Prupe.1G225800_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
23925410 .. 23927904
2495 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G225800.1

Sequence Viewer

Length: 1218 bp
ATGAGAACAAGGGGTGGGGTTTGCTATCCTAGAGTCGGAGGAGCAGGAGATGTGTGCTTTCAGAAGAAGAGGAAGAAGGACTTCGCCGGAGAACGTTGTGTCTGCCGGAAACGGAATAAACTCTCACCGGAGACAACTACCGGCAGAGAACGCTCCTCCTCCTCCTCTTCGTCGTCGGCGTCGGTCGATTTGTTCGACTCTTTACCCGACGACCTCCTCATTCTAATTCTCTCCAAACTCAGCTCCACCGCCAATTCCCCTTCCGATTTCATCAGCGCCTCGATAACATGCAAGAGATTAAACGGTTTAGCTCTCCATTCTCTGGTGGTCTCCAAAGCTTCACCGAAGACGTTCGTCCTCAAAGCCAAGAACTGGTCCGAGTCGGCTCACCGATTCTTAAAGCTCTGCGCCGATGCCGGCAACGTCGAGGCCTGCTACACTCTCGGCATGATTCGCTTCTATTGTTTGCAAAACCGAGGGAGCGGAGCCTCGCTCATGGCCAAGGCGGCGATTGGCTCTCACGCGCCGGCACTCTACTCGCTCGCTGTCATTCAGTTCAACGGTAGCGGCGGCTCCAAAAACGACAAGGACCTCCGGGCTGGGGTAGCGCTGTGCGCGCGTGCGGCGTTTCTTGGACACATCGACGCGCTGCGCGAGCTCGGCCACTGCCTGCAGGACGGTTACGGAGTCCGTCAAAACATAACGGAAGGGAGACGGTTTCTGGTCCAGGCCAACGCGCGTGAGCTGGCAGCGGTTTTGTCGTCTGCGGCAGCCTCGGGAGTGCCCATGCGGCAGCTGCTGACGTGGACCCCACTCCCGCACCCACATCCTCACCCTCATCCTCAGCTGGGGCACCTGACCGGGTCGGGCTGCCCGCTGCTTAGCGACTTCGGGTGCAACGTGCCCGCTCCAGAGATGCACCCGGCGAACCGGTTTTTGGGAGAGTGGTTCGCCGCTCGGGAGGGTTCGCCTGGACCGGGTTTGAGGCTTTGCTCGCACGTGGGGTGTGGGAGGCCGGAGACTAGGAGGCACGAATTTCGTCGGTGTTCGGTGTGTGGGGCCGTGAACTACTGCTCACGTGCCTGTCAGGCGCTGGATTGGAAGCTGCGCCACAAGGCTGAGTGCGCCGCCGTGGAGAGGTGGGTGGATGAGGAGGGTGATGGTGCTGACGGTGACGGACCTGTCAATGGGGGTGATGACGAAATGGCTGAGAGTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

406

Amino Acids

43.46

Weight (kDa)

8.89

Isoelectric Point (pI)

47.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1181
AccB1I GGYRCC 1 cut(s) 852
AccB7I CCANNNNNTGG 2 cut(s) 322, 372
AccBSI CCGCTC 3 cut(s) 483, 908, 956
AccII CGCG 7 cut(s) 524, 617, 619, 647, 654, 737, 739
AclI AACGTT 1 cut(s) 94
AcoI YGGCCR 2 cut(s) 498, 661
AcsI RAATTY 1 cut(s) 1034
AcvI CACGTG 2 cut(s) 1000, 1079
AcyI GRCGYC 1 cut(s) 179
AfeI AGCGCT 1 cut(s) 609
AfiI CCNNNNNNNGG 9 cut(s) 35, 322, 372, 601, 848, 937, 977, 1137, 1187
AgeI ACCGGT 1 cut(s) 930
AgsI TTSAA 1 cut(s) 559
AjiI CACGTC 1 cut(s) 804
AjnI CCWGG 2 cut(s) 726, 970
AjuI GAANNNNNNNTTGG 2 cut(s) 920, 952
