MD06G1186100.v1.1

DnaJ homolog subfamily B member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
32397585 .. 32400106
2522 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1186100.v1.1.491

Sequence Viewer

Length: 1071 bp
ATGGGGGTGGACTACTACAACATACTGAAAGTTAATCGGAACGCGAGCGAGGACGACCTGAAGAAGGCCTACAAGCGGCTCGCCATGATTTGGCACCCGGACAAGAACCCCGCCGGGAAGCGGCCGGAGGCGGAGGCCAAGTTCAAGCAAATCTCCGAGGCCTACGACGTCCTCAGCGACCCCGCCAAGCGCCAGATCTACGACCTCTACGGCGAGGAGGCTCTGAAATCGGGGCAACTTCCGCCTCCCTCTTCTTCCTCCTCCGCCCGCTCCTCCGCCGCTTCGGGCCACCACTACTACGCCAACCACAACAACCAGCGCCACGCACACCCGAATACGTCGTCGTTCACGTTCAGTCCCAGGGACGCCGAGGACATTTACGCCGAGATTTTTGGATCCGACGGCGACGGAGGCGGGATTGGGGGCGGAGGGAGGTATAGAGATGGGTTCTTTAGGACGTCCAATGGTGGTGGGCCAGAGTTTGCGGGACCCAGTGGGGCTGCGCCTGCGAGGAAGGCCAATGCGGTTGAGAATTTGTTGCCCTGCAGCTTGGAGGAGCTCTACAAGGGTGTCAAGAAGAAGATGAAGATTTCCAGAAACGTCTACGATGCCGTTGGTGCTGGTAAGGTTCGGACTGTGGAGGAGATTTTGACCATTGAGATCAGACCAGGTTGGAAGAAGGGCACAAAGATCACCTTCCCTGAGAAGGGTAACCAAGAGCAAGGTGTGATTCCAGCGGATCTAATTTTTATTGTAGACGAGAAACCACACGCACTTTACAAGAGGGACAGTAATGACCTGGTGGTCAACCAGGAGATAACACTGCTGGAGGCACTCACTGGCAAGACTCTTGACCTTACCACCCTAGATGGACGGAATCTCATGATCCCGTTGACTGATATCATCAAACCCGGAGCTGAAATGGTGGTACCAAATGAGGGAATGCCGATCTCAAAAGAACCTGGAAAAAAGGGAAATTTGAGAATCAAGTTTGATGTCAAGTATCCTTCAAGGCTTACCACAGAACAGAAATCTGATCTGAAAAGAGTTCTGGGAGGAGTTTCATTATGA

Protein Analysis

357

Amino Acids

39.02

Weight (kDa)

8.92

Isoelectric Point (pI)

