Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004321

Physical Location & Seq

Genomic Coordinates Forward (+)

41039780 .. 41042709

Gene Structure 2930 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0241800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGAATCCAAGGAAAAGACAAGCAGTGATCAGAAGCATCAGAGCAAAAGGAGAACAATGGCAGCCCACAGGTCCTTGCCGAATCCGGCAACTTCCAACGGCTTTAGTCATGGAAATTCTCTCCAGGCTCACTCCCAACACTCTCATCAACTGCAGGTGCGTTTGCAAATCATGGCTTTTTGTGATTTCCCACCCTCATTTCAATCGTCTCCTCCATTCAAGATCCCCAATTGGCATCTTGATCCAGACATTTCCTCATCCCATCAGATGGAAAGGGAGGATACTAGAGTTCACCCAGATAGTAGAATGTGCTGCTCCTGATTTGCAGCTAGAGAAGATGAGTTTTCGTCCCAAAGTTAGCATACCGCTTATCGGTGACAAAAAGGGTTTCATTACGAAATATGGTTTGTTAAACTCCTGCAATGGTTTACTTTGCTTGTCTGGACCGAAAAGAAATGATATCTTGTATGTGTGTAATCCAATTTTGGGTGAGTTCATCACCACACCACCTCTTAAAAATGGTATAGACTACCTCGCTTTTAATGGACTTGGTTTTAGTGCTGCTACCAATGAGTACAAAGTGTTAAAGACTTGCCAGGCGAATCAGGCTCAGATATACACCATTGGTACTGGAGTTTGGAGAGACATTGGACAGGCTCCTTTTGGCATTGTGCGGTTTCCGTTTAATGCTGTTCTACATGGAGCTCTTCATTGGGCTACCCAGCATTGGGAGGGTTATGAGTTTATGCATTCCTTCAACTTTGAAACAGAAAAGTTTCAAACAATACCCCCACCTAGCCACTTTGCACCGAAAAGGAAACTTAAAGAGAGGGTAACCTTGGGAGTGCTGGGAGGTTGTCTCCTCTTATGTGCCTTTGAAGATGACAGTAGCAAATTTGATATGTGGGTTATGAAGGATTATGGTGTCCAAGAGTCTTGGACAAAGTTTCTTGTTATTGAAAACTTGAGCCCCACAAGAAGTTTGACACGTGCAGACTATGAACCAATTATGTACTTGAGTAATGGTGAAATCTTAATGTCTTATGGTGCTTCTGCTGTGGTTTGTTATAATCCAGAAACAAAGAGTTTCAAGGAAACTAGTATTGGTCCGATTGGGTTAGGATTTGTCGCTACGGCTTATAGTCCATCCTTTGTTTCACTCTACTATATTTCAAAAGGAGAGGAGGTGGAAAGTGTAAGAGACAATGAGAACTTCAACAAGCTGTTTCGTAAAGGAAGTAGTAGTTCTGCTTGTTCTGGGAGGCCACCCCATAAGTCCACAAAACTCAACCCAGGGTATTGCCAGCCTGTTGTTCAAGAGGGTCTCCCTAGGCCTAGAATCATTACTTCCTCTGTTGCTTCCTCAAAACTCAACCCAGGCTATTGTCCCCCAGCTGTTCAAGAGGGCCTCCCTAACTCTAGAGCCAAAACTTGCTCTGTAAGTCTGGGTTTCACTTTGAGGATTGGGAGTGAATGTGCTATATGTGGTGGGCAATTGGGCTATGTATTCAGAGGTAAAGGATTCGCAATGTGTCAACAATGTTTTGACTCAAGTTCCTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009765 GO:0009768 GO:0009941 GO:0009987 GO:0010287 GO:0015979 GO:0016020 GO:0016168 GO:0019684 GO:0031409 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046906 GO:0048037 GO:0050896 GO:0055035 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00196 map00196

Pfam Domains

Protein Families

Chloroa_b-bind

Protein Analysis

520

Amino Acids

57.89

Weight (kDa)

9.21

Isoelectric Point (pI)