AluBI AGCT 9 cut(s) 243, 311, 338, 403, 658, 745, 796, 847, 1105
AluI AGCT 9 cut(s) 243, 311, 338, 403, 658, 745, 796, 847, 1105
Alw21I GWGCWC 1 cut(s) 660
Alw26I GTCTC 4 cut(s) 125, 334, 706, 1013
AlwNI CAGNNNCTG 2 cut(s) 799, 1093
Ama87I CYCGRG 2 cut(s) 775, 957
Aor51HI AGCGCT 1 cut(s) 609
AoxI GGCC 6 cut(s) 429, 498, 661, 729, 1013, 1059
ApeKI GCWGC 8 cut(s) 649, 749, 770, 793, 796, 870, 877, 1105
ApoI RAATTY 1 cut(s) 1034
AsiGI ACCGGT 1 cut(s) 930
Asp700I GAANNNNTTC 2 cut(s) 80, 350
AspS9I GGNCC 7 cut(s) 375, 589, 724, 807, 974, 1059, 1178
AsuC2I CCSGG 4 cut(s) 596, 862, 923, 978
AsuHPI GGTGA 7 cut(s) 117, 333, 380, 824, 1169, 1184, 1205
AvaI CYCGRG 2 cut(s) 775, 957
AvaII GGWCC 6 cut(s) 375, 589, 724, 807, 974, 1178
BaeGI GKGCMC 3 cut(s) 786, 855, 906
BalI TGGCCA 1 cut(s) 500
BanI GGYRCC 1 cut(s) 852
BanII GRGCYC 1 cut(s) 660
BbrPI CACGTG 2 cut(s) 1000, 1079
BbsI GAAGAC 1 cut(s) 353
Bbv12I GWGCWC 1 cut(s) 660
BbvCI CCTCAGC 1 cut(s) 843
BbvI GCAGC 8 cut(s) 636, 761, 782, 783, 805, 857, 864, 1092
BccI CCATC 1 cut(s) 1154
BceAI ACGGC 2 cut(s) 1046, 1115
BcgI CGANNNNNNTGC 4 cut(s) 519, 553, 1019, 1053
BciT130I CCWGG 2 cut(s) 728, 972
BcnI CCSGG 4 cut(s) 596, 862, 923, 978
BcoDI GTCTC 4 cut(s) 125, 334, 706, 1013
BfaI CTAG 2 cut(s) 30, 1023
BfmI CTRYAG 1 cut(s) 671
BfoI RGCGCY 3 cut(s) 279, 611, 1094
BglI GCCNNNNNGGC 3 cut(s) 506, 790, 1088
BlpI GCTNAGC 1 cut(s) 881
Bme1390I CCNGG 6 cut(s) 596, 728, 862, 923, 972, 978
Bme18I GGWCC 6 cut(s) 375, 589, 724, 807, 974, 1178
BmeT110I CYCGRG 2 cut(s) 775, 957
BmgBI CACGTC 1 cut(s) 804
BmgT120I GGNCC 7 cut(s) 375, 589, 724, 807, 974, 1059, 1178
BmiI GGNNCC 5 cut(s) 487, 574, 809, 854, 1060
BmrFI CCNGG 6 cut(s) 596, 728, 862, 923, 972, 978
BmsI GCATC 2 cut(s) 403, 906
BoxI GACNNNNGTC 1 cut(s) 353
BpiI GAAGAC 1 cut(s) 353
BplI GAGNNNNNCTC 2 cut(s) 477, 509
BpmI CTGGAG 1 cut(s) 894
Bpu10I CCTNAGC 1 cut(s) 843
Bpu1102I GCTNAGC 1 cut(s) 881
BpuMI CCSGG 4 cut(s) 596, 862, 923, 978
BsaAI YACGTR 2 cut(s) 1000, 1079
BsaHI GRCGYC 1 cut(s) 179
BsaI GGTCTC 1 cut(s) 334
BsaJI CCNNGG 4 cut(s) 475, 501, 774, 1131
BsaWI WCCGGW 2 cut(s) 127, 930
Bsc4I CCNNNNNNNGG 9 cut(s) 35, 322, 372, 601, 848, 937, 977, 1137, 1187
