f-box protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67340 |
| fragaria_vesca | FvH4_4g23760 FvH4_5g08330 |
| malus_domestica | MD06G1141800.v1.1 MD13G1119000.v1.1 MD14G1157000.v1.1 MD16G1119400.v1.1 |
| prunus_persica | Prupe.1G225800_v2.0.a1 Prupe.5G151000_v2.0.a1 |
| pyrus_communis | pycom13g10380 pycom14g13050 pycom16g10210 |
| rosa_chinensis | RchiOBHm_Chr4g0430251 RchiOBHm_Chr7g0190191 |
| rosa_laevigata | RLG00000004555 RLG00000006990 |
| rosa_multiflora | Rmu_co8361279.1_g000001 Rmu_sc0001089.1_g000023 Rmu_sc0004886.1_g000017 |
| rosa_roxburghii | Rroxscaffold_3G00264800 Rroxscaffold_5G00372050 |
| rosa_rugosa | Rorug04G0241800 Rorug06G0502800 |
| rosa_samantha | Rh4AG298600 Rh4BG305100 Rh4CG320500 Rh4DG302400 Rh7AG108100 Rh7CG113100 Rh7DG111500 |
| rosa_wichuraiana | Rw4G025880 Rw7G009370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 632 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 89 |
| Acc16I | TGCGCA | 1 cut(s) | 490 |
| AccB1I | GGYRCC | 1 cut(s) | 390 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 246 |
| AccII | CGCG | 9 cut(s) | 400, 471, 495, 521, 528, 611, 623, 677, 907 |
| AclI | AACGTT | 1 cut(s) | 729 |
| AclWI | GGATC | 1 cut(s) | 319 |
| AcoI | YGGCCR | 2 cut(s) | 372, 508 |
| AcvI | CACGTG | 2 cut(s) | 645, 829 |
| AcyI | GRCGYC | 1 cut(s) | 589 |
| AfaI | GTAC | 3 cut(s) | 201, 662, 889 |
| AfeI | AGCGCT | 1 cut(s) | 921 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 246, 387, 645, 648, 852 |
| AflIII | ACRYGT | 2 cut(s) | 398, 675 |
| AgeI | ACCGGT | 2 cut(s) | 177, 759 |
| AgsI | TTSAA | 2 cut(s) | 433, 1016 |
| AjnI | CCWGG | 3 cut(s) | 217, 546, 600 |
| AleI | CACNNNNGTG | 1 cut(s) | 399 |
| AluBI | AGCT | 8 cut(s) | 112, 117, 224, 277, 305, 532, 619, 934 |
| AluI | AGCT | 8 cut(s) | 112, 117, 224, 277, 305, 532, 619, 934 |
| Alw21I | GWGCWC | 4 cut(s) | 534, 621, 824, 878 |
| Alw26I | GTCTC | 2 cut(s) | 580, 842 |
| AlwI | GGATC | 1 cut(s) | 319 |
| Ama87I | CYCGRG | 3 cut(s) | 533, 734, 845 |
| Aor51HI | AGCGCT | 1 cut(s) | 921 |
| AoxI | GGCC | 8 cut(s) | 237, 372, 378, 508, 603, 737, 842, 854 |
| ApeKI | GCWGC | 3 cut(s) | 50, 438, 706 |
| AsiGI | ACCGGT | 2 cut(s) | 177, 759 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 761 |
| AspLEI | GCGC | 9 cut(s) | 290, 362, 406, 473, 491, 497, 523, 613, 922 |
