 205, 255, 409, 604, 621, 657, 751, 771, 934 |
| Bse118I | RCCGGY | 7 cut(s) | 186, 221, 273, 299, 409, 482, 771 |
| Bse1I | ACTGG | 3 cut(s) | 260, 944, 1029 |
| Bse3DI | GCAATG | 1 cut(s) | 547 |
| BseBI | CCWGG | 2 cut(s) | 557, 611 |
| BseDI | CCNNGG | 3 cut(s) | 358, 588, 651 |
| BseGI | GGATG | 2 cut(s) | 108, 740 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 205, 255, 409, 604, 621, 657, 751, 771, 934 |
| BseMI | GCAATG | 1 cut(s) | 547 |
| BseMII | CTCAG | 4 cut(s) | 46, 136, 713, 938 |
| BseNI | ACTGG | 3 cut(s) | 260, 944, 1029 |
| BsePI | GCGCGC | 1 cut(s) | 498 |
| BseRI | GAGGAG | 3 cut(s) | 118, 1022, 1025 |
| BseX3I | CGGCCG | 1 cut(s) | 854 |
| BseXI | GCAGC | 3 cut(s) | 3, 459, 698 |
| BsgI | GTGCAG | 1 cut(s) | 1049 |
| Bsh1285I | CGRYCG | 1 cut(s) | 857 |
| BshFI | GGCC | 7 cut(s) | 248, 371, 519, 546, 614, 856, 868 |
| BshNI | GGYRCC | 2 cut(s) | 296, 924 |
| BshTI | ACCGGT | 3 cut(s) | 186, 273, 771 |
| BsiEI | CGRYCG | 1 cut(s) | 857 |
| BsiHKAI | GWGCWC | 4 cut(s) | 543, 630, 836, 890 |
| BslFI | GGGAC | 5 cut(s) | 606, 649, 728, 913, 1035 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 205, 255, 409, 604, 621, 657, 751, 771, 934 |
| BsmAI | GTCTC | 2 cut(s) | 854, 943 |
| BsmBI | CGTCTC | 1 cut(s) | 854 |
| BsmFI | GGGAC | 5 cut(s) | 606, 649, 728, 913, 1035 |
| BsmI | GAATGC | 1 cut(s) | 233 |
| BsnI | GGCC | 7 cut(s) | 248, 371, 519, 546, 614, 856, 868 |
| Bsp119I | TTCGAA | 1 cut(s) | 458 |
| Bsp1286I | GDGCHC | 4 cut(s) | 543, 630, 836, 890 |
| Bsp143I | GATC | 4 cut(s) | 94, 148, 333, 398 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 122, 722 |
| BspANI | GGCC | 7 cut(s) | 248, 371, 519, 546, 614, 856, 868 |
| BspCNI | CTCAG | 4 cut(s) | 45, 135, 714, 939 |
| BspHI | TCATGA | 1 cut(s) | 777 |
| BspLI | GGNNCC | 4 cut(s) | 298, 370, 665, 926 |
| BspPI | GGATC | 2 cut(s) | 328, 393 |
| BspT104I | TTCGAA | 1 cut(s) | 458 |
| BspT107I | GGYRCC | 2 cut(s) | 296, 924 |
| BspTI | CTTAAG | 1 cut(s) | 475 |
| BsrBI | CCGCTC | 1 cut(s) | 366 |
| BsrDI | GCAATG | 1 cut(s) | 547 |
| BsrFI | RCCGGY | 7 cut(s) | 186, 221, 273, 299, 409, 482, 771 |
| BsrI | ACTGG | 3 cut(s) | 260, 944, 1029 |
| BssAI | RCCGGY | 7 cut(s) | 186, 221, 273, 299, 409, 482, 771 |
| BssECI | CCNNGG | 3 cut(s) | 358, 588, 651 |