Bse118I RCCGGY 4 cut(s) 140, 416, 526, 930
Bse1I ACTGG 1 cut(s) 377
BseBI CCWGG 2 cut(s) 728, 972
BseDI CCNNGG 4 cut(s) 475, 501, 774, 1131
BseGI GGATG 3 cut(s) 826, 838, 1153
BseLI CCNNNNNNNGG 9 cut(s) 35, 322, 372, 601, 848, 937, 977, 1137, 1187
BseMII CTCAG 4 cut(s) 253, 857, 1110, 1200
BseNI ACTGG 1 cut(s) 377
BsePI GCGCGC 1 cut(s) 615
BseRI GAGGAG 7 cut(s) 54, 145, 148, 151, 154, 206, 1166
BseSI GKGCMC 3 cut(s) 786, 855, 906
BseXI GCAGC 8 cut(s) 636, 761, 782, 783, 805, 857, 864, 1092
BseYI CCCAGC 2 cut(s) 599, 847
Bsh1236I CGCG 7 cut(s) 524, 617, 619, 647, 654, 737, 739
Bsh1285I CGRYCG 1 cut(s) 186
BshFI GGCC 6 cut(s) 431, 500, 663, 731, 1015, 1061
BshNI GGYRCC 1 cut(s) 852
BshTI ACCGGT 1 cut(s) 930
BsiEI CGRYCG 1 cut(s) 186
BsiHKAI GWGCWC 1 cut(s) 660
BsiHKCI CYCGRG 2 cut(s) 775, 957
BslI CCNNNNNNNGG 9 cut(s) 35, 322, 372, 601, 848, 937, 977, 1137, 1187
BsmAI GTCTC 4 cut(s) 125, 334, 706, 1013
BsmBI CGTCTC 1 cut(s) 706
BsnI GGCC 6 cut(s) 431, 500, 663, 731, 1015, 1061
Bso31I GGTCTC 1 cut(s) 334
BsoBI CYCGRG 2 cut(s) 775, 957
Bsp1286I GDGCHC 4 cut(s) 660, 786, 855, 906
Bsp1720I GCTNAGC 1 cut(s) 881
BspANI GGCC 6 cut(s) 431, 500, 663, 731, 1015, 1061
BspCNI CTCAG 4 cut(s) 252, 856, 1111, 1201
BspFNI CGCG 7 cut(s) 524, 617, 619, 647, 654, 737, 739
BspLI GGNNCC 5 cut(s) 487, 574, 809, 854, 1060
BspMAI CTGCAG 1 cut(s) 675
BspT107I GGYRCC 1 cut(s) 852
BspTNI GGTCTC 1 cut(s) 334
BsrBI CCGCTC 3 cut(s) 483, 908, 956
BsrFI RCCGGY 4 cut(s) 140, 416, 526, 930
BsrI ACTGG 1 cut(s) 377
BssAI RCCGGY 4 cut(s) 140, 416, 526, 930
BssECI CCNNGG 4 cut(s) 475, 501, 774, 1131
BssHII GCGCGC 1 cut(s) 615
BssNI GRCGYC 1 cut(s) 179
BssT1I CCWWGG 1 cut(s) 501
Bst2UI CCWGG 2 cut(s) 728, 972
Bst4CI ACNGT 5 cut(s) 305, 563, 680, 717, 1172
Bst6I CTCTTC 2 cut(s) 62, 172
BstACI GRCGYC 1 cut(s) 179
BstBAI YACGTR 2 cut(s) 1000, 1079
BstDEI CTNAG 5 cut(s) 239, 843, 881, 1119, 1209
BstDSI CCRYGG 1 cut(s) 1131
BstF5I GGATG 3 cut(s) 826, 838, 1153
BstFNI CGCG 7 cut(s) 524, 617, 619, 647, 654, 737, 739
BstH2I RGCGCY 3 cut(s) 279, 611, 1094
BstMAI GTCTC 4 cut(s) 125, 334, 706, 1013
BstMCI CGRYCG 1 cut(s) 186
BstNI CCWGG 2 cut(s) 728, 972