| AspS9I | GGNCC | 7 cut(s) | 215, 249, 463, 651, 737, 745, 843 |
| AsuC2I | CCSGG | 4 cut(s) | 502, 735, 736, 752 |
| AsuHPI | GGTGA | 3 cut(s) | 254, 1016, 1040 |
| AvaI | CYCGRG | 3 cut(s) | 533, 734, 845 |
| AvaII | GGWCC | 5 cut(s) | 215, 249, 463, 651, 745 |
| BalI | TGGCCA | 1 cut(s) | 374 |
| BanI | GGYRCC | 1 cut(s) | 390 |
| BanII | GRGCYC | 3 cut(s) | 507, 534, 621 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 653, 685 |
| BauI | CACGAG | 1 cut(s) | 860 |
| BbrPI | CACGTG | 2 cut(s) | 645, 829 |
| BbsI | GAAGAC | 1 cut(s) | 88 |
| Bbv12I | GWGCWC | 4 cut(s) | 534, 621, 824, 878 |
| BbvCI | CCTCAGC | 2 cut(s) | 812, 935 |
| BbvI | GCAGC | 3 cut(s) | 37, 450, 693 |
| BccI | CCATC | 2 cut(s) | 977, 1001 |
| BceAI | ACGGC | 2 cut(s) | 404, 451 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 318, 352, 848, 882 |
| BciT130I | CCWGG | 3 cut(s) | 219, 548, 602 |
| BcnI | CCSGG | 4 cut(s) | 502, 735, 736, 752 |
| BcoDI | GTCTC | 2 cut(s) | 580, 842 |
| BfaI | CTAG | 2 cut(s) | 30, 974 |
| BfoI | RGCGCY | 3 cut(s) | 291, 363, 923 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 479 |
| BlpI | GCTNAGC | 2 cut(s) | 113, 710 |
| Bme1390I | CCNGG | 7 cut(s) | 219, 502, 548, 602, 735, 736, 752 |
| Bme18I | GGWCC | 5 cut(s) | 215, 249, 463, 651, 745 |
| BmeT110I | CYCGRG | 3 cut(s) | 533, 734, 845 |
| BmgT120I | GGNCC | 7 cut(s) | 215, 249, 463, 651, 737, 745, 843 |
| BmiI | GGNNCC | 3 cut(s) | 392, 448, 653 |
| BmrFI | CCNGG | 7 cut(s) | 219, 502, 548, 602, 735, 736, 752 |
| BpiI | GAAGAC | 1 cut(s) | 88 |
| BpmI | CTGGAG | 1 cut(s) | 530 |
| Bpu10I | CCTNAGC | 2 cut(s) | 812, 935 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 113, 710 |
| BpuEI | CTTGAG | 1 cut(s) | 257 |
| BpuMI | CCSGG | 4 cut(s) | 502, 735, 736, 752 |
| BsaAI | YACGTR | 2 cut(s) | 645, 829 |
| BsaHI | GRCGYC | 1 cut(s) | 589 |
| BsaJI | CCNNGG | 3 cut(s) | 349, 375, 734 |
| BsaWI | WCCGGW | 2 cut(s) | 177, 759 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 246, 387, 645, 648, 852 |
| Bse118I | RCCGGY | 5 cut(s) | 177, 212, 290, 473, 759 |
| Bse1I | ACTGG | 2 cut(s) | 251, 658 |
| Bse3DI | GCAATG | 1 cut(s) | 538 |
| BseBI | CCWGG | 3 cut(s) | 219, 548, 602 |
| BseDI | CCNNGG | 3 cut(s) | 349, 375, 734 |
| BseGI | GGATG | 2 cut(s) | 99, 822 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 246, 387, 645, 648, 852 |