| BssHII | GCGCGC | 1 cut(s) | 498 |
| BssMI | GATC | 4 cut(s) | 94, 148, 333, 398 |
| BssNI | GRCGYC | 2 cut(s) | 297, 595 |
| BssSI | CACGAG | 1 cut(s) | 872 |
| Bst2BI | CACGAG | 1 cut(s) | 872 |
| Bst2UI | CCWGG | 2 cut(s) | 557, 611 |
| Bst4CI | ACNGT | 6 cut(s) | 288, 347, 563, 904, 981, 998 |
| BstACI | GRCGYC | 2 cut(s) | 297, 595 |
| BstAFI | CTTAAG | 1 cut(s) | 475 |
| BstBAI | YACGTR | 1 cut(s) | 171 |
| BstBI | TTCGAA | 1 cut(s) | 458 |
| BstDEI | CTNAG | 4 cut(s) | 32, 122, 722, 947 |
| BstDSI | CCRYGG | 1 cut(s) | 651 |
| BstF5I | GGATG | 2 cut(s) | 108, 740 |
| BstH2I | RGCGCY | 5 cut(s) | 49, 162, 300, 416, 935 |
| BstHHI | GCGC | 8 cut(s) | 48, 161, 299, 409, 415, 500, 502, 934 |
| BstKTI | GATC | 4 cut(s) | 97, 151, 336, 401 |
| BstMAI | GTCTC | 2 cut(s) | 854, 943 |
| BstMBI | GATC | 4 cut(s) | 94, 148, 333, 398 |
| BstMCI | CGRYCG | 1 cut(s) | 857 |
| BstNI | CCWGG | 2 cut(s) | 557, 611 |
| BstSCI | CCNGG | 3 cut(s) | 41, 555, 609 |
| BstV1I | GCAGC | 3 cut(s) | 3, 459, 698 |
| BstX2I | RGATCY | 1 cut(s) | 398 |
| BstYI | RGATCY | 1 cut(s) | 398 |
| BstZI | CGGCCG | 1 cut(s) | 854 |
| BsuRI | GGCC | 7 cut(s) | 248, 371, 519, 546, 614, 856, 868 |
| BtgI | CCRYGG | 1 cut(s) | 651 |
| BtsCI | GGATG | 2 cut(s) | 108, 740 |
| BtsIMutI | CAGTG | 1 cut(s) | 293 |
| CaiI | CAGNNNCTG | 1 cut(s) | 453 |
| CciI | TCATGA | 1 cut(s) | 777 |
| CfoI | GCGC | 8 cut(s) | 48, 161, 299, 409, 415, 500, 502, 934 |
| Cfr10I | RCCGGY | 7 cut(s) | 186, 221, 273, 299, 409, 482, 771 |
| Cfr13I | GGNCC | 6 cut(s) | 224, 246, 258, 369, 607, 663 |
| Cfr42I | CCGCGG | 1 cut(s) | 654 |
| CseI | GACGC | 5 cut(s) | 22, 280, 536, 603, 621 |
| Csp6I | GTAC | 2 cut(s) | 418, 749 |
| CspAI | ACCGGT | 3 cut(s) | 186, 273, 771 |
| CviAII | CATG | 4 cut(s) | 379, 394, 778, 841 |
| CviQI | GTAC | 2 cut(s) | 418, 749 |
| DdeI | CTNAG | 4 cut(s) | 32, 122, 722, 947 |
| DinI | GGCGCC | 1 cut(s) | 298 |
| DpnI | GATC | 4 cut(s) | 96, 150, 335, 400 |
| DpnII | GATC | 4 cut(s) | 94, 148, 333, 398 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 98 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 98 |
| EaeI | YGGCCR | 2 cut(s) | 544, 854 |
| EagI | CGGCCG | 1 cut(s) | 854 |
| Ecl136II | GAGCTC | 2 cut(s) | 541, 628 |
| EclXI | CGGCCG | 1 cut(s) | 854 |