BstNSI RCATGY 1 cut(s) 291
BstPAI GACNNNNGTC 1 cut(s) 353
BstSCI CCNGG 6 cut(s) 594, 726, 860, 921, 970, 976
BstSFI CTRYAG 1 cut(s) 671
BstSLI GKGCMC 3 cut(s) 786, 855, 906
BstUI CGCG 7 cut(s) 524, 617, 619, 647, 654, 737, 739
BstV1I GCAGC 8 cut(s) 636, 761, 782, 783, 805, 857, 864, 1092
BstV2I GAAGAC 1 cut(s) 353
BsuRI GGCC 6 cut(s) 431, 500, 663, 731, 1015, 1061
BtgI CCRYGG 1 cut(s) 1131
BtrI CACGTC 1 cut(s) 804
BtsCI GGATG 3 cut(s) 826, 838, 1153
BtsI GCAGTG 1 cut(s) 664
BtsIMutI CAGTG 1 cut(s) 664
CaiI CAGNNNCTG 2 cut(s) 799, 1093
Cfr10I RCCGGY 4 cut(s) 140, 416, 526, 930
Cfr13I GGNCC 7 cut(s) 375, 589, 724, 807, 974, 1059, 1178
CseI GACGC 2 cut(s) 168, 653
CspAI ACCGGT 1 cut(s) 930
CviAII CATG 4 cut(s) 288, 448, 496, 787
DdeI CTNAG 5 cut(s) 239, 843, 881, 1119, 1209
DrdI GACNNNNNNGTC 1 cut(s) 1181
DseDI GACNNNNNNGTC 1 cut(s) 1181
EaeI YGGCCR 2 cut(s) 498, 661
Eam1104I CTCTTC 2 cut(s) 62, 172
EarI CTCTTC 2 cut(s) 62, 172
Ecl136II GAGCTC 1 cut(s) 658
Eco130I CCWWGG 1 cut(s) 501
Eco147I AGGCCT 1 cut(s) 431
Eco24I GRGCYC 1 cut(s) 660
Eco31I GGTCTC 1 cut(s) 334
Eco47I GGWCC 6 cut(s) 375, 589, 724, 807, 974, 1178
Eco47III AGCGCT 1 cut(s) 609
Eco53kI GAGCTC 1 cut(s) 658
Eco72I CACGTG 2 cut(s) 1000, 1079
Eco88I CYCGRG 2 cut(s) 775, 957
EcoICRI GAGCTC 1 cut(s) 658
EcoO109I RGGNCCY 1 cut(s) 589
EcoRII CCWGG 2 cut(s) 726, 970
EcoT14I CCWWGG 1 cut(s) 501
EcoT38I GRGCYC 1 cut(s) 660
ErhI CCWWGG 1 cut(s) 501
Esp3I CGTCTC 1 cut(s) 706
FaeI CATG 4 cut(s) 291, 451, 499, 790
FaiI YATR 5 cut(s) 289, 449, 497, 701, 788
FalI AAGNNNNNCTT 2 cut(s) 65, 97
FatI CATG 4 cut(s) 287, 447, 495, 786
FauI CCCGC 3 cut(s) 825, 882, 913
FokI GGATG 3 cut(s) 813, 825, 1160
FriOI GRGCYC 1 cut(s) 660
FspBI CTAG 2 cut(s) 30, 1023
GsaI CCCAGC 2 cut(s) 603, 851
GsuI CTGGAG 1 cut(s) 894
HaeII RGCGCY 3 cut(s) 279, 611, 1094
HaeIII GGCC 6 cut(s) 431, 500, 663, 731, 1015, 1061
HgaI GACGC 2 cut(s) 168, 653
Hin1I GRCGYC 1 cut(s) 179
Hin1II CATG 4 cut(s) 291, 451, 499, 790
HindIII AAGCTT 1 cut(s) 336
HinfI GANTC 6 cut(s) 33, 197, 380, 393, 451, 687
HphI GGTGA 7 cut(s) 117, 333, 380, 824, 1169, 1184, 1205
Hpy166II GTNNAC 2 cut(s) 807, 1066