| BseMI | GCAATG | 1 cut(s) | 538 |
| BseMII | CTCAG | 5 cut(s) | 34, 127, 701, 803, 926 |
| BseNI | ACTGG | 2 cut(s) | 251, 658 |
| BseRI | GAGGAG | 1 cut(s) | 109 |
| BseXI | GCAGC | 3 cut(s) | 37, 450, 693 |
| BsgI | GTGCAG | 1 cut(s) | 36 |
| Bsh1236I | CGCG | 9 cut(s) | 400, 471, 495, 521, 528, 611, 623, 677, 907 |
| Bsh1285I | CGRYCG | 1 cut(s) | 963 |
| BshFI | GGCC | 8 cut(s) | 239, 374, 380, 510, 605, 739, 844, 856 |
| BshNI | GGYRCC | 1 cut(s) | 390 |
| BshTI | ACCGGT | 2 cut(s) | 177, 759 |
| BsiEI | CGRYCG | 1 cut(s) | 963 |
| BsiHKAI | GWGCWC | 4 cut(s) | 534, 621, 824, 878 |
| BsiHKCI | CYCGRG | 3 cut(s) | 533, 734, 845 |
| BsiSI | CCGG | 9 cut(s) | 178, 213, 291, 474, 501, 735, 740, 752, 760 |
| BslFI | GGGAC | 2 cut(s) | 597, 637 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 246, 387, 645, 648, 852 |
| BsmAI | GTCTC | 2 cut(s) | 580, 842 |
| BsmBI | CGTCTC | 2 cut(s) | 580, 842 |
| BsmFI | GGGAC | 2 cut(s) | 597, 637 |
| BsnI | GGCC | 8 cut(s) | 239, 374, 380, 510, 605, 739, 844, 856 |
| BsoBI | CYCGRG | 3 cut(s) | 533, 734, 845 |
| Bsp1286I | GDGCHC | 5 cut(s) | 507, 534, 621, 824, 878 |
| Bsp143I | GATC | 4 cut(s) | 85, 139, 324, 960 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 113, 710 |
| Bsp68I | TCGCGA | 1 cut(s) | 623 |
| BspANI | GGCC | 8 cut(s) | 239, 374, 380, 510, 605, 739, 844, 856 |
| BspCNI | CTCAG | 5 cut(s) | 33, 126, 702, 804, 927 |
| BspFNI | CGCG | 9 cut(s) | 400, 471, 495, 521, 528, 611, 623, 677, 907 |
| BspHI | TCATGA | 1 cut(s) | 765 |
| BspLI | GGNNCC | 3 cut(s) | 392, 448, 653 |
| BspPI | GGATC | 1 cut(s) | 319 |
| BspT107I | GGYRCC | 1 cut(s) | 390 |
| BsrDI | GCAATG | 1 cut(s) | 538 |
| BsrFI | RCCGGY | 5 cut(s) | 177, 212, 290, 473, 759 |
| BsrI | ACTGG | 2 cut(s) | 251, 658 |
| BssAI | RCCGGY | 5 cut(s) | 177, 212, 290, 473, 759 |
| BssECI | CCNNGG | 3 cut(s) | 349, 375, 734 |
| BssMI | GATC | 4 cut(s) | 85, 139, 324, 960 |
| BssNI | GRCGYC | 1 cut(s) | 589 |
| BssSI | CACGAG | 1 cut(s) | 860 |
| BssT1I | CCWWGG | 1 cut(s) | 375 |
| Bst2BI | CACGAG | 1 cut(s) | 860 |
| Bst2UI | CCWGG | 3 cut(s) | 219, 548, 602 |
| Bst4CI | ACNGT | 5 cut(s) | 554, 560, 628, 892, 969 |
| BstACI | GRCGYC | 1 cut(s) | 589 |
| BstBAI | YACGTR | 2 cut(s) | 645, 829 |
| BstDEI | CTNAG | 5 cut(s) | 20, 113, 710, 812, 935 |
| BstF5I | GGATG | 2 cut(s) | 99, 822 |