49.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 4 - 68 4.7e-26 DnaJ domain
DnaJ_C PF01556 180 - 336 6e-40 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010652)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 803
AatII GACGTC 2 cut(s) 171, 461
Acc65I GGTACC 1 cut(s) 928
AccB1I GGYRCC 2 cut(s) 93, 928
AccB7I CCANNNNNTGG 1 cut(s) 90
AccBSI CCGCTC 1 cut(s) 270
AccI GTMKAC 2 cut(s) 603, 756
AccII CGCG 1 cut(s) 44
AclWI GGATC 4 cut(s) 390, 403, 747, 880
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 2 cut(s) 532, 976
AcuI CTGAAG 1 cut(s) 80
AcyI GRCGYC 3 cut(s) 168, 366, 458
AfaI GTAC 1 cut(s) 930
AfiI CCNNNNNNNGG 7 cut(s) 64, 75, 90, 120, 706, 707, 938
AgsI TTSAA 2 cut(s) 145, 1011
AjnI CCWGG 5 cut(s) 359, 667, 798, 810, 961
AloI GAACNNNNNNTCC 2 cut(s) 125, 157
AluBI AGCT 3 cut(s) 549, 559, 917
AluI AGCT 3 cut(s) 549, 559, 917
Alw21I GWGCWC 1 cut(s) 561
AlwI GGATC 4 cut(s) 390, 403, 747, 880
AoxI GGCC 7 cut(s) 66, 122, 135, 159, 286, 473, 516
ApeKI GCWGC 2 cut(s) 500, 546
ApoI RAATTY 2 cut(s) 532, 976
ArsI GACNNNNNNTTYG 2 cut(s) 326, 358
Asp718I GGTACC 1 cut(s) 928
AspLEI GCGC 3 cut(s) 192, 321, 505
AspS9I GGNCC 3 cut(s) 286, 473, 488
AsuC2I CCSGG 3 cut(s) 98, 115, 912
AsuHPI GGTGA 1 cut(s) 685
AvaII GGWCC 1 cut(s) 488
BaeGI GKGCMC 1 cut(s) 686
BamHI GGATCC 1 cut(s) 395
BanI GGYRCC 2 cut(s) 93, 928
BanII GRGCYC 1 cut(s) 561
BarI GAAGNNNNNNTAC 2 cut(s) 53, 85
Bbv12I GWGCWC 1 cut(s) 561
BbvCI CCTCAGC 1 cut(s) 173
BbvI GCAGC 2 cut(s) 487, 558
BccI CCATC 2 cut(s) 437, 863
BceAI ACGGC 3 cut(s) 226, 418, 596
BciT130I CCWGG 5 cut(s) 361, 669, 800, 812, 963
BciVI GTATCC 1 cut(s) 1014
BcnI CCSGG 3 cut(s) 98, 115, 912
BfaI CTAG 1 cut(s) 866
BfmI CTRYAG 1 cut(s) 544
BfoI RGCGCY 2 cut(s) 193, 322
BfuI GTATCC 1 cut(s) 1014
BglII AGATCT 1 cut(s) 195
BisI GCNGC 5 cut(s) 77, 122, 279, 501, 547
BlsI GCNGC 5 cut(s) 78, 123, 280, 502, 548
Bme1390I CCNGG 8 cut(s) 98, 115, 361, 669, 800, 812, 912, 963
Bme18I GGWCC 1 cut(s) 488
BmgT120I GGNCC 3 cut(s) 286, 473, 488
BmiI GGNNCC 5 cut(s) 95, 397, 489, 490, 930
BmrFI CCNGG 8 cut(s) 98, 115, 361, 669, 800, 812, 912, 963
BmrI ACTGGG 1 cut(s) 486
BmsI GCATC 1 cut(s) 598
BmuI ACTGGG 1 cut(s) 486
BpmI CTGGAG 1 cut(s) 848
Bpu10I CCTNAGC 1 cut(s) 173
BpuMI CCSGG 3 cut(s) 98, 115, 912
BsaHI GRCGYC 3 cut(s) 168, 366, 458
BsaJI CCNNGG 4 cut(s) 156, 359, 360, 369
BsaXI ACNNNNNCTCC 2 cut(s) 125, 155
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 75, 90, 120, 706, 707, 938
Bse1I ACTGG 2 cut(s) 492, 844
BseBI CCWGG 5 cut(s) 361, 669, 800, 812, 963
BseDI CCNNGG 4 cut(s) 156, 359, 360, 369
BseLI CCNNNNNNNGG 7 cut(s) 64, 75, 90, 120, 706, 707, 938
BseMII CTCAG 2 cut(s) 187, 693
BseNI ACTGG 2 cut(s) 492, 844