40.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	28 - 66	2.8e-08	F-box-like
F-box	PF00646	30 - 69	6.9e-09	F-box domain
b-prop_At3g26010-like	PF24750	131 - 314	3.2e-07	F-box protein At3g26010-like, beta-propeller
FBA_3	PF08268	135 - 371	2e-22	F-box associated beta propeller domain
FBA_1	PF07734	138 - 360	2.2e-25	F-box associated beta propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67340
fragaria_vesca	FvH4_4g23760 FvH4_5g08330
malus_domestica	MD06G1141800.v1.1 MD13G1119000.v1.1 MD14G1157000.v1.1 MD16G1119400.v1.1
prunus_persica	Prupe.1G225800_v2.0.a1 Prupe.5G151000_v2.0.a1
pyrus_communis	pycom13g10380 pycom14g13050 pycom16g10210
rosa_chinensis	RchiOBHm_Chr4g0430251 RchiOBHm_Chr7g0190191
rosa_laevigata	RLG00000004555 RLG00000006990
rosa_multiflora	Rmu_co8361279.1_g000001 Rmu_sc0001089.1_g000023 Rmu_sc0004886.1_g000017
rosa_roxburghii	Rroxscaffold_3G00264800 Rroxscaffold_5G00372050
rosa_rugosa	Rorug04G0241800 Rorug06G0502800
rosa_samantha	Rh4AG298600 Rh4BG305100 Rh4CG320500 Rh4DG302400 Rh7AG108100 Rh7CG113100 Rh7DG111500
rosa_wichuraiana	Rw4G025880 Rw7G009370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1068
AarI	CACCTGC	1 cut(s)	144
Acc36I	ACCTGC	1 cut(s)	144
AccB7I	CCANNNNNTGG	1 cut(s)	267
AciI	CCGC	2 cut(s)	365, 673
AclWI	GGATC	2 cut(s)	216, 235
AcsI	RAATTY	2 cut(s)	114, 893
AcvI	CACGTG	1 cut(s)	989
AfaI	GTAC	3 cut(s)	575, 628, 1013
AfiI	CCNNNNNNNGG	5 cut(s)	267, 371, 485, 726, 727
AflIII	ACRYGT	1 cut(s)	986
AhlI	ACTAGT	1 cut(s)	1097
AjnI	CCWGG	4 cut(s)	122, 594, 1291, 1375
AjuI	GAANNNNNNNTTGG	2 cut(s)	1086, 1118
AluBI	AGCT	4 cut(s)	328, 704, 1222, 1394
AluI	AGCT	4 cut(s)	328, 704, 1222, 1394
Alw21I	GWGCWC	1 cut(s)	706
Alw26I	GTCTC	5 cut(s)	212, 636, 863, 1194, 1328
AlwI	GGATC	2 cut(s)	216, 235
AoxI	GGCC	3 cut(s)	1262, 1331, 1405
ApeKI	GCWGC	4 cut(s)	61, 311, 325, 560
ApoI	RAATTY	2 cut(s)	114, 893
Asp700I	GAANNNNTTC	1 cut(s)	774
AspA2I	CCTAGG	1 cut(s)	1328
AspS9I	GGNCC	4 cut(s)	71, 443, 1106, 1405
AsuHPI	GGTGA	5 cut(s)	283, 386, 490, 500, 1037
AvaII	GGWCC	3 cut(s)	71, 443, 1106
AvrII	CCTAGG	1 cut(s)	1328
BaeI	ACNNNNGTAYC	4 cut(s)	272, 305, 618, 651
BanII	GRGCYC	2 cut(s)	706, 971
BbrPI	CACGTG	1 cut(s)	989
Bbv12I	GWGCWC	1 cut(s)	706
BbvI	GCAGC	4 cut(s)	73, 298, 337, 547