Hpy188I TCNGA 4 cut(s) 38, 63, 265, 379
Hpy188III TCNNGA 3 cut(s) 777, 911, 959
Hpy8I GTNNAC 2 cut(s) 807, 1066
Hpy99I CGWCG 7 cut(s) 175, 178, 184, 212, 428, 647, 1044
HpyAV CCTTC 3 cut(s) 70, 270, 701
HpyCH4III ACNGT 5 cut(s) 305, 563, 680, 717, 1172
HpyCH4IV ACGT 7 cut(s) 94, 350, 423, 803, 900, 999, 1078
HpyCH4V TGCA 5 cut(s) 291, 469, 673, 897, 919
HpyF3I CTNAG 5 cut(s) 239, 843, 881, 1119, 1209
HpySE526I ACGT 7 cut(s) 94, 350, 423, 803, 900, 999, 1078
Hsp92I GRCGYC 1 cut(s) 179
Hsp92II CATG 4 cut(s) 291, 451, 499, 790
KroI GCCGGC 2 cut(s) 416, 526
KroNI GCCGGC 2 cut(s) 418, 528
LmnI GCTCC 7 cut(s) 41, 158, 248, 480, 485, 578, 913
Lsp1109I GCAGC 8 cut(s) 636, 761, 782, 783, 805, 857, 864, 1092
LweI GCATC 2 cut(s) 403, 906
MaeI CTAG 2 cut(s) 30, 1023
MaeII ACGT 7 cut(s) 94, 350, 423, 803, 900, 999, 1078
MaeIII GTNAC 2 cut(s) 680, 1172
MbiI CCGCTC 3 cut(s) 483, 908, 956
MboII GAAGA 5 cut(s) 76, 79, 85, 159, 358
MhlI GDGCHC 4 cut(s) 660, 786, 855, 906
MlsI TGGCCA 1 cut(s) 500
MluCI AATT 3 cut(s) 225, 253, 1034
MluNI TGGCCA 1 cut(s) 500
MlyI GAGTC 4 cut(s) 42, 191, 389, 696
MmeI TCCRAC 1 cut(s) 16
Mox20I TGGCCA 1 cut(s) 500
MroNI GCCGGC 2 cut(s) 416, 526
MroXI GAANNNNTTC 2 cut(s) 80, 350
MscI TGGCCA 1 cut(s) 500
MseI TTAA 3 cut(s) 299, 398, 1216
Msp20I TGGCCA 1 cut(s) 500
MspA1I CMGCKG 4 cut(s) 752, 796, 847, 877
MspR9I CCNGG 6 cut(s) 596, 728, 862, 923, 972, 978
MteI GCGCNGCGC 1 cut(s) 650
MvaI CCWGG 2 cut(s) 728, 972
MvnI CGCG 7 cut(s) 524, 617, 619, 647, 654, 737, 739
NaeI GCCGGC 2 cut(s) 418, 528
NciI CCSGG 4 cut(s) 596, 862, 923, 978
NgoMIV GCCGGC 2 cut(s) 416, 526
NlaIII CATG 4 cut(s) 291, 451, 499, 790
NlaIV GGNNCC 5 cut(s) 487, 574, 809, 854, 1060
NmeAIII GCCGAG 2 cut(s) 423, 639
NmuCI GTSAC 1 cut(s) 1172
NspI RCATGY 1 cut(s) 291
PauI GCGCGC 1 cut(s) 615
PceI AGGCCT 1 cut(s) 431
PcsI WCGNNNNNNNCGW 4 cut(s) 176, 192, 651, 897
PdiI GCCGGC 2 cut(s) 418, 528
PdmI GAANNNNTTC 2 cut(s) 80, 350
PfeI GAWTC 2 cut(s) 393, 451
PflFI GACNNNGTC 1 cut(s) 862
PflMI CCANNNNNTGG 2 cut(s) 322, 372
PinAI ACCGGT 1 cut(s) 930
PleI GAGTC 4 cut(s) 41, 191, 388, 695
PmaCI CACGTG 2 cut(s) 1000, 1079
PmlI CACGTG 2 cut(s) 1000, 1079