| Eco24I | GRGCYC | 2 cut(s) | 543, 630 |
| Eco47I | GGWCC | 4 cut(s) | 224, 258, 607, 663 |
| Eco47III | AGCGCT | 1 cut(s) | 933 |
| Eco52I | CGGCCG | 1 cut(s) | 854 |
| Eco53kI | GAGCTC | 2 cut(s) | 541, 628 |
| Eco72I | CACGTG | 1 cut(s) | 171 |
| EcoICRI | GAGCTC | 2 cut(s) | 541, 628 |
| EcoO109I | RGGNCCY | 1 cut(s) | 369 |
| EcoRII | CCWGG | 2 cut(s) | 555, 609 |
| EcoT38I | GRGCYC | 2 cut(s) | 543, 630 |
| EgeI | GGCGCC | 1 cut(s) | 298 |
| EheI | GGCGCC | 1 cut(s) | 298 |
| Esp3I | CGTCTC | 1 cut(s) | 854 |
| FaeI | CATG | 4 cut(s) | 382, 397, 781, 844 |
| FaiI | YATR | 5 cut(s) | 380, 395, 779, 824, 842 |
| FaqI | GGGAC | 5 cut(s) | 606, 649, 728, 913, 1035 |
| FatI | CATG | 4 cut(s) | 378, 393, 777, 840 |
| FauI | CCCGC | 5 cut(s) | 359, 772, 805, 842, 890 |
| FblI | GTMKAC | 1 cut(s) | 525 |
| FokI | GGATG | 2 cut(s) | 95, 747 |
| FriOI | GRGCYC | 2 cut(s) | 543, 630 |
| GlaI | GCGC | 8 cut(s) | 47, 160, 298, 408, 414, 499, 501, 933 |
| GsuI | CTGGAG | 1 cut(s) | 539 |
| HaeII | RGCGCY | 5 cut(s) | 49, 162, 300, 416, 935 |
| HaeIII | GGCC | 7 cut(s) | 248, 371, 519, 546, 614, 856, 868 |
| HgaI | GACGC | 5 cut(s) | 22, 280, 536, 603, 621 |
| HhaI | GCGC | 8 cut(s) | 48, 161, 299, 409, 415, 500, 502, 934 |
| Hin1I | GRCGYC | 2 cut(s) | 297, 595 |
| Hin1II | CATG | 4 cut(s) | 382, 397, 781, 844 |
| Hin6I | GCGC | 8 cut(s) | 46, 159, 297, 407, 413, 498, 500, 932 |
| HinP1I | GCGC | 8 cut(s) | 46, 159, 297, 407, 413, 498, 500, 932 |
| HincII | GTYRAC | 2 cut(s) | 526, 994 |
| HindII | GTYRAC | 2 cut(s) | 526, 994 |
| HinfI | GANTC | 4 cut(s) | 195, 263, 433, 570 |
| HphI | GGTGA | 5 cut(s) | 263, 442, 916, 1010, 1055 |
| Hpy166II | GTNNAC | 4 cut(s) | 350, 526, 807, 994 |
| Hpy188I | TCNGA | 6 cut(s) | 35, 70, 148, 262, 329, 338 |
| Hpy188III | TCNNGA | 1 cut(s) | 778 |
| Hpy8I | GTNNAC | 4 cut(s) | 350, 526, 807, 994 |
| Hpy99I | CGWCG | 9 cut(s) | 16, 83, 95, 104, 296, 311, 527, 530, 587 |
| HpyAV | CCTTC | 2 cut(s) | 153, 1034 |
| HpyCH4III | ACNGT | 6 cut(s) | 288, 347, 563, 904, 981, 998 |
| HpyCH4IV | ACGT | 5 cut(s) | 170, 306, 582, 643, 741 |
| HpyCH4V | TGCA | 4 cut(s) | 19, 117, 738, 1030 |
| HpyF3I | CTNAG | 4 cut(s) | 32, 122, 722, 947 |
| HpySE526I | ACGT | 5 cut(s) | 170, 306, 582, 643, 741 |
| Hsp92I | GRCGYC | 2 cut(s) | 297, 595 |