BseRI GAGGAG 6 cut(s) 230, 250, 262, 569, 656, 1071
BseSI GKGCMC 1 cut(s) 686
BseX3I CGGCCG 1 cut(s) 122
BseXI GCAGC 2 cut(s) 487, 558
Bsh1236I CGCG 1 cut(s) 44
Bsh1285I CGRYCG 1 cut(s) 125
BshFI GGCC 7 cut(s) 68, 124, 137, 161, 288, 475, 518
BshNI GGYRCC 2 cut(s) 93, 928
BsiEI CGRYCG 1 cut(s) 125
BsiHKAI GWGCWC 1 cut(s) 561
BsiSI CCGG 4 cut(s) 98, 114, 125, 912
BslFI GGGAC 4 cut(s) 342, 377, 501, 800
BslI CCNNNNNNNGG 7 cut(s) 64, 75, 90, 120, 706, 707, 938
BsmFI GGGAC 4 cut(s) 342, 377, 501, 800
BsmI GAATGC 1 cut(s) 948
BsnI GGCC 7 cut(s) 68, 124, 137, 161, 288, 475, 518
Bsp1286I GDGCHC 2 cut(s) 561, 686
Bsp143I GATC 8 cut(s) 195, 395, 660, 690, 739, 885, 948, 1036
BspANI GGCC 7 cut(s) 68, 124, 137, 161, 288, 475, 518
BspCNI CTCAG 2 cut(s) 186, 694
BspFNI CGCG 1 cut(s) 44
BspHI TCATGA 1 cut(s) 882
BspLI GGNNCC 5 cut(s) 95, 397, 489, 490, 930
BspMAI CTGCAG 1 cut(s) 548
BspPI GGATC 4 cut(s) 390, 403, 747, 880
BspT107I GGYRCC 2 cut(s) 93, 928
BsrBI CCGCTC 1 cut(s) 270
BsrI ACTGG 2 cut(s) 492, 844
BssECI CCNNGG 4 cut(s) 156, 359, 360, 369
BssMI GATC 8 cut(s) 195, 395, 660, 690, 739, 885, 948, 1036
BssNI GRCGYC 3 cut(s) 168, 366, 458
Bst2UI CCWGG 5 cut(s) 361, 669, 800, 812, 963
Bst4CI ACNGT 2 cut(s) 637, 791
Bst6I CTCTTC 1 cut(s) 256
BstACI GRCGYC 3 cut(s) 168, 366, 458
BstC8I GCNNGC 4 cut(s) 46, 81, 268, 507
BstDEI CTNAG 2 cut(s) 173, 702
BstEII GGTNACC 1 cut(s) 710
BstENI CCTNNNNNAGG 1 cut(s) 62
BstFNI CGCG 1 cut(s) 44
BstH2I RGCGCY 2 cut(s) 193, 322
BstHHI GCGC 3 cut(s) 192, 321, 505
BstKTI GATC 8 cut(s) 198, 398, 663, 693, 742, 888, 951, 1039
BstMBI GATC 8 cut(s) 195, 395, 660, 690, 739, 885, 948, 1036
BstMCI CGRYCG 1 cut(s) 125
BstMWI GCNNNNNNNGC 5 cut(s) 241, 411, 506, 515, 617
BstNI CCWGG 5 cut(s) 361, 669, 800, 812, 963
BstPI GGTNACC 1 cut(s) 710
BstSCI CCNGG 8 cut(s) 96, 113, 359, 667, 798, 810, 910, 961
BstSFI CTRYAG 1 cut(s) 544
BstSLI GKGCMC 1 cut(s) 686
BstUI CGCG 1 cut(s) 44
BstV1I GCAGC 2 cut(s) 487, 558
BstX2I RGATCY 3 cut(s) 195, 395, 739
BstYI RGATCY 3 cut(s) 195, 395, 739
BstZI CGGCCG 1 cut(s) 122
BsuI GTATCC 1 cut(s) 1014
BsuRI GGCC 7 cut(s) 68, 124, 137, 161, 288, 475, 518
BtsI GCAGTG 1 cut(s) 821
BtsIMutI CAGTG 3 cut(s) 499, 821, 837
Cac8I GCNNGC 4 cut(s) 46, 81, 268, 507
CciI TCATGA 1 cut(s) 882
CfoI GCGC 3 cut(s) 192, 321, 505
Cfr13I GGNCC 3 cut(s) 286, 473, 488
CseI GACGC 1 cut(s) 374
CsiI ACCWGGT 2 cut(s) 667, 798
Csp6I GTAC 1 cut(s) 929
CspCI CAANNNNNGTGG 2 cut(s) 451, 486
CviAII CATG 2 cut(s) 85, 883
CviQI GTAC 1 cut(s) 929
DdeI CTNAG 2 cut(s) 173, 702
DpnI GATC 8 cut(s) 197, 397, 662, 692, 741, 887, 950, 1038
DpnII GATC 8 cut(s) 195, 395, 660, 690, 739, 885, 948, 1036
DrdI GACNNNNNNGTC 1 cut(s) 803
DseDI GACNNNNNNGTC 1 cut(s) 803