| BstFNI | CGCG | 9 cut(s) | 400, 471, 495, 521, 528, 611, 623, 677, 907 |
| BstH2I | RGCGCY | 3 cut(s) | 291, 363, 923 |
| BstHHI | GCGC | 9 cut(s) | 290, 362, 406, 473, 491, 497, 523, 613, 922 |
| BstKTI | GATC | 4 cut(s) | 88, 142, 327, 963 |
| BstMAI | GTCTC | 2 cut(s) | 580, 842 |
| BstMBI | GATC | 4 cut(s) | 85, 139, 324, 960 |
| BstMCI | CGRYCG | 1 cut(s) | 963 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 50, 114, 236, 380, 444, 479, 488, 497, 529 |
| BstNI | CCWGG | 3 cut(s) | 219, 548, 602 |
| BstNSI | RCATGY | 1 cut(s) | 165 |
| BstSCI | CCNGG | 7 cut(s) | 217, 500, 546, 600, 733, 734, 750 |
| BstUI | CGCG | 9 cut(s) | 400, 471, 495, 521, 528, 611, 623, 677, 907 |
| BstV1I | GCAGC | 3 cut(s) | 37, 450, 693 |
| BstV2I | GAAGAC | 1 cut(s) | 88 |
| BsuRI | GGCC | 8 cut(s) | 239, 374, 380, 510, 605, 739, 844, 856 |
| BtsCI | GGATG | 2 cut(s) | 99, 822 |
| BtsI | GCAGTG | 1 cut(s) | 361 |
| BtsIMutI | CAGTG | 2 cut(s) | 361, 956 |
| BtuMI | TCGCGA | 1 cut(s) | 623 |
| CciI | TCATGA | 1 cut(s) | 765 |
| CfoI | GCGC | 9 cut(s) | 290, 362, 406, 473, 491, 497, 523, 613, 922 |
| Cfr10I | RCCGGY | 5 cut(s) | 177, 212, 290, 473, 759 |
| Cfr13I | GGNCC | 7 cut(s) | 215, 249, 463, 651, 737, 745, 843 |
| Cfr9I | CCCGGG | 1 cut(s) | 734 |
| CseI | GACGC | 2 cut(s) | 527, 597 |
| Csp6I | GTAC | 3 cut(s) | 200, 661, 888 |
| CspAI | ACCGGT | 2 cut(s) | 177, 759 |
| CviAII | CATG | 3 cut(s) | 162, 385, 766 |
| CviQI | GTAC | 3 cut(s) | 200, 661, 888 |
| DdeI | CTNAG | 5 cut(s) | 20, 113, 710, 812, 935 |
| DpnI | GATC | 4 cut(s) | 87, 141, 326, 962 |
| DpnII | GATC | 4 cut(s) | 85, 139, 324, 960 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 89 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 89 |
| EaeI | YGGCCR | 2 cut(s) | 372, 508 |
| EciI | GGCGGA | 3 cut(s) | 554, 628, 1035 |
| Ecl136II | GAGCTC | 2 cut(s) | 532, 619 |
| Eco130I | CCWWGG | 1 cut(s) | 375 |
| Eco24I | GRGCYC | 3 cut(s) | 507, 534, 621 |
| Eco47I | GGWCC | 5 cut(s) | 215, 249, 463, 651, 745 |
| Eco47III | AGCGCT | 1 cut(s) | 921 |
| Eco53kI | GAGCTC | 2 cut(s) | 532, 619 |
| Eco72I | CACGTG | 2 cut(s) | 645, 829 |
| Eco88I | CYCGRG | 3 cut(s) | 533, 734, 845 |
| EcoICRI | GAGCTC | 2 cut(s) | 532, 619 |
| EcoO109I | RGGNCCY | 1 cut(s) | 463 |
| EcoRII | CCWGG | 3 cut(s) | 217, 546, 600 |