BccI	CCATC	3 cut(s)	261, 269, 1153
BceAI	ACGGC	2 cut(s)	114, 1149
BciT130I	CCWGG	4 cut(s)	124, 596, 1293, 1377
BciVI	GTATCC	1 cut(s)	273
BclI	TGATCA	1 cut(s)	27
BcoDI	GTCTC	5 cut(s)	212, 636, 863, 1194, 1328
BcuI	ACTAGT	1 cut(s)	1097
BfaI	CTAG	7 cut(s)	284, 329, 795, 1098, 1329, 1335, 1419
BfmI	CTRYAG	1 cut(s)	151
BfuAI	ACCTGC	1 cut(s)	144
BfuI	GTATCC	1 cut(s)	273
BisI	GCNGC	4 cut(s)	62, 312, 326, 561
BlnI	CCTAGG	1 cut(s)	1328
BlsI	GCNGC	4 cut(s)	63, 313, 327, 562
Bme1390I	CCNGG	4 cut(s)	124, 596, 1293, 1377
Bme18I	GGWCC	3 cut(s)	71, 443, 1106
BmgT120I	GGNCC	4 cut(s)	71, 443, 1106, 1405
BmiI	GGNNCC	1 cut(s)	657
BmrFI	CCNGG	4 cut(s)	124, 596, 1293, 1377
BmsI	GCATC	2 cut(s)	45, 243
BplI	GAGNNNNNCTC	2 cut(s)	843, 875
BpmI	CTGGAG	2 cut(s)	106, 651
BpuEI	CTTGAG	3 cut(s)	985, 1036, 1534
BsaAI	YACGTR	1 cut(s)	989
BsaI	GGTCTC	1 cut(s)	1328
BsaJI	CCNNGG	6 cut(s)	8, 837, 1291, 1292, 1328, 1375
BsaXI	ACNNNNNCTCC	4 cut(s)	1170, 1200, 1459, 1489
Bsc4I	CCNNNNNNNGG	5 cut(s)	267, 371, 485, 726, 727
Bse1I	ACTGG	1 cut(s)	634
Bse3DI	GCAATG	2 cut(s)	427, 1533
BseBI	CCWGG	4 cut(s)	124, 596, 1293, 1377
BseDI	CCNNGG	6 cut(s)	8, 837, 1291, 1292, 1328, 1375
BseGI	GGATG	2 cut(s)	256, 1145
BseLI	CCNNNNNNNGG	5 cut(s)	267, 371, 485, 726, 727
BseMI	GCAATG	2 cut(s)	427, 1533
BseMII	CTCAG	1 cut(s)	623
BseNI	ACTGG	1 cut(s)	634
BseRI	GAGGAG	3 cut(s)	200, 851, 1196
BseXI	GCAGC	4 cut(s)	73, 298, 337, 547
BseYI	CCCAGC	3 cut(s)	720, 847, 1390
BsgI	GTGCAG	1 cut(s)	1011
BshFI	GGCC	3 cut(s)	1264, 1333, 1407
BsiHKAI	GWGCWC	1 cut(s)	706
BsiSI	CCGG	1 cut(s)	85
BslFI	GGGAC	2 cut(s)	333, 1371
BslI	CCNNNNNNNGG	5 cut(s)	267, 371, 485, 726, 727
BsmAI	GTCTC	5 cut(s)	212, 636, 863, 1194, 1328
BsmBI	CGTCTC	1 cut(s)	212
BsmFI	GGGAC	2 cut(s)	333, 1371
BsmI	GAATGC	1 cut(s)	748
BsnI	GGCC	3 cut(s)	1264, 1333, 1407
Bso31I	GGTCTC	1 cut(s)	1328
Bsp1286I	GDGCHC	2 cut(s)	706, 971
Bsp143I	GATC	3 cut(s)	27, 221, 240
BspACI	CCGC	2 cut(s)	365, 673
BspANI	GGCC	3 cut(s)	1264, 1333, 1407
BspCNI	CTCAG	1 cut(s)	622
BspLI	GGNNCC	1 cut(s)	657
BspMAI	CTGCAG	1 cut(s)	155
BspMI	ACCTGC	1 cut(s)	144
BspPI	GGATC	2 cut(s)	216, 235
BspQI	GCTCTTC	1 cut(s)	711
BspTNI	GGTCTC	1 cut(s)	1328
BsrDI	GCAATG	2 cut(s)	427, 1533
BsrI	ACTGG	1 cut(s)	634