EaeI YGGCCR 1 cut(s) 122
EagI CGGCCG 1 cut(s) 122
Eam1104I CTCTTC 1 cut(s) 256
EarI CTCTTC 1 cut(s) 256
EciI GGCGGA 5 cut(s) 146, 231, 253, 265, 441
Ecl136II GAGCTC 1 cut(s) 559
EclXI CGGCCG 1 cut(s) 122
Eco147I AGGCCT 2 cut(s) 68, 161
Eco24I GRGCYC 1 cut(s) 561
Eco32I GATATC 1 cut(s) 901
Eco47I GGWCC 1 cut(s) 488
Eco52I CGGCCG 1 cut(s) 122
Eco53kI GAGCTC 1 cut(s) 559
Eco57I CTGAAG 1 cut(s) 80
Eco91I GGTNACC 1 cut(s) 710
EcoICRI GAGCTC 1 cut(s) 559
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 1 cut(s) 488
EcoO65I GGTNACC 1 cut(s) 710
EcoRII CCWGG 5 cut(s) 359, 667, 798, 810, 961
EcoRV GATATC 1 cut(s) 901
EcoT38I GRGCYC 1 cut(s) 561
FaeI CATG 2 cut(s) 88, 886
FaiI YATR 5 cut(s) 23, 86, 438, 884, 1069
FalI AAGNNNNNCTT 2 cut(s) 680, 712
FaqI GGGAC 4 cut(s) 342, 377, 501, 800
FatI CATG 2 cut(s) 84, 882
FauI CCCGC 5 cut(s) 118, 190, 275, 407, 478
FblI GTMKAC 2 cut(s) 603, 756
Fnu4HI GCNGC 5 cut(s) 77, 122, 279, 501, 547
FriOI GRGCYC 1 cut(s) 561
Fsp4HI GCNGC 5 cut(s) 77, 122, 279, 501, 547
FspBI CTAG 1 cut(s) 866
GlaI GCGC 3 cut(s) 191, 320, 504
GluI GCNGC 5 cut(s) 77, 122, 279, 501, 547
GsuI CTGGAG 1 cut(s) 848
HaeII RGCGCY 2 cut(s) 193, 322
HaeIII GGCC 7 cut(s) 68, 124, 137, 161, 288, 475, 518
HapII CCGG 4 cut(s) 98, 114, 125, 912
HgaI GACGC 1 cut(s) 374
HhaI GCGC 3 cut(s) 192, 321, 505
Hin1I GRCGYC 3 cut(s) 168, 366, 458
Hin1II CATG 2 cut(s) 88, 886
Hin6I GCGC 3 cut(s) 190, 319, 503
HinP1I GCGC 3 cut(s) 190, 319, 503
HincII GTYRAC 2 cut(s) 808, 894
HindII GTYRAC 2 cut(s) 808, 894
HinfI GANTC 4 cut(s) 730, 847, 877, 984
HpaII CCGG 4 cut(s) 98, 114, 125, 912
HphI GGTGA 1 cut(s) 685
Hpy166II GTNNAC 6 cut(s) 10, 348, 604, 757, 808, 894
Hpy188I TCNGA 8 cut(s) 39, 157, 225, 400, 633, 665, 1036, 1041
Hpy188III TCNNGA 4 cut(s) 574, 594, 851, 883
Hpy8I GTNNAC 6 cut(s) 10, 348, 604, 757, 808, 894
Hpy99I CGWCG 5 cut(s) 170, 343, 346, 404, 410
HpyAV CCTTC 6 cut(s) 58, 508, 673, 700, 706, 1017
HpyCH4III ACNGT 2 cut(s) 637, 791
HpyCH4IV ACGT 5 cut(s) 168, 338, 350, 458, 600
HpyCH4V TGCA 1 cut(s) 546
HpyF10VI GCNNNNNNNGC 5 cut(s) 241, 411, 506, 515, 617
HpyF3I CTNAG 2 cut(s) 173, 702
HpySE526I ACGT 5 cut(s) 168, 338, 350, 458, 600
Hsp92I GRCGYC 3 cut(s) 168, 366, 458
Hsp92II CATG 2 cut(s) 88, 886
HspAI GCGC 3 cut(s) 190, 319, 503
KflI GGGWCCC 1 cut(s) 488
KpnI GGTACC 1 cut(s) 932
Kzo9I GATC 8 cut(s) 195, 395, 660, 690, 739, 885, 948, 1036
LmnI GCTCC 3 cut(s) 275, 556, 914
Lsp1109I GCAGC 2 cut(s) 487, 558
LweI GCATC 1 cut(s) 598
MabI ACCWGGT 2 cut(s) 667, 798
MaeI CTAG 1 cut(s) 866
MaeII ACGT 5 cut(s) 168, 338, 350, 458, 600
MaeIII GTNAC 1 cut(s) 710
MalI GATC 8 cut(s) 197, 397, 662, 692, 741, 887, 950, 1038
MbiI CCGCTC 1 cut(s) 270
MboI GATC 8 cut(s) 195, 395, 660, 690, 739, 885, 948, 1036