PpsI GAGTC 4 cut(s) 41, 191, 388, 695
Ppu21I YACGTR 2 cut(s) 1000, 1079
PpuMI RGGWCCY 1 cut(s) 589
PshAI GACNNNNGTC 1 cut(s) 353
Psp124BI GAGCTC 1 cut(s) 660
Psp1406I AACGTT 1 cut(s) 94
Psp5II RGGWCCY 1 cut(s) 589
Psp6I CCWGG 2 cut(s) 726, 970
PspCI CACGTG 2 cut(s) 1000, 1079
PspFI CCCAGC 2 cut(s) 599, 847
PspGI CCWGG 2 cut(s) 726, 970
PspN4I GGNNCC 5 cut(s) 487, 574, 809, 854, 1060
PspPI GGNCC 7 cut(s) 375, 589, 724, 807, 974, 1059, 1178
PspPPI RGGWCCY 1 cut(s) 589
PstI CTGCAG 1 cut(s) 675
PstNI CAGNNNCTG 2 cut(s) 799, 1093
PsyI GACNNNGTC 1 cut(s) 862
PteI GCGCGC 1 cut(s) 615
PvuII CAGCTG 2 cut(s) 796, 847
SacI GAGCTC 1 cut(s) 660
SaqAI TTAA 3 cut(s) 299, 398, 1216
Sau96I GGNCC 7 cut(s) 375, 589, 724, 807, 974, 1059, 1178
SbfI CCTGCAGG 1 cut(s) 675
SchI GAGTC 4 cut(s) 42, 191, 389, 696
ScrFI CCNGG 6 cut(s) 596, 728, 862, 923, 972, 978
SdaI CCTGCAGG 1 cut(s) 675
SduI GDGCHC 4 cut(s) 660, 786, 855, 906
SfaNI GCATC 2 cut(s) 403, 906
SfcI CTRYAG 1 cut(s) 671
SinI GGWCC 6 cut(s) 375, 589, 724, 807, 974, 1178
Sse8387I CCTGCAGG 1 cut(s) 675
Sse9I AATT 3 cut(s) 225, 253, 1034
SseBI AGGCCT 1 cut(s) 431
SspMI CTAG 2 cut(s) 30, 1023
SstI GAGCTC 1 cut(s) 660
StuI AGGCCT 1 cut(s) 431
StyD4I CCNGG 6 cut(s) 594, 726, 860, 921, 970, 976
StyI CCWWGG 1 cut(s) 501
TaaI ACNGT 5 cut(s) 305, 563, 680, 717, 1172
TaiI ACGT 7 cut(s) 97, 353, 426, 806, 903, 1002, 1081
TaqI TCGA 5 cut(s) 186, 195, 281, 426, 642
TaqII GACCGA 1 cut(s) 172
TasI AATT 3 cut(s) 225, 253, 1034
TauI GCSGC 8 cut(s) 509, 570, 573, 626, 770, 793, 956, 1130
TfiI GAWTC 2 cut(s) 393, 451
Tru1I TTAA 3 cut(s) 299, 398, 1216
Tru9I TTAA 3 cut(s) 299, 398, 1216
TscAI CASTG 1 cut(s) 671
TseFI GTSAC 1 cut(s) 1172
TseI GCWGC 8 cut(s) 649, 749, 770, 793, 796, 870, 877, 1105
Tsp45I GTSAC 1 cut(s) 1172
TspDTI ATGAA 1 cut(s) 259
TspGWI ACGGA 5 cut(s) 127, 680, 699, 719, 1191
TspRI CASTG 1 cut(s) 671
Tth111I GACNNNGTC 1 cut(s) 862
Van91I CCANNNNNTGG 2 cut(s) 322, 372
VpaK11BI GGWCC 6 cut(s) 375, 589, 724, 807, 974, 1178
XapI RAATTY 1 cut(s) 1034
XceI RCATGY 1 cut(s) 291
XmnI GAANNNNTTC 2 cut(s) 80, 350
XspI CTAG 2 cut(s) 30, 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.