| EcoT14I | CCWWGG | 1 cut(s) | 375 |
| EcoT38I | GRGCYC | 3 cut(s) | 507, 534, 621 |
| ErhI | CCWWGG | 1 cut(s) | 375 |
| Esp3I | CGTCTC | 2 cut(s) | 580, 842 |
| FaeI | CATG | 3 cut(s) | 165, 388, 769 |
| FaiI | YATR | 5 cut(s) | 163, 386, 596, 632, 767 |
| FaqI | GGGAC | 2 cut(s) | 597, 637 |
| FatI | CATG | 3 cut(s) | 161, 384, 765 |
| FauI | CCCGC | 2 cut(s) | 711, 830 |
| FokI | GGATG | 2 cut(s) | 86, 829 |
| FriOI | GRGCYC | 3 cut(s) | 507, 534, 621 |
| FspBI | CTAG | 2 cut(s) | 30, 974 |
| FspI | TGCGCA | 1 cut(s) | 490 |
| GlaI | GCGC | 9 cut(s) | 289, 361, 405, 472, 490, 496, 522, 612, 921 |
| GsuI | CTGGAG | 1 cut(s) | 530 |
| HaeII | RGCGCY | 3 cut(s) | 291, 363, 923 |
| HaeIII | GGCC | 8 cut(s) | 239, 374, 380, 510, 605, 739, 844, 856 |
| HapII | CCGG | 9 cut(s) | 178, 213, 291, 474, 501, 735, 740, 752, 760 |
| HgaI | GACGC | 2 cut(s) | 527, 597 |
| HhaI | GCGC | 9 cut(s) | 290, 362, 406, 473, 491, 497, 523, 613, 922 |
| Hin1I | GRCGYC | 1 cut(s) | 589 |
| Hin1II | CATG | 3 cut(s) | 165, 388, 769 |
| Hin6I | GCGC | 9 cut(s) | 288, 360, 404, 471, 489, 495, 521, 611, 920 |
| HinP1I | GCGC | 9 cut(s) | 288, 360, 404, 471, 489, 495, 521, 611, 920 |
| HindIII | AAGCTT | 1 cut(s) | 303 |
| HinfI | GANTC | 2 cut(s) | 254, 424 |
| HpaII | CCGG | 9 cut(s) | 178, 213, 291, 474, 501, 735, 740, 752, 760 |
| HphI | GGTGA | 3 cut(s) | 254, 1016, 1040 |
| Hpy166II | GTNNAC | 1 cut(s) | 748 |
| Hpy188I | TCNGA | 8 cut(s) | 23, 61, 139, 253, 320, 329, 580, 870 |
| Hpy188III | TCNNGA | 3 cut(s) | 30, 622, 766 |
| Hpy8I | GTNNAC | 1 cut(s) | 748 |
| Hpy99I | CGWCG | 5 cut(s) | 74, 95, 521, 591, 628 |
| HpyAV | CCTTC | 3 cut(s) | 454, 763, 1010 |
| HpyCH4III | ACNGT | 5 cut(s) | 554, 560, 628, 892, 969 |
| HpyCH4IV | ACGT | 5 cut(s) | 150, 573, 644, 729, 828 |
| HpyCH4V | TGCA | 4 cut(s) | 53, 108, 165, 726 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 50, 114, 236, 380, 444, 479, 488, 497, 529 |
| HpyF3I | CTNAG | 5 cut(s) | 20, 113, 710, 812, 935 |
| HpySE526I | ACGT | 5 cut(s) | 150, 573, 644, 729, 828 |
| Hsp92I | GRCGYC | 1 cut(s) | 589 |
| Hsp92II | CATG | 3 cut(s) | 165, 388, 769 |
| HspAI | GCGC | 9 cut(s) | 288, 360, 404, 471, 489, 495, 521, 611, 920 |
| KroI | GCCGGC | 1 cut(s) | 473 |
| KroNI | GCCGGC | 1 cut(s) | 475 |
| Kzo9I | GATC | 4 cut(s) | 85, 139, 324, 960 |