MboII GAAGA 7 cut(s) 73, 243, 246, 589, 592, 598, 688
MflI RGATCY 3 cut(s) 195, 395, 739
MhlI GDGCHC 2 cut(s) 561, 686
MluCI AATT 3 cut(s) 532, 744, 976
MlyI GAGTC 1 cut(s) 841
MmeI TCCRAC 2 cut(s) 423, 653
MseI TTAA 1 cut(s) 33
MspA1I CMGCKG 1 cut(s) 737
MspI CCGG 4 cut(s) 98, 114, 125, 912
MspR9I CCNGG 8 cut(s) 98, 115, 361, 669, 800, 812, 912, 963
Mva1269I GAATGC 1 cut(s) 948
MvaI CCWGG 5 cut(s) 361, 669, 800, 812, 963
MvnI CGCG 1 cut(s) 44
MwoI GCNNNNNNNGC 5 cut(s) 241, 411, 506, 515, 617
NciI CCSGG 3 cut(s) 98, 115, 912
NdeII GATC 8 cut(s) 195, 395, 660, 690, 739, 885, 948, 1036
NlaIII CATG 2 cut(s) 88, 886
NlaIV GGNNCC 5 cut(s) 95, 397, 489, 490, 930
NmeAIII GCCGAG 2 cut(s) 394, 409
PagI TCATGA 1 cut(s) 882
PasI CCCWGGG 1 cut(s) 360
PceI AGGCCT 2 cut(s) 68, 161
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 347
PctI GAATGC 1 cut(s) 948
PfeI GAWTC 3 cut(s) 730, 877, 984
PflMI CCANNNNNTGG 1 cut(s) 90
PkrI GCNGC 5 cut(s) 78, 123, 280, 502, 548
PleI GAGTC 1 cut(s) 841
PpsI GAGTC 1 cut(s) 841
PpuMI RGGWCCY 1 cut(s) 488
Psp124BI GAGCTC 1 cut(s) 561
Psp5II RGGWCCY 1 cut(s) 488
Psp6I CCWGG 5 cut(s) 359, 667, 798, 810, 961
PspEI GGTNACC 1 cut(s) 710
PspGI CCWGG 5 cut(s) 359, 667, 798, 810, 961
PspN4I GGNNCC 5 cut(s) 95, 397, 489, 490, 930
PspPI GGNCC 3 cut(s) 286, 473, 488
PspPPI RGGWCCY 1 cut(s) 488
PstI CTGCAG 1 cut(s) 548
PsuI RGATCY 3 cut(s) 195, 395, 739
RsaI GTAC 1 cut(s) 930
RsaNI GTAC 1 cut(s) 929
SacI GAGCTC 1 cut(s) 561
SaqAI TTAA 1 cut(s) 33
SatI GCNGC 5 cut(s) 77, 122, 279, 501, 547
Sau3AI GATC 8 cut(s) 195, 395, 660, 690, 739, 885, 948, 1036
Sau96I GGNCC 3 cut(s) 286, 473, 488
SchI GAGTC 1 cut(s) 841
ScrFI CCNGG 8 cut(s) 98, 115, 361, 669, 800, 812, 912, 963
SduI GDGCHC 2 cut(s) 561, 686
SexAI ACCWGGT 2 cut(s) 667, 798
SfaNI GCATC 1 cut(s) 598
SfcI CTRYAG 1 cut(s) 544
SinI GGWCC 1 cut(s) 488
Sse9I AATT 3 cut(s) 532, 744, 976
SseBI AGGCCT 2 cut(s) 68, 161
SspMI CTAG 1 cut(s) 866
SstI GAGCTC 1 cut(s) 561
StuI AGGCCT 2 cut(s) 68, 161
StyD4I CCNGG 8 cut(s) 96, 113, 359, 667, 798, 810, 910, 961
TaaI ACNGT 2 cut(s) 637, 791
TaiI ACGT 5 cut(s) 171, 341, 353, 461, 603
TasI AATT 3 cut(s) 532, 744, 976
TauI GCSGC 3 cut(s) 79, 124, 281
TfiI GAWTC 3 cut(s) 730, 877, 984
Tru1I TTAA 1 cut(s) 33
Tru9I TTAA 1 cut(s) 33
TscAI CASTG 3 cut(s) 499, 828, 844
TseI GCWGC 2 cut(s) 500, 546
TspDTI ATGAA 2 cut(s) 599, 1053
TspGWI ACGGA 2 cut(s) 423, 889
TspRI CASTG 3 cut(s) 499, 828, 844
Van91I CCANNNNNTGG 1 cut(s) 90
VpaK11BI GGWCC 1 cut(s) 488
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 2 cut(s) 532, 976
XmiI GTMKAC 2 cut(s) 603, 756
XspI CTAG 1 cut(s) 866
ZraI GACGTC 2 cut(s) 169, 459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.