BssECI	CCNNGG	6 cut(s)	8, 837, 1291, 1292, 1328, 1375
BssMI	GATC	3 cut(s)	27, 221, 240
BssT1I	CCWWGG	3 cut(s)	8, 837, 1328
Bst2UI	CCWGG	4 cut(s)	124, 596, 1293, 1377
Bst4CI	ACNGT	1 cut(s)	887
Bst6I	CTCTTC	1 cut(s)	711
BstBAI	YACGTR	1 cut(s)	989
BstC8I	GCNNGC	1 cut(s)	1304
BstDEI	CTNAG	1 cut(s)	609
BstEII	GGTNACC	1 cut(s)	832
BstF5I	GGATG	2 cut(s)	256, 1145
BstKTI	GATC	3 cut(s)	30, 224, 243
BstMAI	GTCTC	5 cut(s)	212, 636, 863, 1194, 1328
BstMBI	GATC	3 cut(s)	27, 221, 240
BstMWI	GCNNNNNNNGC	1 cut(s)	605
BstNI	CCWGG	4 cut(s)	124, 596, 1293, 1377
BstPI	GGTNACC	1 cut(s)	832
BstSCI	CCNGG	4 cut(s)	122, 594, 1291, 1375
BstSFI	CTRYAG	1 cut(s)	151
BstV1I	GCAGC	4 cut(s)	73, 298, 337, 547
BstX2I	RGATCY	1 cut(s)	221
BstYI	RGATCY	1 cut(s)	221
BsuI	GTATCC	1 cut(s)	273
BsuRI	GGCC	3 cut(s)	1264, 1333, 1407
BtsCI	GGATG	2 cut(s)	256, 1145
BtsI	GCAGTG	1 cut(s)	30
BtsIMutI	CAGTG	1 cut(s)	30
BveI	ACCTGC	1 cut(s)	144
Cac8I	GCNNGC	1 cut(s)	1304
Cfr13I	GGNCC	4 cut(s)	71, 443, 1106, 1405
Csp6I	GTAC	3 cut(s)	574, 627, 1012
CviAII	CATG	3 cut(s)	109, 171, 698
CviQI	GTAC	3 cut(s)	574, 627, 1012
DdeI	CTNAG	1 cut(s)	609
DpnI	GATC	3 cut(s)	29, 223, 242
DpnII	GATC	3 cut(s)	27, 221, 240
Eam1104I	CTCTTC	1 cut(s)	711
EarI	CTCTTC	1 cut(s)	711
Ecl136II	GAGCTC	1 cut(s)	704
Eco130I	CCWWGG	3 cut(s)	8, 837, 1328
Eco147I	AGGCCT	1 cut(s)	1333
Eco24I	GRGCYC	2 cut(s)	706, 971
Eco31I	GGTCTC	1 cut(s)	1328
Eco32I	GATATC	1 cut(s)	460
Eco47I	GGWCC	3 cut(s)	71, 443, 1106
Eco53kI	GAGCTC	1 cut(s)	704
Eco72I	CACGTG	1 cut(s)	989
Eco91I	GGTNACC	1 cut(s)	832
EcoICRI	GAGCTC	1 cut(s)	704
EcoO109I	RGGNCCY	2 cut(s)	71, 1405
EcoO65I	GGTNACC	1 cut(s)	832
EcoRII	CCWGG	4 cut(s)	122, 594, 1291, 1375
EcoRV	GATATC	1 cut(s)	460
EcoT14I	CCWWGG	3 cut(s)	8, 837, 1328
EcoT22I	ATGCAT	1 cut(s)	750
EcoT38I	GRGCYC	2 cut(s)	706, 971
ErhI	CCWWGG	3 cut(s)	8, 837, 1328
Esp3I	CGTCTC	1 cut(s)	212
FaeI	CATG	3 cut(s)	112, 174, 701
FaqI	GGGAC	2 cut(s)	333, 1371
FatI	CATG	3 cut(s)	108, 170, 697
FbaI	TGATCA	1 cut(s)	27
Fnu4HI	GCNGC	4 cut(s)	62, 312, 326, 561
FokI	GGATG	2 cut(s)	243, 1132
FriOI	GRGCYC	2 cut(s)	706, 971
Fsp4HI	GCNGC	4 cut(s)	62, 312, 326, 561
FspBI	CTAG	7 cut(s)	284, 329, 795, 1098, 1329, 1335, 1419
GluI	GCNGC	4 cut(s)	62, 312, 326, 561
GsaI	CCCAGC	3 cut(s)	724, 851, 1394