| LmnI | GCTCC | 5 cut(s) | 122, 221, 452, 528, 616 |
| Lsp1109I | GCAGC | 3 cut(s) | 37, 450, 693 |
| MaeI | CTAG | 2 cut(s) | 30, 974 |
| MaeII | ACGT | 5 cut(s) | 150, 573, 644, 729, 828 |
| MaeIII | GTNAC | 2 cut(s) | 293, 554 |
| MalI | GATC | 4 cut(s) | 87, 141, 326, 962 |
| MboI | GATC | 4 cut(s) | 85, 139, 324, 960 |
| MboII | GAAGA | 3 cut(s) | 45, 58, 88 |
| MhlI | GDGCHC | 5 cut(s) | 507, 534, 621, 824, 878 |
| MlsI | TGGCCA | 1 cut(s) | 374 |
| MluCI | AATT | 1 cut(s) | 895 |
| MluI | ACGCGT | 2 cut(s) | 398, 675 |
| MluNI | TGGCCA | 1 cut(s) | 374 |
| MlyI | GAGTC | 1 cut(s) | 248 |
| MmeI | TCCRAC | 2 cut(s) | 276, 777 |
| Mox20I | TGGCCA | 1 cut(s) | 374 |
| MreI | CGCCGGCG | 1 cut(s) | 473 |
| MroNI | GCCGGC | 1 cut(s) | 473 |
| MroXI | GAANNNNTTC | 1 cut(s) | 761 |
| MscI | TGGCCA | 1 cut(s) | 374 |
| MseI | TTAA | 1 cut(s) | 173 |
| MslI | CAYNNNNRTG | 1 cut(s) | 399 |
| Msp20I | TGGCCA | 1 cut(s) | 374 |
| MspA1I | CMGCKG | 3 cut(s) | 50, 441, 706 |
| MspI | CCGG | 9 cut(s) | 178, 213, 291, 474, 501, 735, 740, 752, 760 |
| MspR9I | CCNGG | 7 cut(s) | 219, 502, 548, 602, 735, 736, 752 |
| MvaI | CCWGG | 3 cut(s) | 219, 548, 602 |
| MvnI | CGCG | 9 cut(s) | 400, 471, 495, 521, 528, 611, 623, 677, 907 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 50, 114, 236, 380, 444, 479, 488, 497, 529 |
| NaeI | GCCGGC | 1 cut(s) | 475 |
| NciI | CCSGG | 4 cut(s) | 502, 735, 736, 752 |
| NdeII | GATC | 4 cut(s) | 85, 139, 324, 960 |
| NgoMIV | GCCGGC | 1 cut(s) | 473 |
| NlaIII | CATG | 3 cut(s) | 165, 388, 769 |
| NlaIV | GGNNCC | 3 cut(s) | 392, 448, 653 |
| NmeAIII | GCCGAG | 2 cut(s) | 236, 486 |
| NruI | TCGCGA | 1 cut(s) | 623 |
| NsbI | TGCGCA | 1 cut(s) | 490 |
| NspI | RCATGY | 1 cut(s) | 165 |
| OliI | CACNNNNGTG | 1 cut(s) | 399 |
| PagI | TCATGA | 1 cut(s) | 765 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 90, 513, 525 |
| PdiI | GCCGGC | 1 cut(s) | 475 |
| PdmI | GAANNNNTTC | 1 cut(s) | 761 |
| PfeI | GAWTC | 1 cut(s) | 424 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 246 |
| PfoI | TCCNGGA | 2 cut(s) | 217, 546 |
| PinAI | ACCGGT | 2 cut(s) | 177, 759 |
| Ple19I | CGATCG | 1 cut(s) | 963 |
| PleI | GAGTC | 1 cut(s) | 248 |
| PmaCI | CACGTG | 2 cut(s) | 645, 829 |
| PmlI | CACGTG | 2 cut(s) | 645, 829 |
| PpsI | GAGTC | 1 cut(s) | 248 |
| Ppu21I | YACGTR | 2 cut(s) | 645, 829 |