| Hsp92II | CATG | 4 cut(s) | 382, 397, 781, 844 |
| HspAI | GCGC | 8 cut(s) | 46, 159, 297, 407, 413, 498, 500, 932 |
| KasI | GGCGCC | 1 cut(s) | 296 |
| KroI | GCCGGC | 2 cut(s) | 409, 482 |
| KroNI | GCCGGC | 2 cut(s) | 411, 484 |
| KspI | CCGCGG | 1 cut(s) | 654 |
| Kzo9I | GATC | 4 cut(s) | 94, 148, 333, 398 |
| LmnI | GCTCC | 4 cut(s) | 44, 131, 363, 625 |
| Lsp1109I | GCAGC | 3 cut(s) | 3, 459, 698 |
| LweI | GCATC | 1 cut(s) | 725 |
| MaeII | ACGT | 5 cut(s) | 170, 306, 582, 643, 741 |
| MaeIII | GTNAC | 2 cut(s) | 302, 563 |
| MalI | GATC | 4 cut(s) | 96, 150, 335, 400 |
| MbiI | CCGCTC | 1 cut(s) | 366 |
| MboI | GATC | 4 cut(s) | 94, 148, 333, 398 |
| MboII | GAAGA | 3 cut(s) | 67, 472, 639 |
| MflI | RGATCY | 1 cut(s) | 398 |
| MhlI | GDGCHC | 4 cut(s) | 543, 630, 836, 890 |
| MluCI | AATT | 1 cut(s) | 907 |
| MluI | ACGCGT | 1 cut(s) | 687 |
| Mly113I | GGCGCC | 1 cut(s) | 297 |
| MlyI | GAGTC | 2 cut(s) | 189, 579 |
| MmeI | TCCRAC | 2 cut(s) | 48, 1039 |
| MreI | CGCCGGCG | 1 cut(s) | 409 |
| MroNI | GCCGGC | 2 cut(s) | 409, 482 |
| MseI | TTAA | 2 cut(s) | 441, 476 |
| MspA1I | CMGCKG | 3 cut(s) | 450, 653, 711 |
| MspCI | CTTAAG | 1 cut(s) | 475 |
| MspR9I | CCNGG | 3 cut(s) | 43, 557, 611 |
| Mva1269I | GAATGC | 1 cut(s) | 233 |
| MvaI | CCWGG | 2 cut(s) | 557, 611 |
| NaeI | GCCGGC | 2 cut(s) | 411, 484 |
| NarI | GGCGCC | 1 cut(s) | 297 |
| NciI | CCSGG | 1 cut(s) | 43 |
| NdeII | GATC | 4 cut(s) | 94, 148, 333, 398 |
| NgoMIV | GCCGGC | 2 cut(s) | 409, 482 |
| NlaIII | CATG | 4 cut(s) | 382, 397, 781, 844 |
| NlaIV | GGNNCC | 4 cut(s) | 298, 370, 665, 926 |
| NmeAIII | GCCGAG | 3 cut(s) | 495, 522, 613 |
| NspV | TTCGAA | 1 cut(s) | 458 |
| PagI | TCATGA | 1 cut(s) | 777 |
| PauI | GCGCGC | 1 cut(s) | 498 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 87, 99, 380, 522, 534, 738 |
| PctI | GAATGC | 1 cut(s) | 233 |
| PdiI | GCCGGC | 2 cut(s) | 411, 484 |
| PfeI | GAWTC | 2 cut(s) | 263, 433 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 205, 255, 934 |
| PfoI | TCCNGGA | 1 cut(s) | 555 |
| PinAI | ACCGGT | 3 cut(s) | 186, 273, 771 |
| PleI | GAGTC | 2 cut(s) | 189, 578 |
| PluTI | GGCGCC | 1 cut(s) | 300 |
| PmaCI | CACGTG | 1 cut(s) | 171 |
| PmlI | CACGTG | 1 cut(s) | 171 |
| PpsI | GAGTC | 2 cut(s) | 189, 578 |