GsuI	CTGGAG	2 cut(s)	106, 651
HaeIII	GGCC	3 cut(s)	1264, 1333, 1407
HapII	CCGG	1 cut(s)	85
Hin1II	CATG	3 cut(s)	112, 174, 701
HincII	GTYRAC	1 cut(s)	1535
HindII	GTYRAC	1 cut(s)	1535
HinfI	GANTC	7 cut(s)	4, 81, 601, 932, 1338, 1521, 1547
HpaII	CCGG	1 cut(s)	85
HphI	GGTGA	5 cut(s)	283, 386, 490, 500, 1037
Hpy166II	GTNNAC	4 cut(s)	291, 428, 1278, 1535
Hpy188I	TCNGA	6 cut(s)	32, 41, 266, 612, 1110, 1511
Hpy188III	TCNNGA	9 cut(s)	219, 238, 244, 317, 441, 1073, 1316, 1400, 1419
Hpy8I	GTNNAC	4 cut(s)	291, 428, 1278, 1535
HpyAV	CCTTC	2 cut(s)	763, 907
HpyCH4III	ACNGT	1 cut(s)	887
HpyCH4IV	ACGT	1 cut(s)	988
HpyCH4V	TGCA	7 cut(s)	153, 165, 325, 420, 748, 806, 992
HpyF10VI	GCNNNNNNNGC	1 cut(s)	605
HpyF3I	CTNAG	1 cut(s)	609
HpySE526I	ACGT	1 cut(s)	988
Hsp92II	CATG	3 cut(s)	112, 174, 701
Ksp22I	TGATCA	1 cut(s)	27
Kzo9I	GATC	3 cut(s)	27, 221, 240
LguI	GCTCTTC	1 cut(s)	711
LmnI	GCTCC	3 cut(s)	319, 661, 701
Lsp1109I	GCAGC	4 cut(s)	73, 298, 337, 547
LweI	GCATC	2 cut(s)	45, 243
MaeI	CTAG	7 cut(s)	284, 329, 795, 1098, 1329, 1335, 1419
MaeII	ACGT	1 cut(s)	988
MaeIII	GTNAC	2 cut(s)	374, 832
MalI	GATC	3 cut(s)	29, 223, 242
MboI	GATC	3 cut(s)	27, 221, 240
MboII	GAAGA	3 cut(s)	346, 698, 890
MfeI	CAATTG	2 cut(s)	228, 1493
MflI	RGATCY	1 cut(s)	221
MhlI	GDGCHC	2 cut(s)	706, 971
MluCI	AATT	6 cut(s)	114, 228, 480, 893, 1005, 1493
MlyI	GAGTC	2 cut(s)	941, 1541
MmeI	TCCRAC	1 cut(s)	119
Mph1103I	ATGCAT	1 cut(s)	750
MroXI	GAANNNNTTC	1 cut(s)	774
MseI	TTAA	7 cut(s)	410, 513, 540, 584, 684, 822, 1034
MspA1I	CMGCKG	1 cut(s)	1394
MspI	CCGG	1 cut(s)	85
MspR9I	CCNGG	4 cut(s)	124, 596, 1293, 1377
MunI	CAATTG	2 cut(s)	228, 1493
Mva1269I	GAATGC	1 cut(s)	748
MvaI	CCWGG	4 cut(s)	124, 596, 1293, 1377
MwoI	GCNNNNNNNGC	1 cut(s)	605
NdeII	GATC	3 cut(s)	27, 221, 240
NlaIII	CATG	3 cut(s)	112, 174, 701
NlaIV	GGNNCC	1 cut(s)	657
NmuCI	GTSAC	1 cut(s)	374
NsiI	ATGCAT	1 cut(s)	750
PaqCI	CACCTGC	1 cut(s)	144
PasI	CCCWGGG	1 cut(s)	1292
PceI	AGGCCT	1 cut(s)	1333
PciSI	GCTCTTC	1 cut(s)	711
PctI	GAATGC	1 cut(s)	748
PdmI	GAANNNNTTC	1 cut(s)	774
PfeI	GAWTC	5 cut(s)	4, 81, 601, 1338, 1521
PflMI	CCANNNNNTGG	1 cut(s)	267
PkrI	GCNGC	4 cut(s)	63, 313, 327, 562
PleI	GAGTC	2 cut(s)	940, 1541
PmaCI	CACGTG	1 cut(s)	989
PmlI	CACGTG	1 cut(s)	989