| PpuMI | RGGWCCY | 1 cut(s) | 463 |
| PsiI | TTATAA | 1 cut(s) | 632 |
| Psp124BI | GAGCTC | 2 cut(s) | 534, 621 |
| Psp1406I | AACGTT | 1 cut(s) | 729 |
| Psp5II | RGGWCCY | 1 cut(s) | 463 |
| Psp6I | CCWGG | 3 cut(s) | 217, 546, 600 |
| PspCI | CACGTG | 2 cut(s) | 645, 829 |
| PspGI | CCWGG | 3 cut(s) | 217, 546, 600 |
| PspN4I | GGNNCC | 3 cut(s) | 392, 448, 653 |
| PspPI | GGNCC | 7 cut(s) | 215, 249, 463, 651, 737, 745, 843 |
| PspPPI | RGGWCCY | 1 cut(s) | 463 |
| PvuI | CGATCG | 1 cut(s) | 963 |
| RruI | TCGCGA | 1 cut(s) | 623 |
| RsaI | GTAC | 3 cut(s) | 201, 662, 889 |
| RsaNI | GTAC | 3 cut(s) | 200, 661, 888 |
| RseI | CAYNNNNRTG | 1 cut(s) | 399 |
| SacI | GAGCTC | 2 cut(s) | 534, 621 |
| SaqAI | TTAA | 1 cut(s) | 173 |
| Sau3AI | GATC | 4 cut(s) | 85, 139, 324, 960 |
| Sau96I | GGNCC | 7 cut(s) | 215, 249, 463, 651, 737, 745, 843 |
| SchI | GAGTC | 1 cut(s) | 248 |
| ScrFI | CCNGG | 7 cut(s) | 219, 502, 548, 602, 735, 736, 752 |
| SduI | GDGCHC | 5 cut(s) | 507, 534, 621, 824, 878 |
| SgrAI | CRCCGGYG | 1 cut(s) | 473 |
| SinI | GGWCC | 5 cut(s) | 215, 249, 463, 651, 745 |
| SmaI | CCCGGG | 1 cut(s) | 736 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 399 |
| SmlI | CTYRAG | 1 cut(s) | 272 |
| SmoI | CTYRAG | 1 cut(s) | 272 |
| Sse9I | AATT | 1 cut(s) | 895 |
| SspMI | CTAG | 2 cut(s) | 30, 974 |
| SstI | GAGCTC | 2 cut(s) | 534, 621 |
| StyD4I | CCNGG | 7 cut(s) | 217, 500, 546, 600, 733, 734, 750 |
| StyI | CCWWGG | 1 cut(s) | 375 |
| TaaI | ACNGT | 5 cut(s) | 554, 560, 628, 892, 969 |
| TaiI | ACGT | 5 cut(s) | 153, 576, 647, 732, 831 |
| TaqI | TCGA | 5 cut(s) | 69, 206, 300, 516, 963 |
| TasI | AATT | 1 cut(s) | 895 |
| TauI | GCSGC | 7 cut(s) | 47, 50, 383, 444, 447, 500, 859 |
| TfiI | GAWTC | 1 cut(s) | 424 |
| Tru1I | TTAA | 1 cut(s) | 173 |
| Tru9I | TTAA | 1 cut(s) | 173 |
| TscAI | CASTG | 2 cut(s) | 361, 956 |
| TseI | GCWGC | 3 cut(s) | 50, 438, 706 |
| TspDTI | ATGAA | 3 cut(s) | 88, 754, 782 |
| TspMI | CCCGGG | 1 cut(s) | 734 |
| TspRI | CASTG | 2 cut(s) | 361, 956 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 246 |
| VpaK11BI | GGWCC | 5 cut(s) | 215, 249, 463, 651, 745 |
| XbaI | TCTAGA | 1 cut(s) | 29 |
| XceI | RCATGY | 1 cut(s) | 165 |
| XmaI | CCCGGG | 1 cut(s) | 734 |
| XmnI | GAANNNNTTC | 1 cut(s) | 761 |
| XspI | CTAG | 2 cut(s) | 30, 974 |