| Ppu21I | YACGTR | 1 cut(s) | 171 |
| Psp124BI | GAGCTC | 2 cut(s) | 543, 630 |
| Psp6I | CCWGG | 2 cut(s) | 555, 609 |
| PspCI | CACGTG | 1 cut(s) | 171 |
| PspGI | CCWGG | 2 cut(s) | 555, 609 |
| PspN4I | GGNNCC | 4 cut(s) | 298, 370, 665, 926 |
| PspPI | GGNCC | 6 cut(s) | 224, 246, 258, 369, 607, 663 |
| PstNI | CAGNNNCTG | 1 cut(s) | 453 |
| PsuI | RGATCY | 1 cut(s) | 398 |
| PteI | GCGCGC | 1 cut(s) | 498 |
| PvuII | CAGCTG | 1 cut(s) | 711 |
| RsaI | GTAC | 2 cut(s) | 419, 750 |
| RsaNI | GTAC | 2 cut(s) | 418, 749 |
| SacI | GAGCTC | 2 cut(s) | 543, 630 |
| SacII | CCGCGG | 1 cut(s) | 654 |
| SalI | GTCGAC | 1 cut(s) | 524 |
| SaqAI | TTAA | 2 cut(s) | 441, 476 |
| Sau3AI | GATC | 4 cut(s) | 94, 148, 333, 398 |
| Sau96I | GGNCC | 6 cut(s) | 224, 246, 258, 369, 607, 663 |
| SchI | GAGTC | 2 cut(s) | 189, 579 |
| ScrFI | CCNGG | 3 cut(s) | 43, 557, 611 |
| SduI | GDGCHC | 4 cut(s) | 543, 630, 836, 890 |
| SfaNI | GCATC | 1 cut(s) | 725 |
| SfoI | GGCGCC | 1 cut(s) | 298 |
| Sfr303I | CCGCGG | 1 cut(s) | 654 |
| SfuI | TTCGAA | 1 cut(s) | 458 |
| SgrAI | CRCCGGYG | 1 cut(s) | 409 |
| SgrBI | CCGCGG | 1 cut(s) | 654 |
| SgrDI | CGTCGACG | 1 cut(s) | 524 |
| SinI | GGWCC | 4 cut(s) | 224, 258, 607, 663 |
| SmlI | CTYRAG | 1 cut(s) | 475 |
| SmoI | CTYRAG | 1 cut(s) | 475 |
| Sse9I | AATT | 1 cut(s) | 907 |
| SspDI | GGCGCC | 1 cut(s) | 296 |
| SstI | GAGCTC | 2 cut(s) | 543, 630 |
| StyD4I | CCNGG | 3 cut(s) | 41, 555, 609 |
| TaaI | ACNGT | 6 cut(s) | 288, 347, 563, 904, 981, 998 |
| TaiI | ACGT | 5 cut(s) | 173, 309, 585, 646, 744 |
| TaqI | TCGA | 5 cut(s) | 50, 78, 309, 458, 525 |
| TasI | AATT | 1 cut(s) | 907 |
| TatI | WGTACW | 1 cut(s) | 417 |
| TauI | GCSGC | 8 cut(s) | 11, 62, 392, 453, 509, 656, 856, 871 |
| TfiI | GAWTC | 2 cut(s) | 263, 433 |
| Tru1I | TTAA | 2 cut(s) | 441, 476 |
| Tru9I | TTAA | 2 cut(s) | 441, 476 |
| TscAI | CASTG | 1 cut(s) | 293 |
| TseI | GCWGC | 3 cut(s) | 16, 447, 711 |
| TspDTI | ATGAA | 3 cut(s) | 97, 766, 974 |
| TspGWI | ACGGA | 3 cut(s) | 582, 625, 747 |
| TspRI | CASTG | 1 cut(s) | 293 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 205, 255, 934 |
| Vha464I | CTTAAG | 1 cut(s) | 475 |
| VpaK11BI | GGWCC | 4 cut(s) | 224, 258, 607, 663 |
| XmiI | GTMKAC | 1 cut(s) | 525 |