PpsI	GAGTC	2 cut(s)	940, 1541
Ppu21I	YACGTR	1 cut(s)	989
PpuMI	RGGWCCY	1 cut(s)	71
PsiI	TTATAA	1 cut(s)	1068
Psp124BI	GAGCTC	1 cut(s)	706
Psp5II	RGGWCCY	1 cut(s)	71
Psp6I	CCWGG	4 cut(s)	122, 594, 1291, 1375
PspCI	CACGTG	1 cut(s)	989
PspEI	GGTNACC	1 cut(s)	832
PspFI	CCCAGC	3 cut(s)	720, 847, 1390
PspGI	CCWGG	4 cut(s)	122, 594, 1291, 1375
PspN4I	GGNNCC	1 cut(s)	657
PspPI	GGNCC	4 cut(s)	71, 443, 1106, 1405
PspPPI	RGGWCCY	1 cut(s)	71
PstI	CTGCAG	1 cut(s)	155
PsuI	RGATCY	1 cut(s)	221
PvuII	CAGCTG	1 cut(s)	1394
RsaI	GTAC	3 cut(s)	575, 628, 1013
RsaNI	GTAC	3 cut(s)	574, 627, 1012
SacI	GAGCTC	1 cut(s)	706
SapI	GCTCTTC	1 cut(s)	711
SaqAI	TTAA	7 cut(s)	410, 513, 540, 584, 684, 822, 1034
SatI	GCNGC	4 cut(s)	62, 312, 326, 561
Sau3AI	GATC	3 cut(s)	27, 221, 240
Sau96I	GGNCC	4 cut(s)	71, 443, 1106, 1405
SchI	GAGTC	2 cut(s)	941, 1541
ScrFI	CCNGG	4 cut(s)	124, 596, 1293, 1377
SduI	GDGCHC	2 cut(s)	706, 971
SfaNI	GCATC	2 cut(s)	45, 243
SfcI	CTRYAG	1 cut(s)	151
SinI	GGWCC	3 cut(s)	71, 443, 1106
SmlI	CTYRAG	3 cut(s)	964, 1015, 1549
SmoI	CTYRAG	3 cut(s)	964, 1015, 1549
SpeI	ACTAGT	1 cut(s)	1097
Sse9I	AATT	6 cut(s)	114, 228, 480, 893, 1005, 1493
SseBI	AGGCCT	1 cut(s)	1333
SsiI	CCGC	2 cut(s)	365, 673
SspMI	CTAG	7 cut(s)	284, 329, 795, 1098, 1329, 1335, 1419
SstI	GAGCTC	1 cut(s)	706
StuI	AGGCCT	1 cut(s)	1333
StyD4I	CCNGG	4 cut(s)	122, 594, 1291, 1375
StyI	CCWWGG	3 cut(s)	8, 837, 1328
TaaI	ACNGT	1 cut(s)	887
TaiI	ACGT	1 cut(s)	991
TaqII	GACCGA	1 cut(s)	460
TasI	AATT	6 cut(s)	114, 228, 480, 893, 1005, 1493
TatI	WGTACW	2 cut(s)	573, 1011
TfiI	GAWTC	5 cut(s)	4, 81, 601, 1338, 1521
Tru1I	TTAA	7 cut(s)	410, 513, 540, 584, 684, 822, 1034
Tru9I	TTAA	7 cut(s)	410, 513, 540, 584, 684, 822, 1034
TscAI	CASTG	1 cut(s)	30
TseFI	GTSAC	1 cut(s)	374
TseI	GCWGC	4 cut(s)	61, 311, 325, 560
Tsp45I	GTSAC	1 cut(s)	374
TspDTI	ATGAA	6 cut(s)	17, 379, 484, 698, 926, 1014
TspGWI	ACGGA	1 cut(s)	669
TspRI	CASTG	1 cut(s)	30
Van91I	CCANNNNNTGG	1 cut(s)	267
VpaK11BI	GGWCC	3 cut(s)	71, 443, 1106
XapI	RAATTY	2 cut(s)	114, 893
XbaI	TCTAGA	1 cut(s)	1418
XmaJI	CCTAGG	1 cut(s)	1328
XmnI	GAANNNNTTC	1 cut(s)	774
XspI	CTAG	7 cut(s)	284, 329, 795, 1098, 1329, 1335, 1419
Zsp2I	ATGCAT	1 cut(s)	750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.